FFCP PHASE1:Hg19::chr2:219824410..219824417,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:219824410..219824417,+ to FFCP PHASE1:Hg19::chr2:219824410..219824417,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8941 | |EntrezGene=8941 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1776 | |HGNC=1776 | ||
|TSSclassifier=strong | |||
|UniProt=Q13319,Q5XKD4 | |UniProt=Q13319,Q5XKD4 | ||
|association_with_transcript=12bp_to_NM_003936,uc002vjf.2_5end | |||
|cluster_id=chr2:219824410..219824417,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_CDK5R2_5end | |||
|id=chr2:219824410..219824417,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.05e-10;2!CL:0000242;2.05e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.83e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.20e-16;82!UBERON:0006238;8.29e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.38e-77!57;UBERON:0005068!5.38e-77!57;UBERON:0006241!5.38e-77!57;UBERON:0007135!5.38e-77!57;UBERON:0002780!1.20e-72!41;UBERON:0001890!1.20e-72!41;UBERON:0006240!1.20e-72!41;UBERON:0001017!1.68e-72!82;UBERON:0005743!2.86e-71!86;UBERON:0000073!8.93e-71!94;UBERON:0001016!8.93e-71!94;UBERON:0003080!1.14e-70!42;UBERON:0000955!1.00e-69!69;UBERON:0006238!1.00e-69!69;UBERON:0002616!1.47e-67!59;UBERON:0003075!1.62e-60!86;UBERON:0007284!1.62e-60!86;UBERON:0001893!3.82e-58!34;UBERON:0002346!3.73e-57!90;UBERON:0002791!6.67e-56!33;UBERON:0003056!8.93e-56!61;UBERON:0001869!7.42e-55!32;UBERON:0002020!2.74e-54!34;UBERON:0003528!2.74e-54!34;UBERON:0002619!3.08e-47!22;UBERON:0001950!1.80e-43!20;UBERON:0000033!3.48e-41!123;UBERON:0004121!4.65e-41!169;UBERON:0000956!6.12e-41!25;UBERON:0000203!6.12e-41!25;UBERON:0000924!1.04e-39!173;UBERON:0006601!1.04e-39!173;UBERON:0000153!1.47e-38!129;UBERON:0007811!1.47e-38!129;UBERON:0007023!4.14e-38!115;UBERON:0002420!7.91e-19!9;UBERON:0007245!7.91e-19!9;UBERON:0010009!7.91e-19!9;UBERON:0010011!7.91e-19!9;UBERON:0000454!7.91e-19!9;UBERON:0000025!1.30e-18!194;UBERON:0001871!1.00e-17!7;UBERON:0001894!1.36e-15!7;UBERON:0006222!1.36e-15!7;UBERON:0009663!1.25e-14!7;UBERON:0002308!1.64e-14!9;UBERON:0000125!1.64e-14!9;UBERON:0000200!9.09e-14!6;UBERON:0000483!3.25e-13!309;UBERON:0000119!6.23e-13!312;UBERON:0004111!6.30e-13!241;UBERON:0000064!7.34e-13!219;UBERON:0000349!1.01e-11!5;UBERON:0002021!2.28e-11!5;UBERON:0001872!2.89e-11!5;UBERON:0000475!4.38e-11!365;UBERON:0003296!2.88e-10!4;UBERON:0010133!2.88e-10!4;UBERON:0000477!6.18e-10!286;UBERON:0003076!1.00e-09!15;UBERON:0003057!1.00e-09!15;UBERON:0000369!1.58e-09!4;UBERON:0002435!1.58e-09!4;UBERON:0000204!1.58e-09!4;UBERON:0010082!1.58e-09!4;UBERON:0000062!7.27e-09!511;UBERON:0004733!9.79e-08!12;UBERON:0002028!9.79e-08!12;UBERON:0007277!9.79e-08!12;UBERON:0000481!1.79e-07!347;UBERON:0000922!2.01e-07!612;UBERON:0005383!2.26e-07!3;UBERON:0005382!2.26e-07!3;UBERON:0002771!2.36e-07!3;UBERON:0000923!3.12e-07!604;UBERON:0005291!3.12e-07!604;UBERON:0006598!3.12e-07!604;UBERON:0002532!3.12e-07!604;UBERON:0002050!3.47e-07!605;UBERON:0005423!3.47e-07!605;UBERON:0004732!4.68e-07!13;UBERON:0000467!7.75e-07!625;UBERON:0000480!8.58e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.16e-47;32!UBERON:0003528;2.03e-44;34!UBERON:0002020;2.03e-44;34!UBERON:0002791;5.49e-44;32!UBERON:0002780;2.33e-43;41!UBERON:0001890;2.33e-43;41!UBERON:0001893;2.46e-42;34!UBERON:0002619;4.15e-42;22!UBERON:0001950;2.22e-40;20!UBERON:0000956;7.48e-37;25!UBERON:0000203;7.48e-37;25!UBERON:0000073;1.54e-30;53!UBERON:0002616;1.54e-30;53!UBERON:0000955;2.60e-30;68!UBERON:0001017;1.06e-24;75!UBERON:0001871;2.14e-23;6!UBERON:0001016;1.61e-21;83!UBERON:0003296;1.74e-19;4!UBERON:0010133;1.74e-19;4!UBERON:0002420;1.39e-17;9!UBERON:0007245;1.39e-17;9!UBERON:0010009;1.39e-17;9!UBERON:0010011;1.39e-17;9!UBERON:0000454;1.39e-17;9!UBERON:0001894;5.91e-17;7!UBERON:0000349;3.32e-15;5!UBERON:0000200;8.65e-13;6!UBERON:0000125;3.57e-12;9!UBERON:0002308;3.57e-12;9!UBERON:0007023;1.07e-11;114!UBERON:0001905;8.14e-11;2!UBERON:0002757;8.14e-11;2!UBERON:0010134;8.14e-11;2!UBERON:0005408;8.14e-11;2!UBERON:0001899;8.14e-11;2!UBERON:0000369;9.84e-11;4!UBERON:0002435;9.84e-11;4!UBERON:0000204;9.84e-11;4!UBERON:0000007;2.05e-10;2!UBERON:0009663;2.08e-10;7!UBERON:0001876;2.72e-10;2!UBERON:0002021;6.87e-09;5!UBERON:0011216;3.77e-08;132!UBERON:0010314;5.18e-07;132!UBERON:0001870;5.69e-07;3!UBERON:0000988;7.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,2.27e-63,41;UBERON:0001890,2.27e-63,41;UBERON:0003080,2.27e-63,41;UBERON:0006240,2.27e-63,41;UBERON:0000073,1.03e-60,53;UBERON:0002616,1.03e-60,53;UBERON:0000955,1.71e-60,68;UBERON:0006238,1.71e-60,68;UBERON:0001049,3.53e-57,56;UBERON:0005068,3.53e-57,56;UBERON:0006241,3.53e-57,56;UBERON:0007135,3.53e-57,56;UBERON:0001017,7.38e-57,81;UBERON:0001869,2.52e-51,32;UBERON:0001016,1.40e-50,89;UBERON:0001893,4.05e-48,34;UBERON:0003056,4.13e-48,61;UBERON:0003528,9.31e-48,34;UBERON:0002020,9.31e-48,34;UBERON:0002791,5.84e-46,32;UBERON:0003075,4.01e-43,82;UBERON:0007284,4.01e-43,82;UBERON:0002619,3.86e-42,22;UBERON:0002346,7.90e-41,86;UBERON:0001950,1.98e-40,20;UBERON:0010371,6.98e-38,104;UBERON:0000956,7.03e-37,25;UBERON:0000203,7.03e-37,25;UBERON:0007023,1.12e-29,114;UBERON:0004121,1.37e-28,171;UBERON:0000924,1.37e-28,171;UBERON:0006601,1.37e-28,171;UBERON:0010314,3.10e-26,132;UBERON:0001871,2.28e-23,6;UBERON:0003296,2.26e-19,4;UBERON:0010133,2.26e-19,4;UBERON:0011216,9.96e-19,223;UBERON:0002420,1.13e-17,9;UBERON:0007245,1.13e-17,9;UBERON:0010009,1.13e-17,9;UBERON:0010011,1.13e-17,9;UBERON:0000454,1.13e-17,9;UBERON:0001894,6.65e-17,7;UBERON:0006222,6.65e-17,7;UBERON:0000349,3.21e-15,5;UBERON:0000025,1.30e-13,192;UBERON:0000200,7.32e-13,6;UBERON:0000125,3.75e-12,9;UBERON:0002308,3.75e-12,9;UBERON:0001905,8.15e-11,2;UBERON:0002757,8.15e-11,2;UBERON:0010134,8.15e-11,2;UBERON:0005408,8.15e-11,2;UBERON:0001899,8.15e-11,2;UBERON:0000369,1.17e-10,4;UBERON:0002435,1.17e-10,4;UBERON:0000204,1.17e-10,4;UBERON:0010082,1.17e-10,4;UBERON:0009663,2.00e-10,7;UBERON:0001876,2.11e-10,2;UBERON:0000007,2.66e-10,2;UBERON:0004111,1.28e-09,240;UBERON:0000483,3.55e-09,306;UBERON:0000119,5.11e-09,309;UBERON:0002021,6.69e-09,5;UBERON:0001870,4.82e-07,3;UBERON:0000988,8.05e-07,3 | |||
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| ||
|short_description=p2@CDK5R2 | |||
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Latest revision as of 18:54, 24 September 2015
Short description: | p2@CDK5R2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDK5R2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 12bp_to_NM_003936, uc002vjf.2_5end |
EntrezGene: | CDK5R2 |
HGNC: | 1776 |
UniProt: | Q13319Q5XKD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.83e-10 | 2 |