FFCP PHASE1:Hg19::chr8:102504651..102504683,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=79977 | |EntrezGene=79977 | ||
Line 8: | Line 8: | ||
|UniProt=Q6ISB3 | |UniProt=Q6ISB3 | ||
|association_with_transcript=0bp_to_ENST00000251808,ENST00000472106,ENST00000521085,NM_024915,uc010mbt.1,uc010mbu.2,uc011lhi.1_5end | |association_with_transcript=0bp_to_ENST00000251808,ENST00000472106,ENST00000521085,NM_024915,uc010mbt.1,uc010mbu.2,uc011lhi.1_5end | ||
|cluster_id=chr8:102504651..102504683,+ | |||
|coexpression_cluster_id=C1541 | |coexpression_cluster_id=C1541 | ||
|description=CAGE_peak_1_at_GRHL2_5end | |description=CAGE_peak_1_at_GRHL2_5end |
Latest revision as of 21:36, 24 September 2015
Short description: | p1@GRHL2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRHL2_5end |
Coexpression cluster: | C1541_amniotic_Amniotic_MCF7_Placental_chorionic_oral_acantholytic |
Association with transcript: | 0bp_to_ENST00000251808, ENST00000472106, ENST00000521085, NM_024915, uc010mbt.1, uc010mbu.2, uc011lhi.1_5end |
EntrezGene: | GRHL2 |
HGNC: | 2799 |
UniProt: | Q6ISB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@GRHL2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.12e-23 | 253 |
endo-epithelial cell | 3.32e-21 | 42 |
endodermal cell | 7.33e-16 | 58 |
respiratory epithelial cell | 2.70e-10 | 13 |
epithelial cell of alimentary canal | 7.02e-10 | 20 |
extraembryonic cell | 1.90e-07 | 19 |
general ecto-epithelial cell | 4.55e-07 | 14 |
Showing 1 to 7 of 7 entries
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.38e-26 | 160 |
endoderm | 4.38e-26 | 160 |
presumptive endoderm | 4.38e-26 | 160 |
digestive system | 7.74e-19 | 145 |
digestive tract | 7.74e-19 | 145 |
primitive gut | 7.74e-19 | 145 |
subdivision of digestive tract | 1.48e-15 | 118 |
extraembryonic membrane | 1.01e-13 | 14 |
membranous layer | 1.01e-13 | 14 |
respiratory system | 4.04e-13 | 74 |
Showing 1 to 10 of 39 entries
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.41e-16 | 106 |
squamous cell carcinoma | 2.47e-15 | 14 |
cell type cancer | 1.27e-10 | 143 |
adenocarcinoma | 4.13e-10 | 25 |
thoracic cancer | 7.55e-07 | 4 |
breast cancer | 7.55e-07 | 4 |
Showing 1 to 6 of 6 entries