FFCP PHASE1:Hg19::chr2:225266779..225266786,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:225266779..225266786,- to FFCP PHASE1:Hg19::chr2:225266779..225266786,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79843 | |EntrezGene=79843 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26224 | |HGNC=26224 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_ENST00000243806_5end | |||
|cluster_id=chr2:225266779..225266786,- | |||
|coexpression_cluster_id=C1237 | |||
|description=CAGE_peak_4_at_FAM124B_5end | |||
|id=chr2:225266779..225266786,- | |||
|ontology_enrichment_celltype=CL:0002139!2.67e-41!24;CL:0000115!7.34e-37!35;CL:0000071!3.22e-30!18;CL:0002546!3.22e-30!18;CL:0002078!2.06e-27!44;CL:0000213!4.08e-19!57;CL:0000215!4.08e-19!57;CL:1000413!8.74e-18!9;CL:0002543!8.40e-13!6;CL:0005020!1.31e-12!6;CL:0002138!1.31e-12!6;CL:0005022!1.31e-12!6;CL:0002544!2.53e-12!6;CL:0002618!3.28e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002139;8.13e-112;24!CL:0000071;2.32e-80;18!CL:0000115;2.06e-78;36!CL:1000413;1.32e-52;9!CL:0002078;2.73e-50;45!CL:0000213;1.28e-36;58!CL:0000215;1.28e-36;58!CL:0002138;1.50e-32;6!CL:0002543;2.01e-32;6!CL:0002544;3.00e-31;6!CL:0000076;7.57e-14;63!CL:0002618;1.18e-11;3!CL:0002188;2.74e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.18e-112,24;CL:0000115,1.26e-90,36;CL:0000071,1.28e-80,18;CL:0002546,1.28e-80,18;CL:0002078,8.05e-72,45;CL:0000213,6.00e-55,58;CL:0000215,6.00e-55,58;CL:1000413,1.53e-52,9;CL:0002543,1.05e-32,6;CL:0005020,1.77e-32,6;CL:0002138,1.77e-32,6;CL:0005022,1.77e-32,6;CL:0002544,3.64e-31,6;CL:0000222,1.78e-24,121;CL:0000076,2.81e-21,63;CL:0002618,1.15e-11,3;CL:0002321,8.38e-10,250;CL:0000066,9.48e-10,253;CL:0002188,3.06e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;2.32e-80;18!CL:0005022;1.50e-32;6!CL:0000222;3.26e-08;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.22e-30!18;UBERON:0004638!3.22e-30!18;UBERON:0004852!3.22e-30!18;UBERON:0000487!1.07e-23!22;UBERON:0006914!3.44e-20!25;UBERON:0003915!8.74e-18!9;UBERON:0004700!8.74e-18!9;UBERON:0001917!8.74e-18!9;UBERON:0000055!1.41e-16!69;UBERON:0002049!1.60e-14!79;UBERON:0007798!1.60e-14!79;UBERON:0007023!1.54e-12!115;UBERON:0001981!2.10e-11!60;UBERON:0007500!2.10e-11!60;UBERON:0004537!2.10e-11!60;UBERON:0006965!2.10e-11!60;UBERON:0001638!1.33e-10!9;UBERON:0003920!1.33e-10!9;UBERON:0004582!1.33e-10!9;UBERON:0004111!1.81e-10!241;UBERON:0004535!2.23e-10!110;UBERON:0000025!2.70e-10!194;UBERON:0001009!7.32e-10!113;UBERON:0004872!1.85e-09!84;UBERON:0001473!3.51e-09!8;UBERON:0004536!3.51e-09!8;UBERON:0006558!3.51e-09!8;UBERON:0000477!5.03e-09!286;UBERON:0003914!2.62e-07!118;UBERON:0002465!3.94e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.32e-80;18!UBERON:0001986;2.32e-80;18!UBERON:0004852;2.32e-80;18!UBERON:0000487;2.53e-65;22!UBERON:0006914;3.37e-57;25!UBERON:0003915;1.32e-52;9!UBERON:0004700;1.32e-52;9!UBERON:0001917;1.32e-52;9!UBERON:0000490;7.75e-39;33!UBERON:0001473;2.10e-24;8!UBERON:0004536;2.10e-24;8!UBERON:0006558;2.10e-24;8!UBERON:0000055;4.57e-22;65!UBERON:0001638;1.34e-21;9!UBERON:0003920;1.34e-21;9!UBERON:0004582;1.34e-21;9!UBERON:0002465;1.66e-19;10!UBERON:0007500;8.78e-15;56!UBERON:0001981;8.78e-15;56!UBERON:0004537;8.78e-15;56!UBERON:0002049;5.36e-14;75!UBERON:0007798;5.36e-14;75!UBERON:0003914;7.18e-12;74!UBERON:0001009;2.70e-10;112!UBERON:0001637;3.13e-10;42!UBERON:0003509;3.13e-10;42!UBERON:0004572;3.13e-10;42!UBERON:0004111;3.02e-09;130!UBERON:0004535;3.84e-09;109!UBERON:0002134;6.72e-09;1!UBERON:0005208;6.72e-09;1!UBERON:0004145;6.72e-09;1!UBERON:0005946;6.72e-09;1!UBERON:0005965;6.72e-09;1!UBERON:0002078;6.72e-09;1!UBERON:0000947;7.48e-09;21!UBERON:0010191;7.48e-09;21!UBERON:0000025;7.56e-08;93!UBERON:0002066;2.50e-07;5!UBERON:0002405;4.14e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.28e-80,18;UBERON:0001986,1.28e-80,18;UBERON:0004852,1.28e-80,18;UBERON:0000487,1.56e-65,22;UBERON:0006914,2.21e-57,25;UBERON:0003915,1.53e-52,9;UBERON:0004700,1.53e-52,9;UBERON:0001917,1.53e-52,9;UBERON:0000055,1.12e-41,68;UBERON:0002049,6.83e-36,78;UBERON:0007798,6.83e-36,78;UBERON:0007500,2.02e-26,59;UBERON:0001981,2.02e-26,59;UBERON:0004537,2.02e-26,59;UBERON:0006965,2.02e-26,59;UBERON:0004535,1.09e-24,109;UBERON:0001473,2.38e-24,8;UBERON:0004536,2.38e-24,8;UBERON:0006558,2.38e-24,8;UBERON:0001009,6.21e-24,112;UBERON:0001638,8.73e-22,9;UBERON:0003920,8.73e-22,9;UBERON:0004582,8.73e-22,9;UBERON:0002465,1.83e-19,10;UBERON:0004872,5.42e-18,83;UBERON:0003914,7.57e-16,117;UBERON:0004111,1.06e-11,240;UBERON:0001637,1.79e-10,42;UBERON:0003509,1.79e-10,42;UBERON:0004572,1.79e-10,42;UBERON:0002134,6.22e-09,1;UBERON:0005208,6.22e-09,1;UBERON:0005946,6.22e-09,1;UBERON:0005965,6.22e-09,1;UBERON:0002078,6.22e-09,1;UBERON:0000490,6.54e-09,148;UBERON:0000947,7.89e-09,21;UBERON:0010191,7.89e-09,21;UBERON:0000025,2.28e-08,192;UBERON:0003081,9.51e-08,203;UBERON:0002066,2.46e-07,5 | |||
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|short_description=p4@FAM124B | |||
}} | }} |
Latest revision as of 01:23, 25 September 2015
Short description: | p4@FAM124B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM124B_5end |
Coexpression cluster: | C1237_Endothelial_Preadipocyte_Lymphatic_Renal_lung_heart_skin |
Association with transcript: | 15bp_to_ENST00000243806_5end |
EntrezGene: | FAM124B |
HGNC: | 26224 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.18e-112 | 24 |
endothelial cell | 1.26e-90 | 36 |
blood vessel endothelial cell | 1.28e-80 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.28e-80 | 18 |
meso-epithelial cell | 8.05e-72 | 45 |
lining cell | 6.00e-55 | 58 |
barrier cell | 6.00e-55 | 58 |
endothelial cell of artery | 1.53e-52 | 9 |
vein endothelial cell | 1.05e-32 | 6 |
lymphangioblast | 1.77e-32 | 6 |
endothelial cell of lymphatic vessel | 1.77e-32 | 6 |
vascular lymphangioblast | 1.77e-32 | 6 |
aortic endothelial cell | 3.64e-31 | 6 |
mesodermal cell | 1.78e-24 | 121 |
squamous epithelial cell | 2.81e-21 | 63 |
endothelial cell of umbilical vein | 1.15e-11 | 3 |
embryonic cell | 8.38e-10 | 250 |
epithelial cell | 9.48e-10 | 253 |
glomerular endothelial cell | 3.06e-07 | 5 |