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FFCP PHASE1:Mm9::chr2:11093956..11093977,+: Difference between revisions

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(Created page with "{{FFCP |id=chr2:11093956..11093977,+ |short_description=p8@Prkcq |description=CAGE_peak_8_at_Prkcq_5end |association_with_transcript=19bp_to_ENSMUST00000102970_5end |Entr...")
 
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{{FFCP
{{FFCP
|id=chr2:11093956..11093977,+
|DHSsupport=NA
|short_description=p8@Prkcq
|DPIdataset=NA
|description=CAGE_peak_8_at_Prkcq_5end
|association_with_transcript=19bp_to_ENSMUST00000102970_5end
|EntrezGene=18761
|EntrezGene=18761
|HGNC=
|HGNC=
|MCL_coexpression_id=21
|TSSclassifier=NA
|UniProt=Q8CAV6
|UniProt=Q8CAV6
|association_with_transcript=19bp_to_ENSMUST00000102970_5end
|cluster_id=chr2:11093956..11093977,+
|description=CAGE_peak_8_at_Prkcq_5end
|id=chr2:11093956..11093977,+
|ontology_enrichment_celltype=CL:0000791!3.99e-08!9;CL:0000789!3.99e-08!9;CL:0002420!3.99e-08!9;CL:0002419!3.99e-08!9;CL:0000790!3.99e-08!9;CL:0000624!2.25e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000791,3.31e-22,9;CL:0000789,3.31e-22,9;CL:0002420,3.31e-22,9;CL:0002419,3.31e-22,9;CL:0000790,3.31e-22,9;CL:0000624,7.52e-20,8;CL:0000084,8.13e-18,11;CL:0000827,8.13e-18,11;CL:0000838,3.60e-16,12;CL:0000893,4.57e-15,6;CL:0002489,4.57e-15,6;CL:0000898,4.57e-15,6;CL:0000809,4.57e-15,6;CL:0000810,4.57e-15,6;CL:0000895,4.57e-15,6;CL:0000808,4.57e-15,6;CL:0000894,4.57e-15,6;CL:0000806,4.57e-15,6;CL:0000807,4.57e-15,6;CL:0000805,4.57e-15,6;CL:0002425,4.57e-15,6;CL:0002436,4.57e-15,6;CL:0002427,4.57e-15,6;CL:0002428,4.57e-15,6;CL:0002429,4.57e-15,6;CL:0002433,4.57e-15,6;CL:0002431,4.57e-15,6;CL:0002432,4.57e-15,6;CL:0000542,8.90e-15,13;CL:0000051,8.90e-15,13;CL:0002031,8.43e-12,25;CL:0000738,7.54e-11,17;CL:0002087,7.54e-11,17;CL:0000988,1.26e-08,32;CL:0002032,1.26e-08,32;CL:0000037,1.26e-08,32;CL:0000837,1.26e-08,32;CL:0002320,2.23e-07,46;CL:0000134,2.23e-07,46;CL:0000219,9.26e-07,54
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0006562!1.38e-08!24;UBERON:0001557!1.38e-08!24;UBERON:0001042!1.38e-08!24;UBERON:0008814!1.38e-08!24;UBERON:0009145!1.38e-08!24;UBERON:0003408!2.80e-08!24;UBERON:0002370!5.81e-08!23;UBERON:0000974!5.81e-08!23;UBERON:0004807!5.81e-08!23;UBERON:0005058!5.81e-08!23;UBERON:0003351!5.81e-08!23;UBERON:0009113!5.81e-08!23;UBERON:0003295!5.81e-08!23;UBERON:0009722!5.81e-08!23;UBERON:0005562!5.81e-08!23;UBERON:0007690!5.81e-08!23;UBERON:0001004!3.06e-07!42;UBERON:0000065!6.01e-07!41;UBERON:0004177!7.37e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0006562,7.88e-17,24;UBERON:0001557,7.88e-17,24;UBERON:0001042,7.88e-17,24;UBERON:0008814,7.88e-17,24;UBERON:0009145,7.88e-17,24;UBERON:0002370,4.37e-15,23;UBERON:0000974,4.37e-15,23;UBERON:0004807,4.37e-15,23;UBERON:0005058,4.37e-15,23;UBERON:0003351,4.37e-15,23;UBERON:0009113,4.37e-15,23;UBERON:0003295,4.37e-15,23;UBERON:0009722,4.37e-15,23;UBERON:0005562,4.37e-15,23;UBERON:0007690,4.37e-15,23;UBERON:0000072,1.38e-14,27;UBERON:0003408,2.49e-14,24;UBERON:0007811,1.59e-13,36;UBERON:0004177,3.66e-13,29;UBERON:0005057,3.66e-13,29;UBERON:0000077,4.82e-12,35;UBERON:0002193,8.02e-12,48;UBERON:0002405,8.02e-12,48;UBERON:0002390,3.29e-11,45;UBERON:0003061,3.29e-11,45;UBERON:0000153,1.06e-10,43;UBERON:0000065,1.72e-08,41;UBERON:0001004,3.26e-08,42;UBERON:0002368,1.87e-07,60;UBERON:0003929,1.88e-07,55;UBERON:0002384,2.23e-07,46;UBERON:0001948,4.22e-07,5;UBERON:0002315,4.22e-07,5
|phase1_expression=0.320297694209588,0,0,0,0,0,0,11.6210991097419,2.81577444303333,3.27690336850791,1.71217968225505,1.51567102091139,16.0928686135333,14.9488888136486,0.666219523631325,0.607425802169478,0.699561878128147,1.26184866143295,1.23402990245165,1.27316895539409,0.340173160604279,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,15.2326049822382,10.4189077734164,0,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,1.14260393761521,1.10434270475807,0,0,0,0,0.638436690425939,0.307213066512487,0.131886287730194,0.0914876436024097,0,0.558365998002762,0,0.30559649555362,0.883885756421003,1.42371680799103,1.3047961207771,0.151452386666368,1.13357340160178,1.44932244350839,1.72084775396277,0,0,0,0,0.561777680527007,0,0,0,1.26759077799012,0,0,0,0,0,0,0.79928715803342,5.43769555659061,0.148442139064825,0,0,0.230615497256059,0,0,0.251333182659351,0.247194967734374,0.433798070759735,0,1.29413479957927,0.883366073841574,0.969750506270444,0,0.292780797011547,0.41889341362691,0,0.599075622529601,0,0.127070227073065,0.449371918214468,0.457500602818626,0.125654352112864,0,0.255715457330331,1.0389402227978,0.973447578406546,0,0.746441823660558,0,0.420883711772948,0.260240885925407,0.459804208866946,0.720248519221397,0.150704817835715,0.0680364991513279,0.384341160854549,0.468508622798644,1.81092359517311,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.164167464079095,0.324275238183423,0.146199987425332,0,0.268412837520744,0.210289948564127,0,0.330418782983798,0.264450566663544,0,0.232236671860439,0,0.201683524623343,0,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0,0,0,0,0.189667900953082,0.228497025219458,0,0.407302655690628,0.387904974335251,0.280543279561274,0.885311519739602,0.295220295959204,1.41298855057237,0.493588655687202,0.592905254174298,0.333690211432188,0.393117990226406,0,0.202860121388503,0,1.01850340712568,0.287696137450811,0.162135226775035,0.549122826376163,0,0,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,0.923765950833023,0,0.488894929326078,0,0,0,0.238043640886014,0.390267295715598,0.630540576424764,0.221464689648775,0.797273843287435,0.81931657357869,0.518054945597687,0.867894351489069,0,0,0,0.275936746304732,0.80275294993896,1.28932855251423,0,2.7771801992481,0.94652465824877,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,1.03135543248187,1.02131881726136,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0.65954501176592,0,0.301564624640779,0.119372344003136,0.820704498725306,0,0.741701208042039,1.19609616558497,0,0,0,0.820165366326151,0.228778173206523,0.509935289981566,0,0.138199973804424,0.954670618015114,0.158167996790568,0,0,0,0,0.269728692769641,0,0.26175594198403,0,0.621339313086926,0,0,0,0.194451188344048,0.258319646955462,0,0,0,0.209718688851422,0,0,1.89606672376907,0.810900861160657,1.1298205288131,0.389762468933385,0.358053391334963,0.198681354781265,0.480781798079875,1.03382669022204,0.302899349844443,1.37172251979,0.604957110821043,2.53390489923356,1.53938946624527,2.68816875017609,1.81384306892169,0,0,0,0.386379188064381,0.375364950902364,0,0.214368379079066,0,0.564751842617067,0,0,0.68741272937475,0,0,1.35004500046361,0,0,0.51776031175182,0,0,0,0,0,0,0.666740183404846,0,0.320919209591815,0.758091635291392,0,0.188626341386076,0.280924522409647,0.448176066834085,0.287177344778066,0.952587382566147,0.231768651889711,0.578727661391115,0,0.588795680537589,0.685738504770831,0.354951612318675,0.238436189947321,0.581385666529314,0.470546902076653,0.25384382367503,0.365855945745545,0.526139422875686,0.407412341537585,0,0.474540072496697,0.591026894253381,0.409231043169689,0.309873682371932,0.192906610981141,0,0.701794825336225,0.644613162144895,0.956441660344217,0.661774257358546,0.927471342481686
|phase1_expression=0.320297694209588,0,0,0,0,0,0,11.6210991097419,2.81577444303333,3.27690336850791,1.71217968225505,1.51567102091139,16.0928686135333,14.9488888136486,0.666219523631325,0.607425802169478,0.699561878128147,1.26184866143295,1.23402990245165,1.27316895539409,0.340173160604279,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,15.2326049822382,10.4189077734164,0,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,1.14260393761521,1.10434270475807,0,0,0,0,0.638436690425939,0.307213066512487,0.131886287730194,0.0914876436024097,0,0.558365998002762,0,0.30559649555362,0.883885756421003,1.42371680799103,1.3047961207771,0.151452386666368,1.13357340160178,1.44932244350839,1.72084775396277,0,0,0,0,0.561777680527007,0,0,0,1.26759077799012,0,0,0,0,0,0,0.79928715803342,5.43769555659061,0.148442139064825,0,0,0.230615497256059,0,0,0.251333182659351,0.247194967734374,0.433798070759735,0,1.29413479957927,0.883366073841574,0.969750506270444,0,0.292780797011547,0.41889341362691,0,0.599075622529601,0,0.127070227073065,0.449371918214468,0.457500602818626,0.125654352112864,0,0.255715457330331,1.0389402227978,0.973447578406546,0,0.746441823660558,0,0.420883711772948,0.260240885925407,0.459804208866946,0.720248519221397,0.150704817835715,0.0680364991513279,0.384341160854549,0.468508622798644,1.81092359517311,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.164167464079095,0.324275238183423,0.146199987425332,0,0.268412837520744,0.210289948564127,0,0.330418782983798,0.264450566663544,0,0.232236671860439,0,0.201683524623343,0,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0,0,0,0,0.189667900953082,0.228497025219458,0,0.407302655690628,0.387904974335251,0.280543279561274,0.885311519739602,0.295220295959204,1.41298855057237,0.493588655687202,0.592905254174298,0.333690211432188,0.393117990226406,0,0.202860121388503,0,1.01850340712568,0.287696137450811,0.162135226775035,0.549122826376163,0,0,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,0.923765950833023,0,0.488894929326078,0,0,0,0.238043640886014,0.390267295715598,0.630540576424764,0.221464689648775,0.797273843287435,0.81931657357869,0.518054945597687,0.867894351489069,0,0,0,0.275936746304732,0.80275294993896,1.28932855251423,0,2.7771801992481,0.94652465824877,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,1.03135543248187,1.02131881726136,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0.65954501176592,0,0.301564624640779,0.119372344003136,0.820704498725306,0,0.741701208042039,1.19609616558497,0,0,0,0.820165366326151,0.228778173206523,0.509935289981566,0,0.138199973804424,0.954670618015114,0.158167996790568,0,0,0,0,0.269728692769641,0,0.26175594198403,0,0.621339313086926,0,0,0,0.194451188344048,0.258319646955462,0,0,0,0.209718688851422,0,0,1.89606672376907,0.810900861160657,1.1298205288131,0.389762468933385,0.358053391334963,0.198681354781265,0.480781798079875,1.03382669022204,0.302899349844443,1.37172251979,0.604957110821043,2.53390489923356,1.53938946624527,2.68816875017609,1.81384306892169,0,0,0,0.386379188064381,0.375364950902364,0,0.214368379079066,0,0.564751842617067,0,0,0.68741272937475,0,0,1.35004500046361,0,0,0.51776031175182,0,0,0,0,0,0,0.666740183404846,0,0.320919209591815,0.758091635291392,0,0.188626341386076,0.280924522409647,0.448176066834085,0.287177344778066,0.952587382566147,0.231768651889711,0.578727661391115,0,0.588795680537589,0.685738504770831,0.354951612318675,0.238436189947321,0.581385666529314,0.470546902076653,0.25384382367503,0.365855945745545,0.526139422875686,0.407412341537585,0,0.474540072496697,0.591026894253381,0.409231043169689,0.309873682371932,0.192906610981141,0,0.701794825336225,0.644613162144895,0.956441660344217,0.661774257358546,0.927471342481686
|short_description=p8@Prkcq
}}
}}

Latest revision as of 23:03, 1 October 2015

Short description:p8@Prkcq
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Prkcq_5end
Coexpression cluster:MCL_coexpression_mm9:21
Association with transcript: 19bp_to_ENSMUST00000102970_5end
EntrezGene:Prkcq
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Prkcq

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E911.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.82
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.52
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E416.09
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E814.95
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.23
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.42
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F91.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H95.44
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D31.37
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A22.53
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G22.69
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell3.31e-229
alpha-beta T cell3.31e-229
immature T cell3.31e-229
mature T cell3.31e-229
immature alpha-beta T cell3.31e-229
CD4-positive, alpha-beta T cell7.52e-208
T cell8.13e-1811
pro-T cell8.13e-1811
lymphoid lineage restricted progenitor cell3.60e-1612
thymocyte4.57e-156
double negative thymocyte4.57e-156
naive T cell4.57e-156
double-positive, alpha-beta thymocyte4.57e-156
CD4-positive, alpha-beta thymocyte4.57e-156
naive thymus-derived CD4-positive, alpha-beta T cell4.57e-156
DN4 thymocyte4.57e-156
DN1 thymic pro-T cell4.57e-156
DN2 thymocyte4.57e-156
DN3 thymocyte4.57e-156
immature single positive thymocyte4.57e-156
early T lineage precursor4.57e-156
mature CD4 single-positive thymocyte4.57e-156
resting double-positive thymocyte4.57e-156
double-positive blast4.57e-156
CD69-positive double-positive thymocyte4.57e-156
CD69-positive, CD4-positive single-positive thymocyte4.57e-156
CD4-positive, CD8-intermediate double-positive thymocyte4.57e-156
CD24-positive, CD4 single-positive thymocyte4.57e-156
lymphocyte8.90e-1513
common lymphoid progenitor8.90e-1513
hematopoietic lineage restricted progenitor cell8.43e-1225
leukocyte7.54e-1117
nongranular leukocyte7.54e-1117
hematopoietic cell1.26e-0832
hematopoietic oligopotent progenitor cell1.26e-0832
hematopoietic stem cell1.26e-0832
hematopoietic multipotent progenitor cell1.26e-0832
connective tissue cell2.23e-0746
mesenchymal cell2.23e-0746
motile cell9.26e-0754

Uber anatomy
Ontology termp-valuen
pharynx7.88e-1724
upper respiratory tract7.88e-1724
chordate pharynx7.88e-1724
pharyngeal arch system7.88e-1724
pharyngeal region of foregut7.88e-1724
thymus4.37e-1523
neck4.37e-1523
respiratory system epithelium4.37e-1523
hemolymphoid system gland4.37e-1523
pharyngeal epithelium4.37e-1523
thymic region4.37e-1523
pharyngeal gland4.37e-1523
entire pharyngeal arch endoderm4.37e-1523
thymus primordium4.37e-1523
early pharyngeal endoderm4.37e-1523
segment of respiratory tract1.38e-1427
gland of gut2.49e-1424
craniocervical region1.59e-1336
hemopoietic organ3.66e-1329
immune organ3.66e-1329
mixed endoderm/mesoderm-derived structure4.82e-1235
hemolymphoid system8.02e-1248
immune system8.02e-1248
hematopoietic system3.29e-1145
blood island3.29e-1145
anterior region of body1.06e-1043
respiratory tract1.72e-0841
respiratory system3.26e-0842
endocrine gland1.87e-0760
gut epithelium1.88e-0755
connective tissue2.23e-0746
regional part of spinal cord4.22e-075
gray matter of spinal cord4.22e-075
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