FFCP PHASE2:Hg19::chr19:10959043..10959111,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:255809 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:34073 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=255809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=34073 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=A8MVS5 | ||
|association_with_transcript=0bp_to_ENST00000397820,NM_001136482,uc010dxm.1_5end | |association_with_transcript=0bp_to_ENST00000397820,NM_001136482,uc010dxm.1_5end | ||
|cluster_id=chr19:10959043..10959111,+ | |cluster_id=chr19:10959043..10959111,+ | ||
Latest revision as of 03:16, 25 September 2015
| Short description: | p1@C19orf38 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_C19orf38_5end |
| Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
| Association with transcript: | 0bp_to_ENST00000397820, NM_001136482, uc010dxm.1_5end |
| EntrezGene: | C19orf38 |
| HGNC: | 34073 |
| UniProt: | A8MVS5 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@C19orf38 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic stem cell | 3.39e-57 | 168 |
| hematopoietic cell | 1.24e-55 | 177 |
| myeloid leukocyte | 7.04e-54 | 72 |
| hematopoietic oligopotent progenitor cell | 5.70e-53 | 161 |
| hematopoietic multipotent progenitor cell | 5.70e-53 | 161 |
| monopoietic cell | 2.11e-52 | 59 |
| monocyte | 2.11e-52 | 59 |
| monoblast | 2.11e-52 | 59 |
| promonocyte | 2.11e-52 | 59 |
| myeloid cell | 3.95e-52 | 108 |
Showing 1 to 10 of 27 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 3.38e-52 | 98 |
| blood island | 3.38e-52 | 98 |
| hemolymphoid system | 6.90e-47 | 108 |
| bone marrow | 3.04e-38 | 76 |
| immune system | 7.36e-35 | 93 |
| bone element | 1.31e-33 | 82 |
| skeletal element | 1.91e-28 | 90 |
| skeletal system | 3.10e-23 | 100 |
| lateral plate mesoderm | 6.23e-18 | 203 |
| adult organism | 3.44e-16 | 114 |
Showing 1 to 10 of 15 entries
