FFCP PHASE1:Hg19::chr22:38902300..38902322,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10521 | |EntrezGene=10521 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2740 | |HGNC=2740 | ||
|TSSclassifier=strong | |||
|UniProt=Q92841 | |UniProt=Q92841 | ||
|association_with_transcript=0bp_to_ENST00000403230,ENST00000479734_5end | |association_with_transcript=0bp_to_ENST00000403230,ENST00000479734_5end | ||
|cluster_id=chr22:38902300..38902322,- | |||
|coexpression_cluster_id=C1025 | |||
|description=CAGE_peak_1_at_DDX17_5end | |description=CAGE_peak_1_at_DDX17_5end | ||
|id=chr22:38902300..38902322,- | |id=chr22:38902300..38902322,- | ||
|ontology_enrichment_celltype=CL:0000738!3.87e-13!140;CL:0000037!1.65e-12!172;CL:0000566!1.65e-12!172;CL:0002032!2.01e-11!165;CL:0000837!2.01e-11!165;CL:0002031!1.19e-10!124;CL:0000988!1.53e-10!182;CL:0002087!8.92e-10!119;CL:0002057!7.18e-09!42;CL:0000860!6.28e-08!45;CL:0000766!1.38e-07!76;CL:0000763!2.77e-07!112;CL:0000049!2.77e-07!112;CL:0000557!6.60e-07!71;CL:0000839!8.92e-07!70 | |ontology_enrichment_celltype=CL:0000738!3.87e-13!140;CL:0000037!1.65e-12!172;CL:0000566!1.65e-12!172;CL:0002032!2.01e-11!165;CL:0000837!2.01e-11!165;CL:0002031!1.19e-10!124;CL:0000988!1.53e-10!182;CL:0002087!8.92e-10!119;CL:0002057!7.18e-09!42;CL:0000860!6.28e-08!45;CL:0000766!1.38e-07!76;CL:0000763!2.77e-07!112;CL:0000049!2.77e-07!112;CL:0000557!6.60e-07!71;CL:0000839!8.92e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-13;33!CL:0002057;1.36e-13;33!CL:0000473;1.63e-08;39!CL:0000234;1.63e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.44e-14,136;CL:0000037,4.72e-13,168;CL:0002032,6.03e-12,161;CL:0000837,6.03e-12,161;CL:0002031,2.90e-11,120;CL:0000988,2.97e-11,177;CL:0002087,2.28e-10,115;CL:0000860,7.18e-09,42;CL:0002057,7.18e-09,42;CL:0000766,2.92e-08,72;CL:0000763,9.05e-08,108;CL:0000049,9.05e-08,108;CL:0000557,1.45e-07,67;CL:0000839,1.98e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;6.36e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.18e-28!115;UBERON:0001049!2.65e-20!57;UBERON:0005068!2.65e-20!57;UBERON:0006241!2.65e-20!57;UBERON:0007135!2.65e-20!57;UBERON:0002616!4.22e-17!59;UBERON:0001017!2.51e-16!82;UBERON:0003080!2.91e-16!42;UBERON:0005743!2.97e-16!86;UBERON:0002780!6.94e-16!41;UBERON:0001890!6.94e-16!41;UBERON:0006240!6.94e-16!41;UBERON:0000073!7.75e-16!94;UBERON:0001016!7.75e-16!94;UBERON:0000955!4.46e-15!69;UBERON:0006238!4.46e-15!69;UBERON:0002020!1.58e-12!34;UBERON:0003528!1.58e-12!34;UBERON:0002791!2.12e-12!33;UBERON:0001893!2.17e-12!34;UBERON:0003075!1.31e-11!86;UBERON:0007284!1.31e-11!86;UBERON:0002346!1.35e-11!90;UBERON:0001869!3.13e-11!32;UBERON:0003056!4.18e-09!61;UBERON:0000956!9.87e-09!25;UBERON:0000203!9.87e-09!25;UBERON:0002619!1.01e-08!22;UBERON:0000153!1.63e-08!129;UBERON:0007811!1.63e-08!129;UBERON:0002390!3.01e-08!102;UBERON:0003061!3.01e-08!102;UBERON:0001950!5.09e-08!20;UBERON:0002193!3.17e-07!112;UBERON:0000033!3.93e-07!123;UBERON:0000924!9.62e-07!173;UBERON:0006601!9.62e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.29e-12;41!UBERON:0001890;7.29e-12;41!UBERON:0000073;4.47e-11;53!UBERON:0002616;4.47e-11;53!UBERON:0002791;9.01e-11;32!UBERON:0003528;9.25e-11;34!UBERON:0002020;9.25e-11;34!UBERON:0001893;1.30e-10;34!UBERON:0001869;2.93e-10;32!UBERON:0007023;6.99e-09;114!UBERON:0000956;1.02e-08;25!UBERON:0000203;1.02e-08;25!UBERON:0002619;1.02e-08;22!UBERON:0001950;5.15e-08;20!UBERON:0001017;9.23e-08;75!UBERON:0000955;2.20e-07;68!UBERON:0000922;2.36e-07;49!UBERON:0001016;5.89e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.99e-28,114;UBERON:0001049,6.46e-20,56;UBERON:0005068,6.46e-20,56;UBERON:0006241,6.46e-20,56;UBERON:0007135,6.46e-20,56;UBERON:0000073,2.71e-18,53;UBERON:0002616,2.71e-18,53;UBERON:0001017,5.70e-16,81;UBERON:0002780,6.94e-16,41;UBERON:0001890,6.94e-16,41;UBERON:0003080,6.94e-16,41;UBERON:0006240,6.94e-16,41;UBERON:0001016,1.63e-15,89;UBERON:0000955,1.02e-14,68;UBERON:0006238,1.02e-14,68;UBERON:0003075,5.49e-13,82;UBERON:0007284,5.49e-13,82;UBERON:0002346,6.26e-13,86;UBERON:0003528,1.58e-12,34;UBERON:0002020,1.58e-12,34;UBERON:0001893,2.17e-12,34;UBERON:0002791,7.74e-12,32;UBERON:0001869,3.13e-11,32;UBERON:0003056,2.93e-09,61;UBERON:0002390,7.95e-09,98;UBERON:0003061,7.95e-09,98;UBERON:0000956,9.87e-09,25;UBERON:0000203,9.87e-09,25;UBERON:0002619,1.01e-08,22;UBERON:0001950,5.09e-08,20;UBERON:0002193,1.04e-07,108;UBERON:0010371,1.85e-07,104;UBERON:0004121,8.58e-07,171;UBERON:0000924,8.58e-07,171;UBERON:0006601,8.58e-07,171 | |||
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| ||
|short_description=p1@DDX17 | |short_description=p1@DDX17 | ||
}} | }} |
Latest revision as of 15:56, 24 September 2015
Short description: | p1@DDX17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DDX17_5end |
Coexpression cluster: | C1025_Mast_lung_pineal_pituitary_cerebellum_Neutrophils_CD14 |
Association with transcript: | 0bp_to_ENST00000403230, ENST00000479734_5end |
EntrezGene: | DDX17 |
HGNC: | 2740 |
UniProt: | Q92841 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.44e-14 | 136 |
hematopoietic stem cell | 4.72e-13 | 168 |
hematopoietic oligopotent progenitor cell | 6.03e-12 | 161 |
hematopoietic multipotent progenitor cell | 6.03e-12 | 161 |
hematopoietic lineage restricted progenitor cell | 2.90e-11 | 120 |
hematopoietic cell | 2.97e-11 | 177 |
nongranular leukocyte | 2.28e-10 | 115 |
classical monocyte | 7.18e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.18e-09 | 42 |
myeloid leukocyte | 2.92e-08 | 72 |
myeloid cell | 9.05e-08 | 108 |
common myeloid progenitor | 9.05e-08 | 108 |
granulocyte monocyte progenitor cell | 1.45e-07 | 67 |
myeloid lineage restricted progenitor cell | 1.98e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.99e-28 | 114 |
neural tube | 6.46e-20 | 56 |
neural rod | 6.46e-20 | 56 |
future spinal cord | 6.46e-20 | 56 |
neural keel | 6.46e-20 | 56 |
regional part of nervous system | 2.71e-18 | 53 |
regional part of brain | 2.71e-18 | 53 |
central nervous system | 5.70e-16 | 81 |
regional part of forebrain | 6.94e-16 | 41 |
forebrain | 6.94e-16 | 41 |
anterior neural tube | 6.94e-16 | 41 |
future forebrain | 6.94e-16 | 41 |
nervous system | 1.63e-15 | 89 |
brain | 1.02e-14 | 68 |
future brain | 1.02e-14 | 68 |
neural plate | 5.49e-13 | 82 |
presumptive neural plate | 5.49e-13 | 82 |
neurectoderm | 6.26e-13 | 86 |
brain grey matter | 1.58e-12 | 34 |
gray matter | 1.58e-12 | 34 |
telencephalon | 2.17e-12 | 34 |
regional part of telencephalon | 7.74e-12 | 32 |
cerebral hemisphere | 3.13e-11 | 32 |
pre-chordal neural plate | 2.93e-09 | 61 |
hematopoietic system | 7.95e-09 | 98 |
blood island | 7.95e-09 | 98 |
cerebral cortex | 9.87e-09 | 25 |
pallium | 9.87e-09 | 25 |
regional part of cerebral cortex | 1.01e-08 | 22 |
neocortex | 5.09e-08 | 20 |
hemolymphoid system | 1.04e-07 | 108 |
ecto-epithelium | 1.85e-07 | 104 |
ectoderm-derived structure | 8.58e-07 | 171 |
ectoderm | 8.58e-07 | 171 |
presumptive ectoderm | 8.58e-07 | 171 |