FFCP PHASE1:Mm9::chr6:8899670..8899686,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18231 | |EntrezGene=18231 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q61200 | |UniProt=Q61200 | ||
|association_with_transcript=0bp_to_ENSMUST00000060369_5end | |association_with_transcript=0bp_to_ENSMUST00000060369_5end | ||
|cluster_id=chr6:8899670..8899686,+ | |||
|description=CAGE_peak_5_at_Nxph1_5end | |description=CAGE_peak_5_at_Nxph1_5end | ||
|id=chr6:8899670..8899686,+ | |id=chr6:8899670..8899686,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.83e-22!23;CL:0000337!2.83e-22!23;CL:0000540!4.55e-13!33;CL:0000047!4.55e-13!33;CL:0000031!4.55e-13!33;CL:0000404!4.55e-13!33;CL:0000393!6.67e-10!39;CL:0000211!6.67e-10!39;CL:0002319!2.55e-08!43;CL:0000221!5.66e-08!44;CL:0000133!5.66e-08!44 | |ontology_enrichment_celltype=CL:0000117!2.83e-22!23;CL:0000337!2.83e-22!23;CL:0000540!4.55e-13!33;CL:0000047!4.55e-13!33;CL:0000031!4.55e-13!33;CL:0000404!4.55e-13!33;CL:0000393!6.67e-10!39;CL:0000211!6.67e-10!39;CL:0002319!2.55e-08!43;CL:0000221!5.66e-08!44;CL:0000133!5.66e-08!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.92e-33,23;CL:0000337,7.92e-33,23;CL:0000540,2.05e-21,33;CL:0000047,2.05e-21,33;CL:0000031,2.05e-21,33;CL:0000404,2.05e-21,33;CL:0000393,2.19e-17,39;CL:0000211,2.19e-17,39;CL:0002319,2.51e-15,43;CL:0000221,7.16e-15,44;CL:0000133,7.16e-15,44;CL:0002612,1.62e-08,3;CL:0000120,5.63e-08,3;CL:0002610,6.26e-08,3;CL:0002321,1.17e-07,70;CL:0002614,2.06e-07,3;CL:0002613,3.08e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.44e-28!52;UBERON:0005068!3.44e-28!52;UBERON:0006241!3.44e-28!52;UBERON:0007135!3.44e-28!52;UBERON:0002020!1.97e-27!34;UBERON:0001017!4.42e-26!73;UBERON:0005743!4.42e-26!73;UBERON:0000955!4.71e-26!50;UBERON:0006238!4.71e-26!50;UBERON:0002616!5.93e-25!49;UBERON:0000073!6.12e-25!75;UBERON:0001016!6.12e-25!75;UBERON:0002791!1.66e-21!29;UBERON:0003528!1.66e-21!29;UBERON:0001893!1.66e-21!29;UBERON:0000033!2.58e-21!63;UBERON:0003080!5.06e-20!40;UBERON:0002346!5.14e-20!71;UBERON:0003075!5.14e-20!71;UBERON:0007284!5.14e-20!71;UBERON:0002780!4.68e-19!39;UBERON:0001890!4.68e-19!39;UBERON:0006240!4.68e-19!39;UBERON:0003056!8.00e-18!49;UBERON:0004121!1.34e-16!102;UBERON:0000924!1.34e-16!102;UBERON:0006601!1.34e-16!102;UBERON:0000956!1.11e-13!21;UBERON:0001869!1.11e-13!21;UBERON:0000203!1.11e-13!21;UBERON:0007811!5.76e-12!86;UBERON:0002021!4.73e-11!10;UBERON:0000411!4.73e-11!10;UBERON:0001950!4.73e-11!10;UBERON:0002619!1.31e-10!17;UBERON:0000153!1.35e-10!94;UBERON:0002420!3.10e-09!8;UBERON:0007245!3.10e-09!8;UBERON:0010009!3.10e-09!8;UBERON:0010011!3.10e-09!8;UBERON:0000454!3.10e-09!8;UBERON:0003076!1.21e-08!12;UBERON:0003057!1.21e-08!12;UBERON:0002240!5.97e-08!6;UBERON:0005174!5.97e-08!6;UBERON:0001137!5.97e-08!6;UBERON:0002298!2.14e-07!6;UBERON:0001948!2.82e-07!5;UBERON:0002315!2.82e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!3.44e-28!52;UBERON:0005068!3.44e-28!52;UBERON:0006241!3.44e-28!52;UBERON:0007135!3.44e-28!52;UBERON:0002020!1.97e-27!34;UBERON:0001017!4.42e-26!73;UBERON:0005743!4.42e-26!73;UBERON:0000955!4.71e-26!50;UBERON:0006238!4.71e-26!50;UBERON:0002616!5.93e-25!49;UBERON:0000073!6.12e-25!75;UBERON:0001016!6.12e-25!75;UBERON:0002791!1.66e-21!29;UBERON:0003528!1.66e-21!29;UBERON:0001893!1.66e-21!29;UBERON:0000033!2.58e-21!63;UBERON:0003080!5.06e-20!40;UBERON:0002346!5.14e-20!71;UBERON:0003075!5.14e-20!71;UBERON:0007284!5.14e-20!71;UBERON:0002780!4.68e-19!39;UBERON:0001890!4.68e-19!39;UBERON:0006240!4.68e-19!39;UBERON:0003056!8.00e-18!49;UBERON:0004121!1.34e-16!102;UBERON:0000924!1.34e-16!102;UBERON:0006601!1.34e-16!102;UBERON:0000956!1.11e-13!21;UBERON:0001869!1.11e-13!21;UBERON:0000203!1.11e-13!21;UBERON:0007811!5.76e-12!86;UBERON:0002021!4.73e-11!10;UBERON:0000411!4.73e-11!10;UBERON:0001950!4.73e-11!10;UBERON:0002619!1.31e-10!17;UBERON:0000153!1.35e-10!94;UBERON:0002420!3.10e-09!8;UBERON:0007245!3.10e-09!8;UBERON:0010009!3.10e-09!8;UBERON:0010011!3.10e-09!8;UBERON:0000454!3.10e-09!8;UBERON:0003076!1.21e-08!12;UBERON:0003057!1.21e-08!12;UBERON:0002240!5.97e-08!6;UBERON:0005174!5.97e-08!6;UBERON:0001137!5.97e-08!6;UBERON:0002298!2.14e-07!6;UBERON:0001948!2.82e-07!5;UBERON:0002315!2.82e-07!5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.31e-42,54;UBERON:0002020,5.86e-39,34;UBERON:0001017,3.51e-38,73;UBERON:0001016,5.94e-37,75;UBERON:0001049,4.99e-35,52;UBERON:0005068,4.99e-35,52;UBERON:0006241,4.99e-35,52;UBERON:0007135,4.99e-35,52;UBERON:0004121,3.36e-29,95;UBERON:0000924,3.36e-29,95;UBERON:0006601,3.36e-29,95;UBERON:0002346,4.55e-29,64;UBERON:0003075,4.55e-29,64;UBERON:0007284,4.55e-29,64;UBERON:0003528,3.08e-28,29;UBERON:0002791,3.08e-28,29;UBERON:0001893,3.08e-28,29;UBERON:0000955,4.24e-28,47;UBERON:0006238,4.24e-28,47;UBERON:0002616,2.60e-26,46;UBERON:0003080,4.56e-26,40;UBERON:0010371,1.38e-24,73;UBERON:0002780,2.18e-24,39;UBERON:0001890,2.18e-24,39;UBERON:0006240,2.18e-24,39;UBERON:0003056,4.34e-22,49;UBERON:0002021,3.64e-20,10;UBERON:0000411,3.64e-20,10;UBERON:0001950,3.64e-20,10;UBERON:0010314,5.32e-18,92;UBERON:0002420,1.33e-16,8;UBERON:0007245,1.33e-16,8;UBERON:0010009,1.33e-16,8;UBERON:0010011,1.33e-16,8;UBERON:0000454,1.33e-16,8;UBERON:0000956,1.59e-14,21;UBERON:0001869,1.59e-14,21;UBERON:0000203,1.59e-14,21;UBERON:0002619,2.52e-13,17;UBERON:0001948,8.99e-13,5;UBERON:0002315,8.99e-13,5;UBERON:0000025,4.32e-12,114;UBERON:0004111,7.82e-11,122;UBERON:0000369,8.80e-11,5;UBERON:0002435,8.80e-11,5;UBERON:0000204,8.80e-11,5;UBERON:0010082,8.80e-11,5;UBERON:0002240,1.46e-10,6;UBERON:0005174,1.46e-10,6;UBERON:0001137,1.46e-10,6;UBERON:0002950,2.46e-09,4;UBERON:0001891,2.46e-09,4;UBERON:0009616,2.46e-09,4;UBERON:0010286,2.46e-09,4;UBERON:0011216,2.47e-09,194;UBERON:0003076,4.34e-09,12;UBERON:0003057,4.34e-09,12;UBERON:0002257,1.62e-08,3;UBERON:0004684,6.26e-08,3;UBERON:0002275,6.26e-08,3;UBERON:0002038,2.06e-07,3;UBERON:0009663,2.06e-07,3;UBERON:0009661,2.06e-07,3;UBERON:0000125,2.06e-07,3;UBERON:0002308,2.06e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24864567805155,3.70293685490423,3.1691570175309,0,0,0,0,0,0,0,1.03689612308478,0.405017814995072,0.841299845405528,4.57041575046086,2.87129103237098,1.46988959057945,0.958454710182364,0,8.8092704799511,3.57524546638526,2.15049146558741,2.50583946687368,2.8361169516747,1.56274011167028,1.11673199600552,4.50210088025344,2.90316670775939,4.71405736757868,4.41352210477219,5.96478226640962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,2.39665023047716,3.20250421973039,1.00523481690292,1.73824320192276,0.767146371990992,4.1557608911912,1.94689515681309,0.101839363850316,0,0,0,0,0,0.360124259610698,0,0.136072998302656,0,0,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,1.87538698547525,0,0,0,0,0,0,0,0,0,0,0,3.85585579706168,0,0,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,4.14292712856459,3.43737308063638,1.89038500578056,1.37016503954128,1.5107877947794,1.35004500046361,1.35096360967266,2.26571204492102,1.55328093525546,0,0.399024873401031,1.70733605754134,0.243106717068294,0.209613162627982,0.551530525350042,0.666740183404846,0.412070114477788,0,0.252697211763798,1.01391719956096,0.377252682772152,0.280924522409647,0.0640251524048693,0.17230640686684,0,0.463537303779422,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.376437521661322,0.423073039458382,0.73171189149109,0.263069711437843,0.135804113845862,0.561142271657738,0.355905054372522,0.591026894253381,0,0.77468420592983,0,0.499621155875892,0.233931608445408,0.214871054048298,0,0.441182838239031,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24864567805155,3.70293685490423,3.1691570175309,0,0,0,0,0,0,0,1.03689612308478,0.405017814995072,0.841299845405528,4.57041575046086,2.87129103237098,1.46988959057945,0.958454710182364,0,8.8092704799511,3.57524546638526,2.15049146558741,2.50583946687368,2.8361169516747,1.56274011167028,1.11673199600552,4.50210088025344,2.90316670775939,4.71405736757868,4.41352210477219,5.96478226640962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,2.39665023047716,3.20250421973039,1.00523481690292,1.73824320192276,0.767146371990992,4.1557608911912,1.94689515681309,0.101839363850316,0,0,0,0,0,0.360124259610698,0,0.136072998302656,0,0,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,1.87538698547525,0,0,0,0,0,0,0,0,0,0,0,3.85585579706168,0,0,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,4.14292712856459,3.43737308063638,1.89038500578056,1.37016503954128,1.5107877947794,1.35004500046361,1.35096360967266,2.26571204492102,1.55328093525546,0,0.399024873401031,1.70733605754134,0.243106717068294,0.209613162627982,0.551530525350042,0.666740183404846,0.412070114477788,0,0.252697211763798,1.01391719956096,0.377252682772152,0.280924522409647,0.0640251524048693,0.17230640686684,0,0.463537303779422,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.376437521661322,0.423073039458382,0.73171189149109,0.263069711437843,0.135804113845862,0.561142271657738,0.355905054372522,0.591026894253381,0,0.77468420592983,0,0.499621155875892,0.233931608445408,0.214871054048298,0,0.441182838239031,0.231867835620421 | ||
|short_description=p5@Nxph1 | |short_description=p5@Nxph1 | ||
}} | }} |
Latest revision as of 21:34, 1 October 2015
Short description: | p5@Nxph1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Nxph1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000060369_5end |
EntrezGene: | Nxph1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.92e-33 | 23 |
neuroblast (sensu Vertebrata) | 7.92e-33 | 23 |
neuron | 2.05e-21 | 33 |
neuronal stem cell | 2.05e-21 | 33 |
neuroblast | 2.05e-21 | 33 |
electrically signaling cell | 2.05e-21 | 33 |
electrically responsive cell | 2.19e-17 | 39 |
electrically active cell | 2.19e-17 | 39 |
neural cell | 2.51e-15 | 43 |
ectodermal cell | 7.16e-15 | 44 |
neurectodermal cell | 7.16e-15 | 44 |
neuron of the ventral spinal cord | 1.62e-08 | 3 |
granule cell | 5.63e-08 | 3 |
raphe nuclei neuron | 6.26e-08 | 3 |
embryonic cell | 1.17e-07 | 70 |
neuron of the substantia nigra | 2.06e-07 | 3 |
striatum neuron | 3.08e-07 | 3 |