FFCP PHASE1:Hg19::chr11:827285..827326,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283229 | |EntrezGene=283229 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28703 | |HGNC=28703 | ||
|TSSclassifier=strong | |||
|UniProt=E9PHZ8 | |UniProt=E9PHZ8 | ||
|association_with_transcript=0bp_to_ENST00000530183_5end | |association_with_transcript=0bp_to_ENST00000530183_5end | ||
|cluster_id=chr11:827285..827326,+ | |||
|coexpression_cluster_id=C1352 | |||
|description=CAGE_peak_3_at_EFCAB4A_5end | |description=CAGE_peak_3_at_EFCAB4A_5end | ||
|id=chr11:827285..827326,+ | |id=chr11:827285..827326,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000945;7.37e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.54e-07,24;CL:0000826,7.54e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.56e-14!106;DOID:0050687!3.24e-09!143 | |ontology_enrichment_disease=DOID:305!1.56e-14!106;DOID:0050687!3.24e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:299;3.58e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.95e-10,106;DOID:299,3.13e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.88e-12!115;UBERON:0004921!6.48e-09!129;UBERON:0004185!6.48e-09!129;UBERON:0005409!4.93e-07!35;UBERON:0001007!7.07e-07!155;UBERON:0001555!7.07e-07!155;UBERON:0007026!7.07e-07!155;UBERON:0000058!8.96e-07!26 | |ontology_enrichment_uberon=UBERON:0007023!8.88e-12!115;UBERON:0004921!6.48e-09!129;UBERON:0004185!6.48e-09!129;UBERON:0005409!4.93e-07!35;UBERON:0001007!7.07e-07!155;UBERON:0001555!7.07e-07!155;UBERON:0007026!7.07e-07!155;UBERON:0000058!8.96e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.62e-10;33!UBERON:0005409;3.60e-10;22!UBERON:0000160;8.52e-08;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.85e-12,118;UBERON:0005177,3.70e-10,101;UBERON:0005409,2.02e-09,25;UBERON:0001007,5.38e-09,145;UBERON:0001555,5.38e-09,145;UBERON:0007026,5.38e-09,145;UBERON:0007023,3.41e-08,114;UBERON:0000160,8.35e-08,17;UBERON:0001041,5.95e-07,87;UBERON:0009569,7.01e-07,112;UBERON:0002113,7.60e-07,26;UBERON:0003918,7.60e-07,26;UBERON:0011143,7.60e-07,26;UBERON:0005095,7.60e-07,26;UBERON:0007687,7.60e-07,26;UBERON:0004119,8.41e-07,160;UBERON:0000925,8.41e-07,160;UBERON:0006595,8.41e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,5.58240934377942,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.684372125364421,0.125542639594803,1.37544130346312,1.55991119954897,2.2826126580967,0,0.383829398097213,0.77408061658038,0,0,0,0,0,0.293600439334847,0,0,0.434021741431704,0,0,0.257575567634187,0.581592955118259,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0.309706370895104,0.28769239232215,0.768482119587302,0.47296445977717,0.344745680736619,0,0,0,0,0.449446968890169,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0,0.870627715885752,0,0.622822248995575,0.502497330513487,0.521482918420201,0.434377689410233,3.63239701580021,0.368277635987565,0,0,0.212604299965044,0,0.22465726229299,0.300353785683013,0.32145117339416,0,0.19891667719909,0,3.51992488922645,3.82297027883492,0,1.28019066769952,0.800791974072025,0.574752439954483,3.30522436392431,0,2.84606484554724,1.17447437874188,4.20500550937752,0,0,0,0,0,0.205601498999509,2.50779743086017,0,0,0,1.55974639639243,0.294605907474837,0.221533894583621,0,1.28091319725675,1.04047478047903,2.95988228286617,3.03985019564433,3.18783394308558,0,0,0,1.35971211237079,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.43917392846563,1.89919659471683,0,0,0.97364218096405,0.348259474598534,0.531831842075461,1.43094374583205,1.14398982156026,0.371457501329565,0,0,1.04142150482278,0.56530794192401,0,0.825354125820202,0.208994966536811,1.55050055501597,2.49036383880697,2.34304428935269,2.41697590265488,0.760272105718513,4.63717909341522,1.47065232138347,0.81014194788176,0.535798369704479,1.57170560838319,1.0135033243499,0,0,0.366403487860815,0,3.87780264148325,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,1.32529768321485,0.464775771478074,0.829288440122964,0.504641701751257,0.36497735907583,0,0,0,0,0,1.18306800039844,1.34867752062481,0.723033089650446,0.992645754591546,0.871517776369625,0.949082476444386,0.404493924480493,0.196221465125346,0.38474715694639,2.21446636387394,0,0,0,0,0,0,0,2.21379189377604,0,0,0,0,0,0,0,1.44331342025273,0.463721619900307,0,0.866198686566443,0.462985512576611,0.380508304469197,0.790204397959275,2.57545848628462,0.246217006087397,0,0.891786973732369,0,0,0,0,0,0,0,0.44024217006613,0.621984346622316,0.576479813667846,1.51490920111656,0,0,0,0,0,0.300343057843917,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59549090373462,0.394061520403854,0,0.385029108839245,0.254094624222463,0,0,0,0,2.24702107184155,5.9832291840805,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.206768026122887,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,1.57117284469109,0,0.368323955743585,0,0,0,7.21919380651859,1.61732207919271,4.70609861506113,0,1.16106791782163,0,0.680374821106063,0.647747748306418,4.62681758070868,0.541892875087706,3.01013864312912,4.07802036872061,5.81753206250107,1.34324852833307,0.219259876645935,0.261435451024901,0.256450125116389,1.64007322849853,0.976135183992909,1.64865618636356,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0,0,0.170453254832202,0.267096106940212,0,0.192190067365106,0.255225424989168,0.910420027699949,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0.443430153536676,0,1.52234282769651,0,1.70894156152249,0.714695326373367,2.46817363851717,2.59389324477087,1.08006287447623,0,1.38871292465715,0,2.45040215981032,4.08766985276581,0.144269212976445,2.56110636054291,0,0.199579371432817,0,0.211673582723883,0,3.08876895924805,0,1.25343916618419,7.51903431270201,0,0.321176150207399,0.201799707191048,0,1.03051603426729,0.921722292925374,1.56573275524691,1.83534055883099,0.781552381608161,0.278406173895242,0,0,6.32836739195858,0,21.3340216065371,0.73254089635947,0,2.89752799121444,0,0,0.593929361665277,0,0,0.281338832821026,0,0,0,3.98495976502139,7.18338180380984,7.55798243562828,0,1.72318727645497,0,2.42644548097782,8.23497403507802,0,1.57829449019094,0,0,0,0.0927680981618513,0,4.16684417736373,6.0347399997375,2.17499872630438,0.341380344856499,2.54253650292766,2.6002644994473,0.344743373241465,0,0.173624994933292,0,0.361789315876224,0,0.331737779793674,0.295547618953547,0.219385397153973,0.32681539055697,0.975966209950223,1.30815439456455,0.113942055847001,0.922255617552241,2.15418346583453,1.19512109114209,0.957003479195758,0.274792780205587,0,0,0.627921025580099,1.16348177330109,2.25595660617181,3.72518815203705,3.02078856556517,3.60532092175952,0.476809736941136,0,0.652931232636591,2.54435528581093,0,20.9005005526486,9.64187453086397,17.7198742030751,0.889563386041866,1.23563938946503,1.35748534357092,0.404406797884062,3.21031058919516,0.234264445725339,1.82454789215666,0,0,8.2862724598372,20.5684217282729,0,0.379119477770928,3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| ||
|short_description=p3@EFCAB4A | |short_description=p3@EFCAB4A | ||
}} | }} |
Latest revision as of 18:20, 24 September 2015
Short description: | p3@EFCAB4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EFCAB4A_5end |
Coexpression cluster: | C1352_pancreas_salivary_small_submaxillary_parotid_nonsmall_smallcell |
Association with transcript: | 0bp_to_ENST00000530183_5end |
EntrezGene: | EFCAB4A |
HGNC: | 28703 |
UniProt: | E9PHZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.54e-07 | 24 |
pro-B cell | 7.54e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 1.85e-12 | 118 |
trunk region element | 3.70e-10 | 101 |
gastrointestinal system | 2.02e-09 | 25 |
digestive system | 5.38e-09 | 145 |
digestive tract | 5.38e-09 | 145 |
primitive gut | 5.38e-09 | 145 |
adult organism | 3.41e-08 | 114 |
intestine | 8.35e-08 | 17 |
foregut | 5.95e-07 | 87 |
subdivision of trunk | 7.01e-07 | 112 |
kidney | 7.60e-07 | 26 |
kidney mesenchyme | 7.60e-07 | 26 |
upper urinary tract | 7.60e-07 | 26 |
kidney rudiment | 7.60e-07 | 26 |
kidney field | 7.60e-07 | 26 |
endoderm-derived structure | 8.41e-07 | 160 |
endoderm | 8.41e-07 | 160 |
presumptive endoderm | 8.41e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.95e-10 | 106 |
adenocarcinoma | 3.13e-08 | 25 |