FFCP PHASE1:Hg19::chr1:10532522..10532527,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:10532522..10532527,-
|short_description=p4@DFFA
|description=CAGE_peak_4_at_DFFA_5end
|association_with_transcript=8bp_to_ENST00000476658_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1676 | |EntrezGene=1676 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2772 | |HGNC=2772 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_ENST00000476658_5end | |||
|cluster_id=chr1:10532522..10532527,- | |||
|description=CAGE_peak_4_at_DFFA_5end | |||
|id=chr1:10532522..10532527,- | |||
|ontology_enrichment_celltype=CL:0000066!2.30e-11!254;CL:0002321!8.20e-10!248;CL:0000220!3.42e-09!246;CL:1000449!9.61e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000746;3.62e-14;7!CL:1000612;3.62e-14;7!CL:1000449;4.34e-12;15!CL:0002681;2.01e-11;12!CL:0002584;2.01e-11;12!CL:1000497;1.51e-10;17!CL:0002518;1.51e-10;17!CL:0000669;2.07e-09;4!CL:0000650;7.90e-09;2!CL:1000500;7.90e-09;2!CL:1000618;7.90e-09;2!CL:1001318;7.90e-09;2!CL:0002173;7.90e-09;2!CL:0002188;7.16e-08;5!CL:0000115;8.23e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,2.83e-14,7;CL:1000612,2.83e-14,7;CL:1000449,2.09e-12,15;CL:0002681,1.12e-11,12;CL:0002584,1.12e-11,12;CL:1000497,7.99e-11,17;CL:0002518,7.99e-11,17;CL:0000669,1.17e-09,4;CL:0000650,4.25e-09,2;CL:1000500,4.25e-09,2;CL:1000618,4.25e-09,2;CL:1001318,4.25e-09,2;CL:0002173,4.25e-09,2;CL:0002188,8.35e-08,5;CL:0000115,3.00e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.61e-07!239;DOID:162!4.24e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004211!9.61e-07!16;UBERON:0001285!9.61e-07!16;UBERON:0007684!9.61e-07!16;UBERON:0003220!9.61e-07!16;UBERON:0004208!9.61e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;3.62e-14;7!UBERON:0001229;3.62e-14;7!UBERON:0006555;4.34e-12;15!UBERON:0000353;4.34e-12;15!UBERON:0004819;4.34e-12;15!UBERON:0001285;4.34e-12;15!UBERON:0007684;4.34e-12;15!UBERON:0002113;9.23e-12;24!UBERON:0011143;9.23e-12;24!UBERON:0001225;2.01e-11;12!UBERON:0008987;2.01e-11;12!UBERON:0000489;1.89e-09;29!UBERON:0006554;4.41e-09;30!UBERON:0001008;4.41e-09;30!UBERON:0001851;5.27e-09;15!UBERON:0003567;7.90e-09;2!UBERON:0003838;7.90e-09;2!UBERON:0003586;7.90e-09;2!UBERON:0005169;7.90e-09;2!UBERON:0002321;7.90e-09;2!UBERON:0005215;7.90e-09;2!UBERON:0002303;7.90e-09;2!UBERON:0002319;7.90e-09;2!UBERON:0000945;1.31e-07;5!UBERON:0010039;1.31e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,2.83e-14,7;UBERON:0000074,2.83e-14,7;UBERON:0001229,2.83e-14,7;UBERON:0001230,2.83e-14,7;UBERON:0003220,2.83e-14,7;UBERON:0005749,2.83e-14,7;UBERON:0004199,2.83e-14,7;UBERON:0004209,2.83e-14,7;UBERON:0004198,2.83e-14,7;UBERON:0005103,1.88e-12,8;UBERON:0000083,1.88e-12,8;UBERON:0009201,1.88e-12,8;UBERON:0006553,1.88e-12,8;UBERON:0003074,1.88e-12,8;UBERON:0003060,1.88e-12,8;UBERON:0004211,2.09e-12,15;UBERON:0009773,2.09e-12,15;UBERON:0001231,2.09e-12,15;UBERON:0001285,2.09e-12,15;UBERON:0007684,2.09e-12,15;UBERON:0004208,2.09e-12,15;UBERON:0000353,2.29e-12,15;UBERON:0001225,1.12e-11,12;UBERON:0008987,1.12e-11,12;UBERON:0006555,1.45e-11,16;UBERON:0004819,1.45e-11,16;UBERON:0002113,3.67e-11,26;UBERON:0003918,3.67e-11,26;UBERON:0011143,3.67e-11,26;UBERON:0005095,3.67e-11,26;UBERON:0007687,3.67e-11,26;UBERON:0000080,4.93e-11,9;UBERON:0002120,4.93e-11,9;UBERON:0004875,4.93e-11,9;UBERON:0005721,4.93e-11,9;UBERON:0005754,4.93e-11,9;UBERON:0007297,4.93e-11,9;UBERON:0001851,3.34e-09,15;UBERON:0003567,4.25e-09,2;UBERON:0003838,4.25e-09,2;UBERON:0003586,4.25e-09,2;UBERON:0005169,4.25e-09,2;UBERON:0002321,4.25e-09,2;UBERON:0005215,4.25e-09,2;UBERON:0002303,4.25e-09,2;UBERON:0002319,4.25e-09,2;UBERON:0000489,4.33e-09,31;UBERON:0004876,5.74e-09,11;UBERON:0003887,3.43e-08,12;UBERON:0000058,4.85e-07,19 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0.631719873426831,0.261185628199839,0,0.697801167972428,0.873765488520689,0,0.247532705920093,0,0,0,1.46062018077475,0,0.861847406537515,0.408001382488506,0.626909442956176,0.286235987131057,0,0.125542639594803,0.458480434487708,0.0821005894499457,0.787107813136792,0.393364276848904,0,0,0,0.30120591877825,0.369754010166788,0.154934401160603,0.995184627411951,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0.552700035571697,0,0,0,0,0.226618685395132,0,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0,0.283604451492204,0.221729397462564,0.527008714158756,0.130979075497713,0,0.741568885568859,0,0.174129737299267,0,0,0.571994910780128,0,0.596287222100115,0.860234595106124,0.347140501607594,0,1.25849830862972,1.10047216776027,0.626984899610432,0.775250277507987,0.71153252537342,0.66944122552934,0,0,1.22031028774085,1.10298924103761,0.81014194788176,0.17859945656816,0.44905874525234,0.450445921933289,0,0.949265659568129,0.183201743930407,0,0,0,0,0.379891534993739,0.132409180813219,0.860509862246441,0.709336764396714,0,0,0.49333509683432,0,0.67355336034844,0.326923806226917,0.605429710579726,0.576175924479999,0,0.312160076830321,0,0,0.23486899728753,0,0.140450806702248,0,0.245668634623536,0.309977343527296,0,0,0,0,0.336672227908132,0,0.277064115484183,0.877955241761676,0.30648779579902,0,0.340296549480063,0.358779271377724,0,0,0,0,0,0.37223371266318,0,0.487185025805993,0,0.0920498986422993,0,0,0.10075209822764,0.339121184620975,0,0.272746120590835,0,0.975789649036763,1.32529768321485,0.813357600086629,0.829288440122964,0.252320850875628,1.09493207722749,0,0,1.38134921352481,0,0,0,0,0,0.110293972732394,0,0.474541238222193,0.134831308160164,0,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0.439001141634502,0,0.100528972411631,0.370353780634118,0,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0.858486162094873,0,0,0,0.93733833986777,0.16798212819886,0.283550194484773,0.895585227028483,0,1.53353071666084,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0.87192013766656,0,0,0,1.690605505112,0.26593811658487,1.04007436911366,0.514414748524284,1.41849132023278,1.0656887160644,0.142977993658148,1.08524321078289,0,0,0.355391948742546,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0.205476322550383,0.358121926479791,0.112085143993527,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0.542530047399471,0.207970861530807,0.892144943985809,0.157702415033935,0.117141414992713,0.601892199455438,0,0,0,0,0.347534457872331,0,1.37257369524342,0,0,0,0,0,1.20956117331872,0,0,0,0.256278298511402,0,0,0,0.616838775210622,0.355123450626254,0.574890092096664,0,0.232420756919918,0.483437798366489,0.40101294060657,0.0920809889358963,0.229628896329213,0,0.262248829918848,1.80479845162965,0,0.784349769176855,1.46139224653261,0.105551628892876,2.27466768141793,1.02056223165909,0.431831832204279,1.54227252690289,1.35473218771926,1.50506932156456,0.509752546090077,0.831076008928724,0.895499018888713,0,0.261435451024901,0.256450125116389,0.984043937099117,0,0,0.457847324091717,0.165018999841176,0,1.30012049207304,0,0.193341436584244,0.462145851343933,0.614014698904518,0,0.107420244868274,0.435050081742686,0.596586391912706,0.445160178233687,0.330569830721956,0.960950336825531,0.382838137483752,0.10115778085555,0.464845549297286,0,0,0.308033580176089,1.06461206063404,0,0.18532421910392,0.286249773483982,0,0,0.190630193923825,0.255897791311334,0,0,1.56989728039846,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0.842516912477962,0,0,1.05650146756755,0.136499911407986,0.424216295861138,1.13008116620243,0,0,0,0,0.655894752046633,0.202910376962704,0,0.281695602532241,0.143411352204052,0.294747123039363,0.7133421029625,0.354761064070598,0,0.329294892959902,1.89736586882858,0,0.288666338176536,0,2.17781969722645,0.0941438007767792,0.86101074534246,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,1.6023610669121,0,0.245040215981032,0.185803175125719,0.432807638929335,0.213425530045242,0,0,0.191505370132367,0,0.649243880549111,0,0,0,0,0.50787533340481,0,0.201799707191048,0,0,0,0,0.166849141711909,0.390776190804081,0,0,0,0.33307196799782,0,0.37428108081644,0.293016358543788,0.849523652246594,0.111443384277478,0,0,0.296964680832639,0,0,0.281338832821026,0.111308705022906,0.329607748453519,0.211125408127993,0.19924798825107,0,0.503865495708552,0.20453736500431,0.246169610922139,0,0.269605053441981,0,0,0,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0,0.254253650292766,0,0.689486746482929,0.874813840149763,0.694499979733169,0,0.241192877250816,0,0.331737779793674,0,0,0.21787692703798,0.278847488557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|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0.631719873426831,0.261185628199839,0,0.697801167972428,0.873765488520689,0,0.247532705920093,0,0,0,1.46062018077475,0,0.861847406537515,0.408001382488506,0.626909442956176,0.286235987131057,0,0.125542639594803,0.458480434487708,0.0821005894499457,0.787107813136792,0.393364276848904,0,0,0,0.30120591877825,0.369754010166788,0.154934401160603,0.995184627411951,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0.552700035571697,0,0,0,0,0.226618685395132,0,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0,0.283604451492204,0.221729397462564,0.527008714158756,0.130979075497713,0,0.741568885568859,0,0.174129737299267,0,0,0.571994910780128,0,0.596287222100115,0.860234595106124,0.347140501607594,0,1.25849830862972,1.10047216776027,0.626984899610432,0.775250277507987,0.71153252537342,0.66944122552934,0,0,1.22031028774085,1.10298924103761,0.81014194788176,0.17859945656816,0.44905874525234,0.450445921933289,0,0.949265659568129,0.183201743930407,0,0,0,0,0.379891534993739,0.132409180813219,0.860509862246441,0.709336764396714,0,0,0.49333509683432,0,0.67355336034844,0.326923806226917,0.605429710579726,0.576175924479999,0,0.312160076830321,0,0,0.23486899728753,0,0.140450806702248,0,0.245668634623536,0.309977343527296,0,0,0,0,0.336672227908132,0,0.277064115484183,0.877955241761676,0.30648779579902,0,0.340296549480063,0.358779271377724,0,0,0,0,0,0.37223371266318,0,0.487185025805993,0,0.0920498986422993,0,0,0.10075209822764,0.339121184620975,0,0.272746120590835,0,0.975789649036763,1.32529768321485,0.813357600086629,0.829288440122964,0.252320850875628,1.09493207722749,0,0,1.38134921352481,0,0,0,0,0,0.110293972732394,0,0.474541238222193,0.134831308160164,0,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0.439001141634502,0,0.100528972411631,0.370353780634118,0,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0.858486162094873,0,0,0,0.93733833986777,0.16798212819886,0.283550194484773,0.895585227028483,0,1.53353071666084,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0.87192013766656,0,0,0,1.690605505112,0.26593811658487,1.04007436911366,0.514414748524284,1.41849132023278,1.0656887160644,0.142977993658148,1.08524321078289,0,0,0.355391948742546,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0.205476322550383,0.358121926479791,0.112085143993527,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0.542530047399471,0.207970861530807,0.892144943985809,0.157702415033935,0.117141414992713,0.601892199455438,0,0,0,0,0.347534457872331,0,1.37257369524342,0,0,0,0,0,1.20956117331872,0,0,0,0.256278298511402,0,0,0,0.616838775210622,0.355123450626254,0.574890092096664,0,0.232420756919918,0.483437798366489,0.40101294060657,0.0920809889358963,0.229628896329213,0,0.262248829918848,1.80479845162965,0,0.784349769176855,1.46139224653261,0.105551628892876,2.27466768141793,1.02056223165909,0.431831832204279,1.54227252690289,1.35473218771926,1.50506932156456,0.509752546090077,0.831076008928724,0.895499018888713,0,0.261435451024901,0.256450125116389,0.984043937099117,0,0,0.457847324091717,0.165018999841176,0,1.30012049207304,0,0.193341436584244,0.462145851343933,0.614014698904518,0,0.107420244868274,0.435050081742686,0.596586391912706,0.445160178233687,0.330569830721956,0.960950336825531,0.382838137483752,0.10115778085555,0.464845549297286,0,0,0.308033580176089,1.06461206063404,0,0.18532421910392,0.286249773483982,0,0,0.190630193923825,0.255897791311334,0,0,1.56989728039846,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0.842516912477962,0,0,1.05650146756755,0.136499911407986,0.424216295861138,1.13008116620243,0,0,0,0,0.655894752046633,0.202910376962704,0,0.281695602532241,0.143411352204052,0.294747123039363,0.7133421029625,0.354761064070598,0,0.329294892959902,1.89736586882858,0,0.288666338176536,0,2.17781969722645,0.0941438007767792,0.86101074534246,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,1.6023610669121,0,0.245040215981032,0.185803175125719,0.432807638929335,0.213425530045242,0,0,0.191505370132367,0,0.649243880549111,0,0,0,0,0.50787533340481,0,0.201799707191048,0,0,0,0,0.166849141711909,0.390776190804081,0,0,0,0.33307196799782,0,0.37428108081644,0.293016358543788,0.849523652246594,0.111443384277478,0,0,0.296964680832639,0,0,0.281338832821026,0.111308705022906,0.329607748453519,0.211125408127993,0.19924798825107,0,0.503865495708552,0.20453736500431,0.246169610922139,0,0.269605053441981,0,0,0,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0,0.254253650292766,0,0.689486746482929,0.874813840149763,0.694499979733169,0,0.241192877250816,0,0.331737779793674,0,0,0.21787692703798,0.278847488557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| ||
|short_description=p4@DFFA | |||
}} | }} |
Latest revision as of 07:15, 25 September 2015
Short description: | p4@DFFA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DFFA_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000476658_5end |
EntrezGene: | DFFA |
HGNC: | 2772 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 2.83e-14 | 7 |
kidney corpuscule cell | 2.83e-14 | 7 |
epithelial cell of nephron | 2.09e-12 | 15 |
kidney cortical cell | 1.12e-11 | 12 |
renal cortical epithelial cell | 1.12e-11 | 12 |
kidney cell | 7.99e-11 | 17 |
kidney epithelial cell | 7.99e-11 | 17 |
pericyte cell | 1.17e-09 | 4 |
mesangial cell | 4.25e-09 | 2 |
kidney interstitial cell | 4.25e-09 | 2 |
juxtaglomerular complex cell | 4.25e-09 | 2 |
renal interstitial pericyte | 4.25e-09 | 2 |
extraglomerular mesangial cell | 4.25e-09 | 2 |
glomerular endothelial cell | 8.35e-08 | 5 |
endothelial cell | 3.00e-07 | 36 |