FFCP PHASE1:Hg19::chr19:10697917..10697993,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10053 | |EntrezGene=10053 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=558 | |HGNC=558 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6Q5 | |UniProt=Q9Y6Q5 | ||
|association_with_transcript=0bp_to_ENST00000250244,NM_005498,uc002mpc.2,uc002mpd.2_5end | |association_with_transcript=0bp_to_ENST00000250244,NM_005498,uc002mpc.2,uc002mpd.2_5end | ||
|cluster_id=chr19:10697917..10697993,- | |||
|coexpression_cluster_id=C543 | |||
|description=CAGE_peak_1_at_AP1M2_5end | |description=CAGE_peak_1_at_AP1M2_5end | ||
|id=chr19:10697917..10697993,- | |id=chr19:10697917..10697993,- | ||
|ontology_enrichment_celltype=CL:0000066!3.44e-26!254;CL:0002076!4.23e-21!43;CL:0000223!1.13e-15!59;CL:0002368!1.05e-10!13;CL:0002251!5.43e-10!21;CL:0002159!6.04e-09!13;CL:0002202!6.80e-08!9;CL:0002632!6.80e-08!9 | |ontology_enrichment_celltype=CL:0000066!3.44e-26!254;CL:0002076!4.23e-21!43;CL:0000223!1.13e-15!59;CL:0002368!1.05e-10!13;CL:0002251!5.43e-10!21;CL:0002159!6.04e-09!13;CL:0002202!6.80e-08!9;CL:0002632!6.80e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002076;8.39e-20;42!CL:0002251;1.97e-12;20!CL:0002368;3.06e-12;13!CL:0002159;2.74e-09;14!CL:0002202;5.44e-09;9!CL:0002632;5.44e-09;9!CL:0000039;1.77e-07;7!CL:0000586;1.77e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.71e-30,253;CL:0002076,1.02e-25,42;CL:0000223,1.04e-18,58;CL:0002251,1.84e-12,20;CL:0002368,3.09e-12,13;CL:0002159,2.64e-09,14;CL:0002202,5.47e-09,9;CL:0002632,5.47e-09,9;CL:0000039,1.72e-07,7;CL:0000586,1.72e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000223;9.27e-10;58!UBERON:0009117;3.86e-07;10!UBERON:0005564;3.86e-07;10 | |||
|ontology_enrichment_disease=DOID:305!3.28e-14!106;DOID:1749!1.26e-11!14;DOID:0050687!2.58e-08!143;DOID:299!3.70e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.36e-13;14!DOID:299;8.23e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.06e-15,106;DOID:1749,3.35e-13,14;DOID:0050687,5.38e-10,143;DOID:299,8.23e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.58e-21!169;UBERON:0000925!1.58e-21!169;UBERON:0006595!1.58e-21!169;UBERON:0001007!2.89e-15!155;UBERON:0001555!2.89e-15!155;UBERON:0007026!2.89e-15!155;UBERON:0000464!2.06e-13!104;UBERON:0004921!1.43e-12!129;UBERON:0004185!1.43e-12!129;UBERON:0000077!1.01e-11!130;UBERON:0001004!1.30e-11!72;UBERON:0000466!1.79e-11!126;UBERON:0005156!9.47e-10!59;UBERON:0000990!9.47e-10!59;UBERON:0005911!9.88e-10!82;UBERON:0000161!1.35e-09!35;UBERON:0005631!5.60e-09!14;UBERON:0000158!5.60e-09!14;UBERON:0005153!9.12e-09!37;UBERON:0003133!1.24e-08!48;UBERON:0001008!3.50e-08!45;UBERON:0006554!7.82e-08!44;UBERON:0000065!1.34e-07!53;UBERON:0004175!1.46e-07!25;UBERON:0005178!1.56e-07!34;UBERON:0002224!1.56e-07!34;UBERON:0000166!1.71e-07!21;UBERON:0000062!2.40e-07!511;UBERON:0002553!2.72e-07!70;UBERON:0003101!3.36e-07!22;UBERON:0000079!3.36e-07!22;UBERON:0005181!3.87e-07!35;UBERON:0003124!3.87e-07!7;UBERON:0000344!4.05e-07!12;UBERON:0000922!5.78e-07!612;UBERON:0003135!5.99e-07!11;UBERON:0000468!7.62e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.15e-10;33!UBERON:0005178;2.81e-08;34!UBERON:0002224;2.81e-08;34!UBERON:0005911;4.59e-08;36!UBERON:0003135;7.17e-08;11!UBERON:0001555;7.95e-08;54!UBERON:0000161;1.15e-07;19!UBERON:0000166;1.15e-07;19!UBERON:0003101;1.65e-07;22!UBERON:0000079;1.65e-07;22!UBERON:0005181;1.71e-07;35!UBERON:0000365;3.56e-07;5!UBERON:0004807;3.57e-07;22!UBERON:0000344;4.74e-07;20!UBERON:0005409;7.03e-07;22!UBERON:0006554;9.51e-07;30!UBERON:0001008;9.51e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.97e-24,160;UBERON:0000925,3.97e-24,160;UBERON:0006595,3.97e-24,160;UBERON:0001007,4.76e-17,145;UBERON:0001555,4.76e-17,145;UBERON:0007026,4.76e-17,145;UBERON:0004921,2.74e-14,118;UBERON:0001004,3.53e-13,74;UBERON:0001008,5.79e-12,48;UBERON:0006554,1.57e-11,47;UBERON:0005156,9.57e-11,59;UBERON:0000990,9.57e-11,59;UBERON:0005631,2.58e-10,14;UBERON:0000158,2.58e-10,14;UBERON:0005911,3.53e-10,82;UBERON:0000161,4.65e-10,36;UBERON:0003133,6.14e-10,48;UBERON:0005153,9.19e-10,37;UBERON:0005178,3.80e-09,34;UBERON:0002224,3.80e-09,34;UBERON:0004175,5.53e-09,25;UBERON:0005181,1.03e-08,35;UBERON:0000065,1.30e-08,54;UBERON:0005157,2.95e-08,47;UBERON:0000166,3.69e-08,22;UBERON:0003124,5.15e-08,7;UBERON:0001041,6.33e-08,87;UBERON:0003135,7.01e-08,11;UBERON:0000915,9.54e-08,52;UBERON:0005177,1.03e-07,101;UBERON:0003101,1.61e-07,22;UBERON:0000079,1.61e-07,22;UBERON:0003100,2.52e-07,41;UBERON:0000365,3.65e-07,5;UBERON:0000344,4.64e-07,20;UBERON:0003975,6.34e-07,22;UBERON:0005795,6.60e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,59.9590805063682,252.604022806019,100.701472552009,106.561859204295,0,0,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0.77408061658038,96.5392285702873,90.9641874710315,101.3125987857,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0,0,0.087834785693126,10.936752804059,135.882142533118,87.5051284971253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,92.8880331063598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.9782559489891,44.7303637768969,35.8505744236255,62.694484950612,59.9034552813113,61.3504018351057,34.415470265103,55.2582663417626,13.8691396448815,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,43.7838841213484,0,66.837923813853,147.246296767482,54.9893479091621,71.6634565527019,0,0,0,0,0,0,0,0,140.656382836751,157.102967663362,0,0,0.148631162288728,83.4231122482315,47.2029780238795,46.3604567982604,28.4796102195058,39.2355816993849,87.4112508496681,0,0,0.207328115540772,0.288239906833923,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,5.17365356462525,0,0.921845842708516,0,0,0,0,0,0,102.457119148836,88.2107829405634,108.255725012026,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0.116210378459959,56.8039413080624,82.0071463540435,61.1417766534352,0,0,0,77.1551338071674,40.664097991131,10.1965469992991,5.84556898613043,9.60519822925169,0,0,0,0,0.270946437543853,0,56.3276563429535,112.195261205378,8.50724067944278,0,0,0,0,0,14.2196596073857,0,0,68.3375990215445,65.6560848496886,0,0,0,0,0,0,0,0,0,63.1388376678936,36.9004929341004,38.2838137483752,32.0670165312093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,79.864353562175,119.31380504537,119.780083347455,13.4625635110794,102.890784068424,92.6593116171941,162.73886634796,70.9845306639505,0,0,0,0,0,0.648473311192717,0,0,0,0,40.4316356368702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.8849729306303,0,0,0,0,35.8116727106535,46.3264902098916,28.5659452952286,0,0,0,0,18.1567850990074,4.18420775327246,7.73594963487214,54.6694062843779,0,0,0,72.5237593758928,23.6307950571804,0,4.83352687620975,0,0,0,0,0,60.9400960939446,54.5750399976261,4.34999745260876,47.4518679350534,34.0699891392307,40.1859059005492,0,0,0,0,0,0,0,0.295547618953547,0,0,45.4521406348247,7.46417507486832,0,26.0537211958508,60.7659252654157,45.5232488353214,39.556143806758,22.3498127900544,41.5767125294535,0,0,0,0,0,0,0,0,0,94.3485631159874,57.9547592879157,0,50.7583584850037,29.8101992376253,29.9404771017476,0,0,0,0.134802265961354,0,0,0,19.3707972742769,0,55.6364008017641,21.7783288887595,0.30607276163049,0,0,0,0,0,0,0,10.2459436570725,0,112.29315070283,18.3245783164886,49.3625701310882,25.8595468998205,0,0,0,0,24.2472541221049,0,5.64951851951331,0,0,0,60.2298258823193,14.8293817465337,43.3309579320886,0,55.9070818557931,0,0,0,0,23.5694034616795,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0.717873024576814,18.3704680459072,0,0,0,0,16.3094329338435,0,0,0,0,0,0,0,85.0384155379951,87.3375422392435,83.9189482818954,0.2249738915515,6.1904156364636,0,45.2836828259009,24.666186384649,26.594476184444,0,0,16.3127917721528,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0.13223260174269,0,26.0781558257169,15.4841748223157,4.87333345808964,16.1553231585406,0,0,0,60.6424194881673,0,0,0,0,24.6574931112868,0,0,0,0,0,0.372578417648301,0,0,0,0,0,0,18.4049706335748,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,42.473736795084,0,0,0,0,0,48.9578277018056,32.3480175217146,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,89.2162761174323,48.9574351893122,39.6205772806827,42.6289708094748,0,0,0,4.88867134270172,0,39.0757005616546,86.9530225678322,0.163771917510097,32.2326267953159,0,0,0,0,0.546974809018219,46.0536524160033,6.94695649745012,0,47.0165733713711,1.07140367175657,2.35398605553177,25.4925553779385,20.0342728389142,35.5696504352182,0,0,0,0,0.709163045303809,15.7948590686738,12.7158810417833,0,34.473476087596,9.13158720509496,0,0,0,0,0,0,0,1.65772931330429,1.87790324803345,2.07377898544228,38.720462293825,0,0,47.4193496213841,44.4467324975457,0,0,56.2632821942895,44.9528069957813,66.4452691153368,0.647428837187895,0,0,5.82853191670967,55.9115317674432,47.1513337132443,0,35.0132854320776,0,35.7781939253016,44.0664442796364,34.7509701201292,120.40122786855,0.490296643507811,35.5871586123455,0,0,0,0,0,0,0,27.4973065452713,89.9881922875014,45.0154067126234,24.8314372003816,27.0650277208679,0,0,0,0.436350690340377,36.5028519955626,0,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| ||
|short_description=p1@AP1M2 | |short_description=p1@AP1M2 | ||
}} | }} |
Latest revision as of 02:19, 25 September 2015
Short description: | p1@AP1M2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AP1M2_5end |
Coexpression cluster: | C543_Alveolar_Corneal_Urothelial_amniotic_Esophageal_Tracheal_esophagus |
Association with transcript: | 0bp_to_ENST00000250244, NM_005498, uc002mpc.2, uc002mpd.2_5end |
EntrezGene: | AP1M2 |
HGNC: | 558 |
UniProt: | Q9Y6Q5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.71e-30 | 253 |
endo-epithelial cell | 1.02e-25 | 42 |
endodermal cell | 1.04e-18 | 58 |
epithelial cell of alimentary canal | 1.84e-12 | 20 |
respiratory epithelial cell | 3.09e-12 | 13 |
general ecto-epithelial cell | 2.64e-09 | 14 |
epithelial cell of tracheobronchial tree | 5.47e-09 | 9 |
epithelial cell of lower respiratory tract | 5.47e-09 | 9 |
germ line cell | 1.72e-07 | 7 |
germ cell | 1.72e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.06e-15 | 106 |
squamous cell carcinoma | 3.35e-13 | 14 |
cell type cancer | 5.38e-10 | 143 |
adenocarcinoma | 8.23e-09 | 25 |