FFCP PHASE1:Mm9::chr16:90831460..90831469,+: Difference between revisions
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{{FFCP|EntrezGene=70967|HGNC=|MCL_coexpression_id=56|UniProt=P58659|association_with_transcript=102bp_to_ENSMUST00000037539,ENSMUST00000099543_5end|description=CAGE_peak_5_at_4931408A02Rik_5end|id=chr16:90831460..90831469,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000708,1.56e-12,2;CL:0000151,1.20e-08,3;CL:0000499,1.20e-08,3;CL:0000327,1.20e-08,3;CL:0000192,1.84e-08,3;CL:0000359,1.84e-08,3;CL:0002539,1.84e-08,3;CL:0000514,1.84e-08,3;CL:0000068,3.05e-08,3;CL:0002202,3.05e-08,3;CL:0000069,3.05e-08,3;CL:0002632,3.05e-08,3;CL:0002368,3.05e-08,3;CL:0000307,3.05e-08,3;CL:0000377,3.05e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004175!2.57e-07!9;UBERON:0004121!6.04e-07!102;UBERON:0000924!6.04e-07!102;UBERON:0006601!6.04e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0005795,3.55e-13,4;UBERON:0000995,3.55e-13,4;UBERON:0003210,1.56e-12,2;UBERON:0001987,4.96e-12,2;UBERON:0003124,4.96e-12,2;UBERON:0004340,4.96e-12,2;UBERON:0003975,1.19e-10,5;UBERON:0004175,5.37e-10,9;UBERON:0001135,1.84e-08,3;UBERON:0004237,1.84e-08,3;UBERON:0004695,1.84e-08,3;UBERON:0002111,1.84e-08,3;UBERON:0004178,1.84e-08,3;UBERON:0005631,2.58e-08,3;UBERON:0000478,2.58e-08,3;UBERON:0000158,2.58e-08,3;UBERON:0003126,3.05e-08,3;UBERON:0001005,3.05e-08,3;UBERON:0007196,3.05e-08,3;UBERON:0001558,3.05e-08,3;UBERON:0006834,5.34e-07,1;UBERON:0003134,7.68e-07,8|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,2.23029248682932,0.550640256485045,5.47673941043627,0.436050312760893,0.439372365468944,0.388859798148567,2.93971485413261,0,0,0,0,0.514518872071894,0,0,0,0,0,1.69422266034566,4.4464739805557,0,0,0.7104801149461,0,0.768436610643109,0.311068836925433,0,0,0,0,0,0.287536413054709,0,0,0,0,0,0.0914876436024097,0.52091337055676,0,0.56276261003168,0.15279824777681,0,0.284743361598206,0,0.227178579999552,0.226714680320357,0.579728977403356,0,0,0,0,0,0,0.852151612890289,0,1.06001872353102,0,1.28326477414318,0,0,0.649473123033642,1.26679932737549,1.51657333504435,0.34255163915718,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0.494389935468748,0.144599356919912,0,0,0,0.484875253135222,0,0.585561594023094,0,0,0,0,0,0,0,0.125654352112864,0,0.511430914660661,0,0,0.101839363850316,0.124406970610093,0.505445516867349,0.210441855886474,0,0,0,0.30140963567143,0.0680364991513279,0,0.187403449119458,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0.134206418760372,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.390267295715598,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0.321101179975584,0.117211686592203,0,0,0.315508219416257,0,0.215423397732799,0.716906393857656,0.445597348164788,0,0.404810701674894,0,0,0.321321316421807,0,0,0.162886959353576,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0.658196082408484,0,3.98941903708308,1.0591603543191,0.441056796109924,0.32977250588296,0,0,0.358117032009409,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,1.12738587736838,0,0,0.194451188344048,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0,0.167884616364078,0.386379188064381,1.87682475451182,0.183151624267265,0.214368379079066,1.00314420807073,0,0,0,0,0,0.755393897389701,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0.760437899670719,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.237270036248348,0,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0.231867835620421|short_description=p5@4931408A02Rik}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70967 | |||
|HGNC= | |||
|MCL_coexpression_id=56 | |||
|TSSclassifier=NA | |||
|UniProt=P58659 | |||
|association_with_transcript=102bp_to_ENSMUST00000037539,ENSMUST00000099543_5end | |||
|cluster_id=chr16:90831460..90831469,+ | |||
|description=CAGE_peak_5_at_4931408A02Rik_5end | |||
|id=chr16:90831460..90831469,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,1.56e-12,2;CL:0000151,1.20e-08,3;CL:0000499,1.20e-08,3;CL:0000327,1.20e-08,3;CL:0000192,1.84e-08,3;CL:0000359,1.84e-08,3;CL:0002539,1.84e-08,3;CL:0000514,1.84e-08,3;CL:0000068,3.05e-08,3;CL:0002202,3.05e-08,3;CL:0000069,3.05e-08,3;CL:0002632,3.05e-08,3;CL:0002368,3.05e-08,3;CL:0000307,3.05e-08,3;CL:0000377,3.05e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004175!2.57e-07!9;UBERON:0004121!6.04e-07!102;UBERON:0000924!6.04e-07!102;UBERON:0006601!6.04e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005795,3.55e-13,4;UBERON:0000995,3.55e-13,4;UBERON:0003210,1.56e-12,2;UBERON:0001987,4.96e-12,2;UBERON:0003124,4.96e-12,2;UBERON:0004340,4.96e-12,2;UBERON:0003975,1.19e-10,5;UBERON:0004175,5.37e-10,9;UBERON:0001135,1.84e-08,3;UBERON:0004237,1.84e-08,3;UBERON:0004695,1.84e-08,3;UBERON:0002111,1.84e-08,3;UBERON:0004178,1.84e-08,3;UBERON:0005631,2.58e-08,3;UBERON:0000478,2.58e-08,3;UBERON:0000158,2.58e-08,3;UBERON:0003126,3.05e-08,3;UBERON:0001005,3.05e-08,3;UBERON:0007196,3.05e-08,3;UBERON:0001558,3.05e-08,3;UBERON:0006834,5.34e-07,1;UBERON:0003134,7.68e-07,8 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,2.23029248682932,0.550640256485045,5.47673941043627,0.436050312760893,0.439372365468944,0.388859798148567,2.93971485413261,0,0,0,0,0.514518872071894,0,0,0,0,0,1.69422266034566,4.4464739805557,0,0,0.7104801149461,0,0.768436610643109,0.311068836925433,0,0,0,0,0,0.287536413054709,0,0,0,0,0,0.0914876436024097,0.52091337055676,0,0.56276261003168,0.15279824777681,0,0.284743361598206,0,0.227178579999552,0.226714680320357,0.579728977403356,0,0,0,0,0,0,0.852151612890289,0,1.06001872353102,0,1.28326477414318,0,0,0.649473123033642,1.26679932737549,1.51657333504435,0.34255163915718,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0.494389935468748,0.144599356919912,0,0,0,0.484875253135222,0,0.585561594023094,0,0,0,0,0,0,0,0.125654352112864,0,0.511430914660661,0,0,0.101839363850316,0.124406970610093,0.505445516867349,0.210441855886474,0,0,0,0.30140963567143,0.0680364991513279,0,0.187403449119458,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0.134206418760372,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.390267295715598,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0.321101179975584,0.117211686592203,0,0,0.315508219416257,0,0.215423397732799,0.716906393857656,0.445597348164788,0,0.404810701674894,0,0,0.321321316421807,0,0,0.162886959353576,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0.658196082408484,0,3.98941903708308,1.0591603543191,0.441056796109924,0.32977250588296,0,0,0.358117032009409,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,1.12738587736838,0,0,0.194451188344048,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0,0.167884616364078,0.386379188064381,1.87682475451182,0.183151624267265,0.214368379079066,1.00314420807073,0,0,0,0,0,0.755393897389701,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0.760437899670719,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.237270036248348,0,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p5@4931408A02Rik | |||
}} |
Latest revision as of 20:06, 25 September 2015
Short description: | p5@4931408A02Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_4931408A02Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | 102bp_to_ENSMUST00000037539, ENSMUST00000099543_5end |
EntrezGene: | 4931408A02Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 1.56e-12 | 2 |
secretory cell | 1.20e-08 | 3 |
stromal cell | 1.20e-08 | 3 |
extracellular matrix secreting cell | 1.20e-08 | 3 |
smooth muscle cell | 1.84e-08 | 3 |
vascular associated smooth muscle cell | 1.84e-08 | 3 |
aortic smooth muscle cell | 1.84e-08 | 3 |
smooth muscle myoblast | 1.84e-08 | 3 |
duct epithelial cell | 3.05e-08 | 3 |
epithelial cell of tracheobronchial tree | 3.05e-08 | 3 |
branched duct epithelial cell | 3.05e-08 | 3 |
epithelial cell of lower respiratory tract | 3.05e-08 | 3 |
respiratory epithelial cell | 3.05e-08 | 3 |
tracheal epithelial cell | 3.05e-08 | 3 |
tracheoblast | 3.05e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
embryonic uterus | 3.55e-13 | 4 |
uterus | 3.55e-13 | 4 |
blood-cerebrospinal fluid barrier | 1.56e-12 | 2 |
placenta | 4.96e-12 | 2 |
chorion | 4.96e-12 | 2 |
allantois | 4.96e-12 | 2 |
internal female genitalia | 1.19e-10 | 5 |
internal genitalia | 5.37e-10 | 9 |
smooth muscle tissue | 1.84e-08 | 3 |
blood vessel smooth muscle | 1.84e-08 | 3 |
arterial system smooth muscle | 1.84e-08 | 3 |
artery smooth muscle tissue | 1.84e-08 | 3 |
aorta smooth muscle tissue | 1.84e-08 | 3 |
extraembryonic membrane | 2.58e-08 | 3 |
extraembryonic structure | 2.58e-08 | 3 |
membranous layer | 2.58e-08 | 3 |
trachea | 3.05e-08 | 3 |
respiratory airway | 3.05e-08 | 3 |
tracheobronchial tree | 3.05e-08 | 3 |
lower respiratory tract | 3.05e-08 | 3 |
uterus or analog | 5.34e-07 | 1 |
female reproductive organ | 7.68e-07 | 8 |