FFCP PHASE1:Hg19::chr2:224702643..224702657,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130340 | |EntrezGene=130340 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18971 | |HGNC=18971 | ||
|TSSclassifier=strong | |||
|UniProt=C9JZK4 | |UniProt=C9JZK4 | ||
|association_with_transcript=86bp_to_ENST00000444408_5end | |association_with_transcript=86bp_to_ENST00000444408_5end | ||
|cluster_id=chr2:224702643..224702657,- | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_6_at_AP1S3_5end | |description=CAGE_peak_6_at_AP1S3_5end | ||
|id=chr2:224702643..224702657,- | |id=chr2:224702643..224702657,- | ||
|ontology_enrichment_celltype=CL:0000097;5.58e-17;5!CL:0000453;4.70e-16;5!CL:0002393;4.61e-14;6!CL:0002397;4.61e-14;6!CL:0002032;6.05e-10;1!CL:0000557;6.05e-10;1!CL:0000163;1.14e-09;9!CL:0000990;3.65e-09;8!CL:0000766;1.13e-08;69!CL:0000451;1.38e-07;10!CL:0000576;5.89e-07;48 | |ontology_enrichment_celltype=CL:0000738!1.59e-11!140;CL:0002031!5.41e-10!124;CL:0002032!1.12e-08!165;CL:0000837!1.12e-08!165;CL:0000988!1.64e-08!182;CL:0002087!2.21e-08!119;CL:0000037!4.09e-08!172;CL:0000566!4.09e-08!172;CL:0000945!6.99e-08!24;CL:0000826!6.99e-08!24;CL:0000557!8.95e-07!71 | ||
| | |ontology_enrichment_celltype_v019=CL:0000097;5.58e-17;5!CL:0000453;4.70e-16;5!CL:0002393;4.61e-14;6!CL:0002397;4.61e-14;6!CL:0002032;6.05e-10;1!CL:0000557;6.05e-10;1!CL:0000163;1.14e-09;9!CL:0000990;3.65e-09;8!CL:0000766;1.13e-08;69!CL:0000451;1.38e-07;10!CL:0000576;5.89e-07;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.38e-19,67;CL:0000097,5.59e-17,5;CL:0002028,5.59e-17,5;CL:0000453,8.09e-16,5;CL:0000763,1.90e-15,108;CL:0000049,1.90e-15,108;CL:0000839,3.71e-14,66;CL:0000988,7.12e-13,177;CL:0000766,7.57e-13,72;CL:0000860,2.63e-12,42;CL:0002057,2.63e-12,42;CL:0000738,9.83e-12,136;CL:0002032,5.11e-11,161;CL:0000837,5.11e-11,161;CL:0000473,1.22e-10,48;CL:0000234,1.22e-10,48;CL:0000037,1.90e-10,168;CL:0002009,4.36e-10,61;CL:0002031,5.14e-10,120;CL:0000163,1.14e-09,9;CL:0002393,1.49e-09,9;CL:0002397,1.49e-09,9;CL:0000990,4.91e-09,8;CL:0002194,2.63e-08,59;CL:0000576,2.63e-08,59;CL:0000040,2.63e-08,59;CL:0000559,2.63e-08,59;CL:0000451,1.76e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;4.39e-10;42!UBERON:0005754;6.05e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0006947;2.00e-12;3!UBERON:0004054;2.00e-12;3!UBERON:0001000;6.05e-10;1!UBERON:0000998;6.05e-10;1!UBERON:0006868;6.05e-10;1!UBERON:0005352;6.05e-10;1!UBERON:0005904;1.52e-09;4 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.14e-08!112;UBERON:0002390!3.29e-08!102;UBERON:0003061!3.29e-08!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.00e-12;3!UBERON:0004054;2.00e-12;3!UBERON:0001000;6.05e-10;1!UBERON:0000998;6.05e-10;1!UBERON:0006868;6.05e-10;1!UBERON:0005352;6.05e-10;1!UBERON:0005904;1.52e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.20e-17,98;UBERON:0003061,2.20e-17,98;UBERON:0002371,4.82e-17,76;UBERON:0001474,1.19e-15,82;UBERON:0002193,1.49e-15,108;UBERON:0004765,4.40e-14,90;UBERON:0002405,1.46e-13,93;UBERON:0006947,1.59e-12,3;UBERON:0004054,1.59e-12,3;UBERON:0001434,1.81e-12,100;UBERON:0001000,4.06e-10,1;UBERON:0005352,4.06e-10,1;UBERON:0000998,6.33e-10,1;UBERON:0006868,6.33e-10,1;UBERON:0005904,1.28e-09,4;UBERON:0003081,3.00e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.410502947249729,0.236132343941038,0.786728553697808,0,0.154816123316076,0,0,0,0.0774672005803016,0.284338464974843,0,3.32397245119126,3.20871115952227,2.82114131930607,0,0,0.257575567634187,0,0.377875943688809,0,0.464858073811369,1.23350366406548,0.309706370895104,0,0,0.236482229888585,0.344745680736619,1.29096936716765,0,0,0,0,0,0,0,0,0,0,0.290209238628584,1.70215567407342,0.622822248995575,0,0,0,1.81619850790011,1.10483290796269,0.632924774881769,0,0,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0.364295288292542,0,0,0,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,1.1240175325762,0,0.0925884451585296,0,0,1.44331342025273,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0.492663237895943,0,8.29312462163088,10.5207565994382,10.7306068412423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.602878754119172,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.0920809889358963,0,0,0.131124414959424,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0.330569830721956,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.192444225451024,0,0,0.376575203107117,0.43050537267123,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0.490080431962063,0.185803175125719,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0.333698283423817,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0.121360521749513,0.222886768554957,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,1.10776324914963,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0.724999575434793,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.282706142867882,0,0,0,0.611030144933625,0.889563386041866,1.72989514525104,2.08843899010911,0,0,0,0.182454789215666,0.19566461893209,0,1.57833761139756,0,0,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0,0,0.195984794828755,0,0.52418000472609,0,0.0967563312890851,0,0.0821154570532092,0,0.706049013532002,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0.136905378891993,1.27746588066972,0.859530882839914,0.788662062837943,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,1.1248694577575,0,0.121499113316049,0,0.236417121897595,0.157363764404994,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,1.16916185303633,0.664324201566815,1.14495775979091,0,0,0,0.39997479170986,0,0.172214979660816,0.567515953566836,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.591424344868181,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0,0.460935950223117,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0.23248285073625,0,0,0.207216164163037,0,0,0,0,0,1.27016115057279,0,0,0,0,0.196300467230486,0.121917924982269,0,0,0,0.485710993059139,0.467878926924211,0,0,0,0,0.301925687133347,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.799529247399431,0,0.352894871715692,0.160482733378337,0,0,0.143339583151451,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0.23806443146374,0.129177819672012,0.124149428591716,0,0.190941474834495,0.404234377916439,0,0,0.26940821205835,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0.961705476909699 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| ||
|short_description=p6@AP1S3 | |short_description=p6@AP1S3 | ||
}} | }} |
Latest revision as of 00:25, 25 September 2015
Short description: | p6@AP1S3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_AP1S3_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 86bp_to_ENST00000444408_5end |
EntrezGene: | AP1S3 |
HGNC: | 18971 |
UniProt: | C9JZK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.38e-19 | 67 |
mast cell | 5.59e-17 | 5 |
basophil mast progenitor cell | 5.59e-17 | 5 |
Langerhans cell | 8.09e-16 | 5 |
myeloid cell | 1.90e-15 | 108 |
common myeloid progenitor | 1.90e-15 | 108 |
myeloid lineage restricted progenitor cell | 3.71e-14 | 66 |
hematopoietic cell | 7.12e-13 | 177 |
myeloid leukocyte | 7.57e-13 | 72 |
classical monocyte | 2.63e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.63e-12 | 42 |
leukocyte | 9.83e-12 | 136 |
hematopoietic oligopotent progenitor cell | 5.11e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.11e-11 | 161 |
defensive cell | 1.22e-10 | 48 |
phagocyte | 1.22e-10 | 48 |
hematopoietic stem cell | 1.90e-10 | 168 |
macrophage dendritic cell progenitor | 4.36e-10 | 61 |
hematopoietic lineage restricted progenitor cell | 5.14e-10 | 120 |
endocrine cell | 1.14e-09 | 9 |
intermediate monocyte | 1.49e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.49e-09 | 9 |
conventional dendritic cell | 4.91e-09 | 8 |
monopoietic cell | 2.63e-08 | 59 |
monocyte | 2.63e-08 | 59 |
monoblast | 2.63e-08 | 59 |
promonocyte | 2.63e-08 | 59 |
dendritic cell | 1.76e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.20e-17 | 98 |
blood island | 2.20e-17 | 98 |
bone marrow | 4.82e-17 | 76 |
bone element | 1.19e-15 | 82 |
hemolymphoid system | 1.49e-15 | 108 |
skeletal element | 4.40e-14 | 90 |
immune system | 1.46e-13 | 93 |
male genital duct | 1.59e-12 | 3 |
internal male genitalia | 1.59e-12 | 3 |
skeletal system | 1.81e-12 | 100 |
vas deferens | 4.06e-10 | 1 |
spermatic cord | 4.06e-10 | 1 |
seminal vesicle | 6.33e-10 | 1 |
seminal fluid secreting gland | 6.33e-10 | 1 |
duct of male reproductive system | 1.28e-09 | 4 |
lateral plate mesoderm | 3.00e-08 | 203 |