Personal tools

FFCP PHASE1:Mm9::chr7:31936446..31936467,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=52857
|EntrezGene=52857
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=Q8VEF1,F8WJ74
|UniProt=Q8VEF1,F8WJ74
|association_with_transcript=-377bp_to_ENSMUST00000001280,ENSMUST00000085636,NM_027898,uc009gif.1,uc009gig.1_5end
|association_with_transcript=-377bp_to_ENSMUST00000001280,ENSMUST00000085636,NM_027898,uc009gif.1,uc009gig.1_5end
|cluster_id=chr7:31936446..31936467,-
|description=CAGE_peak_3_at_Gramd1a_5end
|description=CAGE_peak_3_at_Gramd1a_5end
|id=chr7:31936446..31936467,-
|id=chr7:31936446..31936467,-
|ontology_enrichment_celltype=CL:0000838!1.40e-09!12;CL:0000084!2.82e-09!11;CL:0000827!2.82e-09!11;CL:0000542!2.52e-08!13;CL:0000051!2.52e-08!13;CL:0000791!6.29e-08!9;CL:0000789!6.29e-08!9;CL:0002420!6.29e-08!9;CL:0002419!6.29e-08!9;CL:0000790!6.29e-08!9;CL:0000624!2.48e-07!8;CL:0000738!6.70e-07!17;CL:0002087!6.70e-07!17
|ontology_enrichment_celltype=CL:0000838!1.40e-09!12;CL:0000084!2.82e-09!11;CL:0000827!2.82e-09!11;CL:0000542!2.52e-08!13;CL:0000051!2.52e-08!13;CL:0000791!6.29e-08!9;CL:0000789!6.29e-08!9;CL:0002420!6.29e-08!9;CL:0002419!6.29e-08!9;CL:0000790!6.29e-08!9;CL:0000624!2.48e-07!8;CL:0000738!6.70e-07!17;CL:0002087!6.70e-07!17
|ontology_enrichment_celltype_v019_2=CL:0000084,6.42e-36,11;CL:0000827,6.42e-36,11;CL:0000838,9.28e-33,12;CL:0000542,4.39e-30,13;CL:0000051,4.39e-30,13;CL:0000791,6.72e-30,9;CL:0000789,6.72e-30,9;CL:0002420,6.72e-30,9;CL:0002419,6.72e-30,9;CL:0000790,6.72e-30,9;CL:0000624,3.00e-27,8;CL:0000738,1.58e-22,17;CL:0002087,1.58e-22,17;CL:0000893,6.62e-21,6;CL:0002489,6.62e-21,6;CL:0000898,6.62e-21,6;CL:0000809,6.62e-21,6;CL:0000810,6.62e-21,6;CL:0000895,6.62e-21,6;CL:0000808,6.62e-21,6;CL:0000894,6.62e-21,6;CL:0000806,6.62e-21,6;CL:0000807,6.62e-21,6;CL:0000805,6.62e-21,6;CL:0002425,6.62e-21,6;CL:0002436,6.62e-21,6;CL:0002427,6.62e-21,6;CL:0002428,6.62e-21,6;CL:0002429,6.62e-21,6;CL:0002433,6.62e-21,6;CL:0002431,6.62e-21,6;CL:0002432,6.62e-21,6;CL:0002031,1.16e-14,25;CL:0000034,3.03e-11,97;CL:0000988,5.26e-11,32;CL:0002032,5.26e-11,32;CL:0000037,5.26e-11,32;CL:0000837,5.26e-11,32;CL:0002613,3.14e-10,3;CL:0000723,1.75e-08,91;CL:0000048,1.75e-08,91;CL:0002320,4.86e-07,46;CL:0000134,4.86e-07,46
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!6.72e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000369,2.19e-16,5;UBERON:0002435,2.19e-16,5;UBERON:0000204,2.19e-16,5;UBERON:0010082,2.19e-16,5;UBERON:0002370,8.79e-11,23;UBERON:0000974,8.79e-11,23;UBERON:0004807,8.79e-11,23;UBERON:0005058,8.79e-11,23;UBERON:0003351,8.79e-11,23;UBERON:0009113,8.79e-11,23;UBERON:0003295,8.79e-11,23;UBERON:0009722,8.79e-11,23;UBERON:0005562,8.79e-11,23;UBERON:0007690,8.79e-11,23;UBERON:0006562,2.86e-10,24;UBERON:0003408,2.86e-10,24;UBERON:0001557,2.86e-10,24;UBERON:0001042,2.86e-10,24;UBERON:0008814,2.86e-10,24;UBERON:0009145,2.86e-10,24;UBERON:0002420,3.67e-10,8;UBERON:0007245,3.67e-10,8;UBERON:0010009,3.67e-10,8;UBERON:0010011,3.67e-10,8;UBERON:0000454,3.67e-10,8;UBERON:0000072,5.83e-09,27;UBERON:0004177,3.08e-08,29;UBERON:0005057,3.08e-08,29;UBERON:0002384,4.86e-07,46
|phase1_expression=0,0,0,0,0,0,0,2.06597317506522,6.47628121897667,7.95819389494778,1.36974374580404,2.39316476986009,1.19840510951844,2.27293046289393,0,0,0,0.157731082679119,0,0.42438965179803,0.255129870453209,1.19149141441062,1.56719873483361,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0.418531630736908,0,0,2.35292595212406,0.683045484958446,0.485510353031154,0.125896817975577,0.101376931219515,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0.419959264876088,0,0.503347818173209,1.45072428402269,1.00828139742739,0,0,0,0.809265843438391,0.528990979272033,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.622137673850866,1.21505344498522,0.210324961351382,0.856952953211411,0,0.61245399607477,0.862609239164127,1.83843757322004,0,0.255374676170375,0,1.31886287730194,1.00636407962651,1.56274011167028,0,0.56276261003168,0.15279824777681,1.17851434189467,0.284743361598206,0.745597783301202,0,0.151143120213571,0.869593466105033,0,0,0,0,0,0.140444420131752,0.340860645156116,0.519572009205738,0,0,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0.173485326766136,0,0.461230994512117,0.150722640552623,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0.209446706813455,0.255457055208591,0.479260498023681,0,0.889491589511453,0.149790639404823,1.37250180845588,1.88481528169297,0.347648640384553,0,0.83115217823824,0,0.101839363850316,0.248813941220186,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.468508622798644,0,0.215567992932842,0.567318240503458,0.879755620819744,0,0.556094498451196,0,0.61734640922383,0.59710280045548,0,0.51469581422943,0.568326998791185,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0.465067889500816,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,0.210289948564127,0.308713837137853,0,0,0,0.464473343720877,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0,0.470996183524124,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0.238043640886014,0.390267295715598,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0.54390568381871,0,0,0.481651769963376,0,0,0,0.315508219416257,0,0.861693590931196,0,0.445597348164788,0.566153061577665,0.404810701674894,0,0.395287777946524,0.321321316421807,0.141940085208269,0,0,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0.540183282093931,0.258717367565509,0,0,0.535106452806212,0.493647061806363,0.913394847343798,0,0,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,0,0,0.341741761595705,0.619160603889667,0.370389054739423,0.188368457004691,0,0.228778173206523,1.18984900995699,1.39951452323658,1.10559979043539,0,0.316335993581135,0.406638934253697,0.432021363287205,0.209088296014469,0,0.269728692769641,0,0,0,0,0,0,0.330916980914195,0.194451188344048,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0.405450430580328,0.308132871494482,0,1.07416017400489,0.79472541912506,0.240390899039938,0.590758108698309,0.706765149637033,0.457240839929999,0.907435666231565,0.38983152295901,1.25075394132428,2.68816875017609,0,0,0.269141569828427,0.167884616364078,0.19318959403219,0,0.183151624267265,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.512200817262403,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0.64183841918363,0.758091635291392,0.50695859978048,0.565879024158229,0.187283014939765,0.256100609619477,0.287177344778066,0,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0.409231043169689,0.464810523557898,0,0.249810577937946,0,0.214871054048298,0.382576664137687,0,0
|phase1_expression=0,0,0,0,0,0,0,2.06597317506522,6.47628121897667,7.95819389494778,1.36974374580404,2.39316476986009,1.19840510951844,2.27293046289393,0,0,0,0.157731082679119,0,0.42438965179803,0.255129870453209,1.19149141441062,1.56719873483361,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0.418531630736908,0,0,2.35292595212406,0.683045484958446,0.485510353031154,0.125896817975577,0.101376931219515,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0.419959264876088,0,0.503347818173209,1.45072428402269,1.00828139742739,0,0,0,0.809265843438391,0.528990979272033,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.622137673850866,1.21505344498522,0.210324961351382,0.856952953211411,0,0.61245399607477,0.862609239164127,1.83843757322004,0,0.255374676170375,0,1.31886287730194,1.00636407962651,1.56274011167028,0,0.56276261003168,0.15279824777681,1.17851434189467,0.284743361598206,0.745597783301202,0,0.151143120213571,0.869593466105033,0,0,0,0,0,0.140444420131752,0.340860645156116,0.519572009205738,0,0,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0.173485326766136,0,0.461230994512117,0.150722640552623,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0.209446706813455,0.255457055208591,0.479260498023681,0,0.889491589511453,0.149790639404823,1.37250180845588,1.88481528169297,0.347648640384553,0,0.83115217823824,0,0.101839363850316,0.248813941220186,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.468508622798644,0,0.215567992932842,0.567318240503458,0.879755620819744,0,0.556094498451196,0,0.61734640922383,0.59710280045548,0,0.51469581422943,0.568326998791185,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0.465067889500816,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,0.210289948564127,0.308713837137853,0,0,0,0.464473343720877,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0,0.470996183524124,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0.238043640886014,0.390267295715598,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0.54390568381871,0,0,0.481651769963376,0,0,0,0.315508219416257,0,0.861693590931196,0,0.445597348164788,0.566153061577665,0.404810701674894,0,0.395287777946524,0.321321316421807,0.141940085208269,0,0,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0.540183282093931,0.258717367565509,0,0,0.535106452806212,0.493647061806363,0.913394847343798,0,0,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,0,0,0.341741761595705,0.619160603889667,0.370389054739423,0.188368457004691,0,0.228778173206523,1.18984900995699,1.39951452323658,1.10559979043539,0,0.316335993581135,0.406638934253697,0.432021363287205,0.209088296014469,0,0.269728692769641,0,0,0,0,0,0,0.330916980914195,0.194451188344048,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0.405450430580328,0.308132871494482,0,1.07416017400489,0.79472541912506,0.240390899039938,0.590758108698309,0.706765149637033,0.457240839929999,0.907435666231565,0.38983152295901,1.25075394132428,2.68816875017609,0,0,0.269141569828427,0.167884616364078,0.19318959403219,0,0.183151624267265,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.512200817262403,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0.64183841918363,0.758091635291392,0.50695859978048,0.565879024158229,0.187283014939765,0.256100609619477,0.287177344778066,0,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0.409231043169689,0.464810523557898,0,0.249810577937946,0,0.214871054048298,0.382576664137687,0,0
|short_description=p3@Gramd1a
|short_description=p3@Gramd1a
}}
}}

Latest revision as of 15:49, 26 September 2015

Short description:p3@Gramd1a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Gramd1a_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: -377bp_to_ENSMUST00000001280, ENSMUST00000085636, NM_027898, uc009gif.1, uc009gig.1_5end
EntrezGene:Gramd1a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Gramd1a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.48
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.27
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G22.69
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
T cell6.42e-3611
pro-T cell6.42e-3611
lymphoid lineage restricted progenitor cell9.28e-3312
lymphocyte4.39e-3013
common lymphoid progenitor4.39e-3013
mature alpha-beta T cell6.72e-309
alpha-beta T cell6.72e-309
immature T cell6.72e-309
mature T cell6.72e-309
immature alpha-beta T cell6.72e-309
CD4-positive, alpha-beta T cell3.00e-278
leukocyte1.58e-2217
nongranular leukocyte1.58e-2217
thymocyte6.62e-216
double negative thymocyte6.62e-216
naive T cell6.62e-216
double-positive, alpha-beta thymocyte6.62e-216
CD4-positive, alpha-beta thymocyte6.62e-216
naive thymus-derived CD4-positive, alpha-beta T cell6.62e-216
DN4 thymocyte6.62e-216
DN1 thymic pro-T cell6.62e-216
DN2 thymocyte6.62e-216
DN3 thymocyte6.62e-216
immature single positive thymocyte6.62e-216
early T lineage precursor6.62e-216
mature CD4 single-positive thymocyte6.62e-216
resting double-positive thymocyte6.62e-216
double-positive blast6.62e-216
CD69-positive double-positive thymocyte6.62e-216
CD69-positive, CD4-positive single-positive thymocyte6.62e-216
CD4-positive, CD8-intermediate double-positive thymocyte6.62e-216
CD24-positive, CD4 single-positive thymocyte6.62e-216
hematopoietic lineage restricted progenitor cell1.16e-1425
stem cell3.03e-1197
hematopoietic cell5.26e-1132
hematopoietic oligopotent progenitor cell5.26e-1132
hematopoietic stem cell5.26e-1132
hematopoietic multipotent progenitor cell5.26e-1132
striatum neuron3.14e-103
somatic stem cell1.75e-0891
multi fate stem cell1.75e-0891
connective tissue cell4.86e-0746
mesenchymal cell4.86e-0746

Uber anatomy
Ontology termp-valuen
corpus striatum2.19e-165
striatum2.19e-165
ventral part of telencephalon2.19e-165
future corpus striatum2.19e-165
thymus8.79e-1123
neck8.79e-1123
respiratory system epithelium8.79e-1123
hemolymphoid system gland8.79e-1123
pharyngeal epithelium8.79e-1123
thymic region8.79e-1123
pharyngeal gland8.79e-1123
entire pharyngeal arch endoderm8.79e-1123
thymus primordium8.79e-1123
early pharyngeal endoderm8.79e-1123
pharynx2.86e-1024
gland of gut2.86e-1024
upper respiratory tract2.86e-1024
chordate pharynx2.86e-1024
pharyngeal arch system2.86e-1024
pharyngeal region of foregut2.86e-1024
basal ganglion3.67e-108
nuclear complex of neuraxis3.67e-108
aggregate regional part of brain3.67e-108
collection of basal ganglia3.67e-108
cerebral subcortex3.67e-108
segment of respiratory tract5.83e-0927
hemopoietic organ3.08e-0829
immune organ3.08e-0829
connective tissue4.86e-0746
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:31936446..31936467,-&oldid=4261485"