FFCP PHASE1:Mm9::chr6:119280686..119280712,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=211187 | |EntrezGene=211187 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=251 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BGX3 | |UniProt=Q8BGX3 | ||
|association_with_transcript=0bp_to_ENSMUST00000112756_5end | |association_with_transcript=0bp_to_ENSMUST00000112756_5end | ||
|cluster_id=chr6:119280686..119280712,- | |||
|description=CAGE_peak_3_at_Lrtm2_5end | |description=CAGE_peak_3_at_Lrtm2_5end | ||
|id=chr6:119280686..119280712,- | |id=chr6:119280686..119280712,- | ||
|ontology_enrichment_celltype=CL:0000117!3.43e-14!23;CL:0000337!3.43e-14!23;CL:0000221!1.55e-10!44;CL:0000133!1.55e-10!44;CL:0002319!4.45e-10!43;CL:0000540!1.26e-08!33;CL:0000047!1.26e-08!33;CL:0000031!1.26e-08!33;CL:0000404!1.26e-08!33;CL:0000055!2.17e-07!50 | |ontology_enrichment_celltype=CL:0000117!3.43e-14!23;CL:0000337!3.43e-14!23;CL:0000221!1.55e-10!44;CL:0000133!1.55e-10!44;CL:0002319!4.45e-10!43;CL:0000540!1.26e-08!33;CL:0000047!1.26e-08!33;CL:0000031!1.26e-08!33;CL:0000404!1.26e-08!33;CL:0000055!2.17e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.05e-18,23;CL:0000337,3.05e-18,23;CL:0000540,1.55e-11,33;CL:0000047,1.55e-11,33;CL:0000031,1.55e-11,33;CL:0000404,1.55e-11,33;CL:0002319,2.90e-09,43;CL:0000393,3.47e-09,39;CL:0000211,3.47e-09,39;CL:0000221,5.78e-09,44;CL:0000133,5.78e-09,44;CL:0002610,2.79e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.77e-31!63;UBERON:0001017!5.20e-28!73;UBERON:0005743!5.20e-28!73;UBERON:0000073!1.38e-27!75;UBERON:0001016!1.38e-27!75;UBERON:0001049!2.06e-27!52;UBERON:0005068!2.06e-27!52;UBERON:0006241!2.06e-27!52;UBERON:0007135!2.06e-27!52;UBERON:0000955!5.11e-26!50;UBERON:0006238!5.11e-26!50;UBERON:0002346!2.06e-25!71;UBERON:0003075!2.06e-25!71;UBERON:0007284!2.06e-25!71;UBERON:0004121!2.16e-25!102;UBERON:0000924!2.16e-25!102;UBERON:0006601!2.16e-25!102;UBERON:0002616!5.81e-25!49;UBERON:0003056!2.97e-24!49;UBERON:0002020!8.99e-24!34;UBERON:0002791!2.18e-19!29;UBERON:0003528!2.18e-19!29;UBERON:0001893!2.18e-19!29;UBERON:0003080!3.99e-19!40;UBERON:0007811!3.44e-18!86;UBERON:0002780!3.58e-18!39;UBERON:0001890!3.58e-18!39;UBERON:0006240!3.58e-18!39;UBERON:0000153!5.03e-15!94;UBERON:0002619!3.73e-14!17;UBERON:0000956!5.97e-13!21;UBERON:0001869!5.97e-13!21;UBERON:0000203!5.97e-13!21;UBERON:0002021!2.94e-10!10;UBERON:0000411!2.94e-10!10;UBERON:0001950!2.94e-10!10;UBERON:0003076!7.66e-09!12;UBERON:0003057!7.66e-09!12;UBERON:0000025!9.51e-08!114;UBERON:0002420!9.71e-08!8;UBERON:0007245!9.71e-08!8;UBERON:0010009!9.71e-08!8;UBERON:0010011!9.71e-08!8;UBERON:0000454!9.71e-08!8;UBERON:0004111!2.64e-07!122 | |ontology_enrichment_uberon=UBERON:0000033!3.77e-31!63;UBERON:0001017!5.20e-28!73;UBERON:0005743!5.20e-28!73;UBERON:0000073!1.38e-27!75;UBERON:0001016!1.38e-27!75;UBERON:0001049!2.06e-27!52;UBERON:0005068!2.06e-27!52;UBERON:0006241!2.06e-27!52;UBERON:0007135!2.06e-27!52;UBERON:0000955!5.11e-26!50;UBERON:0006238!5.11e-26!50;UBERON:0002346!2.06e-25!71;UBERON:0003075!2.06e-25!71;UBERON:0007284!2.06e-25!71;UBERON:0004121!2.16e-25!102;UBERON:0000924!2.16e-25!102;UBERON:0006601!2.16e-25!102;UBERON:0002616!5.81e-25!49;UBERON:0003056!2.97e-24!49;UBERON:0002020!8.99e-24!34;UBERON:0002791!2.18e-19!29;UBERON:0003528!2.18e-19!29;UBERON:0001893!2.18e-19!29;UBERON:0003080!3.99e-19!40;UBERON:0007811!3.44e-18!86;UBERON:0002780!3.58e-18!39;UBERON:0001890!3.58e-18!39;UBERON:0006240!3.58e-18!39;UBERON:0000153!5.03e-15!94;UBERON:0002619!3.73e-14!17;UBERON:0000956!5.97e-13!21;UBERON:0001869!5.97e-13!21;UBERON:0000203!5.97e-13!21;UBERON:0002021!2.94e-10!10;UBERON:0000411!2.94e-10!10;UBERON:0001950!2.94e-10!10;UBERON:0003076!7.66e-09!12;UBERON:0003057!7.66e-09!12;UBERON:0000025!9.51e-08!114;UBERON:0002420!9.71e-08!8;UBERON:0007245!9.71e-08!8;UBERON:0010009!9.71e-08!8;UBERON:0010011!9.71e-08!8;UBERON:0000454!9.71e-08!8;UBERON:0004111!2.64e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.05e-42,54;UBERON:0001049,2.85e-38,52;UBERON:0005068,2.85e-38,52;UBERON:0006241,2.85e-38,52;UBERON:0007135,2.85e-38,52;UBERON:0002346,1.06e-37,64;UBERON:0003075,1.06e-37,64;UBERON:0007284,1.06e-37,64;UBERON:0001017,2.80e-37,73;UBERON:0001016,4.81e-36,75;UBERON:0004121,3.63e-33,95;UBERON:0000924,3.63e-33,95;UBERON:0006601,3.63e-33,95;UBERON:0002020,5.35e-32,34;UBERON:0010371,5.70e-32,73;UBERON:0000955,2.41e-30,47;UBERON:0006238,2.41e-30,47;UBERON:0002616,1.69e-28,46;UBERON:0003056,3.81e-24,49;UBERON:0003528,1.07e-23,29;UBERON:0002791,1.07e-23,29;UBERON:0001893,1.07e-23,29;UBERON:0010314,1.51e-23,92;UBERON:0003080,2.49e-22,40;UBERON:0002780,1.11e-20,39;UBERON:0001890,1.11e-20,39;UBERON:0006240,1.11e-20,39;UBERON:0002021,1.02e-19,10;UBERON:0000411,1.02e-19,10;UBERON:0001950,1.02e-19,10;UBERON:0003076,2.21e-17,12;UBERON:0003057,2.21e-17,12;UBERON:0002420,1.83e-14,8;UBERON:0007245,1.83e-14,8;UBERON:0010009,1.83e-14,8;UBERON:0010011,1.83e-14,8;UBERON:0000454,1.83e-14,8;UBERON:0000025,5.73e-13,114;UBERON:0002619,5.81e-13,17;UBERON:0000956,4.35e-12,21;UBERON:0001869,4.35e-12,21;UBERON:0000203,4.35e-12,21;UBERON:0002240,9.22e-12,6;UBERON:0005174,9.22e-12,6;UBERON:0001137,9.22e-12,6;UBERON:0004111,1.39e-11,122;UBERON:0001948,4.43e-10,5;UBERON:0002315,4.43e-10,5;UBERON:0000369,1.46e-09,5;UBERON:0002435,1.46e-09,5;UBERON:0000204,1.46e-09,5;UBERON:0010082,1.46e-09,5;UBERON:0002950,1.62e-08,4;UBERON:0001891,1.62e-08,4;UBERON:0009616,1.62e-08,4;UBERON:0010286,1.62e-08,4;UBERON:0011216,2.59e-08,194;UBERON:0000483,2.69e-08,174;UBERON:0000119,4.21e-08,176;UBERON:0004733,2.02e-07,6;UBERON:0004732,2.02e-07,6;UBERON:0002028,2.02e-07,6;UBERON:0007277,2.02e-07,6;UBERON:0004684,2.79e-07,3;UBERON:0002275,2.79e-07,3 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14247797122848,0.878744730937887,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0,1.82084814773638,3.1739458756322,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0,0,3.42781181284564,5.52171352379034,0.367472397644862,0.862609239164127,0.919218786610021,3.30347642998166,7.66124028511126,6.91229399653096,1.05509030184155,1.37231465403614,2.08365348222704,2.79182999001381,3.37657566019008,3.97275444219706,3.24091444021034,4.41352210477219,2.98239113320481,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,7.63932260964596,12.8100168789215,4.64921102817598,5.04090528557602,6.64860189058859,13.0906468072523,9.40999325792994,0,0,0,0.210441855886474,0.130120442962704,0.229902104433473,0.720248519221397,0.753524089178575,1.56483948048054,1.66547836370305,2.43624483855295,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,3.57492912559016,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0.221464689648775,0,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0,0,2.72936002979246,2.69586879162067,0,0.252470927204373,0,0,0,0,0,0,0,0,0,13.8168166061377,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0.709360934569094,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0.36630324853453,0,0,6.7770221114048,2.30162618253588,5.72895513439397,4.64003592327956,7.53590771747707,6.0431511791176,4.05013500139084,4.05289082901798,5.89085131679466,3.10656187051092,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.367687016900028,0.222246727801615,0.618105171716683,0.64183841918363,0.252697211763798,0.25347929989024,0.565879024158229,0.561849044819294,0.384150914429216,0.34461281373368,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0,0,0,0.726732083161643,0.0941093804153306,0,0.365855945745545,0,0.679020569229309,0.561142271657738,0.593175090620871,0.492522411877817,0.409231043169689,0.309873682371932,0.192906610981141,0.499621155875892,0.701794825336225,0,0.191288332068843,0.220591419119515,0.231867835620421 | |phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14247797122848,0.878744730937887,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0,1.82084814773638,3.1739458756322,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0,0,3.42781181284564,5.52171352379034,0.367472397644862,0.862609239164127,0.919218786610021,3.30347642998166,7.66124028511126,6.91229399653096,1.05509030184155,1.37231465403614,2.08365348222704,2.79182999001381,3.37657566019008,3.97275444219706,3.24091444021034,4.41352210477219,2.98239113320481,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,7.63932260964596,12.8100168789215,4.64921102817598,5.04090528557602,6.64860189058859,13.0906468072523,9.40999325792994,0,0,0,0.210441855886474,0.130120442962704,0.229902104433473,0.720248519221397,0.753524089178575,1.56483948048054,1.66547836370305,2.43624483855295,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,3.57492912559016,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0.221464689648775,0,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0,0,2.72936002979246,2.69586879162067,0,0.252470927204373,0,0,0,0,0,0,0,0,0,13.8168166061377,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0.709360934569094,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0.36630324853453,0,0,6.7770221114048,2.30162618253588,5.72895513439397,4.64003592327956,7.53590771747707,6.0431511791176,4.05013500139084,4.05289082901798,5.89085131679466,3.10656187051092,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.367687016900028,0.222246727801615,0.618105171716683,0.64183841918363,0.252697211763798,0.25347929989024,0.565879024158229,0.561849044819294,0.384150914429216,0.34461281373368,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0,0,0,0.726732083161643,0.0941093804153306,0,0.365855945745545,0,0.679020569229309,0.561142271657738,0.593175090620871,0.492522411877817,0.409231043169689,0.309873682371932,0.192906610981141,0.499621155875892,0.701794825336225,0,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p3@Lrtm2 | |short_description=p3@Lrtm2 | ||
}} | }} |
Latest revision as of 13:20, 26 September 2015
Short description: | p3@Lrtm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lrtm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:251 |
Association with transcript: | 0bp_to_ENSMUST00000112756_5end |
EntrezGene: | Lrtm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.05e-18 | 23 |
neuroblast (sensu Vertebrata) | 3.05e-18 | 23 |
neuron | 1.55e-11 | 33 |
neuronal stem cell | 1.55e-11 | 33 |
neuroblast | 1.55e-11 | 33 |
electrically signaling cell | 1.55e-11 | 33 |
neural cell | 2.90e-09 | 43 |
electrically responsive cell | 3.47e-09 | 39 |
electrically active cell | 3.47e-09 | 39 |
ectodermal cell | 5.78e-09 | 44 |
neurectodermal cell | 5.78e-09 | 44 |
raphe nuclei neuron | 2.79e-07 | 3 |