FFCP PHASE1:Hg19::chr19:926001..926046,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:926001..926046,+ to FFCP PHASE1:Hg19::chr19:926001..926046,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1820 | |EntrezGene=1820 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3031 | |HGNC=3031 | ||
|TSSclassifier=strong | |||
|UniProt=Q99856 | |UniProt=Q99856 | ||
|association_with_transcript=0bp_to_ENST00000263620,NM_005224,uc002lql.2_5end | |||
|cluster_id=chr19:926001..926046,+ | |||
|description=CAGE_peak_1_at_ARID3A_5end | |||
|id=chr19:926001..926046,+ | |||
|ontology_enrichment_celltype=CL:0000763!2.16e-28!112;CL:0000049!2.16e-28!112;CL:0000766!3.35e-23!76;CL:0002194!6.72e-21!63;CL:0000576!6.72e-21!63;CL:0000040!6.72e-21!63;CL:0000559!6.72e-21!63;CL:0000988!2.26e-20!182;CL:0002009!4.23e-20!65;CL:0000557!6.02e-20!71;CL:0000839!3.00e-19!70;CL:0000037!4.08e-19!172;CL:0000566!4.08e-19!172;CL:0002320!1.71e-18!365;CL:0002032!2.26e-18!165;CL:0000837!2.26e-18!165;CL:0000134!7.91e-18!358;CL:0000034!2.62e-15!444;CL:0002057!5.30e-15!42;CL:0000219!2.59e-14!390;CL:0000738!2.62e-14!140;CL:0000048!3.08e-14!430;CL:0000860!1.27e-13!45;CL:0000723!1.56e-13!436;CL:0000144!1.80e-12!625;CL:0002371!8.81e-12!591;CL:0002087!7.56e-11!119;CL:0002031!1.58e-09!124;CL:0000012!5.86e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.26e-12;39!CL:0000234;4.26e-12;39!CL:0000576;1.13e-11;48!CL:0000860;1.81e-11;33!CL:0002057;1.81e-11;33!CL:0000766;8.98e-11;69!CL:0000763;5.55e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.26e-29,108;CL:0000049,1.26e-29,108;CL:0000766,1.33e-24,72;CL:0002194,3.41e-22,59;CL:0000576,3.41e-22,59;CL:0000040,3.41e-22,59;CL:0000559,3.41e-22,59;CL:0000988,6.81e-22,177;CL:0002009,2.67e-21,61;CL:0000557,3.25e-21,67;CL:0000839,1.74e-20,66;CL:0000037,2.34e-20,168;CL:0002320,8.35e-20,361;CL:0002032,1.02e-19,161;CL:0000837,1.02e-19,161;CL:0000134,4.07e-19,354;CL:0000473,6.92e-18,48;CL:0000234,6.92e-18,48;CL:0000034,7.65e-16,441;CL:0000738,1.57e-15,136;CL:0000219,2.30e-15,386;CL:0000860,3.56e-15,42;CL:0002057,3.56e-15,42;CL:0000048,7.75e-15,427;CL:0000723,5.02e-14,433;CL:0002087,7.80e-12,115;CL:0002031,1.73e-10,120 | |||
|ontology_enrichment_development_v019=CL:0002057;4.76e-11;42!CL:0000049;2.70e-09;108 | |||
|ontology_enrichment_disease=DOID:8692!1.09e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.80e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,9.10e-08,31;DOID:2531,7.95e-07,51;DOID:0060083,7.95e-07,51;DOID:1240,8.76e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.67e-21!102;UBERON:0003061!2.67e-21!102;UBERON:0002193!1.46e-19!112;UBERON:0002384!2.43e-18!375;UBERON:0002371!4.68e-18!80;UBERON:0001474!1.74e-17!86;UBERON:0002405!6.15e-17!115;UBERON:0004765!1.52e-15!101;UBERON:0001434!1.52e-15!101;UBERON:0003081!4.25e-14!216;UBERON:0002204!6.08e-09!167;UBERON:0000478!8.44e-08!24;UBERON:0005631!1.08e-07!14;UBERON:0000158!1.08e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.95e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.34e-22,98;UBERON:0003061,2.34e-22,98;UBERON:0002193,2.27e-20,108;UBERON:0002384,1.21e-19,371;UBERON:0002371,4.36e-19,76;UBERON:0001474,2.03e-18,82;UBERON:0004765,4.77e-17,90;UBERON:0002405,6.70e-17,93;UBERON:0001434,4.87e-16,100;UBERON:0003081,1.91e-12,203;UBERON:0002204,1.16e-08,167;UBERON:0000478,3.72e-08,24;UBERON:0005631,9.03e-08,14;UBERON:0000158,9.03e-08,14;UBERON:0000926,1.29e-07,315;UBERON:0004120,1.29e-07,315;UBERON:0006603,1.29e-07,315 | |||
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| ||
|short_description=p1@ARID3A | |||
}} | }} |
Latest revision as of 01:50, 25 September 2015
Short description: | p1@ARID3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARID3A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000263620, NM_005224, uc002lql.2_5end |
EntrezGene: | ARID3A |
HGNC: | 3031 |
UniProt: | Q99856 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.26e-29 | 108 |
common myeloid progenitor | 1.26e-29 | 108 |
myeloid leukocyte | 1.33e-24 | 72 |
monopoietic cell | 3.41e-22 | 59 |
monocyte | 3.41e-22 | 59 |
monoblast | 3.41e-22 | 59 |
promonocyte | 3.41e-22 | 59 |
hematopoietic cell | 6.81e-22 | 177 |
macrophage dendritic cell progenitor | 2.67e-21 | 61 |
granulocyte monocyte progenitor cell | 3.25e-21 | 67 |
myeloid lineage restricted progenitor cell | 1.74e-20 | 66 |
hematopoietic stem cell | 2.34e-20 | 168 |
connective tissue cell | 8.35e-20 | 361 |
hematopoietic oligopotent progenitor cell | 1.02e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-19 | 161 |
mesenchymal cell | 4.07e-19 | 354 |
defensive cell | 6.92e-18 | 48 |
phagocyte | 6.92e-18 | 48 |
stem cell | 7.65e-16 | 441 |
leukocyte | 1.57e-15 | 136 |
motile cell | 2.30e-15 | 386 |
classical monocyte | 3.56e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.56e-15 | 42 |
multi fate stem cell | 7.75e-15 | 427 |
somatic stem cell | 5.02e-14 | 433 |
nongranular leukocyte | 7.80e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.73e-10 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.34e-22 | 98 |
blood island | 2.34e-22 | 98 |
hemolymphoid system | 2.27e-20 | 108 |
connective tissue | 1.21e-19 | 371 |
bone marrow | 4.36e-19 | 76 |
bone element | 2.03e-18 | 82 |
skeletal element | 4.77e-17 | 90 |
immune system | 6.70e-17 | 93 |
skeletal system | 4.87e-16 | 100 |
lateral plate mesoderm | 1.91e-12 | 203 |
musculoskeletal system | 1.16e-08 | 167 |
extraembryonic structure | 3.72e-08 | 24 |
extraembryonic membrane | 9.03e-08 | 14 |
membranous layer | 9.03e-08 | 14 |
mesoderm | 1.29e-07 | 315 |
mesoderm-derived structure | 1.29e-07 | 315 |
presumptive mesoderm | 1.29e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 9.10e-08 | 31 |
hematologic cancer | 7.95e-07 | 51 |
immune system cancer | 7.95e-07 | 51 |
leukemia | 8.76e-07 | 39 |