FFCP PHASE1:Hg19::chr6:13272491..13272542,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221692 | |EntrezGene=221692 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20990 | |HGNC=20990 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=47bp_to_ENST00000489548_5end | |association_with_transcript=47bp_to_ENST00000489548_5end | ||
|cluster_id=chr6:13272491..13272542,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_10_at_PHACTR1_5end | |description=CAGE_peak_10_at_PHACTR1_5end | ||
|id=chr6:13272491..13272542,+ | |id=chr6:13272491..13272542,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.77e-79!42;CL:0000860!2.03e-73!45;CL:0000738!1.42e-62!140;CL:0000766!3.21e-61!76;CL:0002009!1.28e-60!65;CL:0000557!3.29e-57!71;CL:0002194!1.28e-56!63;CL:0000576!1.28e-56!63;CL:0000040!1.28e-56!63;CL:0000559!1.28e-56!63;CL:0000839!1.96e-52!70;CL:0000763!1.04e-49!112;CL:0000049!1.04e-49!112;CL:0000037!1.04e-49!172;CL:0000566!1.04e-49!172;CL:0002087!8.10e-48!119;CL:0000988!4.42e-46!182;CL:0002032!3.41e-45!165;CL:0000837!3.41e-45!165;CL:0002031!2.52e-43!124;CL:0000219!1.45e-15!390;CL:0000134!2.06e-15!358;CL:0002320!8.29e-15!365;CL:0000453!3.20e-12!5;CL:0000034!1.50e-10!444;CL:0000048!3.62e-10!430;CL:0000723!8.20e-10!436;CL:0000767!3.22e-08!3;CL:0000842!7.80e-08!3;CL:0000094!9.90e-08!8;CL:0000451!2.11e-07!10;CL:0002393!7.09e-07!9;CL:0002397!7.09e-07!9 | |ontology_enrichment_celltype=CL:0002057!1.77e-79!42;CL:0000860!2.03e-73!45;CL:0000738!1.42e-62!140;CL:0000766!3.21e-61!76;CL:0002009!1.28e-60!65;CL:0000557!3.29e-57!71;CL:0002194!1.28e-56!63;CL:0000576!1.28e-56!63;CL:0000040!1.28e-56!63;CL:0000559!1.28e-56!63;CL:0000839!1.96e-52!70;CL:0000763!1.04e-49!112;CL:0000049!1.04e-49!112;CL:0000037!1.04e-49!172;CL:0000566!1.04e-49!172;CL:0002087!8.10e-48!119;CL:0000988!4.42e-46!182;CL:0002032!3.41e-45!165;CL:0000837!3.41e-45!165;CL:0002031!2.52e-43!124;CL:0000219!1.45e-15!390;CL:0000134!2.06e-15!358;CL:0002320!8.29e-15!365;CL:0000453!3.20e-12!5;CL:0000034!1.50e-10!444;CL:0000048!3.62e-10!430;CL:0000723!8.20e-10!436;CL:0000767!3.22e-08!3;CL:0000842!7.80e-08!3;CL:0000094!9.90e-08!8;CL:0000451!2.11e-07!10;CL:0002393!7.09e-07!9;CL:0002397!7.09e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.58e-111;33!CL:0002057;1.58e-111;33!CL:0000473;7.97e-77;39!CL:0000234;7.97e-77;39!CL:0000576;8.12e-62;48!CL:0000766;1.18e-41;69!CL:0000763;5.57e-19;100!CL:0002087;3.18e-17;104!CL:0000738;2.27e-14;136!CL:0000767;1.58e-13;3!CL:0000094;2.66e-13;8!CL:0000081;1.28e-09;11!CL:0002393;2.83e-07;6!CL:0002397;2.83e-07;6!CL:0000988;3.44e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.03e-115,42;CL:0002057,3.03e-115,42;CL:0000473,6.03e-100,48;CL:0000234,6.03e-100,48;CL:0000766,1.55e-84,72;CL:0002009,1.63e-80,61;CL:0002194,1.61e-78,59;CL:0000576,1.61e-78,59;CL:0000040,1.61e-78,59;CL:0000559,1.61e-78,59;CL:0000557,9.15e-73,67;CL:0000839,1.46e-69,66;CL:0000763,2.18e-60,108;CL:0000049,2.18e-60,108;CL:0000738,1.33e-54,136;CL:0002087,5.80e-45,115;CL:0002031,9.12e-43,120;CL:0000037,9.51e-43,168;CL:0002032,1.37e-42,161;CL:0000837,1.37e-42,161;CL:0000988,3.51e-40,177;CL:0000134,4.65e-16,354;CL:0002320,1.38e-15,361;CL:0000219,6.35e-14,386;CL:0000767,1.93e-13,3;CL:0000094,3.01e-13,8;CL:0000034,4.10e-12,441;CL:0000048,6.92e-12,427;CL:0000723,1.32e-11,433;CL:0000081,1.40e-09,11 | |||
|ontology_enrichment_development_v019=CL:0002057;9.18e-85;42!CL:0000049;4.26e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.90e-49!80;UBERON:0001474!3.60e-45!86;UBERON:0002390!3.34e-42!102;UBERON:0003061!3.34e-42!102;UBERON:0002193!4.45e-39!112;UBERON:0004765!1.08e-36!101;UBERON:0001434!1.08e-36!101;UBERON:0002405!2.33e-32!115;UBERON:0002204!1.47e-18!167;UBERON:0003081!2.75e-14!216;UBERON:0002384!5.51e-14!375 | |ontology_enrichment_uberon=UBERON:0002371!1.90e-49!80;UBERON:0001474!3.60e-45!86;UBERON:0002390!3.34e-42!102;UBERON:0003061!3.34e-42!102;UBERON:0002193!4.45e-39!112;UBERON:0004765!1.08e-36!101;UBERON:0001434!1.08e-36!101;UBERON:0002405!2.33e-32!115;UBERON:0002204!1.47e-18!167;UBERON:0003081!2.75e-14!216;UBERON:0002384!5.51e-14!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.11e-63,76;UBERON:0001474,2.75e-58,82;UBERON:0004765,1.63e-52,90;UBERON:0002390,9.66e-51,98;UBERON:0003061,9.66e-51,98;UBERON:0002405,1.33e-50,93;UBERON:0001434,1.39e-46,100;UBERON:0002193,2.13e-45,108;UBERON:0002204,4.83e-25,167;UBERON:0003081,9.80e-21,203;UBERON:0002384,6.07e-15,371;UBERON:0000926,1.08e-10,315;UBERON:0004120,1.08e-10,315;UBERON:0006603,1.08e-10,315 | |||
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| ||
|short_description=p10@PHACTR1 | |short_description=p10@PHACTR1 | ||
}} | }} |
Latest revision as of 19:34, 24 September 2015
Short description: | p10@PHACTR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PHACTR1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 47bp_to_ENST00000489548_5end |
EntrezGene: | PHACTR1 |
HGNC: | 20990 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.03e-115 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.03e-115 | 42 |
defensive cell | 6.03e-100 | 48 |
phagocyte | 6.03e-100 | 48 |
myeloid leukocyte | 1.55e-84 | 72 |
macrophage dendritic cell progenitor | 1.63e-80 | 61 |
monopoietic cell | 1.61e-78 | 59 |
monocyte | 1.61e-78 | 59 |
monoblast | 1.61e-78 | 59 |
promonocyte | 1.61e-78 | 59 |
granulocyte monocyte progenitor cell | 9.15e-73 | 67 |
myeloid lineage restricted progenitor cell | 1.46e-69 | 66 |
myeloid cell | 2.18e-60 | 108 |
common myeloid progenitor | 2.18e-60 | 108 |
leukocyte | 1.33e-54 | 136 |
nongranular leukocyte | 5.80e-45 | 115 |
hematopoietic lineage restricted progenitor cell | 9.12e-43 | 120 |
hematopoietic stem cell | 9.51e-43 | 168 |
hematopoietic oligopotent progenitor cell | 1.37e-42 | 161 |
hematopoietic multipotent progenitor cell | 1.37e-42 | 161 |
hematopoietic cell | 3.51e-40 | 177 |
mesenchymal cell | 4.65e-16 | 354 |
connective tissue cell | 1.38e-15 | 361 |
motile cell | 6.35e-14 | 386 |
basophil | 1.93e-13 | 3 |
granulocyte | 3.01e-13 | 8 |
stem cell | 4.10e-12 | 441 |
multi fate stem cell | 6.92e-12 | 427 |
somatic stem cell | 1.32e-11 | 433 |
blood cell | 1.40e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.11e-63 | 76 |
bone element | 2.75e-58 | 82 |
skeletal element | 1.63e-52 | 90 |
hematopoietic system | 9.66e-51 | 98 |
blood island | 9.66e-51 | 98 |
immune system | 1.33e-50 | 93 |
skeletal system | 1.39e-46 | 100 |
hemolymphoid system | 2.13e-45 | 108 |
musculoskeletal system | 4.83e-25 | 167 |
lateral plate mesoderm | 9.80e-21 | 203 |
connective tissue | 6.07e-15 | 371 |
mesoderm | 1.08e-10 | 315 |
mesoderm-derived structure | 1.08e-10 | 315 |
presumptive mesoderm | 1.08e-10 | 315 |