FFCP PHASE1:Hg19::chr14:60975644..60975673,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4990 | |EntrezGene=4990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10892 | |HGNC=10892 | ||
|TSSclassifier=strong | |||
|UniProt=O95475 | |UniProt=O95475 | ||
|association_with_transcript=0bp_to_ENST00000327720_5end | |association_with_transcript=0bp_to_ENST00000327720_5end | ||
|cluster_id=chr14:60975644..60975673,+ | |||
|coexpression_cluster_id=C1726 | |coexpression_cluster_id=C1726 | ||
|description=CAGE_peak_3_at_SIX6_5end | |description=CAGE_peak_3_at_SIX6_5end | ||
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|ontology_enrichment_celltype=CL:0000064!1.99e-22!3;CL:0005012!1.99e-22!3;CL:0000067!1.99e-22!3;CL:0002304!1.99e-22!3;CL:0000306!5.15e-17!4;CL:0002222!5.15e-17!4;CL:0002224!5.15e-17!4;CL:0000075!6.29e-16!27;CL:0000325!1.87e-10!39;CL:0000710!8.88e-09!20;CL:0000342!2.02e-08!1;CL:0002565!2.02e-08!1;CL:0000147!3.56e-08!14 | |ontology_enrichment_celltype=CL:0000064!1.99e-22!3;CL:0005012!1.99e-22!3;CL:0000067!1.99e-22!3;CL:0002304!1.99e-22!3;CL:0000306!5.15e-17!4;CL:0002222!5.15e-17!4;CL:0002224!5.15e-17!4;CL:0000075!6.29e-16!27;CL:0000325!1.87e-10!39;CL:0000710!8.88e-09!20;CL:0000342!2.02e-08!1;CL:0002565!2.02e-08!1;CL:0000147!3.56e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000064;9.55e-47;3!CL:0000067;9.55e-47;3!CL:0005012;9.55e-47;3!CL:0002304;9.55e-47;3!CL:0000306;2.10e-35;4!CL:0002222;2.10e-35;4!CL:0002224;2.10e-35;4!CL:0000075;1.92e-27;27!CL:0000342;2.08e-16;1!CL:0002565;2.08e-16;1!CL:0000710;1.40e-12;20!CL:0002077;2.96e-07;34 | |ontology_enrichment_celltype_v019=CL:0000064;9.55e-47;3!CL:0000067;9.55e-47;3!CL:0005012;9.55e-47;3!CL:0002304;9.55e-47;3!CL:0000306;2.10e-35;4!CL:0002222;2.10e-35;4!CL:0002224;2.10e-35;4!CL:0000075;1.92e-27;27!CL:0000342;2.08e-16;1!CL:0002565;2.08e-16;1!CL:0000710;1.40e-12;20!CL:0002077;2.96e-07;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,8.84e-47,3;CL:0000067,8.84e-47,3;CL:0005012,8.84e-47,3;CL:0002304,8.84e-47,3;CL:0000306,2.10e-35,4;CL:0002222,2.10e-35,4;CL:0002224,2.10e-35,4;CL:0000075,1.85e-27,27;CL:0000342,2.25e-16,1;CL:0002565,2.25e-16,1;CL:0000710,1.36e-12,20;CL:0002077,1.63e-07,34 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!1.16e-40!11;UBERON:0000970!4.95e-34!20;UBERON:0002104!2.48e-32!21;UBERON:0000020!2.25e-29!23;UBERON:0000019!4.19e-29!19;UBERON:0000047!4.19e-29!19;UBERON:0004088!4.19e-29!19;UBERON:0003072!4.19e-29!19;UBERON:0003071!4.19e-29!19;UBERON:0004128!4.19e-29!19;UBERON:0000488!4.34e-29!4;UBERON:0001032!4.42e-28!24;UBERON:0004456!4.42e-28!24;UBERON:0001456!3.36e-26!21;UBERON:0001801!1.62e-24!14;UBERON:0001778!1.99e-22!3;UBERON:0001775!1.99e-22!3;UBERON:0002203!1.78e-19!6;UBERON:0001768!1.78e-19!6;UBERON:0005085!1.40e-18!29;UBERON:0010077!5.15e-17!4;UBERON:0005389!5.15e-17!4;UBERON:0000484!5.15e-17!4;UBERON:0002546!5.15e-17!4;UBERON:0000965!5.15e-17!4;UBERON:0001803!5.15e-17!4;UBERON:0003073!5.15e-17!4;UBERON:0005426!5.15e-17!4;UBERON:0002200!4.57e-16!11;UBERON:0006876!4.57e-16!11;UBERON:0000007!1.91e-15!2;UBERON:0003056!5.41e-12!61;UBERON:0001444!1.18e-10!48;UBERON:0003075!1.42e-09!86;UBERON:0007284!1.42e-09!86;UBERON:0002346!4.67e-09!90;UBERON:0000076!9.41e-09!8;UBERON:0004121!1.94e-08!169;UBERON:0002506!2.02e-08!1;UBERON:0001769!2.02e-08!1;UBERON:0002363!2.89e-08!1;UBERON:0007647!2.89e-08!1;UBERON:0010115!2.89e-08!1;UBERON:0000924!3.59e-08!173;UBERON:0006601!3.59e-08!173;UBERON:0003296!3.70e-08!4;UBERON:0010133!3.70e-08!4;UBERON:0000033!4.14e-07!123 | |ontology_enrichment_uberon=UBERON:0007625!1.16e-40!11;UBERON:0000970!4.95e-34!20;UBERON:0002104!2.48e-32!21;UBERON:0000020!2.25e-29!23;UBERON:0000019!4.19e-29!19;UBERON:0000047!4.19e-29!19;UBERON:0004088!4.19e-29!19;UBERON:0003072!4.19e-29!19;UBERON:0003071!4.19e-29!19;UBERON:0004128!4.19e-29!19;UBERON:0000488!4.34e-29!4;UBERON:0001032!4.42e-28!24;UBERON:0004456!4.42e-28!24;UBERON:0001456!3.36e-26!21;UBERON:0001801!1.62e-24!14;UBERON:0001778!1.99e-22!3;UBERON:0001775!1.99e-22!3;UBERON:0002203!1.78e-19!6;UBERON:0001768!1.78e-19!6;UBERON:0005085!1.40e-18!29;UBERON:0010077!5.15e-17!4;UBERON:0005389!5.15e-17!4;UBERON:0000484!5.15e-17!4;UBERON:0002546!5.15e-17!4;UBERON:0000965!5.15e-17!4;UBERON:0001803!5.15e-17!4;UBERON:0003073!5.15e-17!4;UBERON:0005426!5.15e-17!4;UBERON:0002200!4.57e-16!11;UBERON:0006876!4.57e-16!11;UBERON:0000007!1.91e-15!2;UBERON:0003056!5.41e-12!61;UBERON:0001444!1.18e-10!48;UBERON:0003075!1.42e-09!86;UBERON:0007284!1.42e-09!86;UBERON:0002346!4.67e-09!90;UBERON:0000076!9.41e-09!8;UBERON:0004121!1.94e-08!169;UBERON:0002506!2.02e-08!1;UBERON:0001769!2.02e-08!1;UBERON:0002363!2.89e-08!1;UBERON:0007647!2.89e-08!1;UBERON:0010115!2.89e-08!1;UBERON:0000924!3.59e-08!173;UBERON:0006601!3.59e-08!173;UBERON:0003296!3.70e-08!4;UBERON:0010133!3.70e-08!4;UBERON:0000033!4.14e-07!123 | ||
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|short_description=p3@SIX6 | |short_description=p3@SIX6 | ||
}} | }} |
Latest revision as of 20:47, 24 September 2015
Short description: | p3@SIX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SIX6_5end |
Coexpression cluster: | C1726_acute_Lens_pituitary_Ciliary_eye_H9_retina |
Association with transcript: | 0bp_to_ENST00000327720_5end |
EntrezGene: | SIX6 |
HGNC: | 10892 |
UniProt: | O95475 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 8.84e-47 | 3 |
ciliated epithelial cell | 8.84e-47 | 3 |
multi-ciliated epithelial cell | 8.84e-47 | 3 |
non-pigmented ciliary epithelial cell | 8.84e-47 | 3 |
crystallin accumulating cell | 2.10e-35 | 4 |
vertebrate lens cell | 2.10e-35 | 4 |
lens epithelial cell | 2.10e-35 | 4 |
columnar/cuboidal epithelial cell | 1.85e-27 | 27 |
pigment cell (sensu Vertebrata) | 2.25e-16 | 1 |
iris pigment epithelial cell | 2.25e-16 | 1 |
neurecto-epithelial cell | 1.36e-12 | 20 |
ecto-epithelial cell | 1.63e-07 | 34 |