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FFCP PHASE1:Mm9::chr7:51565560..51565575,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=243961
|EntrezGene=243961
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=D3YZU1
|UniProt=D3YZU1
|association_with_transcript=-47bp_to_ENSMUST00000107938_5end
|association_with_transcript=-47bp_to_ENSMUST00000107938_5end
|cluster_id=chr7:51565560..51565575,+
|description=CAGE_peak_3_at_Shank1_5end
|description=CAGE_peak_3_at_Shank1_5end
|id=chr7:51565560..51565575,+
|id=chr7:51565560..51565575,+
|ontology_enrichment_celltype=CL:0000117!1.43e-16!23;CL:0000337!1.43e-16!23;CL:0000540!2.14e-08!33;CL:0000047!2.14e-08!33;CL:0000031!2.14e-08!33;CL:0000404!2.14e-08!33
|ontology_enrichment_celltype=CL:0000117!1.43e-16!23;CL:0000337!1.43e-16!23;CL:0000540!2.14e-08!33;CL:0000047!2.14e-08!33;CL:0000031!2.14e-08!33;CL:0000404!2.14e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.29e-31,23;CL:0000337,2.29e-31,23;CL:0000540,7.89e-20,33;CL:0000047,7.89e-20,33;CL:0000031,7.89e-20,33;CL:0000404,7.89e-20,33;CL:0000393,8.89e-16,39;CL:0000211,8.89e-16,39;CL:0002319,1.02e-13,43;CL:0000221,2.91e-13,44;CL:0000133,2.91e-13,44;CL:0002609,5.58e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.20e-22!52;UBERON:0005068!1.20e-22!52;UBERON:0006241!1.20e-22!52;UBERON:0007135!1.20e-22!52;UBERON:0002020!4.42e-22!34;UBERON:0000955!2.31e-21!50;UBERON:0006238!2.31e-21!50;UBERON:0002616!1.41e-20!49;UBERON:0000033!4.14e-19!63;UBERON:0002791!3.44e-18!29;UBERON:0003528!3.44e-18!29;UBERON:0001893!3.44e-18!29;UBERON:0001017!5.33e-18!73;UBERON:0005743!5.33e-18!73;UBERON:0002346!8.73e-18!71;UBERON:0003075!8.73e-18!71;UBERON:0007284!8.73e-18!71;UBERON:0003080!2.17e-17!40;UBERON:0000073!6.46e-17!75;UBERON:0001016!6.46e-17!75;UBERON:0003056!9.71e-17!49;UBERON:0002780!9.74e-17!39;UBERON:0001890!9.74e-17!39;UBERON:0006240!9.74e-17!39;UBERON:0004121!1.67e-13!102;UBERON:0000924!1.67e-13!102;UBERON:0006601!1.67e-13!102;UBERON:0000956!1.09e-12!21;UBERON:0001869!1.09e-12!21;UBERON:0000203!1.09e-12!21;UBERON:0007811!9.77e-11!86;UBERON:0000153!2.63e-10!94;UBERON:0002619!3.25e-10!17;UBERON:0002021!1.92e-09!10;UBERON:0000411!1.92e-09!10;UBERON:0001950!1.92e-09!10;UBERON:0002420!9.49e-07!8;UBERON:0007245!9.49e-07!8;UBERON:0010009!9.49e-07!8;UBERON:0010011!9.49e-07!8;UBERON:0000454!9.49e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.20e-44,34;UBERON:0000073,1.39e-43,54;UBERON:0001049,4.84e-40,52;UBERON:0005068,4.84e-40,52;UBERON:0006241,4.84e-40,52;UBERON:0007135,4.84e-40,52;UBERON:0001017,2.18e-38,73;UBERON:0001016,4.89e-37,75;UBERON:0003528,4.71e-36,29;UBERON:0002791,4.71e-36,29;UBERON:0001893,4.71e-36,29;UBERON:0000955,5.37e-33,47;UBERON:0006238,5.37e-33,47;UBERON:0002616,1.60e-31,46;UBERON:0002346,1.81e-30,64;UBERON:0003075,1.81e-30,64;UBERON:0007284,1.81e-30,64;UBERON:0003080,1.96e-30,40;UBERON:0002780,3.69e-29,39;UBERON:0001890,3.69e-29,39;UBERON:0006240,3.69e-29,39;UBERON:0004121,1.16e-26,95;UBERON:0000924,1.16e-26,95;UBERON:0006601,1.16e-26,95;UBERON:0010371,2.30e-25,73;UBERON:0000956,5.03e-25,21;UBERON:0001869,5.03e-25,21;UBERON:0000203,5.03e-25,21;UBERON:0003056,3.21e-23,49;UBERON:0002619,4.43e-20,17;UBERON:0010314,6.77e-18,92;UBERON:0002021,3.46e-17,10;UBERON:0000411,3.46e-17,10;UBERON:0001950,3.46e-17,10;UBERON:0000025,2.08e-12,114;UBERON:0002420,7.33e-12,8;UBERON:0007245,7.33e-12,8;UBERON:0010009,7.33e-12,8;UBERON:0010011,7.33e-12,8;UBERON:0000454,7.33e-12,8;UBERON:0004111,6.42e-11,122;UBERON:0002240,1.14e-09,6;UBERON:0005174,1.14e-09,6;UBERON:0001137,1.14e-09,6;UBERON:0003076,1.54e-09,12;UBERON:0003057,1.54e-09,12;UBERON:0001948,1.10e-08,5;UBERON:0002315,1.10e-08,5;UBERON:0000369,7.81e-08,5;UBERON:0002435,7.81e-08,5;UBERON:0000204,7.81e-08,5;UBERON:0010082,7.81e-08,5;UBERON:0011216,5.68e-07,194;UBERON:0002950,8.34e-07,4;UBERON:0001891,8.34e-07,4;UBERON:0009616,8.34e-07,4;UBERON:0010286,8.34e-07,4
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.685572168028694,0,3.40173160604279,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,4.65327859977075,2.64495489636016,3.1691570175309,0,0,0,0,0,0,0,2.69592992002042,2.02508907497536,3.15487442027073,7.9982275633065,7.28866185140325,1.5923803897944,4.02550978276593,2.75765635983006,3.30347642998166,16.0886045987337,13.3637683932932,3.69281605644543,7.77644970620482,5.2091337055676,6.14202597803038,5.06486349028512,7.63991238884051,9.72274332063103,8.11518580554887,5.59198337475902,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0.323533699894818,0.220841518460394,0,0,3.22058876712702,7.74952815209784,0.255457055208591,0,0,0,4.19413790333504,3.20250421973039,5.02617408451458,12.5153510538439,17.6443665557928,4.98691306942944,6.16516799657479,0.407357455401265,0,0,0,0.260240885925407,0,0.180062129805349,0.753524089178575,0.680364991513279,0.512454881139399,0.562210347358373,0,0,0.378212160335639,0.879755620819744,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0.617068451549513,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0,0,0,0,13.4585567081041,4.83651678182637,0,0,0.639864751605702,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,1.1270773567308,0,0.387904974335251,0.140271639780637,0.189709611372772,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0,0,0,0,0,0,0,0.963303539926752,4.10240903072711,0,0,0,0,0,0,0,0,0,0,0,8.35435422696698,0,0.178065603667255,0.488660878060728,0,1.32745138339963,0,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0.709360934569094,0.178368817602071,0.493647061806363,0.608929898229199,0,0,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0,0,1.66882771809459,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0.790839983952838,0.813277868507395,0.432021363287205,0.418176592028937,0,0.269728692769641,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0,0,0,0,0,0,0,0,0.405450430580328,0.205421914329655,0.25984164595559,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,12.4245405375755,5.52390283808612,9.73922372846974,10.4830441229649,11.6464028361009,15.107877947794,14.1754725048679,9.00642406448441,13.5942722695261,11.9084871702919,0.103787347584177,0,0.512200817262403,0.243106717068294,1.46729213839588,1.10306105070008,0.222246727801615,0.206035057238894,0,1.01078884705519,0.25347929989024,0.565879024158229,0.749132059759059,0.768301828858431,1.09127391015665,0.952587382566147,1.27472758539341,1.15745532278223,0.824171801606613,0.883193520806384,0,0.887379030796687,0.953744759789284,0.581385666529314,0.564656282491984,1.01537529470012,0.548783918618318,0,0.407412341537585,0.561142271657738,0.355905054372522,0.689531376628944,0.409231043169689,0.619747364743864,1.15743966588685,1.24905288968973,0.935726433781634,0.644613162144895,0.382576664137687,0.220591419119515,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.685572168028694,0,3.40173160604279,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,4.65327859977075,2.64495489636016,3.1691570175309,0,0,0,0,0,0,0,2.69592992002042,2.02508907497536,3.15487442027073,7.9982275633065,7.28866185140325,1.5923803897944,4.02550978276593,2.75765635983006,3.30347642998166,16.0886045987337,13.3637683932932,3.69281605644543,7.77644970620482,5.2091337055676,6.14202597803038,5.06486349028512,7.63991238884051,9.72274332063103,8.11518580554887,5.59198337475902,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0.323533699894818,0.220841518460394,0,0,3.22058876712702,7.74952815209784,0.255457055208591,0,0,0,4.19413790333504,3.20250421973039,5.02617408451458,12.5153510538439,17.6443665557928,4.98691306942944,6.16516799657479,0.407357455401265,0,0,0,0.260240885925407,0,0.180062129805349,0.753524089178575,0.680364991513279,0.512454881139399,0.562210347358373,0,0,0.378212160335639,0.879755620819744,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0.617068451549513,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0,0,0,0,13.4585567081041,4.83651678182637,0,0,0.639864751605702,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,1.1270773567308,0,0.387904974335251,0.140271639780637,0.189709611372772,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0,0,0,0,0,0,0,0.963303539926752,4.10240903072711,0,0,0,0,0,0,0,0,0,0,0,8.35435422696698,0,0.178065603667255,0.488660878060728,0,1.32745138339963,0,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0.709360934569094,0.178368817602071,0.493647061806363,0.608929898229199,0,0,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0,0,1.66882771809459,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0.790839983952838,0.813277868507395,0.432021363287205,0.418176592028937,0,0.269728692769641,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0,0,0,0,0,0,0,0,0.405450430580328,0.205421914329655,0.25984164595559,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,12.4245405375755,5.52390283808612,9.73922372846974,10.4830441229649,11.6464028361009,15.107877947794,14.1754725048679,9.00642406448441,13.5942722695261,11.9084871702919,0.103787347584177,0,0.512200817262403,0.243106717068294,1.46729213839588,1.10306105070008,0.222246727801615,0.206035057238894,0,1.01078884705519,0.25347929989024,0.565879024158229,0.749132059759059,0.768301828858431,1.09127391015665,0.952587382566147,1.27472758539341,1.15745532278223,0.824171801606613,0.883193520806384,0,0.887379030796687,0.953744759789284,0.581385666529314,0.564656282491984,1.01537529470012,0.548783918618318,0,0.407412341537585,0.561142271657738,0.355905054372522,0.689531376628944,0.409231043169689,0.619747364743864,1.15743966588685,1.24905288968973,0.935726433781634,0.644613162144895,0.382576664137687,0.220591419119515,0.231867835620421
|short_description=p3@Shank1
|short_description=p3@Shank1
}}
}}

Latest revision as of 19:06, 26 September 2015

Short description:p3@Shank1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Shank1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -47bp_to_ENSMUST00000107938_5end
EntrezGene:Shank1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Shank1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.29
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.36
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.69
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.78
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.64
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.72
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.59
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I27.75
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F15.03
cortex, adult.CNhs10473.12-14D512.52
cortex, neonate N30.CNhs11107.1392-42F217.64
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B26.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E813.46
hippocampus, neonate N00.CNhs11228.627-43G14.84
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A34.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I98.35
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.48
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.59
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.91
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter7.20e-4434
regional part of nervous system1.39e-4354
neural tube4.84e-4052
neural rod4.84e-4052
future spinal cord4.84e-4052
neural keel4.84e-4052
central nervous system2.18e-3873
nervous system4.89e-3775
brain grey matter4.71e-3629
regional part of telencephalon4.71e-3629
telencephalon4.71e-3629
brain5.37e-3347
future brain5.37e-3347
regional part of brain1.60e-3146
neurectoderm1.81e-3064
neural plate1.81e-3064
presumptive neural plate1.81e-3064
anterior neural tube1.96e-3040
regional part of forebrain3.69e-2939
forebrain3.69e-2939
future forebrain3.69e-2939
ectoderm-derived structure1.16e-2695
ectoderm1.16e-2695
presumptive ectoderm1.16e-2695
ecto-epithelium2.30e-2573
cerebral cortex5.03e-2521
cerebral hemisphere5.03e-2521
pallium5.03e-2521
pre-chordal neural plate3.21e-2349
regional part of cerebral cortex4.43e-2017
structure with developmental contribution from neural crest6.77e-1892
occipital lobe3.46e-1710
visual cortex3.46e-1710
neocortex3.46e-1710
tube2.08e-12114
basal ganglion7.33e-128
nuclear complex of neuraxis7.33e-128
aggregate regional part of brain7.33e-128
collection of basal ganglia7.33e-128
cerebral subcortex7.33e-128
anatomical conduit6.42e-11122
spinal cord1.14e-096
dorsal region element1.14e-096
dorsum1.14e-096
posterior neural tube1.54e-0912
chordal neural plate1.54e-0912
regional part of spinal cord1.10e-085
gray matter of spinal cord1.10e-085
corpus striatum7.81e-085
striatum7.81e-085
ventral part of telencephalon7.81e-085
future corpus striatum7.81e-085
organ system subdivision5.68e-07194
regional part of midbrain8.34e-074
midbrain8.34e-074
presumptive midbrain8.34e-074
midbrain neural tube8.34e-074
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