FFCP PHASE1:Mm9::chr1:64579184..64579194,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=12912|HGNC=|MCL_coexpression_id=266|UniProt=Q01147,Q62347,Q543W0,Q547S9|association_with_transcript=-183bp_to_ENSMUST00000049932,ENSMUST00000087366,ENSMUST00000171164,NM_001037726,NM_009952,NM_133828,uc007bgr.1,uc007bgs.1,uc007bgt.1_5end|description=CAGE_peak_7_at_Creb1_5end|id=chr1:64579184..64579194,+|ontology_enrichment_celltype=CL:0000791!6.53e-15!9;CL:0000789!6.53e-15!9;CL:0002420!6.53e-15!9;CL:0002419!6.53e-15!9;CL:0000790!6.53e-15!9;CL:0000624!2.22e-13!8;CL:0000838!4.16e-13!12;CL:0000542!6.90e-12!13;CL:0000051!6.90e-12!13;CL:0000084!9.19e-12!11;CL:0000827!9.19e-12!11;CL:0000893!2.15e-10!6;CL:0002489!2.15e-10!6;CL:0000898!2.15e-10!6;CL:0000809!2.15e-10!6;CL:0000810!2.15e-10!6;CL:0000895!2.15e-10!6;CL:0000808!2.15e-10!6;CL:0000894!2.15e-10!6;CL:0000806!2.15e-10!6;CL:0000807!2.15e-10!6;CL:0000805!2.15e-10!6;CL:0002425!2.15e-10!6;CL:0002436!2.15e-10!6;CL:0002427!2.15e-10!6;CL:0002428!2.15e-10!6;CL:0002429!2.15e-10!6;CL:0002433!2.15e-10!6;CL:0002431!2.15e-10!6;CL:0002432!2.15e-10!6;CL:0000988!1.03e-09!32;CL:0002032!1.03e-09!32;CL:0000037!1.03e-09!32;CL:0000566!1.03e-09!32;CL:0000837!1.03e-09!32;CL:0002031!5.40e-09!25;CL:0000738!1.84e-08!17;CL:0002087!1.84e-08!17|ontology_enrichment_celltype_v019_2=CL:0000791,8.16e-40,9;CL:0000789,8.16e-40,9;CL:0002420,8.16e-40,9;CL:0002419,8.16e-40,9;CL:0000790,8.16e-40,9;CL:0000624,3.28e-33,8;CL:0000084,1.54e-32,11;CL:0000827,1.54e-32,11;CL:0000893,7.46e-31,6;CL:0002489,7.46e-31,6;CL:0000898,7.46e-31,6;CL:0000809,7.46e-31,6;CL:0000810,7.46e-31,6;CL:0000895,7.46e-31,6;CL:0000808,7.46e-31,6;CL:0000894,7.46e-31,6;CL:0000806,7.46e-31,6;CL:0000807,7.46e-31,6;CL:0000805,7.46e-31,6;CL:0002425,7.46e-31,6;CL:0002436,7.46e-31,6;CL:0002427,7.46e-31,6;CL:0002428,7.46e-31,6;CL:0002429,7.46e-31,6;CL:0002433,7.46e-31,6;CL:0002431,7.46e-31,6;CL:0002432,7.46e-31,6;CL:0000838,8.28e-30,12;CL:0000542,1.70e-27,13;CL:0000051,1.70e-27,13;CL:0002031,3.65e-23,25;CL:0000738,5.86e-21,17;CL:0002087,5.86e-21,17;CL:0000988,5.87e-18,32;CL:0002032,5.87e-18,32;CL:0000037,5.87e-18,32;CL:0000837,5.87e-18,32;CL:0002320,2.82e-12,46;CL:0000134,2.82e-12,46;CL:0000219,2.42e-10,54;CL:0000815,6.23e-09,1;CL:0000792,6.23e-09,1;CL:0000625,1.47e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.13e-22!29;UBERON:0002193!1.90e-18!48;UBERON:0002390!2.41e-18!45;UBERON:0003061!2.41e-18!45;UBERON:0002370!1.46e-17!23;UBERON:0000974!1.46e-17!23;UBERON:0004807!1.46e-17!23;UBERON:0005058!1.46e-17!23;UBERON:0003351!1.46e-17!23;UBERON:0009113!1.46e-17!23;UBERON:0003295!1.46e-17!23;UBERON:0009722!1.46e-17!23;UBERON:0005562!1.46e-17!23;UBERON:0007690!1.46e-17!23;UBERON:0006562!1.30e-16!24;UBERON:0003408!1.30e-16!24;UBERON:0001557!1.30e-16!24;UBERON:0001042!1.30e-16!24;UBERON:0008814!1.30e-16!24;UBERON:0009145!1.30e-16!24;UBERON:0000072!3.44e-14!27;UBERON:0000065!3.41e-12!41;UBERON:0001004!9.29e-12!42;UBERON:0000063!2.52e-11!35;UBERON:0002405!3.74e-10!70;UBERON:0005057!6.63e-10!51;UBERON:0003081!1.23e-08!88|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.82e-12,46;UBERON:0002193,1.23e-11,48;UBERON:0002405,1.23e-11,48;UBERON:0002390,8.11e-10,45;UBERON:0003061,8.11e-10,45;UBERON:0004177,6.63e-09,29;UBERON:0005057,6.63e-09,29;UBERON:0001153,8.81e-09,1;UBERON:0001045,8.81e-09,1;UBERON:0000029,1.05e-08,1;UBERON:0001097,1.05e-08,1;UBERON:0003968,1.05e-08,1;UBERON:0001467,1.05e-08,1;UBERON:0002370,4.35e-08,23;UBERON:0000974,4.35e-08,23;UBERON:0004807,4.35e-08,23;UBERON:0005058,4.35e-08,23;UBERON:0003351,4.35e-08,23;UBERON:0009113,4.35e-08,23;UBERON:0003295,4.35e-08,23;UBERON:0009722,4.35e-08,23;UBERON:0005562,4.35e-08,23;UBERON:0007690,4.35e-08,23;UBERON:0006562,9.50e-08,24;UBERON:0003408,9.50e-08,24;UBERON:0001557,9.50e-08,24;UBERON:0001042,9.50e-08,24;UBERON:0008814,9.50e-08,24;UBERON:0009145,9.50e-08,24;UBERON:0000077,2.49e-07,35;UBERON:0000072,7.01e-07,27|phase1_expression=0,0,0,0,0,0.16787927191189,0.467225281191051,2.06597317506522,3.66050677594334,5.85161315804984,1.02730780935303,0.239316476986009,2.05440875917447,1.22388563386596,0,0,0,0.946386496074713,1.7824876368746,1.27316895539409,0.17008658030214,0,0,0,0,0,0.430761996159075,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0.725362142011344,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0.220841518460394,0,1.86391761218122,0,0,0,0.359445373517761,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44292937929755,0.159454768657487,0,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02522528478712,0,0.185194527369712,0.188368457004691,0.410082683163076,0.457556346413045,0.849892149969277,0.839708713941948,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0.632022241256357,0,0.102710957164827,0.129920822977795,0,0.596044064343795,0.360586348559907,0.295379054349154,0.100966449948148,0.304827226619999,0.201652370273681,0.487289403698762,0.577271049841977,0.584384510907845,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p7@Creb1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12912 | |||
|HGNC= | |||
|MCL_coexpression_id=266 | |||
|TSSclassifier=NA | |||
|UniProt=Q01147,Q62347,Q543W0,Q547S9 | |||
|association_with_transcript=-183bp_to_ENSMUST00000049932,ENSMUST00000087366,ENSMUST00000171164,NM_001037726,NM_009952,NM_133828,uc007bgr.1,uc007bgs.1,uc007bgt.1_5end | |||
|cluster_id=chr1:64579184..64579194,+ | |||
|description=CAGE_peak_7_at_Creb1_5end | |||
|id=chr1:64579184..64579194,+ | |||
|ontology_enrichment_celltype=CL:0000791!6.53e-15!9;CL:0000789!6.53e-15!9;CL:0002420!6.53e-15!9;CL:0002419!6.53e-15!9;CL:0000790!6.53e-15!9;CL:0000624!2.22e-13!8;CL:0000838!4.16e-13!12;CL:0000542!6.90e-12!13;CL:0000051!6.90e-12!13;CL:0000084!9.19e-12!11;CL:0000827!9.19e-12!11;CL:0000893!2.15e-10!6;CL:0002489!2.15e-10!6;CL:0000898!2.15e-10!6;CL:0000809!2.15e-10!6;CL:0000810!2.15e-10!6;CL:0000895!2.15e-10!6;CL:0000808!2.15e-10!6;CL:0000894!2.15e-10!6;CL:0000806!2.15e-10!6;CL:0000807!2.15e-10!6;CL:0000805!2.15e-10!6;CL:0002425!2.15e-10!6;CL:0002436!2.15e-10!6;CL:0002427!2.15e-10!6;CL:0002428!2.15e-10!6;CL:0002429!2.15e-10!6;CL:0002433!2.15e-10!6;CL:0002431!2.15e-10!6;CL:0002432!2.15e-10!6;CL:0000988!1.03e-09!32;CL:0002032!1.03e-09!32;CL:0000037!1.03e-09!32;CL:0000566!1.03e-09!32;CL:0000837!1.03e-09!32;CL:0002031!5.40e-09!25;CL:0000738!1.84e-08!17;CL:0002087!1.84e-08!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.16e-40,9;CL:0000789,8.16e-40,9;CL:0002420,8.16e-40,9;CL:0002419,8.16e-40,9;CL:0000790,8.16e-40,9;CL:0000624,3.28e-33,8;CL:0000084,1.54e-32,11;CL:0000827,1.54e-32,11;CL:0000893,7.46e-31,6;CL:0002489,7.46e-31,6;CL:0000898,7.46e-31,6;CL:0000809,7.46e-31,6;CL:0000810,7.46e-31,6;CL:0000895,7.46e-31,6;CL:0000808,7.46e-31,6;CL:0000894,7.46e-31,6;CL:0000806,7.46e-31,6;CL:0000807,7.46e-31,6;CL:0000805,7.46e-31,6;CL:0002425,7.46e-31,6;CL:0002436,7.46e-31,6;CL:0002427,7.46e-31,6;CL:0002428,7.46e-31,6;CL:0002429,7.46e-31,6;CL:0002433,7.46e-31,6;CL:0002431,7.46e-31,6;CL:0002432,7.46e-31,6;CL:0000838,8.28e-30,12;CL:0000542,1.70e-27,13;CL:0000051,1.70e-27,13;CL:0002031,3.65e-23,25;CL:0000738,5.86e-21,17;CL:0002087,5.86e-21,17;CL:0000988,5.87e-18,32;CL:0002032,5.87e-18,32;CL:0000037,5.87e-18,32;CL:0000837,5.87e-18,32;CL:0002320,2.82e-12,46;CL:0000134,2.82e-12,46;CL:0000219,2.42e-10,54;CL:0000815,6.23e-09,1;CL:0000792,6.23e-09,1;CL:0000625,1.47e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.13e-22!29;UBERON:0002193!1.90e-18!48;UBERON:0002390!2.41e-18!45;UBERON:0003061!2.41e-18!45;UBERON:0002370!1.46e-17!23;UBERON:0000974!1.46e-17!23;UBERON:0004807!1.46e-17!23;UBERON:0005058!1.46e-17!23;UBERON:0003351!1.46e-17!23;UBERON:0009113!1.46e-17!23;UBERON:0003295!1.46e-17!23;UBERON:0009722!1.46e-17!23;UBERON:0005562!1.46e-17!23;UBERON:0007690!1.46e-17!23;UBERON:0006562!1.30e-16!24;UBERON:0003408!1.30e-16!24;UBERON:0001557!1.30e-16!24;UBERON:0001042!1.30e-16!24;UBERON:0008814!1.30e-16!24;UBERON:0009145!1.30e-16!24;UBERON:0000072!3.44e-14!27;UBERON:0000065!3.41e-12!41;UBERON:0001004!9.29e-12!42;UBERON:0000063!2.52e-11!35;UBERON:0002405!3.74e-10!70;UBERON:0005057!6.63e-10!51;UBERON:0003081!1.23e-08!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.82e-12,46;UBERON:0002193,1.23e-11,48;UBERON:0002405,1.23e-11,48;UBERON:0002390,8.11e-10,45;UBERON:0003061,8.11e-10,45;UBERON:0004177,6.63e-09,29;UBERON:0005057,6.63e-09,29;UBERON:0001153,8.81e-09,1;UBERON:0001045,8.81e-09,1;UBERON:0000029,1.05e-08,1;UBERON:0001097,1.05e-08,1;UBERON:0003968,1.05e-08,1;UBERON:0001467,1.05e-08,1;UBERON:0002370,4.35e-08,23;UBERON:0000974,4.35e-08,23;UBERON:0004807,4.35e-08,23;UBERON:0005058,4.35e-08,23;UBERON:0003351,4.35e-08,23;UBERON:0009113,4.35e-08,23;UBERON:0003295,4.35e-08,23;UBERON:0009722,4.35e-08,23;UBERON:0005562,4.35e-08,23;UBERON:0007690,4.35e-08,23;UBERON:0006562,9.50e-08,24;UBERON:0003408,9.50e-08,24;UBERON:0001557,9.50e-08,24;UBERON:0001042,9.50e-08,24;UBERON:0008814,9.50e-08,24;UBERON:0009145,9.50e-08,24;UBERON:0000077,2.49e-07,35;UBERON:0000072,7.01e-07,27 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.467225281191051,2.06597317506522,3.66050677594334,5.85161315804984,1.02730780935303,0.239316476986009,2.05440875917447,1.22388563386596,0,0,0,0.946386496074713,1.7824876368746,1.27316895539409,0.17008658030214,0,0,0,0,0,0.430761996159075,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0.725362142011344,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0.220841518460394,0,1.86391761218122,0,0,0,0.359445373517761,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44292937929755,0.159454768657487,0,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02522528478712,0,0.185194527369712,0.188368457004691,0.410082683163076,0.457556346413045,0.849892149969277,0.839708713941948,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0.632022241256357,0,0.102710957164827,0.129920822977795,0,0.596044064343795,0.360586348559907,0.295379054349154,0.100966449948148,0.304827226619999,0.201652370273681,0.487289403698762,0.577271049841977,0.584384510907845,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@Creb1 | |||
}} |
Latest revision as of 07:57, 27 September 2015
Short description: | p7@Creb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Creb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:266 |
Association with transcript: | -183bp_to_ENSMUST00000049932, ENSMUST00000087366, ENSMUST00000171164, NM_001037726, NM_009952, NM_133828, uc007bgr.1, uc007bgs.1, uc007bgt.1_5end |
EntrezGene: | Creb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.82e-12 | 46 |
hemolymphoid system | 1.23e-11 | 48 |
immune system | 1.23e-11 | 48 |
hematopoietic system | 8.11e-10 | 45 |
blood island | 8.11e-10 | 45 |
hemopoietic organ | 6.63e-09 | 29 |
immune organ | 6.63e-09 | 29 |
caecum | 8.81e-09 | 1 |
midgut | 8.81e-09 | 1 |
lymph node | 1.05e-08 | 1 |
axillary lymph node | 1.05e-08 | 1 |
peripheral lymph node | 1.05e-08 | 1 |
shoulder | 1.05e-08 | 1 |
thymus | 4.35e-08 | 23 |
neck | 4.35e-08 | 23 |
respiratory system epithelium | 4.35e-08 | 23 |
hemolymphoid system gland | 4.35e-08 | 23 |
pharyngeal epithelium | 4.35e-08 | 23 |
thymic region | 4.35e-08 | 23 |
pharyngeal gland | 4.35e-08 | 23 |
entire pharyngeal arch endoderm | 4.35e-08 | 23 |
thymus primordium | 4.35e-08 | 23 |
early pharyngeal endoderm | 4.35e-08 | 23 |
pharynx | 9.50e-08 | 24 |
gland of gut | 9.50e-08 | 24 |
upper respiratory tract | 9.50e-08 | 24 |
chordate pharynx | 9.50e-08 | 24 |
pharyngeal arch system | 9.50e-08 | 24 |
pharyngeal region of foregut | 9.50e-08 | 24 |
mixed endoderm/mesoderm-derived structure | 2.49e-07 | 35 |
segment of respiratory tract | 7.01e-07 | 27 |