FFCP PHASE2:Hg19::chr5:133561752..133561791,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:5515,entrezgene:6500 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGN...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5515,6500 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9299,10899 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=E5RI56 | ||
|association_with_transcript=0bp_to_ENST00000231504,ENST00000519718_5end | |association_with_transcript=0bp_to_ENST00000231504,ENST00000519718_5end | ||
|cluster_id=chr5:133561752..133561791,- | |cluster_id=chr5:133561752..133561791,- |
Latest revision as of 08:48, 20 September 2015
Short description: | p1@PPP2CA, p2@SKP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPP2CA_5end, CAGE_peak_2_at_SKP1_5end |
Coexpression cluster: | C1210_CD14_Mast_immature_Eosinophils_Basophils_Neutrophils_CD34 |
Association with transcript: | 0bp_to_ENST00000231504, ENST00000519718_5end |
EntrezGene: | 5515,6500 |
HGNC: | 10899&submit=Submit 9299, 10899 |
UniProt: | E5RI56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@PPP2CAp2@SKP1 |
---|
0
100
200
300
400
500
600
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.53e-38 | 136 |
hematopoietic stem cell | 7.55e-33 | 168 |
hematopoietic lineage restricted progenitor cell | 6.10e-31 | 120 |
hematopoietic cell | 1.24e-30 | 177 |
hematopoietic oligopotent progenitor cell | 2.34e-30 | 161 |
hematopoietic multipotent progenitor cell | 2.34e-30 | 161 |
nongranular leukocyte | 5.74e-29 | 115 |
myeloid leukocyte | 1.23e-26 | 72 |
classical monocyte | 3.88e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.88e-25 | 42 |
Showing 1 to 10 of 25 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.52e-19 | 98 |
blood island | 2.52e-19 | 98 |
bone marrow | 2.01e-18 | 76 |
skeletal element | 1.11e-16 | 90 |
bone element | 1.25e-16 | 82 |
hemolymphoid system | 6.93e-15 | 108 |
skeletal system | 4.06e-14 | 100 |
immune system | 1.08e-13 | 93 |
Showing 1 to 8 of 8 entries