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FFCP PHASE1:Mm9::chrX:70070500..70070522,+: Difference between revisions

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(Created page with "{{FFCP |id=chrX:70070500..70070522,+ |short_description=p2@Gabrq |description=CAGE_peak_2_at_Gabrq_5end |association_with_transcript=0bp_to_ENSMUST00000114553_5end |Entre...")
 
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{{FFCP
{{FFCP
|id=chrX:70070500..70070522,+
|DHSsupport=NA
|short_description=p2@Gabrq
|DPIdataset=NA
|description=CAGE_peak_2_at_Gabrq_5end
|association_with_transcript=0bp_to_ENSMUST00000114553_5end
|EntrezGene=57249
|EntrezGene=57249
|HGNC=
|HGNC=
|MCL_coexpression_id=159
|TSSclassifier=NA
|UniProt=B1AUQ5
|UniProt=B1AUQ5
|association_with_transcript=0bp_to_ENSMUST00000114553_5end
|cluster_id=chrX:70070500..70070522,+
|description=CAGE_peak_2_at_Gabrq_5end
|id=chrX:70070500..70070522,+
|ontology_enrichment_celltype=CL:0000117!1.74e-13!23;CL:0000337!1.74e-13!23;CL:0000540!6.70e-08!33;CL:0000047!6.70e-08!33;CL:0000031!6.70e-08!33;CL:0000404!6.70e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,5.62e-26,23;CL:0000337,5.62e-26,23;CL:0000540,9.53e-17,33;CL:0000047,9.53e-17,33;CL:0000031,9.53e-17,33;CL:0000404,9.53e-17,33;CL:0000393,1.70e-13,39;CL:0000211,1.70e-13,39;CL:0000221,6.37e-13,44;CL:0000133,6.37e-13,44;CL:0002319,7.74e-12,43;CL:0002614,2.52e-08,3;CL:0002610,6.49e-08,3;CL:0002612,1.08e-07,3;CL:0002613,1.98e-07,3;CL:0000120,3.94e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.72e-19!71;UBERON:0003075!1.72e-19!71;UBERON:0007284!1.72e-19!71;UBERON:0000033!5.48e-19!63;UBERON:0001049!5.42e-18!52;UBERON:0005068!5.42e-18!52;UBERON:0006241!5.42e-18!52;UBERON:0007135!5.42e-18!52;UBERON:0003056!8.36e-17!49;UBERON:0000955!4.84e-16!50;UBERON:0006238!4.84e-16!50;UBERON:0002616!6.53e-16!49;UBERON:0001017!2.54e-15!73;UBERON:0005743!2.54e-15!73;UBERON:0002020!4.35e-15!34;UBERON:0000073!2.74e-14!75;UBERON:0001016!2.74e-14!75;UBERON:0004121!8.97e-14!102;UBERON:0000924!8.97e-14!102;UBERON:0006601!8.97e-14!102;UBERON:0003080!1.24e-13!40;UBERON:0002780!6.66e-13!39;UBERON:0001890!6.66e-13!39;UBERON:0006240!6.66e-13!39;UBERON:0002791!1.74e-11!29;UBERON:0003528!1.74e-11!29;UBERON:0001893!1.74e-11!29;UBERON:0007811!6.18e-09!86;UBERON:0000153!2.11e-08!94;UBERON:0002420!3.55e-07!8;UBERON:0007245!3.55e-07!8;UBERON:0010009!3.55e-07!8;UBERON:0010011!3.55e-07!8;UBERON:0000454!3.55e-07!8;UBERON:0002619!8.51e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.44e-28,54;UBERON:0001017,3.81e-26,73;UBERON:0001016,3.07e-25,75;UBERON:0001049,8.36e-25,52;UBERON:0005068,8.36e-25,52;UBERON:0006241,8.36e-25,52;UBERON:0007135,8.36e-25,52;UBERON:0002020,2.43e-23,34;UBERON:0004121,5.13e-21,95;UBERON:0000924,5.13e-21,95;UBERON:0006601,5.13e-21,95;UBERON:0002346,1.87e-20,64;UBERON:0003075,1.87e-20,64;UBERON:0007284,1.87e-20,64;UBERON:0010371,1.54e-18,73;UBERON:0002420,2.55e-17,8;UBERON:0007245,2.55e-17,8;UBERON:0010009,2.55e-17,8;UBERON:0010011,2.55e-17,8;UBERON:0000454,2.55e-17,8;UBERON:0002616,8.39e-16,46;UBERON:0000955,2.35e-15,47;UBERON:0006238,2.35e-15,47;UBERON:0003528,5.52e-15,29;UBERON:0002791,5.52e-15,29;UBERON:0001893,5.52e-15,29;UBERON:0003080,6.02e-15,40;UBERON:0002240,1.04e-13,6;UBERON:0005174,1.04e-13,6;UBERON:0001137,1.04e-13,6;UBERON:0002780,1.72e-13,39;UBERON:0001890,1.72e-13,39;UBERON:0006240,1.72e-13,39;UBERON:0010314,2.90e-13,92;UBERON:0003056,1.11e-12,49;UBERON:0001948,6.80e-12,5;UBERON:0002315,6.80e-12,5;UBERON:0003076,2.85e-11,12;UBERON:0003057,2.85e-11,12;UBERON:0000369,1.24e-10,5;UBERON:0002435,1.24e-10,5;UBERON:0000204,1.24e-10,5;UBERON:0010082,1.24e-10,5;UBERON:0002950,1.55e-10,4;UBERON:0001891,1.55e-10,4;UBERON:0009616,1.55e-10,4;UBERON:0010286,1.55e-10,4;UBERON:0002038,2.52e-08,3;UBERON:0009663,2.52e-08,3;UBERON:0009661,2.52e-08,3;UBERON:0000125,2.52e-08,3;UBERON:0002308,2.52e-08,3;UBERON:0004684,6.49e-08,3;UBERON:0002275,6.49e-08,3;UBERON:0000025,9.32e-08,114;UBERON:0002257,1.08e-07,3;UBERON:0004111,1.43e-07,122;UBERON:0011216,6.43e-07,194
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,2.83243045203437,6.87688273053643,2.53532561402472,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,8.56952953211411,7.95126747425809,0.857435594504678,0.958454710182364,0.919218786610021,8.8092704799511,5.2351808614927,9.06278546211836,5.53922408466814,4.7573574673253,4.68822033501084,8.93385596804419,14.069065250792,12.835052813252,10.606629077052,8.11518580554887,2.79599168737951,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,1.54927761754349,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0.173485326766136,0.608930956624282,0,0,0.117588707135705,0.251333182659351,0,0.722996784599558,0,0.161766849947409,0,0,0,0,0.41889341362691,0.510914110417183,0,0,0,10.1857634795279,3.66000482254901,1.13088916901578,1.91206752211504,0,7.06479351502504,4.38051410282946,0.305518091550949,0.248813941220186,0,0.420883711772948,0.390361328888111,0.919608417733892,0.540186389416048,0.753524089178575,1.15662048557257,0.512454881139399,0.843315521037559,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0.834141747676794,0,0.61734640922383,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0.292399974850665,0,0.402619256281115,0.630869845692382,1.13195073617213,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,0,0.482354319504834,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.189491411770485,0,0.339490171550376,0.704070744865506,0.335012514883631,0.238043640886014,0.390267295715598,0.472905432318573,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,5.13761887960934,6.44664276257117,0,0.504941854408746,0,0,0.430846795465598,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0.534196811001766,0.325773918707152,0.329940245945071,3.98235415019888,0,0,0.565815239267694,0,0.614870295887855,0,0.363533729477506,0,0,0,0,0.340439605753788,0.36012218806262,0.258717367565509,0,0.354680467284547,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0.291480836629851,3.70850604021019,0.683483523191411,4.33412422722767,2.59272338317596,0.941842285023455,0.956859594047176,0.686334519619568,0,0,0,0,0,0.406638934253697,0,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0.149516546043979,0,0.777804753376191,0.387479470433193,0,0.117357238645754,0,0,0,0.288030006257865,0.316011120628178,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,2.25900737046827,2.30162618253588,1.71868654031819,1.3748254587495,2.05524755931193,0,1.35004500046361,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0,0.853668028770671,0.486213434136588,0.838452650511929,0.735374033800057,0.888986911206461,1.44224540067226,0.962757628775446,0.505394423527595,1.52087579934144,0.377252682772152,0.561849044819294,0.384150914429216,0.402048282689293,0.476293691283074,0.463537303779422,0.578727661391115,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.752875043322645,0.761531471025089,0.73171189149109,0.263069711437843,0.950628796921032,1.12228454331548,0.355905054372522,0.29551344712669,1.63692417267876,0.464810523557898,0.192906610981141,0.749431733813838,0.701794825336225,0.859484216193193,0.57386499620653,0.441182838239031,0.231867835620421
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,2.83243045203437,6.87688273053643,2.53532561402472,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,8.56952953211411,7.95126747425809,0.857435594504678,0.958454710182364,0.919218786610021,8.8092704799511,5.2351808614927,9.06278546211836,5.53922408466814,4.7573574673253,4.68822033501084,8.93385596804419,14.069065250792,12.835052813252,10.606629077052,8.11518580554887,2.79599168737951,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,1.54927761754349,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0.173485326766136,0.608930956624282,0,0,0.117588707135705,0.251333182659351,0,0.722996784599558,0,0.161766849947409,0,0,0,0,0.41889341362691,0.510914110417183,0,0,0,10.1857634795279,3.66000482254901,1.13088916901578,1.91206752211504,0,7.06479351502504,4.38051410282946,0.305518091550949,0.248813941220186,0,0.420883711772948,0.390361328888111,0.919608417733892,0.540186389416048,0.753524089178575,1.15662048557257,0.512454881139399,0.843315521037559,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0.834141747676794,0,0.61734640922383,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0.292399974850665,0,0.402619256281115,0.630869845692382,1.13195073617213,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,0,0.482354319504834,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.189491411770485,0,0.339490171550376,0.704070744865506,0.335012514883631,0.238043640886014,0.390267295715598,0.472905432318573,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,5.13761887960934,6.44664276257117,0,0.504941854408746,0,0,0.430846795465598,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0.534196811001766,0.325773918707152,0.329940245945071,3.98235415019888,0,0,0.565815239267694,0,0.614870295887855,0,0.363533729477506,0,0,0,0,0.340439605753788,0.36012218806262,0.258717367565509,0,0.354680467284547,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0.291480836629851,3.70850604021019,0.683483523191411,4.33412422722767,2.59272338317596,0.941842285023455,0.956859594047176,0.686334519619568,0,0,0,0,0,0.406638934253697,0,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0.149516546043979,0,0.777804753376191,0.387479470433193,0,0.117357238645754,0,0,0,0.288030006257865,0.316011120628178,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,2.25900737046827,2.30162618253588,1.71868654031819,1.3748254587495,2.05524755931193,0,1.35004500046361,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0,0.853668028770671,0.486213434136588,0.838452650511929,0.735374033800057,0.888986911206461,1.44224540067226,0.962757628775446,0.505394423527595,1.52087579934144,0.377252682772152,0.561849044819294,0.384150914429216,0.402048282689293,0.476293691283074,0.463537303779422,0.578727661391115,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.752875043322645,0.761531471025089,0.73171189149109,0.263069711437843,0.950628796921032,1.12228454331548,0.355905054372522,0.29551344712669,1.63692417267876,0.464810523557898,0.192906610981141,0.749431733813838,0.701794825336225,0.859484216193193,0.57386499620653,0.441182838239031,0.231867835620421
|short_description=p2@Gabrq
}}
}}

Latest revision as of 23:24, 1 October 2015

Short description:p2@Gabrq
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gabrq_5end
Coexpression cluster:MCL_coexpression_mm9:159
Association with transcript: 0bp_to_ENSMUST00000114553_5end
EntrezGene:Gabrq
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gabrq

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.95
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.54
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.76
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.93
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.19
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F27.06
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.14
medulla oblongata, neonate N30.CNhs11200.1396-42A36.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C14.33
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.44e-2854
central nervous system3.81e-2673
nervous system3.07e-2575
neural tube8.36e-2552
neural rod8.36e-2552
future spinal cord8.36e-2552
neural keel8.36e-2552
gray matter2.43e-2334
ectoderm-derived structure5.13e-2195
ectoderm5.13e-2195
presumptive ectoderm5.13e-2195
neurectoderm1.87e-2064
neural plate1.87e-2064
presumptive neural plate1.87e-2064
ecto-epithelium1.54e-1873
basal ganglion2.55e-178
nuclear complex of neuraxis2.55e-178
aggregate regional part of brain2.55e-178
collection of basal ganglia2.55e-178
cerebral subcortex2.55e-178
regional part of brain8.39e-1646
brain2.35e-1547
future brain2.35e-1547
brain grey matter5.52e-1529
regional part of telencephalon5.52e-1529
telencephalon5.52e-1529
anterior neural tube6.02e-1540
spinal cord1.04e-136
dorsal region element1.04e-136
dorsum1.04e-136
regional part of forebrain1.72e-1339
forebrain1.72e-1339
future forebrain1.72e-1339
structure with developmental contribution from neural crest2.90e-1392
pre-chordal neural plate1.11e-1249
regional part of spinal cord6.80e-125
gray matter of spinal cord6.80e-125
posterior neural tube2.85e-1112
chordal neural plate2.85e-1112
corpus striatum1.24e-105
striatum1.24e-105
ventral part of telencephalon1.24e-105
future corpus striatum1.24e-105
regional part of midbrain1.55e-104
midbrain1.55e-104
presumptive midbrain1.55e-104
midbrain neural tube1.55e-104
substantia nigra2.52e-083
telencephalic nucleus2.52e-083
midbrain nucleus2.52e-083
neural nucleus2.52e-083
nucleus of brain2.52e-083
raphe nuclei6.49e-083
reticular formation6.49e-083
tube9.32e-08114
ventral horn of spinal cord1.08e-073
anatomical conduit1.43e-07122
organ system subdivision6.43e-07194
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