FFCP PHASE1:Hg19::chr19:10395834..10395869,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3383 | |EntrezGene=3383 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5344 | |HGNC=5344 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-290bp_to_M55091_5end | |association_with_transcript=-290bp_to_M55091_5end | ||
|cluster_id=chr19:10395834..10395869,+ | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_2_at_ICAM1_5end | |description=CAGE_peak_2_at_ICAM1_5end | ||
|id=chr19:10395834..10395869,+ | |id=chr19:10395834..10395869,+ | ||
|ontology_enrichment_celltype=CL:0000766!3.88e-25!76;CL:0000557!5.37e-22!71;CL:0002009!2.03e-21!65;CL:0002057!1.32e-20!42;CL:0002194!1.65e-20!63;CL:0000576!1.65e-20!63;CL:0000040!1.65e-20!63;CL:0000559!1.65e-20!63;CL:0000839!2.19e-20!70;CL:0000860!3.45e-19!45;CL:0000738!4.10e-16!140;CL:0000763!1.94e-13!112;CL:0000049!1.94e-13!112;CL:0002031!1.01e-11!124;CL:0002087!1.13e-11!119;CL:0000988!9.81e-10!182;CL:0000037!5.25e-09!172;CL:0000566!5.25e-09!172;CL:0000048!6.36e-09!430;CL:0002032!7.48e-09!165;CL:0000837!7.48e-09!165;CL:0000034!1.89e-08!444;CL:0000723!3.12e-08!436;CL:0000134!7.37e-08!358;CL:0000213!4.43e-07!57;CL:0000215!4.43e-07!57;CL:0002320!4.98e-07!365;CL:0000077!5.09e-07!19;CL:0000144!6.43e-07!625 | |ontology_enrichment_celltype=CL:0000766!3.88e-25!76;CL:0000557!5.37e-22!71;CL:0002009!2.03e-21!65;CL:0002057!1.32e-20!42;CL:0002194!1.65e-20!63;CL:0000576!1.65e-20!63;CL:0000040!1.65e-20!63;CL:0000559!1.65e-20!63;CL:0000839!2.19e-20!70;CL:0000860!3.45e-19!45;CL:0000738!4.10e-16!140;CL:0000763!1.94e-13!112;CL:0000049!1.94e-13!112;CL:0002031!1.01e-11!124;CL:0002087!1.13e-11!119;CL:0000988!9.81e-10!182;CL:0000037!5.25e-09!172;CL:0000566!5.25e-09!172;CL:0000048!6.36e-09!430;CL:0002032!7.48e-09!165;CL:0000837!7.48e-09!165;CL:0000034!1.89e-08!444;CL:0000723!3.12e-08!436;CL:0000134!7.37e-08!358;CL:0000213!4.43e-07!57;CL:0000215!4.43e-07!57;CL:0002320!4.98e-07!365;CL:0000077!5.09e-07!19;CL:0000144!6.43e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.40e-33;33!CL:0002057;1.40e-33;33!CL:0000473;1.72e-27;39!CL:0000234;1.72e-27;39!CL:0000576;7.12e-18;48!CL:0000766;8.47e-17;69!CL:0000763;5.15e-08;100!CL:0000094;1.53e-07;8!CL:0000081;5.25e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.47e-35,72;CL:0000473,2.57e-34,48;CL:0000234,2.57e-34,48;CL:0000860,1.13e-33,42;CL:0002057,1.13e-33,42;CL:0000557,1.59e-28,67;CL:0000839,1.89e-27,66;CL:0002009,4.37e-27,61;CL:0002194,1.22e-26,59;CL:0000576,1.22e-26,59;CL:0000040,1.22e-26,59;CL:0000559,1.22e-26,59;CL:0000763,1.33e-19,108;CL:0000049,1.33e-19,108;CL:0000738,9.90e-17,136;CL:0002031,6.17e-13,120;CL:0002087,5.28e-12,115;CL:0000988,1.07e-11,177;CL:0000048,3.12e-11,427;CL:0000037,7.27e-11,168;CL:0000723,9.78e-11,433;CL:0002032,1.04e-10,161;CL:0000837,1.04e-10,161;CL:0000034,1.42e-10,441;CL:0000134,7.23e-09,354;CL:0002320,2.55e-08,361;CL:0000094,1.34e-07,8;CL:0000081,4.79e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.38e-25;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!8.82e-22!115;UBERON:0002371!3.59e-18!80;UBERON:0002193!2.98e-17!112;UBERON:0002390!1.38e-16!102;UBERON:0003061!1.38e-16!102;UBERON:0001474!5.62e-15!86;UBERON:0003081!2.97e-14!216;UBERON:0004765!4.38e-12!101;UBERON:0001434!4.38e-12!101;UBERON:0002204!1.12e-09!167 | |ontology_enrichment_uberon=UBERON:0002405!8.82e-22!115;UBERON:0002371!3.59e-18!80;UBERON:0002193!2.98e-17!112;UBERON:0002390!1.38e-16!102;UBERON:0003061!1.38e-16!102;UBERON:0001474!5.62e-15!86;UBERON:0003081!2.97e-14!216;UBERON:0004765!4.38e-12!101;UBERON:0001434!4.38e-12!101;UBERON:0002204!1.12e-09!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.32e-24,108;UBERON:0002405,3.84e-24,93;UBERON:0002371,1.19e-23,76;UBERON:0002390,3.52e-22,98;UBERON:0003061,3.52e-22,98;UBERON:0001474,5.17e-21,82;UBERON:0004765,4.61e-18,90;UBERON:0003081,5.22e-17,203;UBERON:0001434,4.70e-16,100;UBERON:0002204,1.01e-12,167;UBERON:0000926,3.05e-10,315;UBERON:0004120,3.05e-10,315;UBERON:0006603,3.05e-10,315;UBERON:0002384,1.38e-07,371 | |||
|phase1_expression=0,0.856402095563933,0.140954404095971,1.0007329835313,0,0,0,0,0,3.68600904752263,4.88460817580699,0,0,0,0,2.01697543935533,1.80808358407193,1.46062018077475,1.95173119516203,0.123121058076788,0,0,0,0,0,0.534893840235659,0.410502947249729,0.787107813136792,1.57345710739562,0,0.464448369948228,0,0.30120591877825,0,0.154934401160603,0.995184627411951,0,1.66198622559563,6.61796676651468,3.47217393145363,0.447830948479849,0.647787332037959,0.257575567634187,1.01778767145695,0.755751887377619,0.970336244751265,5.57829688573643,5.34518254428373,6.19412741790207,26.4677000936378,16.3942852178624,20.8104362301955,9.65287906062532,14.846147722428,16.251178391321,7.71793592124679,6.00393530127261,3.14612878223118,14.6920268338033,8.66508373105453,21.7374622771674,6.92687730392104,11.1699648268114,10.2293940127847,21.4754836585152,13.6172453925874,21.7987787148451,14.3211739196344,22.4237654920687,14.5516525952428,14.5295880632009,10.3117738076518,13.2914202725171,0.422510572623884,0.212604299965044,0.209658645508376,0.898629049171961,0.300353785683013,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0.393010762749165,0,0,0,0,0,0.222820913770347,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0.895037932904712,0.361439152384566,1.00267582127178,0,1.5905718941022,1.45990461090791,0.0945348171640679,0,0.087834785693126,0.327447688744282,0,0,0,0.348259474598534,1.32957960518865,0.715471872916026,0.571994910780128,0,0,0.860234595106124,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0.516833518338658,1.77883131343355,0,0.402829317109147,0.760272105718513,0.732186172644509,0,0,0,0,0,0,0,0,5.27121669744253,7.75560528296651,0,0.496971951695318,0.633152558322899,1.45650098894541,1.14734648299525,0.354668382198357,0.560677600142307,0,1.97334038733728,0.311211035399766,1.0776853765575,0.490385709340376,0.302714855289863,0,0,0,0,0.149448680551801,0,0,0,0,0,0,1.18800285728205,0.741800787835671,0,1.43723628363248,0,0.125118519871964,0,0,0,0.300476117813194,0,0,0,0.423863802319124,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0.773043412653187,1.90922284413584,0.860413786167011,0.121973706129595,0.265059536642971,0,0.518305275076852,0,0,0,1.28648187638577,0,0.464367928031979,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0.196221465125346,0,0.738155454624648,1.40241773803446,0.4115740113314,0,1.26755034821831,0.982827216677626,1.18157981336281,0,0,0,0.219500570817251,0,0,0,0,0,1.44331342025273,0,0,1.58803092537181,3.24089858803628,1.90254152234598,0,0,0.738651018262192,0.936017060556951,0.297262324577456,0,0,0.425325291727159,0,0,0,0,0.704387472105808,4.14656231081544,2.01767934783746,2.14612136824846,0.063497894292169,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0,1.29271715757778,0,0,0.26593811658487,0,0,0,0,1.28680194292333,0,0,0,0.710783897485092,0,1.50719688529793,1.74306691720059,1.89948683245908,1.2162378064119,3.51579964002488,6.32501818449095,0.239624855491583,0,0,0.289562613335158,0,0.179060963239896,0.112085143993527,0.394061520403854,0.215627574859517,0.256686072559497,0,0,0,0,1.27587750330633,11.2351053592077,56.8406772487647,7.0450637284126,0,0,0,0.415941723061614,0.178428988797162,0.315404830067869,0.117141414992713,0,2.27407504055985,0,0,0,0,0.195801157462741,0,0.413536052245775,1.07857100409308,1.17400313583789,0,0,0.30239029332968,0,0,0.280660094433074,0.384417447767103,0.511707249066704,1.12597744800525,0,1.23367755042124,0.355123450626254,0.0821271560138091,5.71179872101983,0,0.362578348774867,0.601519410909855,0,0.459257792658427,0,0.917870904715969,0.451199612907412,0.15403067420883,0,0,0.316654886678627,1.13733384070897,0.340187410553031,0.431831832204279,3.08454505380579,0.541892875087706,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0.650756789328606,0.103041011647722,0,0,0,0,3.21367859688319,0.193341436584244,0,0,0.275673144969061,0,0,0,0,1.98341898433174,1.15314040419064,0.893288987462089,0.30347334256665,0,1.25924938732256,0,0.308033580176089,1.06461206063404,0,0.55597265731176,0.572499546967965,0,0,0.762520775695299,0,0,0,3.92474320099615,0.539617372749944,0.274537029736055,0.353437207037059,1.2130948894399,0,0,0.48763373908959,8.04254515783239,0,0,0.141405431953713,1.13008116620243,0,2.65375590096488,1.75380354101505,0,0,0,0.30982349809975,0,0.143411352204052,0.294747123039363,0,0,0.844430541190656,1.64647446479951,0,0.349934720244983,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0.321176150207399,0.201799707191048,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0.659215496907038,0,0.398495976502139,0.276283915531148,0,0.102268682502155,0.246169610922139,0.622079175323615,0.0898683511473268,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0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| ||
|short_description=p2@ICAM1 | |short_description=p2@ICAM1 | ||
}} | }} |
Latest revision as of 00:29, 25 September 2015
Short description: | p2@ICAM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ICAM1_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | -290bp_to_M55091_5end |
EntrezGene: | ICAM1 |
HGNC: | 5344 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.47e-35 | 72 |
defensive cell | 2.57e-34 | 48 |
phagocyte | 2.57e-34 | 48 |
classical monocyte | 1.13e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-33 | 42 |
granulocyte monocyte progenitor cell | 1.59e-28 | 67 |
myeloid lineage restricted progenitor cell | 1.89e-27 | 66 |
macrophage dendritic cell progenitor | 4.37e-27 | 61 |
monopoietic cell | 1.22e-26 | 59 |
monocyte | 1.22e-26 | 59 |
monoblast | 1.22e-26 | 59 |
promonocyte | 1.22e-26 | 59 |
myeloid cell | 1.33e-19 | 108 |
common myeloid progenitor | 1.33e-19 | 108 |
leukocyte | 9.90e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 6.17e-13 | 120 |
nongranular leukocyte | 5.28e-12 | 115 |
hematopoietic cell | 1.07e-11 | 177 |
multi fate stem cell | 3.12e-11 | 427 |
hematopoietic stem cell | 7.27e-11 | 168 |
somatic stem cell | 9.78e-11 | 433 |
hematopoietic oligopotent progenitor cell | 1.04e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.04e-10 | 161 |
stem cell | 1.42e-10 | 441 |
mesenchymal cell | 7.23e-09 | 354 |
connective tissue cell | 2.55e-08 | 361 |
granulocyte | 1.34e-07 | 8 |
blood cell | 4.79e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.32e-24 | 108 |
immune system | 3.84e-24 | 93 |
bone marrow | 1.19e-23 | 76 |
hematopoietic system | 3.52e-22 | 98 |
blood island | 3.52e-22 | 98 |
bone element | 5.17e-21 | 82 |
skeletal element | 4.61e-18 | 90 |
lateral plate mesoderm | 5.22e-17 | 203 |
skeletal system | 4.70e-16 | 100 |
musculoskeletal system | 1.01e-12 | 167 |
mesoderm | 3.05e-10 | 315 |
mesoderm-derived structure | 3.05e-10 | 315 |
presumptive mesoderm | 3.05e-10 | 315 |
connective tissue | 1.38e-07 | 371 |