FFCP PHASE1:Mm9::chr11:83223222..83223229,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:83223222..83223229,+ to FFCP PHASE1:Mm9::chr11:83223222..83223229,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=276952 | |EntrezGene=276952 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=251 | |||
|TSSclassifier=NA | |||
|UniProt=Q5SSG5 | |UniProt=Q5SSG5 | ||
|association_with_transcript=32bp_to_ENSMUST00000108140,uc007kow.1_5end | |||
|cluster_id=chr11:83223222..83223229,+ | |||
|description=CAGE_peak_3_at_Rasl10b_5end | |||
|id=chr11:83223222..83223229,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.76e-12!23;CL:0000337!4.76e-12!23;CL:0000540!6.12e-09!33;CL:0000047!6.12e-09!33;CL:0000031!6.12e-09!33;CL:0000404!6.12e-09!33;CL:0000221!2.99e-07!44;CL:0000133!2.99e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.37e-17,23;CL:0000337,9.37e-17,23;CL:0000540,9.47e-11,33;CL:0000047,9.47e-11,33;CL:0000031,9.47e-11,33;CL:0000404,9.47e-11,33;CL:0000393,1.22e-08,39;CL:0000211,1.22e-08,39;CL:0000221,1.56e-08,44;CL:0000133,1.56e-08,44;CL:0002614,3.55e-08,3;CL:0002612,1.12e-07,3;CL:0002319,1.45e-07,43;CL:0002610,2.61e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.69e-36!63;UBERON:0002346!1.65e-33!71;UBERON:0003075!1.65e-33!71;UBERON:0007284!1.65e-33!71;UBERON:0001049!9.93e-30!52;UBERON:0005068!9.93e-30!52;UBERON:0006241!9.93e-30!52;UBERON:0007135!9.93e-30!52;UBERON:0004121!1.77e-29!102;UBERON:0000924!1.77e-29!102;UBERON:0006601!1.77e-29!102;UBERON:0003056!1.93e-29!49;UBERON:0001017!8.69e-29!73;UBERON:0005743!8.69e-29!73;UBERON:0000955!3.85e-28!50;UBERON:0006238!3.85e-28!50;UBERON:0000073!1.84e-27!75;UBERON:0001016!1.84e-27!75;UBERON:0002616!4.76e-27!49;UBERON:0003080!5.24e-23!40;UBERON:0002780!3.80e-22!39;UBERON:0001890!3.80e-22!39;UBERON:0006240!3.80e-22!39;UBERON:0002020!4.94e-22!34;UBERON:0007811!6.02e-21!86;UBERON:0000153!3.48e-19!94;UBERON:0002791!1.16e-17!29;UBERON:0003528!1.16e-17!29;UBERON:0001893!1.16e-17!29;UBERON:0002619!4.67e-11!17;UBERON:0000956!9.50e-11!21;UBERON:0001869!9.50e-11!21;UBERON:0000203!9.50e-11!21;UBERON:0002021!6.22e-10!10;UBERON:0000411!6.22e-10!10;UBERON:0001950!6.22e-10!10;UBERON:0004111!1.52e-09!122;UBERON:0000025!2.12e-09!114;UBERON:0000020!8.00e-09!12;UBERON:0001032!8.00e-09!12;UBERON:0004456!8.00e-09!12;UBERON:0002420!1.47e-08!8;UBERON:0007245!1.47e-08!8;UBERON:0010009!1.47e-08!8;UBERON:0010011!1.47e-08!8;UBERON:0000454!1.47e-08!8;UBERON:0003076!3.93e-07!12;UBERON:0003057!3.93e-07!12;UBERON:0000970!4.45e-07!9;UBERON:0000019!4.45e-07!9;UBERON:0000047!4.45e-07!9;UBERON:0004088!4.45e-07!9;UBERON:0002104!4.45e-07!9;UBERON:0001456!4.45e-07!9;UBERON:0003072!4.45e-07!9;UBERON:0003071!4.45e-07!9;UBERON:0004128!4.45e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.57e-37,54;UBERON:0001049,3.76e-31,52;UBERON:0005068,3.76e-31,52;UBERON:0006241,3.76e-31,52;UBERON:0007135,3.76e-31,52;UBERON:0002346,1.77e-30,64;UBERON:0003075,1.77e-30,64;UBERON:0007284,1.77e-30,64;UBERON:0002020,2.64e-30,34;UBERON:0001017,7.03e-30,73;UBERON:0001016,6.75e-29,75;UBERON:0004121,3.15e-28,95;UBERON:0000924,3.15e-28,95;UBERON:0006601,3.15e-28,95;UBERON:0010371,8.19e-28,73;UBERON:0000955,2.62e-25,47;UBERON:0006238,2.62e-25,47;UBERON:0002616,2.05e-23,46;UBERON:0003056,7.45e-22,49;UBERON:0003528,3.21e-21,29;UBERON:0002791,3.21e-21,29;UBERON:0001893,3.21e-21,29;UBERON:0003080,1.04e-20,40;UBERON:0010314,1.21e-20,92;UBERON:0002780,3.55e-19,39;UBERON:0001890,3.55e-19,39;UBERON:0006240,3.55e-19,39;UBERON:0002420,1.39e-14,8;UBERON:0007245,1.39e-14,8;UBERON:0010009,1.39e-14,8;UBERON:0010011,1.39e-14,8;UBERON:0000454,1.39e-14,8;UBERON:0002021,1.45e-14,10;UBERON:0000411,1.45e-14,10;UBERON:0001950,1.45e-14,10;UBERON:0001948,1.48e-11,5;UBERON:0002315,1.48e-11,5;UBERON:0003076,5.15e-11,12;UBERON:0003057,5.15e-11,12;UBERON:0000025,9.54e-11,114;UBERON:0004111,1.41e-10,122;UBERON:0002619,2.86e-10,17;UBERON:0002950,4.38e-10,4;UBERON:0001891,4.38e-10,4;UBERON:0009616,4.38e-10,4;UBERON:0010286,4.38e-10,4;UBERON:0000956,4.51e-10,21;UBERON:0001869,4.51e-10,21;UBERON:0000203,4.51e-10,21;UBERON:0002240,1.41e-09,6;UBERON:0005174,1.41e-09,6;UBERON:0001137,1.41e-09,6;UBERON:0000369,3.39e-08,5;UBERON:0002435,3.39e-08,5;UBERON:0000204,3.39e-08,5;UBERON:0010082,3.39e-08,5;UBERON:0002038,3.55e-08,3;UBERON:0009663,3.55e-08,3;UBERON:0009661,3.55e-08,3;UBERON:0000125,3.55e-08,3;UBERON:0002308,3.55e-08,3;UBERON:0002257,1.12e-07,3;UBERON:0000483,1.26e-07,174;UBERON:0011216,1.56e-07,194;UBERON:0000119,1.85e-07,176;UBERON:0004684,2.61e-07,3;UBERON:0002275,2.61e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0,0,0,0,0,0,0,0.768436610643109,0,0.405017814995072,0,1.42825492201902,1.10434270475807,0.61245399607477,0.670918297127655,0,1.10115880999389,2.042997409363,1.0752457327937,1.45074916503213,0.914876436024097,1.04182674111352,1.3959149950069,2.25105044012672,2.44477196442896,1.17851434189467,1.42371680799103,1.67759501242771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.461230994512117,0.150722640552623,0,0,0,0,0,0,0,0,0,0.585561594023094,1.04723353406728,0,0,0,0,1.3481157546434,6.40500843946077,2.38743269014442,4.86708096538374,4.09144731728529,3.74018480207208,5.353961681236,0,0,0,0.420883711772948,0.260240885925407,0.229902104433473,0.900310649026746,0.60281927134286,1.36072998302656,1.15302348256365,2.24884138943349,0.776110112217047,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0.493679549740441,0,0.162137619091711,0,0.219550115291051,0.402619256281115,2.52347938276953,0.823236899034275,0,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,1.40654023910644,0.163934945376675,0,0,0,0.430846795465598,0,0.222798674082394,0,0,0,0,6.10510501201433,0,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0.428674070063185,0.532020700926821,0.178368817602071,0,0.608929898229199,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,2.25900737046827,2.76195141904306,2.29158205375759,1.71853182343688,1.37016503954128,2.2661816921691,1.35004500046361,0.900642406448441,0.906284817968409,1.03552062350364,0.103787347584177,0,0.341467211508268,0,0.209613162627982,0,0.44449345560323,0,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0,0.320125762024346,0.114870937911227,0,0,0.38581844092741,0.412085900803307,0.147198920134397,0,0,0,0.145346416632329,0.282328141245992,0.25384382367503,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0,0,0,0,0,0,0,0.768436610643109,0,0.405017814995072,0,1.42825492201902,1.10434270475807,0.61245399607477,0.670918297127655,0,1.10115880999389,2.042997409363,1.0752457327937,1.45074916503213,0.914876436024097,1.04182674111352,1.3959149950069,2.25105044012672,2.44477196442896,1.17851434189467,1.42371680799103,1.67759501242771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.461230994512117,0.150722640552623,0,0,0,0,0,0,0,0,0,0.585561594023094,1.04723353406728,0,0,0,0,1.3481157546434,6.40500843946077,2.38743269014442,4.86708096538374,4.09144731728529,3.74018480207208,5.353961681236,0,0,0,0.420883711772948,0.260240885925407,0.229902104433473,0.900310649026746,0.60281927134286,1.36072998302656,1.15302348256365,2.24884138943349,0.776110112217047,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0.493679549740441,0,0.162137619091711,0,0.219550115291051,0.402619256281115,2.52347938276953,0.823236899034275,0,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,1.40654023910644,0.163934945376675,0,0,0,0.430846795465598,0,0.222798674082394,0,0,0,0,6.10510501201433,0,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0.428674070063185,0.532020700926821,0.178368817602071,0,0.608929898229199,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,2.25900737046827,2.76195141904306,2.29158205375759,1.71853182343688,1.37016503954128,2.2661816921691,1.35004500046361,0.900642406448441,0.906284817968409,1.03552062350364,0.103787347584177,0,0.341467211508268,0,0.209613162627982,0,0.44449345560323,0,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0,0.320125762024346,0.114870937911227,0,0,0.38581844092741,0.412085900803307,0.147198920134397,0,0,0,0.145346416632329,0.282328141245992,0.25384382367503,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0,0,0 | ||
|short_description=p3@Rasl10b | |||
}} | }} |
Latest revision as of 20:05, 25 September 2015
Short description: | p3@Rasl10b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rasl10b_5end |
Coexpression cluster: | MCL_coexpression_mm9:251 |
Association with transcript: | 32bp_to_ENSMUST00000108140, uc007kow.1_5end |
EntrezGene: | Rasl10b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.37e-17 | 23 |
neuroblast (sensu Vertebrata) | 9.37e-17 | 23 |
neuron | 9.47e-11 | 33 |
neuronal stem cell | 9.47e-11 | 33 |
neuroblast | 9.47e-11 | 33 |
electrically signaling cell | 9.47e-11 | 33 |
electrically responsive cell | 1.22e-08 | 39 |
electrically active cell | 1.22e-08 | 39 |
ectodermal cell | 1.56e-08 | 44 |
neurectodermal cell | 1.56e-08 | 44 |
neuron of the substantia nigra | 3.55e-08 | 3 |
neuron of the ventral spinal cord | 1.12e-07 | 3 |
neural cell | 1.45e-07 | 43 |
raphe nuclei neuron | 2.61e-07 | 3 |