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FFCP PHASE1:Mm9::chr4:33397365..33397378,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=24018
|EntrezGene=24018
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=Q3TUK6
|UniProt=Q3TUK6
|association_with_transcript=46bp_to_ENSMUST00000165807_5end
|association_with_transcript=46bp_to_ENSMUST00000165807_5end
|cluster_id=chr4:33397365..33397378,+
|description=CAGE_peak_2_at_Rngtt_5end
|description=CAGE_peak_2_at_Rngtt_5end
|id=chr4:33397365..33397378,+
|id=chr4:33397365..33397378,+
|ontology_enrichment_celltype=CL:0000988!1.67e-07!32;CL:0002032!1.67e-07!32;CL:0000037!1.67e-07!32;CL:0000566!1.67e-07!32;CL:0000837!1.67e-07!32
|ontology_enrichment_celltype=CL:0000988!1.67e-07!32;CL:0002032!1.67e-07!32;CL:0000037!1.67e-07!32;CL:0000566!1.67e-07!32;CL:0000837!1.67e-07!32
|ontology_enrichment_celltype_v019_2=CL:0000791,3.42e-14,9;CL:0000789,3.42e-14,9;CL:0002420,3.42e-14,9;CL:0002419,3.42e-14,9;CL:0000790,3.42e-14,9;CL:0000838,1.86e-13,12;CL:0000542,2.61e-12,13;CL:0000051,2.61e-12,13;CL:0000624,8.62e-12,8;CL:0000084,2.07e-11,11;CL:0000827,2.07e-11,11;CL:0000988,4.07e-11,32;CL:0002032,4.07e-11,32;CL:0000037,4.07e-11,32;CL:0000837,4.07e-11,32;CL:0000738,4.46e-09,17;CL:0002087,4.46e-09,17;CL:0002320,3.20e-08,46;CL:0000134,3.20e-08,46;CL:0000893,1.52e-07,6;CL:0002489,1.52e-07,6;CL:0000898,1.52e-07,6;CL:0000809,1.52e-07,6;CL:0000810,1.52e-07,6;CL:0000895,1.52e-07,6;CL:0000808,1.52e-07,6;CL:0000894,1.52e-07,6;CL:0000806,1.52e-07,6;CL:0000807,1.52e-07,6;CL:0000805,1.52e-07,6;CL:0002425,1.52e-07,6;CL:0002436,1.52e-07,6;CL:0002427,1.52e-07,6;CL:0002428,1.52e-07,6;CL:0002429,1.52e-07,6;CL:0002433,1.52e-07,6;CL:0002431,1.52e-07,6;CL:0002432,1.52e-07,6;CL:0002031,3.91e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!1.49e-09!29;UBERON:0002193!2.95e-09!48;UBERON:0002390!1.69e-08!45;UBERON:0003061!1.69e-08!45;UBERON:0002370!2.29e-07!23;UBERON:0000974!2.29e-07!23;UBERON:0004807!2.29e-07!23;UBERON:0005058!2.29e-07!23;UBERON:0003351!2.29e-07!23;UBERON:0009113!2.29e-07!23;UBERON:0003295!2.29e-07!23;UBERON:0009722!2.29e-07!23;UBERON:0005562!2.29e-07!23;UBERON:0007690!2.29e-07!23
|ontology_enrichment_uberon=UBERON:0004177!1.49e-09!29;UBERON:0002193!2.95e-09!48;UBERON:0002390!1.69e-08!45;UBERON:0003061!1.69e-08!45;UBERON:0002370!2.29e-07!23;UBERON:0000974!2.29e-07!23;UBERON:0004807!2.29e-07!23;UBERON:0005058!2.29e-07!23;UBERON:0003351!2.29e-07!23;UBERON:0009113!2.29e-07!23;UBERON:0003295!2.29e-07!23;UBERON:0009722!2.29e-07!23;UBERON:0005562!2.29e-07!23;UBERON:0007690!2.29e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.84e-13,23;UBERON:0000974,3.84e-13,23;UBERON:0004807,3.84e-13,23;UBERON:0005058,3.84e-13,23;UBERON:0003351,3.84e-13,23;UBERON:0009113,3.84e-13,23;UBERON:0003295,3.84e-13,23;UBERON:0009722,3.84e-13,23;UBERON:0005562,3.84e-13,23;UBERON:0007690,3.84e-13,23;UBERON:0006562,1.72e-12,24;UBERON:0003408,1.72e-12,24;UBERON:0001557,1.72e-12,24;UBERON:0001042,1.72e-12,24;UBERON:0008814,1.72e-12,24;UBERON:0009145,1.72e-12,24;UBERON:0000072,7.93e-11,27;UBERON:0004177,6.53e-10,29;UBERON:0005057,6.53e-10,29;UBERON:0000077,2.02e-09,35;UBERON:0003929,2.54e-08,55;UBERON:0002384,3.20e-08,46;UBERON:0002390,9.34e-08,45;UBERON:0003061,9.34e-08,45;UBERON:0007811,1.62e-07,36;UBERON:0002193,4.30e-07,48;UBERON:0002405,4.30e-07,48
|phase1_expression=0,1.39590163055744,2.27499619694768,1.81478526784098,0.500895729946347,0.33575854382378,0.700837921786577,1.29123323441576,18.3025338797167,18.7251621057595,0.34243593645101,0.239316476986009,1.71200729931206,1.31130603628496,0.333109761815663,0.404950534779652,0.699561878128147,0.157731082679119,0.411343300817216,0,0,0.397163804803541,0,0.319984845586813,0.68822784320151,1.72269589234506,0.430761996159075,0.430942465371778,0.190023419456374,0,0.443461021310609,0,1.23012957516914,0,0.288851619751275,0.166234645358492,0.612508068787107,0.837063261473815,0.7813353445238,0.523523743973798,1.76469446409304,1.36609096991689,1.45653105909346,0,0,0,0,0,0,0,0,0,1.67782606057736,4.35217285206807,3.02484419228218,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.311068836925433,0,0,0,0,0.367472397644862,0.191690942036473,0,0,0,0.153606533256243,0.263772575460388,0.0914876436024097,0.52091337055676,0,0,0,0,0,0,0.151452386666368,0.302286240427142,2.89864488701678,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0.520455980298408,0.608930956624282,0.461230994512117,0.452167921657868,0.352766121407114,0,0,0,0,0.323533699894818,0,1.45462575940567,0,0,0,0,1.31796636956512,2.39961092397363,0.762421362438388,0,0,0,0,0,0,0,0.305518091550949,0,0,0,0.650602214813519,0.229902104433473,0,0.30140963567143,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0.219195732427575,0,0,0,0,1.40442637462647,1.02939162845886,0.852490498186778,0.621377317606506,0.234526059981096,0,0,0,0,0.232533944750408,0,0.350296027101508,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0.264450566663544,0.213288250535234,0,0,0,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0.379335801906163,0.114248512609729,0,0,0,0,0.126473074248515,0,0.31399745568275,0.370191491765402,0.296452627087149,0.667380422864376,0.393117990226406,0,0.405720242777006,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0.54390568381871,0,0,0.160550589987792,0.117211686592203,0.163934945376675,0,0.631016438832513,0,0.861693590931196,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.876767573733936,0,0,0,0.178065603667255,0.325773918707152,0,0,0.485561272309963,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0.18542530201051,0.683483523191411,0.412773735926445,0.555583582109135,0.565105371014073,0.410082683163076,0.457556346413045,1.18984900995699,2.23922323717853,1.24379976423981,0,0.316335993581135,0.406638934253697,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0.448549638131936,0.165458490457098,0.194451188344048,0.516639293910924,0.168956125490778,0.58678619322877,0.781226309063701,2.51662426621706,1.20792060413003,1.44015003128933,0.948033361884535,0,0.205421914329655,1.03936658382236,0.358053391334963,0.993406773906324,1.08175904567972,0.590758108698309,1.11063094942962,1.5241361331,1.31074040677893,1.46186821109629,1.15454209968395,1.28564592399726,0,0.443971906748129,0.538283139656854,0.671538465456314,0,0,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0,0.419226325255965,0,0.222246727801615,0,0,0,0.25347929989024,0,0,0.128050304809739,0.229741875822453,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0,0.231867835620421
|phase1_expression=0,1.39590163055744,2.27499619694768,1.81478526784098,0.500895729946347,0.33575854382378,0.700837921786577,1.29123323441576,18.3025338797167,18.7251621057595,0.34243593645101,0.239316476986009,1.71200729931206,1.31130603628496,0.333109761815663,0.404950534779652,0.699561878128147,0.157731082679119,0.411343300817216,0,0,0.397163804803541,0,0.319984845586813,0.68822784320151,1.72269589234506,0.430761996159075,0.430942465371778,0.190023419456374,0,0.443461021310609,0,1.23012957516914,0,0.288851619751275,0.166234645358492,0.612508068787107,0.837063261473815,0.7813353445238,0.523523743973798,1.76469446409304,1.36609096991689,1.45653105909346,0,0,0,0,0,0,0,0,0,1.67782606057736,4.35217285206807,3.02484419228218,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.311068836925433,0,0,0,0,0.367472397644862,0.191690942036473,0,0,0,0.153606533256243,0.263772575460388,0.0914876436024097,0.52091337055676,0,0,0,0,0,0,0.151452386666368,0.302286240427142,2.89864488701678,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0.520455980298408,0.608930956624282,0.461230994512117,0.452167921657868,0.352766121407114,0,0,0,0,0.323533699894818,0,1.45462575940567,0,0,0,0,1.31796636956512,2.39961092397363,0.762421362438388,0,0,0,0,0,0,0,0.305518091550949,0,0,0,0.650602214813519,0.229902104433473,0,0.30140963567143,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0.219195732427575,0,0,0,0,1.40442637462647,1.02939162845886,0.852490498186778,0.621377317606506,0.234526059981096,0,0,0,0,0.232533944750408,0,0.350296027101508,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0.264450566663544,0.213288250535234,0,0,0,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0.379335801906163,0.114248512609729,0,0,0,0,0.126473074248515,0,0.31399745568275,0.370191491765402,0.296452627087149,0.667380422864376,0.393117990226406,0,0.405720242777006,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0.54390568381871,0,0,0.160550589987792,0.117211686592203,0.163934945376675,0,0.631016438832513,0,0.861693590931196,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.876767573733936,0,0,0,0.178065603667255,0.325773918707152,0,0,0.485561272309963,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0.18542530201051,0.683483523191411,0.412773735926445,0.555583582109135,0.565105371014073,0.410082683163076,0.457556346413045,1.18984900995699,2.23922323717853,1.24379976423981,0,0.316335993581135,0.406638934253697,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0.448549638131936,0.165458490457098,0.194451188344048,0.516639293910924,0.168956125490778,0.58678619322877,0.781226309063701,2.51662426621706,1.20792060413003,1.44015003128933,0.948033361884535,0,0.205421914329655,1.03936658382236,0.358053391334963,0.993406773906324,1.08175904567972,0.590758108698309,1.11063094942962,1.5241361331,1.31074040677893,1.46186821109629,1.15454209968395,1.28564592399726,0,0.443971906748129,0.538283139656854,0.671538465456314,0,0,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0,0.419226325255965,0,0.222246727801615,0,0,0,0.25347929989024,0,0,0.128050304809739,0.229741875822453,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0,0.231867835620421
|short_description=p2@Rngtt
|short_description=p2@Rngtt
}}
}}

Latest revision as of 22:14, 26 September 2015

Short description:p2@Rngtt
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rngtt_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 46bp_to_ENSMUST00000165807_5end
EntrezGene:Rngtt
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rngtt

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E718.30
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F218.73
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D92.52
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell3.42e-149
alpha-beta T cell3.42e-149
immature T cell3.42e-149
mature T cell3.42e-149
immature alpha-beta T cell3.42e-149
lymphoid lineage restricted progenitor cell1.86e-1312
lymphocyte2.61e-1213
common lymphoid progenitor2.61e-1213
CD4-positive, alpha-beta T cell8.62e-128
T cell2.07e-1111
pro-T cell2.07e-1111
hematopoietic cell4.07e-1132
hematopoietic oligopotent progenitor cell4.07e-1132
hematopoietic stem cell4.07e-1132
hematopoietic multipotent progenitor cell4.07e-1132
leukocyte4.46e-0917
nongranular leukocyte4.46e-0917
connective tissue cell3.20e-0846
mesenchymal cell3.20e-0846
thymocyte1.52e-076
double negative thymocyte1.52e-076
naive T cell1.52e-076
double-positive, alpha-beta thymocyte1.52e-076
CD4-positive, alpha-beta thymocyte1.52e-076
naive thymus-derived CD4-positive, alpha-beta T cell1.52e-076
DN4 thymocyte1.52e-076
DN1 thymic pro-T cell1.52e-076
DN2 thymocyte1.52e-076
DN3 thymocyte1.52e-076
immature single positive thymocyte1.52e-076
early T lineage precursor1.52e-076
mature CD4 single-positive thymocyte1.52e-076
resting double-positive thymocyte1.52e-076
double-positive blast1.52e-076
CD69-positive double-positive thymocyte1.52e-076
CD69-positive, CD4-positive single-positive thymocyte1.52e-076
CD4-positive, CD8-intermediate double-positive thymocyte1.52e-076
CD24-positive, CD4 single-positive thymocyte1.52e-076
hematopoietic lineage restricted progenitor cell3.91e-0725

Uber anatomy
Ontology termp-valuen
thymus3.84e-1323
neck3.84e-1323
respiratory system epithelium3.84e-1323
hemolymphoid system gland3.84e-1323
pharyngeal epithelium3.84e-1323
thymic region3.84e-1323
pharyngeal gland3.84e-1323
entire pharyngeal arch endoderm3.84e-1323
thymus primordium3.84e-1323
early pharyngeal endoderm3.84e-1323
pharynx1.72e-1224
gland of gut1.72e-1224
upper respiratory tract1.72e-1224
chordate pharynx1.72e-1224
pharyngeal arch system1.72e-1224
pharyngeal region of foregut1.72e-1224
segment of respiratory tract7.93e-1127
hemopoietic organ6.53e-1029
immune organ6.53e-1029
mixed endoderm/mesoderm-derived structure2.02e-0935
gut epithelium2.54e-0855
connective tissue3.20e-0846
hematopoietic system9.34e-0845
blood island9.34e-0845
craniocervical region1.62e-0736
hemolymphoid system4.30e-0748
immune system4.30e-0748
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