FFCP PHASE1:Mm9::chr7:113584594..113584612,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=209380 | |EntrezGene=209380 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=698 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BRX7 | |UniProt=Q8BRX7 | ||
|association_with_transcript=-7bp_to_ENSMUST00000066023,NR_003967,uc009izr.1_5end | |association_with_transcript=-7bp_to_ENSMUST00000066023,NR_003967,uc009izr.1_5end | ||
|cluster_id=chr7:113584594..113584612,- | |||
|description=CAGE_peak_1_at_Gm4759_5end | |description=CAGE_peak_1_at_Gm4759_5end | ||
|id=chr7:113584594..113584612,- | |id=chr7:113584594..113584612,- | ||
|ontology_enrichment_celltype=CL:0000838!3.04e-12!12;CL:0000084!2.87e-11!11;CL:0000827!2.87e-11!11;CL:0000542!6.14e-11!13;CL:0000051!6.14e-11!13;CL:0002031!1.13e-10!25;CL:0000988!8.17e-10!32;CL:0002032!8.17e-10!32;CL:0000037!8.17e-10!32;CL:0000566!8.17e-10!32;CL:0000837!8.17e-10!32;CL:0000791!1.19e-09!9;CL:0000789!1.19e-09!9;CL:0002420!1.19e-09!9;CL:0002419!1.19e-09!9;CL:0000790!1.19e-09!9;CL:0000624!1.21e-08!8;CL:0000738!1.24e-08!17;CL:0002087!1.24e-08!17 | |ontology_enrichment_celltype=CL:0000838!3.04e-12!12;CL:0000084!2.87e-11!11;CL:0000827!2.87e-11!11;CL:0000542!6.14e-11!13;CL:0000051!6.14e-11!13;CL:0002031!1.13e-10!25;CL:0000988!8.17e-10!32;CL:0002032!8.17e-10!32;CL:0000037!8.17e-10!32;CL:0000566!8.17e-10!32;CL:0000837!8.17e-10!32;CL:0000791!1.19e-09!9;CL:0000789!1.19e-09!9;CL:0002420!1.19e-09!9;CL:0002419!1.19e-09!9;CL:0000790!1.19e-09!9;CL:0000624!1.21e-08!8;CL:0000738!1.24e-08!17;CL:0002087!1.24e-08!17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.10e-21,12;CL:0002031,5.88e-21,25;CL:0000084,2.51e-19,11;CL:0000827,2.51e-19,11;CL:0000542,3.04e-19,13;CL:0000051,3.04e-19,13;CL:0000988,7.00e-19,32;CL:0002032,7.00e-19,32;CL:0000037,7.00e-19,32;CL:0000837,7.00e-19,32;CL:0000791,2.31e-16,9;CL:0000789,2.31e-16,9;CL:0002420,2.31e-16,9;CL:0002419,2.31e-16,9;CL:0000790,2.31e-16,9;CL:0000738,3.86e-16,17;CL:0002087,3.86e-16,17;CL:0000624,1.60e-14,8;CL:0002320,1.83e-11,46;CL:0000134,1.83e-11,46;CL:0000893,5.08e-11,6;CL:0002489,5.08e-11,6;CL:0000898,5.08e-11,6;CL:0000809,5.08e-11,6;CL:0000810,5.08e-11,6;CL:0000895,5.08e-11,6;CL:0000808,5.08e-11,6;CL:0000894,5.08e-11,6;CL:0000806,5.08e-11,6;CL:0000807,5.08e-11,6;CL:0000805,5.08e-11,6;CL:0002425,5.08e-11,6;CL:0002436,5.08e-11,6;CL:0002427,5.08e-11,6;CL:0002428,5.08e-11,6;CL:0002429,5.08e-11,6;CL:0002433,5.08e-11,6;CL:0002431,5.08e-11,6;CL:0002432,5.08e-11,6;CL:0000219,5.45e-09,54;CL:0000553,1.92e-08,6;CL:0000556,1.92e-08,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.59e-15!48;UBERON:0004177!4.86e-14!29;UBERON:0002390!2.15e-13!45;UBERON:0003061!2.15e-13!45;UBERON:0002405!2.68e-12!70;UBERON:0003408!5.57e-12!24;UBERON:0006562!1.40e-11!24;UBERON:0001557!1.40e-11!24;UBERON:0001042!1.40e-11!24;UBERON:0008814!1.40e-11!24;UBERON:0009145!1.40e-11!24;UBERON:0002370!2.96e-11!23;UBERON:0000974!2.96e-11!23;UBERON:0004807!2.96e-11!23;UBERON:0005058!2.96e-11!23;UBERON:0003351!2.96e-11!23;UBERON:0009113!2.96e-11!23;UBERON:0003295!2.96e-11!23;UBERON:0009722!2.96e-11!23;UBERON:0005562!2.96e-11!23;UBERON:0007690!2.96e-11!23;UBERON:0001004!5.38e-10!42;UBERON:0005057!8.76e-10!51;UBERON:0000072!1.63e-09!27;UBERON:0000065!2.19e-09!41;UBERON:0003081!5.69e-09!88;UBERON:0003104!1.53e-07!131;UBERON:0009142!1.53e-07!131;UBERON:0000063!2.49e-07!35;UBERON:0000077!3.23e-07!97;UBERON:0001041!6.71e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.55e-19,48;UBERON:0002405,5.55e-19,48;UBERON:0002390,1.17e-18,45;UBERON:0003061,1.17e-18,45;UBERON:0004177,4.03e-17,29;UBERON:0005057,4.03e-17,29;UBERON:0003408,1.04e-14,24;UBERON:0002370,1.67e-13,23;UBERON:0000974,1.67e-13,23;UBERON:0004807,1.67e-13,23;UBERON:0005058,1.67e-13,23;UBERON:0003351,1.67e-13,23;UBERON:0009113,1.67e-13,23;UBERON:0003295,1.67e-13,23;UBERON:0009722,1.67e-13,23;UBERON:0005562,1.67e-13,23;UBERON:0007690,1.67e-13,23;UBERON:0000077,2.48e-13,35;UBERON:0006562,8.77e-13,24;UBERON:0001557,8.77e-13,24;UBERON:0001042,8.77e-13,24;UBERON:0008814,8.77e-13,24;UBERON:0009145,8.77e-13,24;UBERON:0002384,1.83e-11,46;UBERON:0000072,5.96e-11,27;UBERON:0001004,3.27e-10,42;UBERON:0003081,5.29e-10,87;UBERON:0000065,2.55e-09,41;UBERON:0007811,1.72e-08,36 | |||
|phase1_expression=0,0,0,0,0,0,0,11.3628524628587,7.03943610758334,2.80877431586392,3.25314139628459,1.43589886191606,43.9985875923199,17.6589212886375,3.33109761815663,7.69406016081339,0,26.498821890092,29.3424887916281,16.1268067683251,0.255129870453209,3.3758923408301,2.61199789138935,0.639969691173627,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0,0.101376931219515,0,0,0,0,0,0,0,15.939347575485,21.7608642603403,24.1987535382574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.25602267690966,74.5741104903855,1.03909497345377,0,0,0,0,0,0,0,0.578397427679647,0.884610551949874,0.808834249737046,1.54589062922275,2.90925151881133,0,0,0,1.27728527604296,2.27648736561249,0,1.01656181658452,0,0,0,0,0,0,0,0,2.86136032403214,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.324275238183423,0.146199987425332,0,0.134206418760372,0,0,1.65209391491899,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.590440591918409,0.470996183524124,0.246794327843601,0.296452627087149,0,0,0,0.202860121388503,0.964708639009667,0.25462585178142,0.863088412352432,0.648540907100142,0,0,0,0,0.252578877947112,0,0.482443521363367,3.51031061316549,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.637819074629948,1.80249646187312,2.41758974612254,0.578596234326046,0,1.08781136763742,0,1.37968373152366,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,1.26414703174326,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0.220528398054962,0.65954501176592,0,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,5.29699730473343,0,0.555583582109135,1.50694765603753,2.1871076435364,6.40578884978263,14.4481665494777,13.5752908753948,11.746997773376,0,0,0,0,0,0,0,0,0,0.129614973291793,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0.288030006257865,1.26404448251271,0,0.513554785824136,0.649604114888975,0.716106782669926,1.39076948346885,1.44234539423963,1.18151621739662,1.61546319917036,0.914481679859998,1.00826185136841,2.82627854145282,4.04089734889384,5.37633750035217,0.226730383615211,0,0,0,0.19318959403219,0,1.28206136987086,0,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0.441182838239031,1.15933917810211 | |phase1_expression=0,0,0,0,0,0,0,11.3628524628587,7.03943610758334,2.80877431586392,3.25314139628459,1.43589886191606,43.9985875923199,17.6589212886375,3.33109761815663,7.69406016081339,0,26.498821890092,29.3424887916281,16.1268067683251,0.255129870453209,3.3758923408301,2.61199789138935,0.639969691173627,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0,0.101376931219515,0,0,0,0,0,0,0,15.939347575485,21.7608642603403,24.1987535382574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.25602267690966,74.5741104903855,1.03909497345377,0,0,0,0,0,0,0,0.578397427679647,0.884610551949874,0.808834249737046,1.54589062922275,2.90925151881133,0,0,0,1.27728527604296,2.27648736561249,0,1.01656181658452,0,0,0,0,0,0,0,0,2.86136032403214,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.324275238183423,0.146199987425332,0,0.134206418760372,0,0,1.65209391491899,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.590440591918409,0.470996183524124,0.246794327843601,0.296452627087149,0,0,0,0.202860121388503,0.964708639009667,0.25462585178142,0.863088412352432,0.648540907100142,0,0,0,0,0.252578877947112,0,0.482443521363367,3.51031061316549,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.637819074629948,1.80249646187312,2.41758974612254,0.578596234326046,0,1.08781136763742,0,1.37968373152366,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,1.26414703174326,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0.220528398054962,0.65954501176592,0,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,5.29699730473343,0,0.555583582109135,1.50694765603753,2.1871076435364,6.40578884978263,14.4481665494777,13.5752908753948,11.746997773376,0,0,0,0,0,0,0,0,0,0.129614973291793,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0.288030006257865,1.26404448251271,0,0.513554785824136,0.649604114888975,0.716106782669926,1.39076948346885,1.44234539423963,1.18151621739662,1.61546319917036,0.914481679859998,1.00826185136841,2.82627854145282,4.04089734889384,5.37633750035217,0.226730383615211,0,0,0,0.19318959403219,0,1.28206136987086,0,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0.441182838239031,1.15933917810211 | ||
|short_description=p1@Gm4759 | |short_description=p1@Gm4759 | ||
}} | }} |
Latest revision as of 16:45, 25 September 2015
Short description: | p1@Gm4759 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm4759_5end |
Coexpression cluster: | MCL_coexpression_mm9:698 |
Association with transcript: | -7bp_to_ENSMUST00000066023, NR_003967, uc009izr.1_5end |
EntrezGene: | Gm4759 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.55e-19 | 48 |
immune system | 5.55e-19 | 48 |
hematopoietic system | 1.17e-18 | 45 |
blood island | 1.17e-18 | 45 |
hemopoietic organ | 4.03e-17 | 29 |
immune organ | 4.03e-17 | 29 |
gland of gut | 1.04e-14 | 24 |
thymus | 1.67e-13 | 23 |
neck | 1.67e-13 | 23 |
respiratory system epithelium | 1.67e-13 | 23 |
hemolymphoid system gland | 1.67e-13 | 23 |
pharyngeal epithelium | 1.67e-13 | 23 |
thymic region | 1.67e-13 | 23 |
pharyngeal gland | 1.67e-13 | 23 |
entire pharyngeal arch endoderm | 1.67e-13 | 23 |
thymus primordium | 1.67e-13 | 23 |
early pharyngeal endoderm | 1.67e-13 | 23 |
mixed endoderm/mesoderm-derived structure | 2.48e-13 | 35 |
pharynx | 8.77e-13 | 24 |
upper respiratory tract | 8.77e-13 | 24 |
chordate pharynx | 8.77e-13 | 24 |
pharyngeal arch system | 8.77e-13 | 24 |
pharyngeal region of foregut | 8.77e-13 | 24 |
connective tissue | 1.83e-11 | 46 |
segment of respiratory tract | 5.96e-11 | 27 |
respiratory system | 3.27e-10 | 42 |
lateral plate mesoderm | 5.29e-10 | 87 |
respiratory tract | 2.55e-09 | 41 |
craniocervical region | 1.72e-08 | 36 |