FFCP PHASE1:Mm9::chr10:28388194..28388210,+: Difference between revisions
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{{FFCP|EntrezGene=210757|HGNC=|MCL_coexpression_id=4|UniProt=Q8BGW0|association_with_transcript=0bp_to_ENSMUST00000105516,ENSMUST00000162343,NM_178666,uc007eso.1,uc007esp.1,uc007esq.1_5end|description=CAGE_peak_1_at_Themis_5end|id=chr10:28388194..28388210,+|ontology_enrichment_celltype=CL:0000791!1.17e-08!9;CL:0000789!1.17e-08!9;CL:0002420!1.17e-08!9;CL:0002419!1.17e-08!9;CL:0000790!1.17e-08!9;CL:0000624!7.95e-08!8|ontology_enrichment_celltype_v019_2=CL:0000791,7.05e-13,9;CL:0000789,7.05e-13,9;CL:0002420,7.05e-13,9;CL:0002419,7.05e-13,9;CL:0000790,7.05e-13,9;CL:0000624,1.48e-11,8;CL:0000084,4.14e-10,11;CL:0000827,4.14e-10,11;CL:0000838,4.47e-09,12;CL:0000893,5.40e-09,6;CL:0002489,5.40e-09,6;CL:0000898,5.40e-09,6;CL:0000809,5.40e-09,6;CL:0000810,5.40e-09,6;CL:0000895,5.40e-09,6;CL:0000808,5.40e-09,6;CL:0000894,5.40e-09,6;CL:0000806,5.40e-09,6;CL:0000807,5.40e-09,6;CL:0000805,5.40e-09,6;CL:0002425,5.40e-09,6;CL:0002436,5.40e-09,6;CL:0002427,5.40e-09,6;CL:0002428,5.40e-09,6;CL:0002429,5.40e-09,6;CL:0002433,5.40e-09,6;CL:0002431,5.40e-09,6;CL:0002432,5.40e-09,6;CL:0002031,3.29e-08,25;CL:0000542,3.33e-08,13;CL:0000051,3.33e-08,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.57e-16!29;UBERON:0003408!2.12e-15!24;UBERON:0002370!4.02e-15!23;UBERON:0000974!4.02e-15!23;UBERON:0004807!4.02e-15!23;UBERON:0005058!4.02e-15!23;UBERON:0003351!4.02e-15!23;UBERON:0009113!4.02e-15!23;UBERON:0003295!4.02e-15!23;UBERON:0009722!4.02e-15!23;UBERON:0005562!4.02e-15!23;UBERON:0007690!4.02e-15!23;UBERON:0006562!4.17e-14!24;UBERON:0001557!4.17e-14!24;UBERON:0001042!4.17e-14!24;UBERON:0008814!4.17e-14!24;UBERON:0009145!4.17e-14!24;UBERON:0001004!6.41e-14!42;UBERON:0000065!1.40e-13!41;UBERON:0002193!4.44e-13!48;UBERON:0002390!8.77e-13!45;UBERON:0003061!8.77e-13!45;UBERON:0000072!1.75e-12!27;UBERON:0000063!5.50e-10!35;UBERON:0005057!1.97e-07!51;UBERON:0002405!3.02e-07!70;UBERON:0003081!5.36e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.04e-24,23;UBERON:0000974,2.04e-24,23;UBERON:0004807,2.04e-24,23;UBERON:0005058,2.04e-24,23;UBERON:0003351,2.04e-24,23;UBERON:0009113,2.04e-24,23;UBERON:0003295,2.04e-24,23;UBERON:0009722,2.04e-24,23;UBERON:0005562,2.04e-24,23;UBERON:0007690,2.04e-24,23;UBERON:0004177,5.97e-24,29;UBERON:0005057,5.97e-24,29;UBERON:0006562,4.09e-23,24;UBERON:0003408,4.09e-23,24;UBERON:0001557,4.09e-23,24;UBERON:0001042,4.09e-23,24;UBERON:0008814,4.09e-23,24;UBERON:0009145,4.09e-23,24;UBERON:0002390,7.51e-20,45;UBERON:0003061,7.51e-20,45;UBERON:0000072,8.58e-20,27;UBERON:0002193,9.67e-20,48;UBERON:0002405,9.67e-20,48;UBERON:0000065,5.18e-19,41;UBERON:0000077,1.55e-18,35;UBERON:0001004,2.32e-18,42;UBERON:0007811,3.30e-13,36;UBERON:0003081,8.39e-11,87;UBERON:0000153,4.78e-10,43;UBERON:0001041,7.43e-09,80;UBERON:0005911,7.46e-09,69;UBERON:0003929,2.70e-07,55|phase1_expression=0,0,0,0,0,0,0,21.6927183381848,16.6130692138967,12.4054198950657,4.45166717386313,8.69516533049167,55.6402372276419,48.4309029401246,1.33243904726265,1.61980213911861,0.699561878128147,3.3123527362615,7.40417941470989,1.69755860719212,16.0731818385522,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,34.0920206745332,39.9951620979532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,5.75822122540183,0,0,0,0,0,0,0,0,0.253359865475099,0,9.02052649780574,31.8493596886021,0.890652834388949,0,0,0,0,0,0.125666591329675,0,1.01219549843938,0,0,0,0,0,0.292780797011547,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.505445516867349,0.210441855886474,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,3.15266424391358,0,1.64167464079095,2.67527071501324,4.82459958503597,2.85415149878366,0.939444931322602,0,0.102904612379284,2.97376904685418,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0.502670417600539,0.397912944082302,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11642284300551,0.312037673114561,0.252578877947112,0,0.482443521363367,3.32555742299888,0,0,0,0,7.03526281255626,0,0.975668239288994,1.41871629695572,0.44292937929755,1.2756381492599,1.3109065177259,1.72684981865896,0.723245292907558,0,0,0.491764273019036,1.37968373152366,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,1.32745138339963,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0,0.238744688006273,0.656563598980245,0.582961673259701,0,2.05045056957423,0,0.185194527369712,0.941842285023455,2.05041341581538,2.74533807847827,0,0,0,0,0,0,0,0,0.655087691238533,0.269728692769641,0.495920734352016,0,0.259229946583586,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0,0,0,476.544769907293,5.87903124341476,28.553646091822,73.7950274513876,151.993664621692,263.650157794739,252.891225790014,291.68681616979,414.568243487094,377.680933782179,484.268167212245,486.022451249145,473.16983718714,616.408782105595,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.666740183404846,1.23621034343337,0.962757628775446,1.51618327058278,1.01391719956096,1.50901073108861,0.936415074698824,1.21647789569252,1.09127391015665,1.90517476513229,0.927074607558844,0.38581844092741,0.824171801606613,0.147198920134397,1.02860775715625,1.06485483695602,0.953744759789284,1.45346416632329,1.41164070622996,1.52306294205018,2.37806364734604,1.31534855718921,1.22223702461276,0,0.593175090620871,0.689531376628944,1.22769312950907,0.929621047115796,0.964533054905707,0,1.87145286756327,3.22306581072447,0.382576664137687,0.441182838239031,0.463735671240843|short_description=p1@Themis}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=210757 | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BGW0 | |||
|association_with_transcript=0bp_to_ENSMUST00000105516,ENSMUST00000162343,NM_178666,uc007eso.1,uc007esp.1,uc007esq.1_5end | |||
|cluster_id=chr10:28388194..28388210,+ | |||
|description=CAGE_peak_1_at_Themis_5end | |||
|id=chr10:28388194..28388210,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.17e-08!9;CL:0000789!1.17e-08!9;CL:0002420!1.17e-08!9;CL:0002419!1.17e-08!9;CL:0000790!1.17e-08!9;CL:0000624!7.95e-08!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.05e-13,9;CL:0000789,7.05e-13,9;CL:0002420,7.05e-13,9;CL:0002419,7.05e-13,9;CL:0000790,7.05e-13,9;CL:0000624,1.48e-11,8;CL:0000084,4.14e-10,11;CL:0000827,4.14e-10,11;CL:0000838,4.47e-09,12;CL:0000893,5.40e-09,6;CL:0002489,5.40e-09,6;CL:0000898,5.40e-09,6;CL:0000809,5.40e-09,6;CL:0000810,5.40e-09,6;CL:0000895,5.40e-09,6;CL:0000808,5.40e-09,6;CL:0000894,5.40e-09,6;CL:0000806,5.40e-09,6;CL:0000807,5.40e-09,6;CL:0000805,5.40e-09,6;CL:0002425,5.40e-09,6;CL:0002436,5.40e-09,6;CL:0002427,5.40e-09,6;CL:0002428,5.40e-09,6;CL:0002429,5.40e-09,6;CL:0002433,5.40e-09,6;CL:0002431,5.40e-09,6;CL:0002432,5.40e-09,6;CL:0002031,3.29e-08,25;CL:0000542,3.33e-08,13;CL:0000051,3.33e-08,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.57e-16!29;UBERON:0003408!2.12e-15!24;UBERON:0002370!4.02e-15!23;UBERON:0000974!4.02e-15!23;UBERON:0004807!4.02e-15!23;UBERON:0005058!4.02e-15!23;UBERON:0003351!4.02e-15!23;UBERON:0009113!4.02e-15!23;UBERON:0003295!4.02e-15!23;UBERON:0009722!4.02e-15!23;UBERON:0005562!4.02e-15!23;UBERON:0007690!4.02e-15!23;UBERON:0006562!4.17e-14!24;UBERON:0001557!4.17e-14!24;UBERON:0001042!4.17e-14!24;UBERON:0008814!4.17e-14!24;UBERON:0009145!4.17e-14!24;UBERON:0001004!6.41e-14!42;UBERON:0000065!1.40e-13!41;UBERON:0002193!4.44e-13!48;UBERON:0002390!8.77e-13!45;UBERON:0003061!8.77e-13!45;UBERON:0000072!1.75e-12!27;UBERON:0000063!5.50e-10!35;UBERON:0005057!1.97e-07!51;UBERON:0002405!3.02e-07!70;UBERON:0003081!5.36e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.04e-24,23;UBERON:0000974,2.04e-24,23;UBERON:0004807,2.04e-24,23;UBERON:0005058,2.04e-24,23;UBERON:0003351,2.04e-24,23;UBERON:0009113,2.04e-24,23;UBERON:0003295,2.04e-24,23;UBERON:0009722,2.04e-24,23;UBERON:0005562,2.04e-24,23;UBERON:0007690,2.04e-24,23;UBERON:0004177,5.97e-24,29;UBERON:0005057,5.97e-24,29;UBERON:0006562,4.09e-23,24;UBERON:0003408,4.09e-23,24;UBERON:0001557,4.09e-23,24;UBERON:0001042,4.09e-23,24;UBERON:0008814,4.09e-23,24;UBERON:0009145,4.09e-23,24;UBERON:0002390,7.51e-20,45;UBERON:0003061,7.51e-20,45;UBERON:0000072,8.58e-20,27;UBERON:0002193,9.67e-20,48;UBERON:0002405,9.67e-20,48;UBERON:0000065,5.18e-19,41;UBERON:0000077,1.55e-18,35;UBERON:0001004,2.32e-18,42;UBERON:0007811,3.30e-13,36;UBERON:0003081,8.39e-11,87;UBERON:0000153,4.78e-10,43;UBERON:0001041,7.43e-09,80;UBERON:0005911,7.46e-09,69;UBERON:0003929,2.70e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,21.6927183381848,16.6130692138967,12.4054198950657,4.45166717386313,8.69516533049167,55.6402372276419,48.4309029401246,1.33243904726265,1.61980213911861,0.699561878128147,3.3123527362615,7.40417941470989,1.69755860719212,16.0731818385522,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,34.0920206745332,39.9951620979532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,5.75822122540183,0,0,0,0,0,0,0,0,0.253359865475099,0,9.02052649780574,31.8493596886021,0.890652834388949,0,0,0,0,0,0.125666591329675,0,1.01219549843938,0,0,0,0,0,0.292780797011547,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.505445516867349,0.210441855886474,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,3.15266424391358,0,1.64167464079095,2.67527071501324,4.82459958503597,2.85415149878366,0.939444931322602,0,0.102904612379284,2.97376904685418,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0.502670417600539,0.397912944082302,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11642284300551,0.312037673114561,0.252578877947112,0,0.482443521363367,3.32555742299888,0,0,0,0,7.03526281255626,0,0.975668239288994,1.41871629695572,0.44292937929755,1.2756381492599,1.3109065177259,1.72684981865896,0.723245292907558,0,0,0.491764273019036,1.37968373152366,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,1.32745138339963,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0,0.238744688006273,0.656563598980245,0.582961673259701,0,2.05045056957423,0,0.185194527369712,0.941842285023455,2.05041341581538,2.74533807847827,0,0,0,0,0,0,0,0,0.655087691238533,0.269728692769641,0.495920734352016,0,0.259229946583586,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0,0,0,476.544769907293,5.87903124341476,28.553646091822,73.7950274513876,151.993664621692,263.650157794739,252.891225790014,291.68681616979,414.568243487094,377.680933782179,484.268167212245,486.022451249145,473.16983718714,616.408782105595,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.666740183404846,1.23621034343337,0.962757628775446,1.51618327058278,1.01391719956096,1.50901073108861,0.936415074698824,1.21647789569252,1.09127391015665,1.90517476513229,0.927074607558844,0.38581844092741,0.824171801606613,0.147198920134397,1.02860775715625,1.06485483695602,0.953744759789284,1.45346416632329,1.41164070622996,1.52306294205018,2.37806364734604,1.31534855718921,1.22223702461276,0,0.593175090620871,0.689531376628944,1.22769312950907,0.929621047115796,0.964533054905707,0,1.87145286756327,3.22306581072447,0.382576664137687,0.441182838239031,0.463735671240843 | |||
|short_description=p1@Themis | |||
}} |
Latest revision as of 22:30, 25 September 2015
Short description: | p1@Themis |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Themis_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | 0bp_to_ENSMUST00000105516, ENSMUST00000162343, NM_178666, uc007eso.1, uc007esp.1, uc007esq.1_5end |
EntrezGene: | Themis |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.04e-24 | 23 |
neck | 2.04e-24 | 23 |
respiratory system epithelium | 2.04e-24 | 23 |
hemolymphoid system gland | 2.04e-24 | 23 |
pharyngeal epithelium | 2.04e-24 | 23 |
thymic region | 2.04e-24 | 23 |
pharyngeal gland | 2.04e-24 | 23 |
entire pharyngeal arch endoderm | 2.04e-24 | 23 |
thymus primordium | 2.04e-24 | 23 |
early pharyngeal endoderm | 2.04e-24 | 23 |
hemopoietic organ | 5.97e-24 | 29 |
immune organ | 5.97e-24 | 29 |
pharynx | 4.09e-23 | 24 |
gland of gut | 4.09e-23 | 24 |
upper respiratory tract | 4.09e-23 | 24 |
chordate pharynx | 4.09e-23 | 24 |
pharyngeal arch system | 4.09e-23 | 24 |
pharyngeal region of foregut | 4.09e-23 | 24 |
hematopoietic system | 7.51e-20 | 45 |
blood island | 7.51e-20 | 45 |
segment of respiratory tract | 8.58e-20 | 27 |
hemolymphoid system | 9.67e-20 | 48 |
immune system | 9.67e-20 | 48 |
respiratory tract | 5.18e-19 | 41 |
mixed endoderm/mesoderm-derived structure | 1.55e-18 | 35 |
respiratory system | 2.32e-18 | 42 |
craniocervical region | 3.30e-13 | 36 |
lateral plate mesoderm | 8.39e-11 | 87 |
anterior region of body | 4.78e-10 | 43 |
foregut | 7.43e-09 | 80 |
endo-epithelium | 7.46e-09 | 69 |
gut epithelium | 2.70e-07 | 55 |