FFCP PHASE1:Hg19::chr16:11681245..11681271,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:11681245..11681271,- to FFCP PHASE1:Hg19::chr16:11681245..11681271,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9516 | |EntrezGene=9516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16841 | |HGNC=16841 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=50bp_to_NR_024320,uc002dbd.2_5end | |||
|cluster_id=chr16:11681245..11681271,- | |||
|description=CAGE_peak_4_at_LITAF_5end | |||
|id=chr16:11681245..11681271,- | |||
|ontology_enrichment_celltype=CL:0000766!5.33e-13!76;CL:0000557!4.76e-12!71;CL:0002009!4.90e-11!65;CL:0002194!1.44e-10!63;CL:0000576!1.44e-10!63;CL:0000040!1.44e-10!63;CL:0000559!1.44e-10!63;CL:0000839!1.89e-10!70;CL:0000860!4.00e-10!45;CL:0002057!1.32e-09!42;CL:0000738!8.37e-09!140;CL:0002077!2.16e-08!33;CL:0002076!9.17e-08!43;CL:0002031!1.75e-07!124;CL:0000763!1.86e-07!112;CL:0000049!1.86e-07!112;CL:0002087!4.76e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.79e-13;39!CL:0000234;3.79e-13;39!CL:0000860;4.69e-13;33!CL:0002057;4.69e-13;33!CL:0002077;3.86e-08;34!CL:0000576;6.51e-08;48!CL:0000766;4.97e-07;69!CL:0000148;9.58e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.48e-14,72;CL:0000473,1.81e-13,48;CL:0000234,1.81e-13,48;CL:0000557,7.38e-13,67;CL:0002009,8.60e-12,61;CL:0000839,2.66e-11,66;CL:0002194,3.18e-11,59;CL:0000576,3.18e-11,59;CL:0000040,3.18e-11,59;CL:0000559,3.18e-11,59;CL:0000860,6.50e-11,42;CL:0002057,6.50e-11,42;CL:0000763,1.29e-09,108;CL:0000049,1.29e-09,108;CL:0000066,1.39e-09,253;CL:0002077,2.06e-09,34;CL:0000738,1.13e-07,136;CL:0002076,1.14e-07,42;CL:0002031,9.38e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.59e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.73e-12!102;UBERON:0003061!8.73e-12!102;UBERON:0002371!4.30e-10!80;UBERON:0002193!1.40e-09!112;UBERON:0001474!2.37e-09!86;UBERON:0004765!1.08e-08!101;UBERON:0001434!1.08e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.85e-13,98;UBERON:0003061,1.85e-13,98;UBERON:0002193,1.26e-11,108;UBERON:0002371,4.80e-11,76;UBERON:0004765,2.65e-09,90;UBERON:0002405,5.32e-09,93;UBERON:0001474,5.80e-09,82;UBERON:0001434,1.72e-07,100 | |||
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| ||
|short_description=p4@LITAF | |||
}} | }} |
Latest revision as of 06:39, 20 September 2015
Short description: | p4@LITAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LITAF_5end |
Coexpression cluster: | NA |
Association with transcript: | 50bp_to_NR_024320, uc002dbd.2_5end |
EntrezGene: | LITAF |
HGNC: | 16841 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.48e-14 | 72 |
defensive cell | 1.81e-13 | 48 |
phagocyte | 1.81e-13 | 48 |
granulocyte monocyte progenitor cell | 7.38e-13 | 67 |
macrophage dendritic cell progenitor | 8.60e-12 | 61 |
myeloid lineage restricted progenitor cell | 2.66e-11 | 66 |
monopoietic cell | 3.18e-11 | 59 |
monocyte | 3.18e-11 | 59 |
monoblast | 3.18e-11 | 59 |
promonocyte | 3.18e-11 | 59 |
classical monocyte | 6.50e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.50e-11 | 42 |
myeloid cell | 1.29e-09 | 108 |
common myeloid progenitor | 1.29e-09 | 108 |
epithelial cell | 1.39e-09 | 253 |
ecto-epithelial cell | 2.06e-09 | 34 |
leukocyte | 1.13e-07 | 136 |
endo-epithelial cell | 1.14e-07 | 42 |
hematopoietic lineage restricted progenitor cell | 9.38e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.85e-13 | 98 |
blood island | 1.85e-13 | 98 |
hemolymphoid system | 1.26e-11 | 108 |
bone marrow | 4.80e-11 | 76 |
skeletal element | 2.65e-09 | 90 |
immune system | 5.32e-09 | 93 |
bone element | 5.80e-09 | 82 |
skeletal system | 1.72e-07 | 100 |