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FFCP PHASE1:Mm9::chr16:11984454..11984475,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr16:11984454..11984475,+
|DHSsupport=NA
|short_description=p3@Shisa9
|DPIdataset=NA
|description=CAGE_peak_3_at_Shisa9_5end
|association_with_transcript=-198bp_to_ENSMUST00000023138,ENSMUST00000170672_5end
|EntrezGene=72555
|EntrezGene=72555
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=E9QN38,Q9CZN4
|UniProt=E9QN38,Q9CZN4
|association_with_transcript=-198bp_to_ENSMUST00000023138,ENSMUST00000170672_5end
|cluster_id=chr16:11984454..11984475,+
|description=CAGE_peak_3_at_Shisa9_5end
|id=chr16:11984454..11984475,+
|ontology_enrichment_celltype=CL:0000117!5.61e-10!23;CL:0000337!5.61e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.48e-14,23;CL:0000337,2.48e-14,23;CL:0000540,1.14e-08,33;CL:0000047,1.14e-08,33;CL:0000031,1.14e-08,33;CL:0000404,1.14e-08,33;CL:0002319,1.83e-07,43;CL:0000221,3.42e-07,44;CL:0000133,3.42e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!6.06e-23!71;UBERON:0003075!6.06e-23!71;UBERON:0007284!6.06e-23!71;UBERON:0001049!8.11e-23!52;UBERON:0005068!8.11e-23!52;UBERON:0006241!8.11e-23!52;UBERON:0007135!8.11e-23!52;UBERON:0000955!6.16e-22!50;UBERON:0006238!6.16e-22!50;UBERON:0002616!3.43e-21!49;UBERON:0001017!1.38e-19!73;UBERON:0005743!1.38e-19!73;UBERON:0000073!3.09e-18!75;UBERON:0001016!3.09e-18!75;UBERON:0000033!1.24e-17!63;UBERON:0003080!2.17e-17!40;UBERON:0002020!2.28e-17!34;UBERON:0004121!1.07e-16!102;UBERON:0000924!1.07e-16!102;UBERON:0006601!1.07e-16!102;UBERON:0002780!1.23e-16!39;UBERON:0001890!1.23e-16!39;UBERON:0006240!1.23e-16!39;UBERON:0003056!3.59e-16!49;UBERON:0002791!3.40e-14!29;UBERON:0003528!3.40e-14!29;UBERON:0001893!3.40e-14!29;UBERON:0000025!3.14e-10!114;UBERON:0004111!1.12e-09!122;UBERON:0000956!1.35e-09!21;UBERON:0001869!1.35e-09!21;UBERON:0000203!1.35e-09!21;UBERON:0002619!9.25e-09!17;UBERON:0007811!5.29e-08!86;UBERON:0002021!5.88e-08!10;UBERON:0000411!5.88e-08!10;UBERON:0001950!5.88e-08!10;UBERON:0000153!2.91e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.59e-39,54;UBERON:0001049,5.70e-36,52;UBERON:0005068,5.70e-36,52;UBERON:0006241,5.70e-36,52;UBERON:0007135,5.70e-36,52;UBERON:0001017,6.40e-35,73;UBERON:0001016,1.17e-33,75;UBERON:0000955,2.11e-29,47;UBERON:0006238,2.11e-29,47;UBERON:0002020,2.84e-28,34;UBERON:0002616,5.89e-28,46;UBERON:0002346,3.58e-27,64;UBERON:0003075,3.58e-27,64;UBERON:0007284,3.58e-27,64;UBERON:0003080,6.61e-25,40;UBERON:0004121,5.66e-24,95;UBERON:0000924,5.66e-24,95;UBERON:0006601,5.66e-24,95;UBERON:0002780,1.98e-23,39;UBERON:0001890,1.98e-23,39;UBERON:0006240,1.98e-23,39;UBERON:0010371,1.74e-22,73;UBERON:0003528,1.18e-21,29;UBERON:0002791,1.18e-21,29;UBERON:0001893,1.18e-21,29;UBERON:0003056,8.34e-19,49;UBERON:0010314,9.25e-18,92;UBERON:0002021,1.13e-15,10;UBERON:0000411,1.13e-15,10;UBERON:0001950,1.13e-15,10;UBERON:0002619,1.24e-13,17;UBERON:0000025,3.31e-13,114;UBERON:0004111,1.62e-12,122;UBERON:0000956,2.59e-12,21;UBERON:0001869,2.59e-12,21;UBERON:0000203,2.59e-12,21;UBERON:0002420,2.52e-11,8;UBERON:0007245,2.52e-11,8;UBERON:0010009,2.52e-11,8;UBERON:0010011,2.52e-11,8;UBERON:0000454,2.52e-11,8;UBERON:0003076,2.94e-11,12;UBERON:0003057,2.94e-11,12;UBERON:0002240,2.23e-09,6;UBERON:0005174,2.23e-09,6;UBERON:0001137,2.23e-09,6;UBERON:0001948,4.11e-08,5;UBERON:0002315,4.11e-08,5;UBERON:0002950,1.11e-07,4;UBERON:0001891,1.11e-07,4;UBERON:0009616,1.11e-07,4;UBERON:0010286,1.11e-07,4;UBERON:0000369,6.67e-07,5;UBERON:0002435,6.67e-07,5;UBERON:0000204,6.67e-07,5;UBERON:0010082,6.67e-07,5;UBERON:0011216,7.07e-07,194
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.659058548203415,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,0,0,0,0,0,0,1.79760066311043,1.53687322128622,0.414758449233911,0.540023753326763,0.420649922702764,9.42648248532552,4.63823935998388,0.489963196859816,0.0958454710182364,1.83843757322004,15.4162233399144,11.6195477657521,10.752457327937,2.2420668914133,1.64677758484337,1.04182674111352,5.862842979029,12.9435400307286,7.33431589328689,6.18720029494702,4.8406371471695,1.86399445825301,0,0,4.34796733052517,0,0,0.539703191637817,0.649776417447669,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0.505524445014783,0.22836775943812,0.258937883647172,1.1875371125186,1.56136794089522,0.913396434936424,0.922461989024234,0.904335843315735,0.823120949949934,0.628332956648377,0.247194967734374,0.289198713839823,0,0,0,0,0,2.34224637609238,1.25668024088073,0,0,0,0,11.3840885947665,6.40500843946077,1.50785222535437,7.12679712788333,5.8814555185976,10.8049783170971,8.4365456795234,2.85150218780886,0.373220911830279,1.0108910337347,0.420883711772948,0,0.459804208866946,0.180062129805349,0.60281927134286,0.136072998302656,0.12811372028485,0.281105173679186,0.517406741478031,0,0.189106080167819,0,0.43839146485515,0.278047249225598,0,0.205782136407943,1.19420560091096,0,0,0,0,0,0.540186184383045,0.473489471170421,0.590292695242212,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,4.6263788684108,1.3377599609307,0.330418782983798,0,0,0,0.257734922644187,0.605050573870028,0,0.380451252225118,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0.810676133875177,0,0,0.372140947668503,0,0,0,0,0.554259570499814,0.757965647081939,0.488894929326078,0.509235257325564,0.938760993154008,0.502518772325447,0,0,0.157635144106191,0.664394068946325,0.318909537314974,0,0.172684981865896,0.289298117163023,0,0,0,0,4.49541651965817,5.74337264301796,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0,7.39039027770156,0.283880170416537,1.24645922567079,2.11753047159649,0.329940245945071,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.922305443831782,0.258428293168221,0,0.356497378384721,0,0,1.03135543248187,3.06395645178409,0.18006109403131,0.517434735131018,0,1.24138163549592,1.96205699362278,0.658196082408484,0.608929898229199,0.469343416127421,0.21183207086382,0.220528398054962,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0,4.82105785227325,0,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0.474503990371703,0.406638934253697,0.648032044930808,0.418176592028937,0,0.134864346384821,0.41326727862668,0,0,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.516639293910924,0.675824501963113,0.58678619322877,0.651021924219751,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0.192423683280659,0,0,0,0,0,3.28422309854724,0.375364950902364,0,0.428736758158132,0.501572104035363,6.7770221114048,5.06357760157895,6.87474616127276,7.04598047609119,3.42541259885321,6.7985450765073,6.07520250208625,7.65546045481175,6.79713613476307,7.7664046762773,0,0.399024873401031,0.170733605754134,0.972426868273176,0.209613162627982,0.367687016900028,0.666740183404846,0.618105171716683,0.64183841918363,0.505394423527595,1.01391719956096,0.943131706930381,0.37456602987953,0.512201219238954,0.574354689556133,0.476293691283074,1.0429589335037,0.38581844092741,0.412085900803307,0.735994600671987,0.342869252385415,0.887379030796687,0.715308569841963,1.0174249164263,0.658765662907314,0.338458431566706,0.365855945745545,0.263069711437843,0.271608227691724,1.68342681497322,0.237270036248348,0.788035859004508,1.22769312950907,0.154936841185966,0.578719832943424,0.499621155875892,0.467863216890817,0.429742108096597,0.765153328275374,0.220591419119515,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.659058548203415,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,0,0,0,0,0,0,1.79760066311043,1.53687322128622,0.414758449233911,0.540023753326763,0.420649922702764,9.42648248532552,4.63823935998388,0.489963196859816,0.0958454710182364,1.83843757322004,15.4162233399144,11.6195477657521,10.752457327937,2.2420668914133,1.64677758484337,1.04182674111352,5.862842979029,12.9435400307286,7.33431589328689,6.18720029494702,4.8406371471695,1.86399445825301,0,0,4.34796733052517,0,0,0.539703191637817,0.649776417447669,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0.505524445014783,0.22836775943812,0.258937883647172,1.1875371125186,1.56136794089522,0.913396434936424,0.922461989024234,0.904335843315735,0.823120949949934,0.628332956648377,0.247194967734374,0.289198713839823,0,0,0,0,0,2.34224637609238,1.25668024088073,0,0,0,0,11.3840885947665,6.40500843946077,1.50785222535437,7.12679712788333,5.8814555185976,10.8049783170971,8.4365456795234,2.85150218780886,0.373220911830279,1.0108910337347,0.420883711772948,0,0.459804208866946,0.180062129805349,0.60281927134286,0.136072998302656,0.12811372028485,0.281105173679186,0.517406741478031,0,0.189106080167819,0,0.43839146485515,0.278047249225598,0,0.205782136407943,1.19420560091096,0,0,0,0,0,0.540186184383045,0.473489471170421,0.590292695242212,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,4.6263788684108,1.3377599609307,0.330418782983798,0,0,0,0.257734922644187,0.605050573870028,0,0.380451252225118,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0.810676133875177,0,0,0.372140947668503,0,0,0,0,0.554259570499814,0.757965647081939,0.488894929326078,0.509235257325564,0.938760993154008,0.502518772325447,0,0,0.157635144106191,0.664394068946325,0.318909537314974,0,0.172684981865896,0.289298117163023,0,0,0,0,4.49541651965817,5.74337264301796,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0,7.39039027770156,0.283880170416537,1.24645922567079,2.11753047159649,0.329940245945071,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.922305443831782,0.258428293168221,0,0.356497378384721,0,0,1.03135543248187,3.06395645178409,0.18006109403131,0.517434735131018,0,1.24138163549592,1.96205699362278,0.658196082408484,0.608929898229199,0.469343416127421,0.21183207086382,0.220528398054962,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0,4.82105785227325,0,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0.474503990371703,0.406638934253697,0.648032044930808,0.418176592028937,0,0.134864346384821,0.41326727862668,0,0,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.516639293910924,0.675824501963113,0.58678619322877,0.651021924219751,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0.192423683280659,0,0,0,0,0,3.28422309854724,0.375364950902364,0,0.428736758158132,0.501572104035363,6.7770221114048,5.06357760157895,6.87474616127276,7.04598047609119,3.42541259885321,6.7985450765073,6.07520250208625,7.65546045481175,6.79713613476307,7.7664046762773,0,0.399024873401031,0.170733605754134,0.972426868273176,0.209613162627982,0.367687016900028,0.666740183404846,0.618105171716683,0.64183841918363,0.505394423527595,1.01391719956096,0.943131706930381,0.37456602987953,0.512201219238954,0.574354689556133,0.476293691283074,1.0429589335037,0.38581844092741,0.412085900803307,0.735994600671987,0.342869252385415,0.887379030796687,0.715308569841963,1.0174249164263,0.658765662907314,0.338458431566706,0.365855945745545,0.263069711437843,0.271608227691724,1.68342681497322,0.237270036248348,0.788035859004508,1.22769312950907,0.154936841185966,0.578719832943424,0.499621155875892,0.467863216890817,0.429742108096597,0.765153328275374,0.220591419119515,0.231867835620421
|short_description=p3@Shisa9
}}
}}

Latest revision as of 15:20, 1 October 2015

Short description:p3@Shisa9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Shisa9_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -198bp_to_ENSMUST00000023138, ENSMUST00000170672_5end
EntrezGene:Shisa9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Shisa9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.75
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.33
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A411.38
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D57.13
cortex, neonate N30.CNhs11107.1392-42F25.88
diencephalon, adult.CNhs10482.20-12F210.80
diencephalon, neonate N30.CNhs11201.1388-42B28.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.50
medulla oblongata, neonate N30.CNhs11200.1396-42A35.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I97.39
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.28
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.05
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.48e-1423
neuroblast (sensu Vertebrata)2.48e-1423
neuron1.14e-0833
neuronal stem cell1.14e-0833
neuroblast1.14e-0833
electrically signaling cell1.14e-0833
neural cell1.83e-0743
ectodermal cell3.42e-0744
neurectodermal cell3.42e-0744

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.59e-3954
neural tube5.70e-3652
neural rod5.70e-3652
future spinal cord5.70e-3652
neural keel5.70e-3652
central nervous system6.40e-3573
nervous system1.17e-3375
brain2.11e-2947
future brain2.11e-2947
gray matter2.84e-2834
regional part of brain5.89e-2846
neurectoderm3.58e-2764
neural plate3.58e-2764
presumptive neural plate3.58e-2764
anterior neural tube6.61e-2540
ectoderm-derived structure5.66e-2495
ectoderm5.66e-2495
presumptive ectoderm5.66e-2495
regional part of forebrain1.98e-2339
forebrain1.98e-2339
future forebrain1.98e-2339
ecto-epithelium1.74e-2273
brain grey matter1.18e-2129
regional part of telencephalon1.18e-2129
telencephalon1.18e-2129
pre-chordal neural plate8.34e-1949
structure with developmental contribution from neural crest9.25e-1892
occipital lobe1.13e-1510
visual cortex1.13e-1510
neocortex1.13e-1510
regional part of cerebral cortex1.24e-1317
tube3.31e-13114
anatomical conduit1.62e-12122
cerebral cortex2.59e-1221
cerebral hemisphere2.59e-1221
pallium2.59e-1221
basal ganglion2.52e-118
nuclear complex of neuraxis2.52e-118
aggregate regional part of brain2.52e-118
collection of basal ganglia2.52e-118
cerebral subcortex2.52e-118
posterior neural tube2.94e-1112
chordal neural plate2.94e-1112
spinal cord2.23e-096
dorsal region element2.23e-096
dorsum2.23e-096
regional part of spinal cord4.11e-085
gray matter of spinal cord4.11e-085
regional part of midbrain1.11e-074
midbrain1.11e-074
presumptive midbrain1.11e-074
midbrain neural tube1.11e-074
corpus striatum6.67e-075
striatum6.67e-075
ventral part of telencephalon6.67e-075
future corpus striatum6.67e-075
organ system subdivision7.07e-07194
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