FFCP PHASE1:Hg19::chr18:76829385..76829438,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:76829385..76829438,+ to FFCP PHASE1:Hg19::chr18:76829385..76829438,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=374868 | |EntrezGene=374868 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13541 | |HGNC=13541 | ||
|TSSclassifier=strong | |||
|UniProt=O43861,A6NH10,F2Z2D8,F5H3M8,B3KSI8,Q69YZ7,Q7Z3J4,Q7Z6L4 | |UniProt=O43861,A6NH10,F2Z2D8,F5H3M8,B3KSI8,Q69YZ7,Q7Z3J4,Q7Z6L4 | ||
|association_with_transcript=0bp_to_ENST00000307671,ENST00000359184,ENST00000426216,ENST00000490210,ENST00000542323,NM_198531,uc002lmu.2,uc002lmv.1,uc002lmw.1,uc002lmx.2_5end | |||
|cluster_id=chr18:76829385..76829438,+ | |||
|coexpression_cluster_id=C723 | |||
|description=CAGE_peak_1_at_ATP9B_5end | |||
|id=chr18:76829385..76829438,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.47e-44!140;CL:0000037!3.40e-43!172;CL:0000566!3.40e-43!172;CL:0000988!1.84e-39!182;CL:0002032!2.09e-39!165;CL:0000837!2.09e-39!165;CL:0002031!5.91e-35!124;CL:0002087!1.50e-33!119;CL:0000766!3.78e-28!76;CL:0000763!7.08e-28!112;CL:0000049!7.08e-28!112;CL:0000557!4.20e-25!71;CL:0002057!1.43e-24!42;CL:0000839!5.36e-24!70;CL:0002009!6.48e-23!65;CL:0002194!5.18e-22!63;CL:0000576!5.18e-22!63;CL:0000040!5.18e-22!63;CL:0000559!5.18e-22!63;CL:0000860!2.08e-20!45;CL:0000542!2.45e-10!53;CL:0000051!2.45e-10!53;CL:0000838!2.69e-10!52;CL:0000791!4.23e-10!18;CL:0000789!4.23e-10!18;CL:0002420!4.23e-10!18;CL:0002419!4.23e-10!18;CL:0000790!4.23e-10!18;CL:0000084!9.03e-09!25;CL:0000827!9.03e-09!25;CL:0000134!2.07e-08!358;CL:0002320!4.46e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.34e-18;33!CL:0002057;3.34e-18;33!CL:0000473;9.55e-18;39!CL:0000234;9.55e-18;39!CL:0000576;1.91e-15;48!CL:0000766;4.19e-14;69!CL:0002087;1.20e-10;104!CL:0000738;2.58e-10;136!CL:0000791;3.99e-10;18!CL:0000789;3.99e-10;18!CL:0002419;3.99e-10;18!CL:0000084;6.50e-09;25!CL:0000763;8.11e-09;100!CL:0000988;1.14e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.35e-47,136;CL:0000037,2.24e-46,168;CL:0000988,4.12e-43,177;CL:0002032,1.74e-42,161;CL:0000837,1.74e-42,161;CL:0002031,2.17e-38,120;CL:0002087,5.48e-37,115;CL:0000766,2.62e-32,72;CL:0000763,4.82e-31,108;CL:0000049,4.82e-31,108;CL:0000557,3.87e-29,67;CL:0000839,5.99e-28,66;CL:0000473,1.94e-27,48;CL:0000234,1.94e-27,48;CL:0002009,5.95e-27,61;CL:0002194,5.00e-26,59;CL:0000576,5.00e-26,59;CL:0000040,5.00e-26,59;CL:0000559,5.00e-26,59;CL:0000860,1.43e-24,42;CL:0002057,1.43e-24,42;CL:0000542,2.45e-10,53;CL:0000051,2.45e-10,53;CL:0000838,2.69e-10,52;CL:0000791,4.23e-10,18;CL:0000789,4.23e-10,18;CL:0002420,4.23e-10,18;CL:0002419,4.23e-10,18;CL:0000790,4.23e-10,18;CL:0000134,2.21e-09,354;CL:0002320,5.09e-09,361;CL:0000084,9.03e-09,25;CL:0000827,9.03e-09,25;CL:0000219,4.30e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;4.93e-18;42!CL:0000790;3.99e-10;18!CL:0000049;6.65e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.26e-25!102;UBERON:0003061!5.26e-25!102;UBERON:0002193!2.47e-23!112;UBERON:0002371!4.68e-20!80;UBERON:0001474!4.74e-18!86;UBERON:0002405!1.77e-16!115;UBERON:0007023!1.82e-16!115;UBERON:0004765!3.51e-14!101;UBERON:0001434!3.51e-14!101;UBERON:0002384!2.70e-07!375;UBERON:0001049!3.08e-07!57;UBERON:0005068!3.08e-07!57;UBERON:0006241!3.08e-07!57;UBERON:0007135!3.08e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.85e-28,98;UBERON:0003061,3.85e-28,98;UBERON:0002193,3.76e-26,108;UBERON:0002371,3.05e-23,76;UBERON:0002405,4.39e-23,93;UBERON:0001474,7.05e-21,82;UBERON:0004765,3.08e-18,90;UBERON:0007023,2.53e-16,114;UBERON:0001434,6.04e-16,100;UBERON:0002384,3.55e-08,371;UBERON:0001049,2.64e-07,56;UBERON:0005068,2.64e-07,56;UBERON:0006241,2.64e-07,56;UBERON:0007135,2.64e-07,56;UBERON:0003081,4.67e-07,203 | |||
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| ||
|short_description=p1@ATP9B | |||
}} | }} |
Latest revision as of 19:19, 24 September 2015
Short description: | p1@ATP9B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATP9B_5end |
Coexpression cluster: | C723_CD14_CD4_Eosinophils_CD8_Natural_Neutrophils_CD19 |
Association with transcript: | 0bp_to_ENST00000307671, ENST00000359184, ENST00000426216, ENST00000490210, ENST00000542323, NM_198531, uc002lmu.2, uc002lmv.1, uc002lmw.1, uc002lmx.2_5end |
EntrezGene: | ATP9B |
HGNC: | 13541 |
UniProt: | O43861A6NH10F2Z2D8F5H3M8B3KSI8Q69YZ7Q7Z3J4Q7Z6L4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.85e-28 | 98 |
blood island | 3.85e-28 | 98 |
hemolymphoid system | 3.76e-26 | 108 |
bone marrow | 3.05e-23 | 76 |
immune system | 4.39e-23 | 93 |
bone element | 7.05e-21 | 82 |
skeletal element | 3.08e-18 | 90 |
adult organism | 2.53e-16 | 114 |
skeletal system | 6.04e-16 | 100 |
connective tissue | 3.55e-08 | 371 |
neural tube | 2.64e-07 | 56 |
neural rod | 2.64e-07 | 56 |
future spinal cord | 2.64e-07 | 56 |
neural keel | 2.64e-07 | 56 |
lateral plate mesoderm | 4.67e-07 | 203 |