FFCP PHASE1:Mm9::chr3:17689892..17689955,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70441 | |EntrezGene=70441 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_033490,uc008orj.2_5end | |association_with_transcript=0bp_to_NR_033490,uc008orj.2_5end | ||
|cluster_id=chr3:17689892..17689955,+ | |||
|description=CAGE_peak_1_at_2610100L16Rik_5end | |description=CAGE_peak_1_at_2610100L16Rik_5end | ||
|id=chr3:17689892..17689955,+ | |id=chr3:17689892..17689955,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.66e-20!23;CL:0000337!1.66e-20!23;CL:0000540!2.64e-12!33;CL:0000047!2.64e-12!33;CL:0000031!2.64e-12!33;CL:0000404!2.64e-12!33;CL:0002319!1.97e-09!43;CL:0000393!4.58e-09!39;CL:0000211!4.58e-09!39;CL:0000221!5.17e-09!44;CL:0000133!5.17e-09!44;CL:0002609!5.37e-07!6;CL:0000055!6.77e-07!50 | |ontology_enrichment_celltype=CL:0000117!1.66e-20!23;CL:0000337!1.66e-20!23;CL:0000540!2.64e-12!33;CL:0000047!2.64e-12!33;CL:0000031!2.64e-12!33;CL:0000404!2.64e-12!33;CL:0002319!1.97e-09!43;CL:0000393!4.58e-09!39;CL:0000211!4.58e-09!39;CL:0000221!5.17e-09!44;CL:0000133!5.17e-09!44;CL:0002609!5.37e-07!6;CL:0000055!6.77e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.27e-23,23;CL:0000337,6.27e-23,23;CL:0000540,2.25e-13,33;CL:0000047,2.25e-13,33;CL:0000031,2.25e-13,33;CL:0000404,2.25e-13,33;CL:0000393,4.29e-10,39;CL:0000211,4.29e-10,39;CL:0002319,1.87e-08,43;CL:0000221,4.26e-08,44;CL:0000133,4.26e-08,44;CL:0002609,1.08e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.24e-30!63;UBERON:0003056!2.80e-28!49;UBERON:0001049!3.80e-28!52;UBERON:0005068!3.80e-28!52;UBERON:0006241!3.80e-28!52;UBERON:0007135!3.80e-28!52;UBERON:0002346!1.30e-27!71;UBERON:0003075!1.30e-27!71;UBERON:0007284!1.30e-27!71;UBERON:0001017!9.23e-27!73;UBERON:0005743!9.23e-27!73;UBERON:0000955!1.12e-25!50;UBERON:0006238!1.12e-25!50;UBERON:0000073!1.71e-25!75;UBERON:0001016!1.71e-25!75;UBERON:0002020!3.52e-25!34;UBERON:0002616!9.53e-25!49;UBERON:0004121!9.18e-23!102;UBERON:0000924!9.18e-23!102;UBERON:0006601!9.18e-23!102;UBERON:0003080!3.01e-21!40;UBERON:0002791!1.24e-20!29;UBERON:0003528!1.24e-20!29;UBERON:0001893!1.24e-20!29;UBERON:0002780!2.12e-20!39;UBERON:0001890!2.12e-20!39;UBERON:0006240!2.12e-20!39;UBERON:0007811!1.39e-18!86;UBERON:0000153!2.22e-15!94;UBERON:0000956!3.34e-14!21;UBERON:0001869!3.34e-14!21;UBERON:0000203!3.34e-14!21;UBERON:0002619!8.50e-11!17;UBERON:0002021!5.64e-09!10;UBERON:0000411!5.64e-09!10;UBERON:0001950!5.64e-09!10;UBERON:0000970!8.49e-08!9;UBERON:0000019!8.49e-08!9;UBERON:0000047!8.49e-08!9;UBERON:0004088!8.49e-08!9;UBERON:0002104!8.49e-08!9;UBERON:0001456!8.49e-08!9;UBERON:0003072!8.49e-08!9;UBERON:0003071!8.49e-08!9;UBERON:0004128!8.49e-08!9;UBERON:0002420!1.20e-07!8;UBERON:0007245!1.20e-07!8;UBERON:0010009!1.20e-07!8;UBERON:0010011!1.20e-07!8;UBERON:0000454!1.20e-07!8;UBERON:0003076!2.44e-07!12;UBERON:0003057!2.44e-07!12 | |ontology_enrichment_uberon=UBERON:0000033!1.24e-30!63;UBERON:0003056!2.80e-28!49;UBERON:0001049!3.80e-28!52;UBERON:0005068!3.80e-28!52;UBERON:0006241!3.80e-28!52;UBERON:0007135!3.80e-28!52;UBERON:0002346!1.30e-27!71;UBERON:0003075!1.30e-27!71;UBERON:0007284!1.30e-27!71;UBERON:0001017!9.23e-27!73;UBERON:0005743!9.23e-27!73;UBERON:0000955!1.12e-25!50;UBERON:0006238!1.12e-25!50;UBERON:0000073!1.71e-25!75;UBERON:0001016!1.71e-25!75;UBERON:0002020!3.52e-25!34;UBERON:0002616!9.53e-25!49;UBERON:0004121!9.18e-23!102;UBERON:0000924!9.18e-23!102;UBERON:0006601!9.18e-23!102;UBERON:0003080!3.01e-21!40;UBERON:0002791!1.24e-20!29;UBERON:0003528!1.24e-20!29;UBERON:0001893!1.24e-20!29;UBERON:0002780!2.12e-20!39;UBERON:0001890!2.12e-20!39;UBERON:0006240!2.12e-20!39;UBERON:0007811!1.39e-18!86;UBERON:0000153!2.22e-15!94;UBERON:0000956!3.34e-14!21;UBERON:0001869!3.34e-14!21;UBERON:0000203!3.34e-14!21;UBERON:0002619!8.50e-11!17;UBERON:0002021!5.64e-09!10;UBERON:0000411!5.64e-09!10;UBERON:0001950!5.64e-09!10;UBERON:0000970!8.49e-08!9;UBERON:0000019!8.49e-08!9;UBERON:0000047!8.49e-08!9;UBERON:0004088!8.49e-08!9;UBERON:0002104!8.49e-08!9;UBERON:0001456!8.49e-08!9;UBERON:0003072!8.49e-08!9;UBERON:0003071!8.49e-08!9;UBERON:0004128!8.49e-08!9;UBERON:0002420!1.20e-07!8;UBERON:0007245!1.20e-07!8;UBERON:0010009!1.20e-07!8;UBERON:0010011!1.20e-07!8;UBERON:0000454!1.20e-07!8;UBERON:0003076!2.44e-07!12;UBERON:0003057!2.44e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.50e-32,64;UBERON:0003075,9.50e-32,64;UBERON:0007284,9.50e-32,64;UBERON:0002020,2.14e-28,34;UBERON:0000073,1.87e-27,54;UBERON:0003056,3.06e-27,49;UBERON:0001049,3.88e-26,52;UBERON:0005068,3.88e-26,52;UBERON:0006241,3.88e-26,52;UBERON:0007135,3.88e-26,52;UBERON:0010371,1.17e-25,73;UBERON:0004121,5.01e-24,95;UBERON:0000924,5.01e-24,95;UBERON:0006601,5.01e-24,95;UBERON:0001017,2.57e-23,73;UBERON:0003528,2.96e-23,29;UBERON:0002791,2.96e-23,29;UBERON:0001893,2.96e-23,29;UBERON:0001016,3.01e-22,75;UBERON:0000955,1.73e-21,47;UBERON:0006238,1.73e-21,47;UBERON:0002616,1.58e-20,46;UBERON:0003080,1.26e-19,40;UBERON:0002780,1.01e-18,39;UBERON:0001890,1.01e-18,39;UBERON:0006240,1.01e-18,39;UBERON:0010314,7.49e-17,92;UBERON:0000956,5.45e-16,21;UBERON:0001869,5.45e-16,21;UBERON:0000203,5.45e-16,21;UBERON:0002619,3.85e-12,17;UBERON:0002021,6.37e-10,10;UBERON:0000411,6.37e-10,10;UBERON:0001950,6.37e-10,10;UBERON:0000970,1.35e-08,9;UBERON:0000019,1.35e-08,9;UBERON:0000047,1.35e-08,9;UBERON:0010312,1.35e-08,9;UBERON:0004088,1.35e-08,9;UBERON:0002104,1.35e-08,9;UBERON:0001456,1.35e-08,9;UBERON:0003072,1.35e-08,9;UBERON:0004128,1.35e-08,9;UBERON:0003071,1.35e-08,9;UBERON:0002420,2.00e-08,8;UBERON:0007245,2.00e-08,8;UBERON:0010009,2.00e-08,8;UBERON:0010011,2.00e-08,8;UBERON:0000454,2.00e-08,8;UBERON:0003076,4.91e-07,12;UBERON:0003057,4.91e-07,12;UBERON:0002240,5.32e-07,6;UBERON:0005174,5.32e-07,6;UBERON:0001137,5.32e-07,6;UBERON:0000369,7.17e-07,5;UBERON:0002435,7.17e-07,5;UBERON:0000204,7.17e-07,5;UBERON:0010082,7.17e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,60.2903053361601,65.06589045046,67.8199601751612,0,0,0,0,0,0.299600110518405,0.768436610643109,26.5445407509703,37.9366686712051,24.1873705554089,32.2785612376298,18.7738259808871,39.3195465480002,30.3830143127809,50.5570332635512,5.50579404996943,10.7257363991558,10.2916377281683,52.0950836534266,51.6905186353615,61.4677777256977,9.77140496504833,9.00420176050688,4.88954392885792,16.7938293719991,26.0540175862358,41.7534758648673,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92780797011547,5.23616767033638,0,0,0,0,21.12048015608,17.3850229071078,43.7277145352768,19.8159725019195,24.2929684463814,10.5971902725376,20.1179166204019,0.101839363850316,0,0,5.89237196482127,5.98554037628437,9.42598628177239,10.803727788321,22.3043130396858,37.2840015349277,34.5907044769094,30.078253583673,16.557015727297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.14985825118033,11.3195073617213,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0779907091576,10.4318401067061,0,0.252470927204373,0,0,0,0,0,0,0,0,0,29.2402397943844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98067203434441,0,0.428674070063185,0,0.356737635204141,0.493647061806363,0.608929898229199,0,0,0,0,0,0,0,0,0,11.1255181206306,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9892923801925,14.2700823317225,17.7597609166213,33.3395173746754,16.4419804744954,22.661816921691,14.1754725048679,20.2644541450899,15.406841905463,12.4262474820437,7.16132698330819,14.7639203158381,12.8050204315601,3.64660075602441,6.28839487883947,4.96377472815038,6.22290837844523,4.32673620201678,3.53011130550997,4.04315538822076,7.09742039692671,5.47016390019621,4.86935838843389,4.73786127796033,5.80098236451694,7.1444053692461,4.51948871184936,5.40145817298374,7.00546031365621,5.5935589651071,6.17164654293748,8.34136288948886,2.38436189947321,6.97662799835177,6.11710972699649,6.51532480765909,6.58540702341981,5.26139422875686,5.70377278152619,2.24456908663095,4.38949567059444,4.23569274214923,6.95692773388472,6.8172210121825,3.85813221962283,13.4897712086491,4.21076895201735,4.29742108096597,2.48674831689496,1.10295709559758,0.695603506861264 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|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,60.2903053361601,65.06589045046,67.8199601751612,0,0,0,0,0,0.299600110518405,0.768436610643109,26.5445407509703,37.9366686712051,24.1873705554089,32.2785612376298,18.7738259808871,39.3195465480002,30.3830143127809,50.5570332635512,5.50579404996943,10.7257363991558,10.2916377281683,52.0950836534266,51.6905186353615,61.4677777256977,9.77140496504833,9.00420176050688,4.88954392885792,16.7938293719991,26.0540175862358,41.7534758648673,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92780797011547,5.23616767033638,0,0,0,0,21.12048015608,17.3850229071078,43.7277145352768,19.8159725019195,24.2929684463814,10.5971902725376,20.1179166204019,0.101839363850316,0,0,5.89237196482127,5.98554037628437,9.42598628177239,10.803727788321,22.3043130396858,37.2840015349277,34.5907044769094,30.078253583673,16.557015727297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.14985825118033,11.3195073617213,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0779907091576,10.4318401067061,0,0.252470927204373,0,0,0,0,0,0,0,0,0,29.2402397943844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98067203434441,0,0.428674070063185,0,0.356737635204141,0.493647061806363,0.608929898229199,0,0,0,0,0,0,0,0,0,11.1255181206306,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9892923801925,14.2700823317225,17.7597609166213,33.3395173746754,16.4419804744954,22.661816921691,14.1754725048679,20.2644541450899,15.406841905463,12.4262474820437,7.16132698330819,14.7639203158381,12.8050204315601,3.64660075602441,6.28839487883947,4.96377472815038,6.22290837844523,4.32673620201678,3.53011130550997,4.04315538822076,7.09742039692671,5.47016390019621,4.86935838843389,4.73786127796033,5.80098236451694,7.1444053692461,4.51948871184936,5.40145817298374,7.00546031365621,5.5935589651071,6.17164654293748,8.34136288948886,2.38436189947321,6.97662799835177,6.11710972699649,6.51532480765909,6.58540702341981,5.26139422875686,5.70377278152619,2.24456908663095,4.38949567059444,4.23569274214923,6.95692773388472,6.8172210121825,3.85813221962283,13.4897712086491,4.21076895201735,4.29742108096597,2.48674831689496,1.10295709559758,0.695603506861264 | ||
|short_description=p1@2610100L16Rik | |short_description=p1@2610100L16Rik | ||
}} | }} |
Latest revision as of 20:47, 1 October 2015
Short description: | p1@2610100L16Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_2610100L16Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_NR_033490, uc008orj.2_5end |
EntrezGene: | 2610100L16Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.27e-23 | 23 |
neuroblast (sensu Vertebrata) | 6.27e-23 | 23 |
neuron | 2.25e-13 | 33 |
neuronal stem cell | 2.25e-13 | 33 |
neuroblast | 2.25e-13 | 33 |
electrically signaling cell | 2.25e-13 | 33 |
electrically responsive cell | 4.29e-10 | 39 |
electrically active cell | 4.29e-10 | 39 |
neural cell | 1.87e-08 | 43 |
ectodermal cell | 4.26e-08 | 44 |
neurectodermal cell | 4.26e-08 | 44 |
neuron of cerebral cortex | 1.08e-07 | 6 |