FFCP PHASE1:Mm9::chr2:28048843..28048858,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56177 | |EntrezGene=56177 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |||
|UniProt=G3X9Q7,Q8R357,O88998,A3KGE4 | |UniProt=G3X9Q7,Q8R357,O88998,A3KGE4 | ||
|association_with_transcript=230bp_to_ENSMUST00000100244,NM_001038613,NM_001038614,uc008iya.1,uc008iyb.1_5end | |association_with_transcript=230bp_to_ENSMUST00000100244,NM_001038613,NM_001038614,uc008iya.1,uc008iyb.1_5end | ||
|cluster_id=chr2:28048843..28048858,+ | |||
|description=CAGE_peak_8_at_Olfm1_5end | |description=CAGE_peak_8_at_Olfm1_5end | ||
|id=chr2:28048843..28048858,+ | |id=chr2:28048843..28048858,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.27e-14!23;CL:0000337!3.27e-14!23;CL:0000540!5.85e-12!33;CL:0000047!5.85e-12!33;CL:0000031!5.85e-12!33;CL:0000404!5.85e-12!33;CL:0000221!7.17e-12!44;CL:0000133!7.17e-12!44;CL:0002319!1.11e-11!43;CL:0000393!5.27e-09!39;CL:0000211!5.27e-09!39;CL:0000055!8.57e-09!50 | |ontology_enrichment_celltype=CL:0000117!3.27e-14!23;CL:0000337!3.27e-14!23;CL:0000540!5.85e-12!33;CL:0000047!5.85e-12!33;CL:0000031!5.85e-12!33;CL:0000404!5.85e-12!33;CL:0000221!7.17e-12!44;CL:0000133!7.17e-12!44;CL:0002319!1.11e-11!43;CL:0000393!5.27e-09!39;CL:0000211!5.27e-09!39;CL:0000055!8.57e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.49e-23,23;CL:0000337,4.49e-23,23;CL:0000540,2.05e-14,33;CL:0000047,2.05e-14,33;CL:0000031,2.05e-14,33;CL:0000404,2.05e-14,33;CL:0000393,2.21e-11,39;CL:0000211,2.21e-11,39;CL:0002319,7.58e-10,43;CL:0000221,1.65e-09,44;CL:0000133,1.65e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.24e-32!75;UBERON:0001016!1.24e-32!75;UBERON:0001017!1.90e-32!73;UBERON:0005743!1.90e-32!73;UBERON:0002346!2.75e-31!71;UBERON:0003075!2.75e-31!71;UBERON:0007284!2.75e-31!71;UBERON:0004121!3.73e-30!102;UBERON:0000924!3.73e-30!102;UBERON:0006601!3.73e-30!102;UBERON:0001049!1.08e-29!52;UBERON:0005068!1.08e-29!52;UBERON:0006241!1.08e-29!52;UBERON:0007135!1.08e-29!52;UBERON:0000033!2.88e-29!63;UBERON:0000955!2.10e-28!50;UBERON:0006238!2.10e-28!50;UBERON:0002616!1.67e-27!49;UBERON:0003056!2.10e-25!49;UBERON:0003080!2.17e-23!40;UBERON:0002020!1.19e-22!34;UBERON:0002780!1.27e-22!39;UBERON:0001890!1.27e-22!39;UBERON:0006240!1.27e-22!39;UBERON:0002791!4.64e-19!29;UBERON:0003528!4.64e-19!29;UBERON:0001893!4.64e-19!29;UBERON:0007811!3.46e-16!86;UBERON:0000153!1.64e-13!94;UBERON:0000956!2.22e-13!21;UBERON:0001869!2.22e-13!21;UBERON:0000203!2.22e-13!21;UBERON:0002619!4.35e-11!17;UBERON:0002021!7.01e-10!10;UBERON:0000411!7.01e-10!10;UBERON:0001950!7.01e-10!10;UBERON:0002420!6.68e-07!8;UBERON:0007245!6.68e-07!8;UBERON:0010009!6.68e-07!8;UBERON:0010011!6.68e-07!8;UBERON:0000454!6.68e-07!8;UBERON:0003076!9.28e-07!12;UBERON:0003057!9.28e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!1.24e-32!75;UBERON:0001016!1.24e-32!75;UBERON:0001017!1.90e-32!73;UBERON:0005743!1.90e-32!73;UBERON:0002346!2.75e-31!71;UBERON:0003075!2.75e-31!71;UBERON:0007284!2.75e-31!71;UBERON:0004121!3.73e-30!102;UBERON:0000924!3.73e-30!102;UBERON:0006601!3.73e-30!102;UBERON:0001049!1.08e-29!52;UBERON:0005068!1.08e-29!52;UBERON:0006241!1.08e-29!52;UBERON:0007135!1.08e-29!52;UBERON:0000033!2.88e-29!63;UBERON:0000955!2.10e-28!50;UBERON:0006238!2.10e-28!50;UBERON:0002616!1.67e-27!49;UBERON:0003056!2.10e-25!49;UBERON:0003080!2.17e-23!40;UBERON:0002020!1.19e-22!34;UBERON:0002780!1.27e-22!39;UBERON:0001890!1.27e-22!39;UBERON:0006240!1.27e-22!39;UBERON:0002791!4.64e-19!29;UBERON:0003528!4.64e-19!29;UBERON:0001893!4.64e-19!29;UBERON:0007811!3.46e-16!86;UBERON:0000153!1.64e-13!94;UBERON:0000956!2.22e-13!21;UBERON:0001869!2.22e-13!21;UBERON:0000203!2.22e-13!21;UBERON:0002619!4.35e-11!17;UBERON:0002021!7.01e-10!10;UBERON:0000411!7.01e-10!10;UBERON:0001950!7.01e-10!10;UBERON:0002420!6.68e-07!8;UBERON:0007245!6.68e-07!8;UBERON:0010009!6.68e-07!8;UBERON:0010011!6.68e-07!8;UBERON:0000454!6.68e-07!8;UBERON:0003076!9.28e-07!12;UBERON:0003057!9.28e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.37e-49,54;UBERON:0001049,8.05e-46,52;UBERON:0005068,8.05e-46,52;UBERON:0006241,8.05e-46,52;UBERON:0007135,8.05e-46,52;UBERON:0001017,1.70e-43,73;UBERON:0001016,5.17e-42,75;UBERON:0000955,6.77e-39,47;UBERON:0006238,6.77e-39,47;UBERON:0002616,3.00e-37,46;UBERON:0002346,5.45e-37,64;UBERON:0003075,5.45e-37,64;UBERON:0007284,5.45e-37,64;UBERON:0002020,5.07e-36,34;UBERON:0003080,3.89e-34,40;UBERON:0002780,1.07e-32,39;UBERON:0001890,1.07e-32,39;UBERON:0006240,1.07e-32,39;UBERON:0004121,4.31e-32,95;UBERON:0000924,4.31e-32,95;UBERON:0006601,4.31e-32,95;UBERON:0010371,4.79e-31,73;UBERON:0003528,4.71e-29,29;UBERON:0002791,4.71e-29,29;UBERON:0001893,4.71e-29,29;UBERON:0003056,5.52e-28,49;UBERON:0010314,1.43e-23,92;UBERON:0000956,3.37e-18,21;UBERON:0001869,3.37e-18,21;UBERON:0000203,3.37e-18,21;UBERON:0002021,4.10e-18,10;UBERON:0000411,4.10e-18,10;UBERON:0001950,4.10e-18,10;UBERON:0002619,1.13e-15,17;UBERON:0000025,6.18e-15,114;UBERON:0004111,2.97e-13,122;UBERON:0002420,3.36e-12,8;UBERON:0007245,3.36e-12,8;UBERON:0010009,3.36e-12,8;UBERON:0010011,3.36e-12,8;UBERON:0000454,3.36e-12,8;UBERON:0003076,2.55e-11,12;UBERON:0003057,2.55e-11,12;UBERON:0002240,2.84e-09,6;UBERON:0005174,2.84e-09,6;UBERON:0001137,2.84e-09,6;UBERON:0011216,7.91e-09,194;UBERON:0001948,4.82e-08,5;UBERON:0002315,4.82e-08,5;UBERON:0000369,9.74e-08,5;UBERON:0002435,9.74e-08,5;UBERON:0000204,9.74e-08,5;UBERON:0010082,9.74e-08,5;UBERON:0002950,2.01e-07,4;UBERON:0001891,2.01e-07,4;UBERON:0009616,2.01e-07,4;UBERON:0010286,2.01e-07,4;UBERON:0000483,9.44e-07,174 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31668831589172,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.219686182734472,0.777719596297134,0,0,0,0,0,0,0,0,4.85559506063035,7.40587370980846,4.43681982454325,0,0,0,0,0,0.898800331555214,0.768436610643109,1.45165457231869,0.810035629990144,1.47227472945967,5.99867067247988,8.39300455616131,0.857435594504678,1.0543001812006,0,5.50579404996943,8.2996769755372,7.37311359629969,6.4624280987795,7.04454855738554,4.16730696445408,9.77140496504833,8.4414391504752,8.09830713217094,6.18720029494702,5.97961059356232,4.84638559145781,0.227178579999552,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0.173485326766136,1.21786191324856,0.230615497256059,0.753613202763113,0.587943535678524,0,0,0.289198713839823,0.884610551949874,0,0,0,0,4.09893115816166,2.30391377494801,0,0,0,0,7.33974133083631,6.40500843946077,2.1361239859187,17.2086076990354,16.6215047264715,9.3504620051802,7.94982189032012,0,0.124406970610093,0,0,0.390361328888111,0.689706313300419,0.360124259610698,0.452114453507145,0.816437989815934,0.768682321709099,0.749613796477831,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1408762966172,2.16099685996497,0,0,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,0.379335801906163,0,0,0,0.387904974335251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,6.74312477948726,4.92289083687253,0,0,0,0.390438744296638,0,0.477937595905104,0.222798674082394,0.283076530788832,0,0.584511715822624,0,10.9249247583414,0.283880170416537,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0.775284879504663,0,0,0,0,0,10.2131881726136,0,0.258717367565509,0.643011105094777,0.177340233642274,1.24858172321449,2.46823530903181,5.78483403317739,0,0,0,0,0,0,0,0,0,5.56275906031529,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0.209718688851422,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.563047426353546,0,0,0,10.1655331671072,12.4287813856938,9.16632821503035,8.248952752497,26.718218271055,18.1294535373528,24.9758325085768,28.8205570063501,27.6416869480365,26.9235362110946,0.207574695168353,1.59609949360412,0.170733605754134,0.486213434136588,0.628839487883947,0,0.666740183404846,0.412070114477788,0.962757628775446,0.505394423527595,0.25347929989024,0.754505365544305,0.655490552289177,0.640251524048693,0.746661096422973,0.952587382566147,0.927074607558844,0.38581844092741,0.412085900803307,0.294397840268795,1.37147700954166,0.887379030796687,0.238436189947321,1.16277133305863,0.188218760830661,0.169229215783353,0.548783918618318,0.263069711437843,0.679020569229309,1.12228454331548,0.830445126869219,0.689531376628944,0.409231043169689,0.929621047115796,0.578719832943424,1.49886346762768,0,1.28922632428979,0.57386499620653,0.220591419119515,0 | |phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31668831589172,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.219686182734472,0.777719596297134,0,0,0,0,0,0,0,0,4.85559506063035,7.40587370980846,4.43681982454325,0,0,0,0,0,0.898800331555214,0.768436610643109,1.45165457231869,0.810035629990144,1.47227472945967,5.99867067247988,8.39300455616131,0.857435594504678,1.0543001812006,0,5.50579404996943,8.2996769755372,7.37311359629969,6.4624280987795,7.04454855738554,4.16730696445408,9.77140496504833,8.4414391504752,8.09830713217094,6.18720029494702,5.97961059356232,4.84638559145781,0.227178579999552,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0.173485326766136,1.21786191324856,0.230615497256059,0.753613202763113,0.587943535678524,0,0,0.289198713839823,0.884610551949874,0,0,0,0,4.09893115816166,2.30391377494801,0,0,0,0,7.33974133083631,6.40500843946077,2.1361239859187,17.2086076990354,16.6215047264715,9.3504620051802,7.94982189032012,0,0.124406970610093,0,0,0.390361328888111,0.689706313300419,0.360124259610698,0.452114453507145,0.816437989815934,0.768682321709099,0.749613796477831,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1408762966172,2.16099685996497,0,0,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,0.379335801906163,0,0,0,0.387904974335251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,6.74312477948726,4.92289083687253,0,0,0,0.390438744296638,0,0.477937595905104,0.222798674082394,0.283076530788832,0,0.584511715822624,0,10.9249247583414,0.283880170416537,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0.775284879504663,0,0,0,0,0,10.2131881726136,0,0.258717367565509,0.643011105094777,0.177340233642274,1.24858172321449,2.46823530903181,5.78483403317739,0,0,0,0,0,0,0,0,0,5.56275906031529,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0.209718688851422,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.563047426353546,0,0,0,10.1655331671072,12.4287813856938,9.16632821503035,8.248952752497,26.718218271055,18.1294535373528,24.9758325085768,28.8205570063501,27.6416869480365,26.9235362110946,0.207574695168353,1.59609949360412,0.170733605754134,0.486213434136588,0.628839487883947,0,0.666740183404846,0.412070114477788,0.962757628775446,0.505394423527595,0.25347929989024,0.754505365544305,0.655490552289177,0.640251524048693,0.746661096422973,0.952587382566147,0.927074607558844,0.38581844092741,0.412085900803307,0.294397840268795,1.37147700954166,0.887379030796687,0.238436189947321,1.16277133305863,0.188218760830661,0.169229215783353,0.548783918618318,0.263069711437843,0.679020569229309,1.12228454331548,0.830445126869219,0.689531376628944,0.409231043169689,0.929621047115796,0.578719832943424,1.49886346762768,0,1.28922632428979,0.57386499620653,0.220591419119515,0 | ||
|short_description=p8@Olfm1 | |short_description=p8@Olfm1 | ||
}} | }} |
Latest revision as of 11:53, 26 September 2015
Short description: | p8@Olfm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Olfm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 230bp_to_ENSMUST00000100244, NM_001038613, NM_001038614, uc008iya.1, uc008iyb.1_5end |
EntrezGene: | Olfm1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.49e-23 | 23 |
neuroblast (sensu Vertebrata) | 4.49e-23 | 23 |
neuron | 2.05e-14 | 33 |
neuronal stem cell | 2.05e-14 | 33 |
neuroblast | 2.05e-14 | 33 |
electrically signaling cell | 2.05e-14 | 33 |
electrically responsive cell | 2.21e-11 | 39 |
electrically active cell | 2.21e-11 | 39 |
neural cell | 7.58e-10 | 43 |
ectodermal cell | 1.65e-09 | 44 |
neurectodermal cell | 1.65e-09 | 44 |