FFCP PHASE1:Hg19::chr8:11705305..11705335,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1508 | |EntrezGene=1508 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2527 | |HGNC=2527 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_ENST00000526481_5end | |association_with_transcript=4bp_to_ENST00000526481_5end | ||
|cluster_id=chr8:11705305..11705335,- | |||
|coexpression_cluster_id=C71 | |coexpression_cluster_id=C71 | ||
|description=CAGE_peak_5_at_CTSB_5end | |description=CAGE_peak_5_at_CTSB_5end | ||
|id=chr8:11705305..11705335,- | |id=chr8:11705305..11705335,- | ||
|ontology_enrichment_celltype=CL:0000473;1.07e-17;39!CL:0000234;1.07e-17;39!CL:0000860;3.25e-16;33!CL:0002057;3.25e-16;33!CL:0000576;1.63e-09;48 | |ontology_enrichment_celltype=CL:0002194!3.82e-14!63;CL:0000576!3.82e-14!63;CL:0000040!3.82e-14!63;CL:0000559!3.82e-14!63;CL:0002009!1.06e-12!65;CL:0002057!4.48e-12!42;CL:0000839!9.57e-12!70;CL:0002371!1.16e-10!591;CL:0000557!1.46e-10!71;CL:0000860!3.08e-10!45;CL:0000144!6.88e-09!625;CL:0000055!3.61e-08!180;CL:0000766!3.84e-08!76;CL:0000222!3.19e-07!119;CL:0000048!3.75e-07!430;CL:0000057!4.01e-07!75 | ||
| | |ontology_enrichment_celltype_v019=CL:0000473;1.07e-17;39!CL:0000234;1.07e-17;39!CL:0000860;3.25e-16;33!CL:0002057;3.25e-16;33!CL:0000576;1.63e-09;48 | ||
|ontology_enrichment_disease=DOID:2394;6.87e-07;14 | |ontology_enrichment_celltype_v019_2=CL:0002194,2.00e-18,59;CL:0000576,2.00e-18,59;CL:0000040,2.00e-18,59;CL:0000559,2.00e-18,59;CL:0000473,1.58e-17,48;CL:0000234,1.58e-17,48;CL:0002009,3.99e-17,61;CL:0000839,9.12e-15,66;CL:0000557,8.99e-14,67;CL:0000860,3.18e-13,42;CL:0002057,3.18e-13,42;CL:0000048,1.23e-12,427;CL:0000723,3.72e-12,433;CL:0000766,1.72e-11,72;CL:0000034,7.44e-11,441;CL:0000134,2.90e-09,354;CL:0002320,3.57e-09,361;CL:0000057,4.95e-08,76;CL:0000219,1.23e-07,386 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019=CL:0002057;2.64e-10;42 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;6.87e-07;14 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.58e-13!167;UBERON:0000468!5.35e-12!659;UBERON:0000467!2.95e-11!625;UBERON:0000480!4.05e-11!626;UBERON:0000926!4.46e-11!448;UBERON:0004120!4.46e-11!448;UBERON:0006603!4.46e-11!448;UBERON:0003081!1.73e-10!216;UBERON:0002371!1.28e-09!80;UBERON:0004765!2.66e-09!101;UBERON:0001434!2.66e-09!101;UBERON:0002405!6.20e-08!115;UBERON:0001474!6.31e-08!86;UBERON:0003102!2.74e-07!95;UBERON:0000923!6.19e-07!604;UBERON:0005291!6.19e-07!604;UBERON:0006598!6.19e-07!604;UBERON:0002532!6.19e-07!604;UBERON:0002050!9.84e-07!605;UBERON:0005423!9.84e-07!605 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,5.97e-19,315;UBERON:0004120,5.97e-19,315;UBERON:0006603,5.97e-19,315;UBERON:0002204,7.38e-15,167;UBERON:0003081,6.63e-14,203;UBERON:0002371,1.50e-12,76;UBERON:0001434,2.56e-11,100;UBERON:0004765,4.56e-11,90;UBERON:0001474,7.40e-11,82;UBERON:0002405,2.05e-10,93;UBERON:0002384,6.31e-09,371;UBERON:0002193,2.09e-08,108;UBERON:0002390,4.33e-08,98;UBERON:0003061,4.33e-08,98;UBERON:0003102,1.79e-07,99 | |||
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| ||
|short_description=p5@CTSB | |short_description=p5@CTSB | ||
}} | }} |
Latest revision as of 07:13, 25 September 2015
Short description: | p5@CTSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CTSB_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | 4bp_to_ENST00000526481_5end |
EntrezGene: | CTSB |
HGNC: | 2527 |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.00e-18 | 59 |
monocyte | 2.00e-18 | 59 |
monoblast | 2.00e-18 | 59 |
promonocyte | 2.00e-18 | 59 |
defensive cell | 1.58e-17 | 48 |
phagocyte | 1.58e-17 | 48 |
macrophage dendritic cell progenitor | 3.99e-17 | 61 |
myeloid lineage restricted progenitor cell | 9.12e-15 | 66 |
granulocyte monocyte progenitor cell | 8.99e-14 | 67 |
classical monocyte | 3.18e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.18e-13 | 42 |
multi fate stem cell | 1.23e-12 | 427 |
somatic stem cell | 3.72e-12 | 433 |
myeloid leukocyte | 1.72e-11 | 72 |
stem cell | 7.44e-11 | 441 |
mesenchymal cell | 2.90e-09 | 354 |
connective tissue cell | 3.57e-09 | 361 |
fibroblast | 4.95e-08 | 76 |
motile cell | 1.23e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 5.97e-19 | 315 |
mesoderm-derived structure | 5.97e-19 | 315 |
presumptive mesoderm | 5.97e-19 | 315 |
musculoskeletal system | 7.38e-15 | 167 |
lateral plate mesoderm | 6.63e-14 | 203 |
bone marrow | 1.50e-12 | 76 |
skeletal system | 2.56e-11 | 100 |
skeletal element | 4.56e-11 | 90 |
bone element | 7.40e-11 | 82 |
immune system | 2.05e-10 | 93 |
connective tissue | 6.31e-09 | 371 |
hemolymphoid system | 2.09e-08 | 108 |
hematopoietic system | 4.33e-08 | 98 |
blood island | 4.33e-08 | 98 |
surface structure | 1.79e-07 | 99 |