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FFCP PHASE1:Mm9::chr12:119540395..119540415,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20688
|EntrezGene=20688
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=Q62445,Q6DFV2
|UniProt=Q62445,Q6DFV2
|association_with_transcript=-482bp_to_ENSMUST00000026367,NM_001166385,NM_009239,uc007pif.2,uc011yvt.1_5end
|association_with_transcript=-482bp_to_ENSMUST00000026367,NM_001166385,NM_009239,uc007pif.2,uc011yvt.1_5end
|cluster_id=chr12:119540395..119540415,-
|description=CAGE_peak_5_at_Sp4_5end
|description=CAGE_peak_5_at_Sp4_5end
|id=chr12:119540395..119540415,-
|id=chr12:119540395..119540415,-
|ontology_enrichment_celltype=CL:0000791!2.78e-07!9;CL:0000789!2.78e-07!9;CL:0002420!2.78e-07!9;CL:0002419!2.78e-07!9;CL:0000790!2.78e-07!9
|ontology_enrichment_celltype=CL:0000791!2.78e-07!9;CL:0000789!2.78e-07!9;CL:0002420!2.78e-07!9;CL:0002419!2.78e-07!9;CL:0000790!2.78e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000791,1.69e-11,9;CL:0000789,1.69e-11,9;CL:0002420,1.69e-11,9;CL:0002419,1.69e-11,9;CL:0000790,1.69e-11,9;CL:0000624,2.39e-10,8;CL:0000838,1.12e-09,12;CL:0000084,7.09e-09,11;CL:0000827,7.09e-09,11;CL:0000542,1.10e-08,13;CL:0000051,1.10e-08,13;CL:0000893,4.10e-08,6;CL:0002489,4.10e-08,6;CL:0000898,4.10e-08,6;CL:0000809,4.10e-08,6;CL:0000810,4.10e-08,6;CL:0000895,4.10e-08,6;CL:0000808,4.10e-08,6;CL:0000894,4.10e-08,6;CL:0000806,4.10e-08,6;CL:0000807,4.10e-08,6;CL:0000805,4.10e-08,6;CL:0002425,4.10e-08,6;CL:0002436,4.10e-08,6;CL:0002427,4.10e-08,6;CL:0002428,4.10e-08,6;CL:0002429,4.10e-08,6;CL:0002433,4.10e-08,6;CL:0002431,4.10e-08,6;CL:0002432,4.10e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0000970,3.84e-07,9;UBERON:0000019,3.84e-07,9;UBERON:0000047,3.84e-07,9;UBERON:0010312,3.84e-07,9;UBERON:0004088,3.84e-07,9;UBERON:0002104,3.84e-07,9;UBERON:0001456,3.84e-07,9;UBERON:0003072,3.84e-07,9;UBERON:0004128,3.84e-07,9;UBERON:0003071,3.84e-07,9
|phase1_expression=0.480446541314382,0.348975407639361,0,1.20985684522732,0.500895729946347,1.84667199103079,0.934450562382103,4.77756296733832,29.2840542075467,22.0020654742674,2.56826952338257,1.91453181588807,5.82082481766099,3.4093956943409,0.666219523631325,1.01237633694913,2.79824751251259,0.473193248037357,0.822686601634433,0.84877930359606,0.765389611359628,0.198581902401771,0,0,0,1.14846392823004,1.29228598847722,1.07735616342945,0,0,0.221730510655305,3.17515336729816,0,0,2.3108129580102,0.332469290716985,3.06254034393554,1.25559489221072,1.5626706890476,0.523523743973798,2.94115744015507,1.36609096991689,0.971020706062307,0.125896817975577,0,0,0,0,0,0.194429899074283,0.279972843250725,0,1.8456086666351,2.90144856804538,4.03312558970957,0,0.286533439938757,0,1.21389876515759,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,1.03689612308478,0.945041568321835,1.89292465216244,0.571301968807607,0.441737081903227,1.46988959057945,1.91690942036473,0.919218786610021,0,0.383062014255563,0,1.45074916503213,0.914876436024097,1.56274011167028,0,0,0.61119299110724,0,0.569486723196412,1.1183966749518,0.37863096666592,0.604572480854284,14.4932244350839,0.860423876981386,0,0.539703191637817,0.649776417447669,0.448026887097336,0.280888840263504,0.170430322578058,0,0,0.563373679106722,0,0,0,0,0,0.505524445014783,0.34255163915718,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0,0,0,0.289198713839823,0,0.485300549842228,0.441683036920787,0,0,2.34224637609238,1.67557365450764,0,0.838705871541442,1.79970819298022,1.01656181658452,0.449371918214468,0.457500602818626,0.628271760564322,0.695297280769106,0.767146371990992,0.62336413367868,0.162241263067758,0,0.373220911830279,0,0.841767423545896,1.30120442962704,2.06911893990126,1.62055916824814,1.80845781402858,2.17716797284249,2.69038812598185,2.24884138943349,2.58703370739016,1.5089759505299,1.70195472151037,0.879755620819744,0.43839146485515,1.39023624612799,1.39300866608867,0.205782136407943,0.59710280045548,0.702213187313235,0.772043721344145,0,0.414251545071004,0.703578179943289,0.180062061461015,0.473489471170421,0.196764231747404,0.462801338662135,0.697601834251224,0.268273401399619,0.350296027101508,0,0.32833492815819,0.324275238183423,0.438599962275997,0,0,0.420579897128254,1.23485534855141,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.605050573870028,0.22237804384487,0.380451252225118,0,0.164698954724011,0.502670417600539,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.758671603812327,0.685491075658373,1.1270773567308,0,0.387904974335251,0.49095073923223,0.505892296994058,0.442830443938806,0.627994911365499,0.370191491765402,1.48226313543574,1.33476084572875,2.16214894624523,1.57403478669398,0.405720242777006,0.72353147925725,0.50925170356284,0.575392274901621,0.648540907100142,1.37280706594041,2.87536413054709,0.744281895337007,1.5601883655728,1.26289438973556,0.717589654087649,1.4473305640901,0.369506380333209,0.757965647081939,1.14075483509418,0.509235257325564,0.234690248288502,0.502518772325447,0.714130922658041,0.390267295715598,0.315270288212382,0.44292937929755,0.159454768657487,0.491589944147214,0,0.867894351489069,0,0,0,0,0.642202359951168,0.586058432961016,0,0.504941854408746,0.315508219416257,0.390438744296638,0.215423397732799,0.477937595905104,0.222798674082394,0,1.21443210502468,1.16902343164525,0.395287777946524,2.89189184779626,0.141940085208269,0.178065603667255,0.488660878060728,0.164970122972535,1.32745138339963,0.971122544619926,0,0.188605079755898,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,1.44048875225048,0.258717367565509,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0.882113592219848,0.16488625294148,0.161464426695906,0.301564624640779,0.477489376012546,0.328281799490123,0,0.741701208042039,1.19609616558497,0.82554747185289,0.925972636848558,1.31857919903284,1.77702496037333,0.686334519619568,0.849892149969277,1.53946597556024,2.48759952847963,0,0.632671987162271,0.406638934253697,0.432021363287205,0.209088296014469,0.218362563746178,0.539457385539283,0.330613822901344,0,0.129614973291793,0,1.12738587736838,0.897099276263873,0.827292452285488,1.16670713006429,1.16243841129958,1.85851738039856,0.469428954583016,0.651021924219751,3.25063967719704,2.89900944991207,2.59227005632079,0.632022241256357,1.01362607645082,0.513554785824136,1.94881234466693,0.537080087002444,0.993406773906324,0.240390899039938,0.590758108698309,0.605798699688886,0.762068066549998,0.302478555410522,0.38983152295901,0.769694733122636,0.467507608726276,0,2.44184548711471,5.02397597013064,1.84673078000486,0.19318959403219,0.187682475451182,0.36630324853453,0,0,0,0.920650473014354,2.29158205375759,0.859265911718438,1.37016503954128,0,0.675022500231806,0.900642406448441,0.906284817968409,0,1.03787347584177,1.59609949360412,1.19513524027894,0.729320151204882,1.25767897576789,0.551530525350042,0.666740183404846,0.412070114477788,1.60459604795908,0.505394423527595,0.760437899670719,0.188626341386076,0.37456602987953,0.512201219238954,0.631790158511746,1.90517476513229,0.579421629724277,0.38581844092741,0,0.441596760403192,0.342869252385415,0.70990322463735,0.476872379894642,0.581385666529314,0.376437521661322,0.423073039458382,0,0.526139422875686,0.407412341537585,1.12228454331548,0.711810108745045,0.492522411877817,0.409231043169689,0.309873682371932,0.578719832943424,0.999242311751784,1.16965804222704,0.429742108096597,0,0.882365676478062,0.231867835620421
|phase1_expression=0.480446541314382,0.348975407639361,0,1.20985684522732,0.500895729946347,1.84667199103079,0.934450562382103,4.77756296733832,29.2840542075467,22.0020654742674,2.56826952338257,1.91453181588807,5.82082481766099,3.4093956943409,0.666219523631325,1.01237633694913,2.79824751251259,0.473193248037357,0.822686601634433,0.84877930359606,0.765389611359628,0.198581902401771,0,0,0,1.14846392823004,1.29228598847722,1.07735616342945,0,0,0.221730510655305,3.17515336729816,0,0,2.3108129580102,0.332469290716985,3.06254034393554,1.25559489221072,1.5626706890476,0.523523743973798,2.94115744015507,1.36609096991689,0.971020706062307,0.125896817975577,0,0,0,0,0,0.194429899074283,0.279972843250725,0,1.8456086666351,2.90144856804538,4.03312558970957,0,0.286533439938757,0,1.21389876515759,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,1.03689612308478,0.945041568321835,1.89292465216244,0.571301968807607,0.441737081903227,1.46988959057945,1.91690942036473,0.919218786610021,0,0.383062014255563,0,1.45074916503213,0.914876436024097,1.56274011167028,0,0,0.61119299110724,0,0.569486723196412,1.1183966749518,0.37863096666592,0.604572480854284,14.4932244350839,0.860423876981386,0,0.539703191637817,0.649776417447669,0.448026887097336,0.280888840263504,0.170430322578058,0,0,0.563373679106722,0,0,0,0,0,0.505524445014783,0.34255163915718,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0,0,0,0.289198713839823,0,0.485300549842228,0.441683036920787,0,0,2.34224637609238,1.67557365450764,0,0.838705871541442,1.79970819298022,1.01656181658452,0.449371918214468,0.457500602818626,0.628271760564322,0.695297280769106,0.767146371990992,0.62336413367868,0.162241263067758,0,0.373220911830279,0,0.841767423545896,1.30120442962704,2.06911893990126,1.62055916824814,1.80845781402858,2.17716797284249,2.69038812598185,2.24884138943349,2.58703370739016,1.5089759505299,1.70195472151037,0.879755620819744,0.43839146485515,1.39023624612799,1.39300866608867,0.205782136407943,0.59710280045548,0.702213187313235,0.772043721344145,0,0.414251545071004,0.703578179943289,0.180062061461015,0.473489471170421,0.196764231747404,0.462801338662135,0.697601834251224,0.268273401399619,0.350296027101508,0,0.32833492815819,0.324275238183423,0.438599962275997,0,0,0.420579897128254,1.23485534855141,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.605050573870028,0.22237804384487,0.380451252225118,0,0.164698954724011,0.502670417600539,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.758671603812327,0.685491075658373,1.1270773567308,0,0.387904974335251,0.49095073923223,0.505892296994058,0.442830443938806,0.627994911365499,0.370191491765402,1.48226313543574,1.33476084572875,2.16214894624523,1.57403478669398,0.405720242777006,0.72353147925725,0.50925170356284,0.575392274901621,0.648540907100142,1.37280706594041,2.87536413054709,0.744281895337007,1.5601883655728,1.26289438973556,0.717589654087649,1.4473305640901,0.369506380333209,0.757965647081939,1.14075483509418,0.509235257325564,0.234690248288502,0.502518772325447,0.714130922658041,0.390267295715598,0.315270288212382,0.44292937929755,0.159454768657487,0.491589944147214,0,0.867894351489069,0,0,0,0,0.642202359951168,0.586058432961016,0,0.504941854408746,0.315508219416257,0.390438744296638,0.215423397732799,0.477937595905104,0.222798674082394,0,1.21443210502468,1.16902343164525,0.395287777946524,2.89189184779626,0.141940085208269,0.178065603667255,0.488660878060728,0.164970122972535,1.32745138339963,0.971122544619926,0,0.188605079755898,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,1.44048875225048,0.258717367565509,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0.882113592219848,0.16488625294148,0.161464426695906,0.301564624640779,0.477489376012546,0.328281799490123,0,0.741701208042039,1.19609616558497,0.82554747185289,0.925972636848558,1.31857919903284,1.77702496037333,0.686334519619568,0.849892149969277,1.53946597556024,2.48759952847963,0,0.632671987162271,0.406638934253697,0.432021363287205,0.209088296014469,0.218362563746178,0.539457385539283,0.330613822901344,0,0.129614973291793,0,1.12738587736838,0.897099276263873,0.827292452285488,1.16670713006429,1.16243841129958,1.85851738039856,0.469428954583016,0.651021924219751,3.25063967719704,2.89900944991207,2.59227005632079,0.632022241256357,1.01362607645082,0.513554785824136,1.94881234466693,0.537080087002444,0.993406773906324,0.240390899039938,0.590758108698309,0.605798699688886,0.762068066549998,0.302478555410522,0.38983152295901,0.769694733122636,0.467507608726276,0,2.44184548711471,5.02397597013064,1.84673078000486,0.19318959403219,0.187682475451182,0.36630324853453,0,0,0,0.920650473014354,2.29158205375759,0.859265911718438,1.37016503954128,0,0.675022500231806,0.900642406448441,0.906284817968409,0,1.03787347584177,1.59609949360412,1.19513524027894,0.729320151204882,1.25767897576789,0.551530525350042,0.666740183404846,0.412070114477788,1.60459604795908,0.505394423527595,0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|short_description=p5@Sp4
|short_description=p5@Sp4
}}
}}

Latest revision as of 10:50, 26 September 2015

Short description:p5@Sp4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Sp4_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: -482bp_to_ENSMUST00000026367, NM_001166385, NM_009239, uc007pif.2, uc011yvt.1_5end
EntrezGene:Sp4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Sp4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.78
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E729.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F222.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.91
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.82
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.41
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.49
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C62.18
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H11.78
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.49
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D93.25
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.02
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell1.69e-119
alpha-beta T cell1.69e-119
immature T cell1.69e-119
mature T cell1.69e-119
immature alpha-beta T cell1.69e-119
CD4-positive, alpha-beta T cell2.39e-108
lymphoid lineage restricted progenitor cell1.12e-0912
T cell7.09e-0911
pro-T cell7.09e-0911
lymphocyte1.10e-0813
common lymphoid progenitor1.10e-0813
thymocyte4.10e-086
double negative thymocyte4.10e-086
naive T cell4.10e-086
double-positive, alpha-beta thymocyte4.10e-086
CD4-positive, alpha-beta thymocyte4.10e-086
naive thymus-derived CD4-positive, alpha-beta T cell4.10e-086
DN4 thymocyte4.10e-086
DN1 thymic pro-T cell4.10e-086
DN2 thymocyte4.10e-086
DN3 thymocyte4.10e-086
immature single positive thymocyte4.10e-086
early T lineage precursor4.10e-086
mature CD4 single-positive thymocyte4.10e-086
resting double-positive thymocyte4.10e-086
double-positive blast4.10e-086
CD69-positive double-positive thymocyte4.10e-086
CD69-positive, CD4-positive single-positive thymocyte4.10e-086
CD4-positive, CD8-intermediate double-positive thymocyte4.10e-086
CD24-positive, CD4 single-positive thymocyte4.10e-086

Uber anatomy
Ontology termp-valuen
eye3.84e-079
camera-type eye3.84e-079
simple eye3.84e-079
immature eye3.84e-079
ocular region3.84e-079
visual system3.84e-079
face3.84e-079
optic cup3.84e-079
optic vesicle3.84e-079
eye primordium3.84e-079
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