FFCP PHASE1:Hg19::chr22:40440380..40440391,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:40440380..40440391,+
|short_description=p8@TNRC6B
|description=CAGE_peak_8_at_TNRC6B_5end
|association_with_transcript=-429bp_to_ENST00000301923,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23112 | |EntrezGene=23112 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29190 | |HGNC=29190 | ||
|TSSclassifier=strong | |||
|UniProt=B0QYM5,Q9UPQ9 | |UniProt=B0QYM5,Q9UPQ9 | ||
|association_with_transcript=-429bp_to_ENST00000301923,ENST00000441751,NM_001024843,uc003aym.2_5end | |||
|cluster_id=chr22:40440380..40440391,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_8_at_TNRC6B_5end | |||
|id=chr22:40440380..40440391,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.61e-23!140;CL:0000988!1.65e-22!182;CL:0000860!1.27e-21!45;CL:0000037!3.82e-21!172;CL:0000566!3.82e-21!172;CL:0002031!2.78e-20!124;CL:0002057!2.84e-19!42;CL:0002087!3.78e-19!119;CL:0002032!6.35e-19!165;CL:0000837!6.35e-19!165;CL:0000839!4.14e-17!70;CL:0000766!1.10e-16!76;CL:0000557!9.67e-16!71;CL:0002009!1.01e-14!65;CL:0002194!1.31e-14!63;CL:0000576!1.31e-14!63;CL:0000040!1.31e-14!63;CL:0000559!1.31e-14!63;CL:0000763!3.99e-14!112;CL:0000049!3.99e-14!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.40e-87;33!CL:0002057;9.40e-87;33!CL:0000473;2.62e-61;39!CL:0000234;2.62e-61;39!CL:0000576;9.66e-38;48!CL:0000766;1.26e-24;69!CL:0000763;1.88e-13;100!CL:0002087;5.07e-13;104!CL:0000738;3.96e-08;136!CL:0000623;7.26e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.77e-74,42;CL:0002057,3.77e-74,42;CL:0000473,4.41e-64,48;CL:0000234,4.41e-64,48;CL:0002194,5.53e-50,59;CL:0000576,5.53e-50,59;CL:0000040,5.53e-50,59;CL:0000559,5.53e-50,59;CL:0002009,3.64e-48,61;CL:0000839,1.69e-47,66;CL:0000766,2.10e-46,72;CL:0000557,2.38e-43,67;CL:0000763,1.80e-33,108;CL:0000049,1.80e-33,108;CL:0000738,2.45e-33,136;CL:0002031,1.54e-31,120;CL:0002087,5.43e-31,115;CL:0000037,3.49e-29,168;CL:0000988,3.98e-29,177;CL:0002032,6.78e-27,161;CL:0000837,6.78e-27,161;CL:0000134,1.46e-10,354;CL:0002320,3.36e-10,361;CL:0000219,6.28e-09,386;CL:0000048,2.24e-07,427;CL:0000723,3.67e-07,433;CL:0000034,6.92e-07,441;CL:0000623,7.83e-07,3;CL:0000825,7.83e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.50e-57;42!CL:0000049;8.96e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.13e-16!102;UBERON:0003061!1.13e-16!102;UBERON:0002193!5.39e-16!112;UBERON:0002371!1.29e-13!80;UBERON:0001474!1.14e-12!86;UBERON:0002405!3.03e-11!115;UBERON:0004765!2.93e-09!101;UBERON:0001434!2.93e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.56e-37,76;UBERON:0002390,4.66e-35,98;UBERON:0003061,4.66e-35,98;UBERON:0002405,1.33e-34,93;UBERON:0001474,2.35e-34,82;UBERON:0002193,3.32e-31,108;UBERON:0004765,8.99e-31,90;UBERON:0001434,4.30e-27,100;UBERON:0002204,9.07e-14,167;UBERON:0003081,1.82e-13,203;UBERON:0002384,1.05e-09,371 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0.0764134057479513,0,0,0,0.767658796194425,0,0,0,0,0.309868802321207,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0.436194716338694,2.64513160582167,2.42584061187816,2.09186133215116,1.23350366406548,4.33588919253145,2.01384674625505,1.5369642391746,2.12834006899727,3.10271112662957,6.45484683583826,8.12558919566051,1.12945403725563,0.272906150057846,3.37085226667627,1.53041946185451,2.88836124368484,3.19668562899521,1.64925650093358,1.39624560335142,0.852449501065388,2.32167390902867,4.53908179752912,6.22822248995575,2.00998932205395,2.60741459210101,2.6062661364614,5.44859552370032,12.5214396235772,13.2914202725171,0,0,0,0,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0.853460445133014,0.400395987036012,0,0,0,0,0,0,0,0,0,0.786839080455332,0.393010762749165,0.616804496998528,0,0.977766799900771,0.473447805734733,0,0,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0.80642697289893,1.06976078313403,0.289648807765598,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0.522389211897802,0.531831842075461,0.953962497221368,1.71598473234038,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0.49333509683432,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.413303124703062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0.504867548488229,0,0.161646056818812,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,4.85609409356116,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0.176096868026452,0.829312462163088,0.432359860250884,0.6312121671319,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0.179060963239896,1.12085143993527,1.37921532141349,0.431255149719035,2.05348858047597,0,0,0,0,0,0.749007023947182,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0.206768026122887,0.215714200818617,0.213455115606889,0.909382714338778,0,0,0,0,0,0.128139149255701,0,0.160853921143607,1.48418066444991,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,1.0457418040996,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0,0,0.648473311192717,0,0.79312517629427,0.320472213382419,0.962479855263359,0,0.557409525377156,0.144269212976445,0.213425530045242,0.478278818186467,0,0,0.846694330895531,0,0,0,0.156679895773023,2.50634477090067,0,0.1605880751037,0,0,0.687010689511529,0,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0.18714054040822,0.293016358543788,0,0.334330152832435,0,0.23874448473769,0.296964680832639,0.614321404198464,0.994147647766298,0.281338832821026,0.667852230137435,0,1.05562704063997,0.398495976502139,0.276283915531148,0,0,0.492339221844278,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0.21787692703798,0.139423744278603,0,0,0,0.0897576444097721,0.217294743844016,0.957003479195758,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,1.77912677208373,0.370691816839509,0.313265848516366,0,0,0,0.364909578431332,0,0,0,0,0.30607276163049,0.063186579628488,1.20258735531594,0.103688191397247,0,0.330991955875499,0,0,0.284609546029793,0,0.694238953340524,0.293977192243133,0.174118413160805,0.34945333648406,0,1.35458863804719,1.68105429298227,0.821154570532092,0,0.264768380074501,0.451961481561065,0.137041924646751,0.596143835108969,0.126621591911757,0.195551382734803,0,0.213452994739353,0,0,0.229073192331831,0.686379991447858,0.576219191952599,0,0,0,0,0.101998217636322,0,0.600420288709789,0.410716136675979,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0.202210631562555,0.393709926058995,0,0,0,0.160753148465019,0.137539436597234,0,0,0.77380195455795,0.182248669974074,0,0.157611414598396,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0.146552233678082,0,0.129282956361551,0.26446520348538,0.171086837884329,0,0,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0.110929051536852,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0.345430341731199,0,0.414775308455192,0.779441235357554,0.398594520940089,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| ||
|short_description=p8@TNRC6B | |||
}} | }} |
Latest revision as of 19:39, 24 September 2015
Short description: | p8@TNRC6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TNRC6B_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -429bp_to_ENST00000301923, ENST00000441751, NM_001024843, uc003aym.2_5end |
EntrezGene: | TNRC6B |
HGNC: | 29190 |
UniProt: | B0QYM5Q9UPQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.77e-74 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.77e-74 | 42 |
defensive cell | 4.41e-64 | 48 |
phagocyte | 4.41e-64 | 48 |
monopoietic cell | 5.53e-50 | 59 |
monocyte | 5.53e-50 | 59 |
monoblast | 5.53e-50 | 59 |
promonocyte | 5.53e-50 | 59 |
macrophage dendritic cell progenitor | 3.64e-48 | 61 |
myeloid lineage restricted progenitor cell | 1.69e-47 | 66 |
myeloid leukocyte | 2.10e-46 | 72 |
granulocyte monocyte progenitor cell | 2.38e-43 | 67 |
myeloid cell | 1.80e-33 | 108 |
common myeloid progenitor | 1.80e-33 | 108 |
leukocyte | 2.45e-33 | 136 |
hematopoietic lineage restricted progenitor cell | 1.54e-31 | 120 |
nongranular leukocyte | 5.43e-31 | 115 |
hematopoietic stem cell | 3.49e-29 | 168 |
hematopoietic cell | 3.98e-29 | 177 |
hematopoietic oligopotent progenitor cell | 6.78e-27 | 161 |
hematopoietic multipotent progenitor cell | 6.78e-27 | 161 |
mesenchymal cell | 1.46e-10 | 354 |
connective tissue cell | 3.36e-10 | 361 |
motile cell | 6.28e-09 | 386 |
multi fate stem cell | 2.24e-07 | 427 |
somatic stem cell | 3.67e-07 | 433 |
stem cell | 6.92e-07 | 441 |
natural killer cell | 7.83e-07 | 3 |
pro-NK cell | 7.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.56e-37 | 76 |
hematopoietic system | 4.66e-35 | 98 |
blood island | 4.66e-35 | 98 |
immune system | 1.33e-34 | 93 |
bone element | 2.35e-34 | 82 |
hemolymphoid system | 3.32e-31 | 108 |
skeletal element | 8.99e-31 | 90 |
skeletal system | 4.30e-27 | 100 |
musculoskeletal system | 9.07e-14 | 167 |
lateral plate mesoderm | 1.82e-13 | 203 |
connective tissue | 1.05e-09 | 371 |