FFCP PHASE1:Mm9::chr11:69778260..69778313,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=53624|HGNC=|MCL_coexpression_id=12|UniProt=Q9Z261|association_with_transcript=0bp_to_ENSMUST00000108597,NM_001193619,uc011xxl.1_5end|description=CAGE_peak_3_at_Cldn7_5end|id=chr11:69778260..69778313,+|ontology_enrichment_celltype=CL:0002563!1.24e-09!9;CL:0002251!1.24e-09!9;CL:0002076!1.30e-08!15;CL:0000066!1.03e-07!25;CL:0000239!2.76e-07!6;CL:0000677!2.76e-07!6;CL:0000212!2.76e-07!6;CL:0000584!2.76e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,2.38e-17,9;CL:0002251,2.38e-17,9;CL:0002076,8.49e-17,15;CL:0000066,4.63e-15,25;CL:0000239,9.03e-13,6;CL:0000677,9.03e-13,6;CL:0000584,9.03e-13,6;CL:0000223,7.05e-12,20;CL:0000075,8.19e-11,7;CL:0000682,1.76e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!9.86e-16!15;UBERON:0000160!1.25e-15!43;UBERON:0001242!9.10e-14!13;UBERON:0000060!9.10e-14!13;UBERON:0001262!9.10e-14!13;UBERON:0004786!9.10e-14!13;UBERON:0005409!3.39e-13!59;UBERON:0004923!3.36e-11!24;UBERON:0004119!2.93e-10!130;UBERON:0000925!2.93e-10!130;UBERON:0006595!2.93e-10!130;UBERON:0003350!1.24e-09!9;UBERON:0004808!1.24e-09!9;UBERON:0001277!1.24e-09!9;UBERON:0001007!1.64e-09!128;UBERON:0001555!1.64e-09!128;UBERON:0007026!1.64e-09!128;UBERON:0004921!1.89e-08!126;UBERON:0004185!1.89e-08!126;UBERON:0000485!2.56e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.35e-42,31;UBERON:0005409,1.69e-29,47;UBERON:0000344,2.53e-29,15;UBERON:0001242,1.84e-25,13;UBERON:0001262,1.84e-25,13;UBERON:0004786,1.84e-25,13;UBERON:0004923,4.28e-19,24;UBERON:0003350,2.38e-17,9;UBERON:0004808,2.38e-17,9;UBERON:0001277,2.38e-17,9;UBERON:0001007,6.33e-14,116;UBERON:0001555,6.33e-14,116;UBERON:0007026,6.33e-14,116;UBERON:0000485,7.75e-14,11;UBERON:0004119,1.54e-13,118;UBERON:0000925,1.54e-13,118;UBERON:0006595,1.54e-13,118;UBERON:0004921,4.91e-12,114;UBERON:0002108,2.72e-09,4;UBERON:0000331,9.41e-08,3;UBERON:0002116,9.41e-08,3;UBERON:0001204,9.41e-08,3;UBERON:0001168,9.41e-08,3|phase1_expression=0,38.0383194326904,56.4199056843025,24.1971369045464,19.5349334679075,15.1091344720701,20.5579123724063,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,21.2789922315231,33.0349364736725,36.1766137392463,48.2453435698164,33.1825698336269,63.0877752595161,49.1458753031865,56.5412802171027,0,0,0,6.06588401477677,6.4831511689812,7.14592746918292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,4.76280290224671,3.80039798212648,4.04419556011827,3.19714863213368,0,0,0,0,0,0,0,0,4.6967043869531,0,0,0,0,0,9.31958806090611,0,0,20.1811073614787,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,1.26361379216837,0.631325567659422,0,0,0,0,0.204109497453984,0.12811372028485,0.187403449119458,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.1293148088659,4.49565963328025,0,0,0.644337306610467,0.80673409849337,2.66853652613844,1.52180500890047,11.8632265386128,3.95277491337626,13.3207660664143,8.55512829776949,10.1381325301942,11.6846523125049,15.561939590978,16.3295844068581,0,0,0,0,0,0.0701358198903186,0.379419222745544,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0.476087281772027,0.390267295715598,0.157635144106191,0.44292937929755,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,1.96705709207614,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.989820737835213,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.23467170806371,0.847328283455281,0.220528398054962,0,0,0,0,0.164140899745061,8.16146342563582,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,1.08005340821801,0,0.436725127492355,0.134864346384821,0.0826534557253359,0,25.4045347651914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0.503653849092235,1.15913756419314,0.93841237725591,8.97442958909599,1.07184189539533,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0.192075457214608,0.287177344778066,0,0.231768651889711,0.38581844092741,0,0,0.342869252385415,0.177475806159338,0.953744759789284,0.290692833264657,0.282328141245992,0.0846146078916765,0.365855945745545,0,0.271608227691724,0,0.474540072496697,0.29551344712669,0.409231043169689,0.619747364743864,0.385813221962283,0,0.233931608445408,0.644613162144895,0,0,0.231867835620421|short_description=p3@Cldn7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=53624 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z261 | |||
|association_with_transcript=0bp_to_ENSMUST00000108597,NM_001193619,uc011xxl.1_5end | |||
|cluster_id=chr11:69778260..69778313,+ | |||
|description=CAGE_peak_3_at_Cldn7_5end | |||
|id=chr11:69778260..69778313,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.24e-09!9;CL:0002251!1.24e-09!9;CL:0002076!1.30e-08!15;CL:0000066!1.03e-07!25;CL:0000239!2.76e-07!6;CL:0000677!2.76e-07!6;CL:0000212!2.76e-07!6;CL:0000584!2.76e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.38e-17,9;CL:0002251,2.38e-17,9;CL:0002076,8.49e-17,15;CL:0000066,4.63e-15,25;CL:0000239,9.03e-13,6;CL:0000677,9.03e-13,6;CL:0000584,9.03e-13,6;CL:0000223,7.05e-12,20;CL:0000075,8.19e-11,7;CL:0000682,1.76e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!9.86e-16!15;UBERON:0000160!1.25e-15!43;UBERON:0001242!9.10e-14!13;UBERON:0000060!9.10e-14!13;UBERON:0001262!9.10e-14!13;UBERON:0004786!9.10e-14!13;UBERON:0005409!3.39e-13!59;UBERON:0004923!3.36e-11!24;UBERON:0004119!2.93e-10!130;UBERON:0000925!2.93e-10!130;UBERON:0006595!2.93e-10!130;UBERON:0003350!1.24e-09!9;UBERON:0004808!1.24e-09!9;UBERON:0001277!1.24e-09!9;UBERON:0001007!1.64e-09!128;UBERON:0001555!1.64e-09!128;UBERON:0007026!1.64e-09!128;UBERON:0004921!1.89e-08!126;UBERON:0004185!1.89e-08!126;UBERON:0000485!2.56e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.35e-42,31;UBERON:0005409,1.69e-29,47;UBERON:0000344,2.53e-29,15;UBERON:0001242,1.84e-25,13;UBERON:0001262,1.84e-25,13;UBERON:0004786,1.84e-25,13;UBERON:0004923,4.28e-19,24;UBERON:0003350,2.38e-17,9;UBERON:0004808,2.38e-17,9;UBERON:0001277,2.38e-17,9;UBERON:0001007,6.33e-14,116;UBERON:0001555,6.33e-14,116;UBERON:0007026,6.33e-14,116;UBERON:0000485,7.75e-14,11;UBERON:0004119,1.54e-13,118;UBERON:0000925,1.54e-13,118;UBERON:0006595,1.54e-13,118;UBERON:0004921,4.91e-12,114;UBERON:0002108,2.72e-09,4;UBERON:0000331,9.41e-08,3;UBERON:0002116,9.41e-08,3;UBERON:0001204,9.41e-08,3;UBERON:0001168,9.41e-08,3 | |||
|phase1_expression=0,38.0383194326904,56.4199056843025,24.1971369045464,19.5349334679075,15.1091344720701,20.5579123724063,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,21.2789922315231,33.0349364736725,36.1766137392463,48.2453435698164,33.1825698336269,63.0877752595161,49.1458753031865,56.5412802171027,0,0,0,6.06588401477677,6.4831511689812,7.14592746918292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,4.76280290224671,3.80039798212648,4.04419556011827,3.19714863213368,0,0,0,0,0,0,0,0,4.6967043869531,0,0,0,0,0,9.31958806090611,0,0,20.1811073614787,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,1.26361379216837,0.631325567659422,0,0,0,0,0.204109497453984,0.12811372028485,0.187403449119458,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.1293148088659,4.49565963328025,0,0,0.644337306610467,0.80673409849337,2.66853652613844,1.52180500890047,11.8632265386128,3.95277491337626,13.3207660664143,8.55512829776949,10.1381325301942,11.6846523125049,15.561939590978,16.3295844068581,0,0,0,0,0,0.0701358198903186,0.379419222745544,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0.476087281772027,0.390267295715598,0.157635144106191,0.44292937929755,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,1.96705709207614,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.989820737835213,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.23467170806371,0.847328283455281,0.220528398054962,0,0,0,0,0.164140899745061,8.16146342563582,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,1.08005340821801,0,0.436725127492355,0.134864346384821,0.0826534557253359,0,25.4045347651914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0.503653849092235,1.15913756419314,0.93841237725591,8.97442958909599,1.07184189539533,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0.192075457214608,0.287177344778066,0,0.231768651889711,0.38581844092741,0,0,0.342869252385415,0.177475806159338,0.953744759789284,0.290692833264657,0.282328141245992,0.0846146078916765,0.365855945745545,0,0.271608227691724,0,0.474540072496697,0.29551344712669,0.409231043169689,0.619747364743864,0.385813221962283,0,0.233931608445408,0.644613162144895,0,0,0.231867835620421 | |||
|short_description=p3@Cldn7 | |||
}} |
Latest revision as of 13:55, 25 September 2015
Short description: | p3@Cldn7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cldn7_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000108597, NM_001193619, uc011xxl.1_5end |
EntrezGene: | Cldn7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.38e-17 | 9 |
epithelial cell of alimentary canal | 2.38e-17 | 9 |
endo-epithelial cell | 8.49e-17 | 15 |
epithelial cell | 4.63e-15 | 25 |
brush border epithelial cell | 9.03e-13 | 6 |
gut absorptive cell | 9.03e-13 | 6 |
enterocyte | 9.03e-13 | 6 |
endodermal cell | 7.05e-12 | 20 |
columnar/cuboidal epithelial cell | 8.19e-11 | 7 |
M cell of gut | 1.76e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.35e-42 | 31 |
gastrointestinal system | 1.69e-29 | 47 |
mucosa | 2.53e-29 | 15 |
intestinal mucosa | 1.84e-25 | 13 |
wall of intestine | 1.84e-25 | 13 |
gastrointestinal system mucosa | 1.84e-25 | 13 |
organ component layer | 4.28e-19 | 24 |
epithelium of mucosa | 2.38e-17 | 9 |
gastrointestinal system epithelium | 2.38e-17 | 9 |
intestinal epithelium | 2.38e-17 | 9 |
digestive system | 6.33e-14 | 116 |
digestive tract | 6.33e-14 | 116 |
primitive gut | 6.33e-14 | 116 |
simple columnar epithelium | 7.75e-14 | 11 |
endoderm-derived structure | 1.54e-13 | 118 |
endoderm | 1.54e-13 | 118 |
presumptive endoderm | 1.54e-13 | 118 |
subdivision of digestive tract | 4.91e-12 | 114 |
small intestine | 2.72e-09 | 4 |
ileal mucosa | 9.41e-08 | 3 |
ileum | 9.41e-08 | 3 |
mucosa of small intestine | 9.41e-08 | 3 |
wall of small intestine | 9.41e-08 | 3 |