FFCP PHASE1:Hg19::chr12:100867777..100867788,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9971 | |EntrezGene=9971 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7967 | |HGNC=7967 | ||
|TSSclassifier=strong | |||
|UniProt=F8W1M1 | |UniProt=F8W1M1 | ||
|association_with_transcript=44bp_to_ENST00000546380_5end | |association_with_transcript=44bp_to_ENST00000546380_5end | ||
|cluster_id=chr12:100867777..100867788,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_5_at_NR1H4_5end | |description=CAGE_peak_5_at_NR1H4_5end | ||
|id=chr12:100867777..100867788,+ | |id=chr12:100867777..100867788,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.55e-19!12;CL:0000417!2.55e-19!12;CL:0000668!2.55e-19!12;CL:0000414!2.55e-19!12;CL:0000412!2.55e-19!12;CL:0000182!2.55e-19!12;CL:0002195!4.35e-11!2;CL:0002571!4.35e-11!2;CL:0002622!4.97e-07!3 | |ontology_enrichment_celltype=CL:0000181!2.55e-19!12;CL:0000417!2.55e-19!12;CL:0000668!2.55e-19!12;CL:0000414!2.55e-19!12;CL:0000412!2.55e-19!12;CL:0000182!2.55e-19!12;CL:0002195!4.35e-11!2;CL:0002571!4.35e-11!2;CL:0002622!4.97e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.24e-53;12!CL:0002195;4.73e-28;2!CL:0002571;4.73e-28;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.14e-53,12;CL:0002195,4.13e-28,2;CL:0002571,4.13e-28,2;CL:0000223,9.57e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.23e-43;11!UBERON:0009497;3.58e-36;13!UBERON:0006242;2.94e-14;1!UBERON:0003104;3.28e-14;31!UBERON:0001041;4.64e-11;30!CL:0000223;1.20e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p5@NR1H4 | |short_description=p5@NR1H4 | ||
}} | }} |
Latest revision as of 07:25, 25 September 2015
Short description: | p5@NR1H4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NR1H4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 44bp_to_ENST00000546380_5end |
EntrezGene: | NR1H4 |
HGNC: | 7967 |
UniProt: | F8W1M1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.14e-53 | 12 |
hepatic stem cell | 4.13e-28 | 2 |
hepatic mesenchymal stem cell | 4.13e-28 | 2 |
endodermal cell | 9.57e-11 | 58 |