FFCP PHASE1:Mm9::chr19:7093818..7093829,-: Difference between revisions
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{{FFCP|EntrezGene=108101|HGNC=|MCL_coexpression_id=241|UniProt=Q8K1B8,Q3TEE6|association_with_transcript=129bp_to_ENSMUST00000040772,NM_153795,uc008gkd.2,uc012bht.1_5end|description=CAGE_peak_3_at_Fermt3_5end|id=chr19:7093818..7093829,-|ontology_enrichment_celltype=CL:0000988!1.06e-09!32;CL:0002032!1.06e-09!32;CL:0000037!1.06e-09!32;CL:0000566!1.06e-09!32;CL:0000837!1.06e-09!32;CL:0002031!4.16e-08!25;CL:0000049!1.86e-07!19;CL:0000050!2.20e-07!9;CL:0000763!2.69e-07!16|ontology_enrichment_celltype_v019_2=CL:0000050,7.84e-15,9;CL:0000049,3.38e-12,19;CL:0000839,7.17e-12,13;CL:0000763,6.12e-11,16;CL:0000988,7.53e-11,32;CL:0002032,7.53e-11,32;CL:0000037,7.53e-11,32;CL:0000837,7.53e-11,32;CL:0002031,3.22e-10,25;CL:0000553,1.81e-09,6;CL:0000556,1.81e-09,6;CL:0002320,2.74e-07,46;CL:0000134,2.74e-07,46;CL:0000764,5.18e-07,3;CL:0000765,5.18e-07,3;CL:0000038,5.18e-07,3;CL:0000547,5.18e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,1.35e-11,6;DOID:2531,5.18e-07,3;DOID:0060083,5.18e-07,3;DOID:1240,5.18e-07,3|ontology_enrichment_uberon=UBERON:0002405!4.10e-13!70;UBERON:0002193!2.93e-10!48;UBERON:0002390!9.94e-10!45;UBERON:0003061!9.94e-10!45;UBERON:0005057!3.95e-08!51;UBERON:0003081!1.47e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.92e-10,6;UBERON:0004457,1.92e-10,6;UBERON:0000042,1.92e-10,6;UBERON:0004854,1.92e-10,6;UBERON:0009034,1.92e-10,6;UBERON:0002095,1.92e-10,6;UBERON:0004782,1.92e-10,6;UBERON:0003281,1.92e-10,6;UBERON:0009664,1.92e-10,6;UBERON:0002296,1.92e-10,6;UBERON:0005602,1.92e-10,6;UBERON:0001179,1.92e-10,6;UBERON:0006293,1.92e-10,6;UBERON:0001474,1.06e-09,22;UBERON:0004765,1.06e-09,22;UBERON:0001434,1.06e-09,22;UBERON:0002204,1.43e-09,32;UBERON:0005172,3.83e-08,49;UBERON:0005173,3.83e-08,49;UBERON:0002417,3.83e-08,49;UBERON:0000916,3.83e-08,49;UBERON:0003887,7.11e-08,10;UBERON:0002107,2.09e-07,22;UBERON:0007499,2.09e-07,22;UBERON:0006925,2.09e-07,22;UBERON:0009497,2.09e-07,22;UBERON:0000015,2.09e-07,22;UBERON:0002423,2.09e-07,22;UBERON:0006235,2.09e-07,22;UBERON:0008835,2.09e-07,22;UBERON:0003894,2.09e-07,22;UBERON:0004161,2.09e-07,22;UBERON:0008836,2.09e-07,22;UBERON:0002384,2.74e-07,46;UBERON:0009854,5.63e-07,23;UBERON:0009856,5.63e-07,23;UBERON:0000981,6.38e-07,4;UBERON:0003608,6.38e-07,4;UBERON:0003826,6.38e-07,4;UBERON:0008202,6.38e-07,4;UBERON:0004381,6.38e-07,4;UBERON:0007273,6.38e-07,4;UBERON:0010912,6.38e-07,4;UBERON:0002513,6.38e-07,4;UBERON:0004375,6.38e-07,4;UBERON:0010740,6.38e-07,4;UBERON:0010363,6.38e-07,4;UBERON:0003860,6.38e-07,4;UBERON:0002428,6.38e-07,4;UBERON:0010742,6.38e-07,4;UBERON:0002495,6.38e-07,4;UBERON:0003464,6.38e-07,4;UBERON:0003606,6.38e-07,4;UBERON:0005893,6.38e-07,4;UBERON:0009749,6.38e-07,4;UBERON:0010712,6.38e-07,4;UBERON:0010886,6.38e-07,4;UBERON:0005254,6.38e-07,4;UBERON:0010885,6.38e-07,4;UBERON:0010881,6.38e-07,4;UBERON:0010882,6.38e-07,4;UBERON:0007844,6.38e-07,4;UBERON:0001441,6.38e-07,4;UBERON:0011249,6.38e-07,4;UBERON:0002091,6.38e-07,4;UBERON:0003285,6.38e-07,4;UBERON:0004288,6.38e-07,4;UBERON:0010129,6.38e-07,4;UBERON:0006234,6.38e-07,4|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.281577444303333,1.17032263160997,0.171217968225505,0.0797721589953364,0.684802919724823,0.524522414513984,3.99731714178795,2.83465374345756,4.19737126876888,1.57731082679119,1.64537320326887,1.69755860719212,0,3.17731043842833,1.82839852397255,0.159992422793407,0.45881856213434,0,0,0,0,0,0,50.8024538767705,32.5984337419822,15.8481681015439,0,0,0,9.20769587621197,3.1253413780952,4.18818995179039,9.41170380849623,8.19654581950135,5.34061388334269,0,0,0,0,0,0,0,0,0,1.67782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0.988866362566974,3.5524005747305,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0.448026887097336,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0.776813650941515,0,0.520455980298408,1.52232739156071,0.230615497256059,0,0,0,0,0.433798070759735,7.07688441559899,1.29413479957927,2.20841518460394,2.90925151881133,0,0,0,0.510914110417183,2.15667224110656,0,1.01656181658452,0,0,0,0,0,0,0,0.203678727700633,3.11017426525233,0,0,0.260240885925407,0,0.180062129805349,0.150704817835715,0,0,0,0,0,0.378212160335639,0.351902248327898,0.219195732427575,0.278047249225598,0,0,0.199034266818493,0.702213187313235,0.772043721344145,1.13665399758237,0.828503090142008,0.234526059981096,0.180062061461015,0.23674473558521,0,0,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0.439100230582101,0.134206418760372,0,0,0.330418782983798,0,0.426576501070468,0,0,0,0.667134131534611,0.380451252225118,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0,0.456994050438915,0,0,0,0.0701358198903186,0,0,0,0,0.296452627087149,4.50481785433454,5.30709286805648,4.27238013531222,6.28866376304359,6.02942899381042,4.58326533206556,4.31544206176216,3.56697498905078,2.47105271869273,1.43768206527355,1.11642284300551,0,0.25257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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=108101 | |||
|HGNC= | |||
|MCL_coexpression_id=241 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K1B8,Q3TEE6 | |||
|association_with_transcript=129bp_to_ENSMUST00000040772,NM_153795,uc008gkd.2,uc012bht.1_5end | |||
|cluster_id=chr19:7093818..7093829,- | |||
|description=CAGE_peak_3_at_Fermt3_5end | |||
|id=chr19:7093818..7093829,- | |||
|ontology_enrichment_celltype=CL:0000988!1.06e-09!32;CL:0002032!1.06e-09!32;CL:0000037!1.06e-09!32;CL:0000566!1.06e-09!32;CL:0000837!1.06e-09!32;CL:0002031!4.16e-08!25;CL:0000049!1.86e-07!19;CL:0000050!2.20e-07!9;CL:0000763!2.69e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000050,7.84e-15,9;CL:0000049,3.38e-12,19;CL:0000839,7.17e-12,13;CL:0000763,6.12e-11,16;CL:0000988,7.53e-11,32;CL:0002032,7.53e-11,32;CL:0000037,7.53e-11,32;CL:0000837,7.53e-11,32;CL:0002031,3.22e-10,25;CL:0000553,1.81e-09,6;CL:0000556,1.81e-09,6;CL:0002320,2.74e-07,46;CL:0000134,2.74e-07,46;CL:0000764,5.18e-07,3;CL:0000765,5.18e-07,3;CL:0000038,5.18e-07,3;CL:0000547,5.18e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,1.35e-11,6;DOID:2531,5.18e-07,3;DOID:0060083,5.18e-07,3;DOID:1240,5.18e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002405!4.10e-13!70;UBERON:0002193!2.93e-10!48;UBERON:0002390!9.94e-10!45;UBERON:0003061!9.94e-10!45;UBERON:0005057!3.95e-08!51;UBERON:0003081!1.47e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.92e-10,6;UBERON:0004457,1.92e-10,6;UBERON:0000042,1.92e-10,6;UBERON:0004854,1.92e-10,6;UBERON:0009034,1.92e-10,6;UBERON:0002095,1.92e-10,6;UBERON:0004782,1.92e-10,6;UBERON:0003281,1.92e-10,6;UBERON:0009664,1.92e-10,6;UBERON:0002296,1.92e-10,6;UBERON:0005602,1.92e-10,6;UBERON:0001179,1.92e-10,6;UBERON:0006293,1.92e-10,6;UBERON:0001474,1.06e-09,22;UBERON:0004765,1.06e-09,22;UBERON:0001434,1.06e-09,22;UBERON:0002204,1.43e-09,32;UBERON:0005172,3.83e-08,49;UBERON:0005173,3.83e-08,49;UBERON:0002417,3.83e-08,49;UBERON:0000916,3.83e-08,49;UBERON:0003887,7.11e-08,10;UBERON:0002107,2.09e-07,22;UBERON:0007499,2.09e-07,22;UBERON:0006925,2.09e-07,22;UBERON:0009497,2.09e-07,22;UBERON:0000015,2.09e-07,22;UBERON:0002423,2.09e-07,22;UBERON:0006235,2.09e-07,22;UBERON:0008835,2.09e-07,22;UBERON:0003894,2.09e-07,22;UBERON:0004161,2.09e-07,22;UBERON:0008836,2.09e-07,22;UBERON:0002384,2.74e-07,46;UBERON:0009854,5.63e-07,23;UBERON:0009856,5.63e-07,23;UBERON:0000981,6.38e-07,4;UBERON:0003608,6.38e-07,4;UBERON:0003826,6.38e-07,4;UBERON:0008202,6.38e-07,4;UBERON:0004381,6.38e-07,4;UBERON:0007273,6.38e-07,4;UBERON:0010912,6.38e-07,4;UBERON:0002513,6.38e-07,4;UBERON:0004375,6.38e-07,4;UBERON:0010740,6.38e-07,4;UBERON:0010363,6.38e-07,4;UBERON:0003860,6.38e-07,4;UBERON:0002428,6.38e-07,4;UBERON:0010742,6.38e-07,4;UBERON:0002495,6.38e-07,4;UBERON:0003464,6.38e-07,4;UBERON:0003606,6.38e-07,4;UBERON:0005893,6.38e-07,4;UBERON:0009749,6.38e-07,4;UBERON:0010712,6.38e-07,4;UBERON:0010886,6.38e-07,4;UBERON:0005254,6.38e-07,4;UBERON:0010885,6.38e-07,4;UBERON:0010881,6.38e-07,4;UBERON:0010882,6.38e-07,4;UBERON:0007844,6.38e-07,4;UBERON:0001441,6.38e-07,4;UBERON:0011249,6.38e-07,4;UBERON:0002091,6.38e-07,4;UBERON:0003285,6.38e-07,4;UBERON:0004288,6.38e-07,4;UBERON:0010129,6.38e-07,4;UBERON:0006234,6.38e-07,4 | |||
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|short_description=p3@Fermt3 | |||
}} |
Latest revision as of 03:41, 26 September 2015
Short description: | p3@Fermt3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fermt3_5end |
Coexpression cluster: | MCL_coexpression_mm9:241 |
Association with transcript: | 129bp_to_ENSMUST00000040772, NM_153795, uc008gkd.2, uc012bht.1_5end |
EntrezGene: | Fermt3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte-erythroid progenitor cell | 7.84e-15 | 9 |
common myeloid progenitor | 3.38e-12 | 19 |
myeloid lineage restricted progenitor cell | 7.17e-12 | 13 |
myeloid cell | 6.12e-11 | 16 |
hematopoietic cell | 7.53e-11 | 32 |
hematopoietic oligopotent progenitor cell | 7.53e-11 | 32 |
hematopoietic stem cell | 7.53e-11 | 32 |
hematopoietic multipotent progenitor cell | 7.53e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 3.22e-10 | 25 |
megakaryocyte progenitor cell | 1.81e-09 | 6 |
megakaryocyte | 1.81e-09 | 6 |
connective tissue cell | 2.74e-07 | 46 |
mesenchymal cell | 2.74e-07 | 46 |
erythroid lineage cell | 5.18e-07 | 3 |
erythroblast | 5.18e-07 | 3 |
erythroid progenitor cell | 5.18e-07 | 3 |
proerythroblast | 5.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 1.35e-11 | 6 |
hematologic cancer | 5.18e-07 | 3 |
immune system cancer | 5.18e-07 | 3 |
leukemia | 5.18e-07 | 3 |