FFCP PHASE1:Hg19::chr3:142166796..142166841,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:142166796..142166841,-
|short_description=p3@XRN1
|description=CAGE_peak_3_at_XRN1_5end
|association_with_transcript=0bp_to_ENST00000392981_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54464 | |EntrezGene=54464 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30654 | |HGNC=30654 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000392981_5end | |||
|cluster_id=chr3:142166796..142166841,- | |||
|coexpression_cluster_id=C451 | |||
|description=CAGE_peak_3_at_XRN1_5end | |||
|id=chr3:142166796..142166841,- | |||
|ontology_enrichment_celltype=CL:0000738!1.51e-51!140;CL:0000037!2.28e-43!172;CL:0000566!2.28e-43!172;CL:0002031!1.46e-42!124;CL:0002087!5.12e-41!119;CL:0000988!1.95e-40!182;CL:0002032!9.45e-40!165;CL:0000837!9.45e-40!165;CL:0000766!2.10e-23!76;CL:0000542!8.17e-22!53;CL:0000051!8.17e-22!53;CL:0002057!1.23e-21!42;CL:0000838!1.52e-21!52;CL:0000557!5.01e-20!71;CL:0000860!1.03e-19!45;CL:0000839!1.22e-19!70;CL:0000763!3.87e-18!112;CL:0000049!3.87e-18!112;CL:0002009!8.89e-18!65;CL:0002194!4.11e-17!63;CL:0000576!4.11e-17!63;CL:0000040!4.11e-17!63;CL:0000559!4.11e-17!63;CL:0000134!5.55e-11!358;CL:0000791!6.33e-11!18;CL:0000789!6.33e-11!18;CL:0002420!6.33e-11!18;CL:0002419!6.33e-11!18;CL:0000790!6.33e-11!18;CL:0000084!7.11e-11!25;CL:0000827!7.11e-11!25;CL:0002320!4.12e-10!365;CL:0000945!4.42e-10!24;CL:0000826!4.42e-10!24;CL:0000625!1.69e-07!11;CL:0000219!2.41e-07!390;CL:0000236!4.42e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.41e-16;33!CL:0002057;4.41e-16;33!CL:0002087;1.92e-14;104!CL:0000576;2.49e-14;48!CL:0000542;1.70e-12;53!CL:0000473;4.81e-12;39!CL:0000234;4.81e-12;39!CL:0000766;1.79e-11;69!CL:0000738;4.29e-11;136!CL:0000791;4.45e-11;18!CL:0000789;4.45e-11;18!CL:0002419;4.45e-11;18!CL:0000084;5.47e-11;25!CL:0000945;3.16e-10;24!CL:0000988;5.62e-08;177!CL:0000625;1.29e-07;11!CL:0000236;9.46e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.30e-54,136;CL:0000037,2.51e-45,168;CL:0002031,7.20e-45,120;CL:0002087,2.49e-43,115;CL:0000988,7.57e-43,177;CL:0002032,1.23e-41,161;CL:0000837,1.23e-41,161;CL:0000766,2.25e-25,72;CL:0000542,4.87e-22,53;CL:0000051,4.87e-22,53;CL:0000557,7.58e-22,67;CL:0000838,9.06e-22,52;CL:0000860,9.47e-22,42;CL:0002057,9.47e-22,42;CL:0000839,1.89e-21,66;CL:0002009,1.53e-19,61;CL:0000763,2.05e-19,108;CL:0000049,2.05e-19,108;CL:0000473,4.19e-19,48;CL:0000234,4.19e-19,48;CL:0002194,7.26e-19,59;CL:0000576,7.26e-19,59;CL:0000040,7.26e-19,59;CL:0000559,7.26e-19,59;CL:0000134,1.18e-11,354;CL:0000084,4.91e-11,25;CL:0000827,4.91e-11,25;CL:0000791,5.61e-11,18;CL:0000789,5.61e-11,18;CL:0002420,5.61e-11,18;CL:0002419,5.61e-11,18;CL:0000790,5.61e-11,18;CL:0002320,9.78e-11,361;CL:0000945,3.97e-10,24;CL:0000826,3.97e-10,24;CL:0000219,9.99e-08,386;CL:0000625,1.56e-07,11;CL:0000236,4.12e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;6.99e-16;42!CL:0000051;1.70e-12;53!CL:0000790;4.45e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.38e-27!112;UBERON:0002390!6.99e-27!102;UBERON:0003061!6.99e-27!102;UBERON:0002371!5.58e-18!80;UBERON:0001474!1.52e-16!86;UBERON:0002405!1.88e-16!115;UBERON:0004765!3.70e-13!101;UBERON:0001434!3.70e-13!101;UBERON:0002384!6.11e-10!375;UBERON:0000178!6.78e-08!15;UBERON:0000179!6.78e-08!15;UBERON:0000463!6.78e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.14e-08;15!UBERON:0000179;5.14e-08;15!UBERON:0000463;5.14e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.51e-28,98;UBERON:0003061,1.51e-28,98;UBERON:0002193,1.95e-28,108;UBERON:0002405,8.95e-22,93;UBERON:0002371,2.05e-19,76;UBERON:0001474,8.39e-18,82;UBERON:0004765,1.56e-15,90;UBERON:0001434,8.91e-14,100;UBERON:0002384,1.52e-10,371;UBERON:0000178,6.25e-08,15;UBERON:0000179,6.25e-08,15;UBERON:0000463,6.25e-08,15 | |||
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| ||
|short_description=p3@XRN1 | |||
}} | }} |
Latest revision as of 04:37, 25 September 2015
Short description: | p3@XRN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_XRN1_5end |
Coexpression cluster: | C451_CD14_CD4_Eosinophils_Neutrophils_adult_Natural_CD8 |
Association with transcript: | 0bp_to_ENST00000392981_5end |
EntrezGene: | XRN1 |
HGNC: | 30654 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.51e-28 | 98 |
blood island | 1.51e-28 | 98 |
hemolymphoid system | 1.95e-28 | 108 |
immune system | 8.95e-22 | 93 |
bone marrow | 2.05e-19 | 76 |
bone element | 8.39e-18 | 82 |
skeletal element | 1.56e-15 | 90 |
skeletal system | 8.91e-14 | 100 |
connective tissue | 1.52e-10 | 371 |
blood | 6.25e-08 | 15 |
haemolymphatic fluid | 6.25e-08 | 15 |
organism substance | 6.25e-08 | 15 |