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FFCP PHASE1:Mm9::chr11:68947637..68947666,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr11:68947637..68947666,+
|DHSsupport=NA
|short_description=p3@Aloxe3
|DPIdataset=NA
|description=CAGE_peak_3_at_Aloxe3_5end
|association_with_transcript=-152bp_to_ENSMUST00000156874_5end
|EntrezGene=23801
|EntrezGene=23801
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-152bp_to_ENSMUST00000156874_5end
|cluster_id=chr11:68947637..68947666,+
|description=CAGE_peak_3_at_Aloxe3_5end
|id=chr11:68947637..68947666,+
|ontology_enrichment_celltype=CL:0000117!5.55e-11!23;CL:0000337!5.55e-11!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.35e-18,23;CL:0000337,3.35e-18,23;CL:0000540,2.65e-11,33;CL:0000047,2.65e-11,33;CL:0000031,2.65e-11,33;CL:0000404,2.65e-11,33;CL:0000393,6.78e-09,39;CL:0000211,6.78e-09,39;CL:0000221,2.19e-08,44;CL:0000133,2.19e-08,44;CL:0002319,1.12e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.00e-22!52;UBERON:0005068!3.00e-22!52;UBERON:0006241!3.00e-22!52;UBERON:0007135!3.00e-22!52;UBERON:0000033!1.38e-20!63;UBERON:0000955!1.87e-20!50;UBERON:0006238!1.87e-20!50;UBERON:0002616!5.25e-20!49;UBERON:0003080!4.30e-18!40;UBERON:0003056!7.34e-18!49;UBERON:0002780!1.54e-17!39;UBERON:0001890!1.54e-17!39;UBERON:0006240!1.54e-17!39;UBERON:0002346!1.64e-17!71;UBERON:0003075!1.64e-17!71;UBERON:0007284!1.64e-17!71;UBERON:0002020!4.27e-17!34;UBERON:0001017!4.62e-17!73;UBERON:0005743!4.62e-17!73;UBERON:0000073!7.67e-16!75;UBERON:0001016!7.67e-16!75;UBERON:0004121!1.49e-14!102;UBERON:0000924!1.49e-14!102;UBERON:0006601!1.49e-14!102;UBERON:0002791!1.51e-13!29;UBERON:0003528!1.51e-13!29;UBERON:0001893!1.51e-13!29;UBERON:0000153!2.21e-13!94;UBERON:0007811!2.54e-13!86;UBERON:0002619!3.41e-09!17;UBERON:0000956!1.09e-08!21;UBERON:0001869!1.09e-08!21;UBERON:0000203!1.09e-08!21;UBERON:0002021!5.50e-08!10;UBERON:0000411!5.50e-08!10;UBERON:0001950!5.50e-08!10;UBERON:0004111!8.39e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.46e-39,54;UBERON:0001049,2.72e-36,52;UBERON:0005068,2.72e-36,52;UBERON:0006241,2.72e-36,52;UBERON:0007135,2.72e-36,52;UBERON:0002020,5.98e-33,34;UBERON:0001017,1.78e-31,73;UBERON:0001016,2.36e-30,75;UBERON:0002346,1.73e-29,64;UBERON:0003075,1.73e-29,64;UBERON:0007284,1.73e-29,64;UBERON:0003080,8.72e-28,40;UBERON:0002616,3.12e-27,46;UBERON:0002780,1.48e-26,39;UBERON:0001890,1.48e-26,39;UBERON:0006240,1.48e-26,39;UBERON:0000955,1.79e-26,47;UBERON:0006238,1.79e-26,47;UBERON:0010371,3.81e-26,73;UBERON:0003528,1.07e-24,29;UBERON:0002791,1.07e-24,29;UBERON:0001893,1.07e-24,29;UBERON:0004121,1.88e-24,95;UBERON:0000924,1.88e-24,95;UBERON:0006601,1.88e-24,95;UBERON:0003056,4.95e-23,49;UBERON:0010314,1.13e-18,92;UBERON:0002021,3.68e-17,10;UBERON:0000411,3.68e-17,10;UBERON:0001950,3.68e-17,10;UBERON:0002619,4.35e-15,17;UBERON:0004111,7.31e-15,122;UBERON:0000956,1.22e-13,21;UBERON:0001869,1.22e-13,21;UBERON:0000203,1.22e-13,21;UBERON:0000025,2.81e-13,114;UBERON:0002420,2.94e-13,8;UBERON:0007245,2.94e-13,8;UBERON:0010009,2.94e-13,8;UBERON:0010011,2.94e-13,8;UBERON:0000454,2.94e-13,8;UBERON:0002240,6.40e-11,6;UBERON:0005174,6.40e-11,6;UBERON:0001137,6.40e-11,6;UBERON:0001948,6.69e-10,5;UBERON:0002315,6.69e-10,5;UBERON:0000369,6.01e-09,5;UBERON:0002435,6.01e-09,5;UBERON:0000204,6.01e-09,5;UBERON:0010082,6.01e-09,5;UBERON:0003076,1.29e-08,12;UBERON:0003057,1.29e-08,12;UBERON:0000483,2.87e-07,174;UBERON:0011216,3.25e-07,194;UBERON:0000119,4.50e-07,176;UBERON:0002950,4.55e-07,4;UBERON:0001891,4.55e-07,4;UBERON:0009616,4.55e-07,4;UBERON:0010286,4.55e-07,4
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,1.26766280701236,0.338844532069132,0.889294796111139,0,0.988866362566974,0,0,0.384218305321555,0.207379224616955,0.405017814995072,0,2.85650984403804,4.63823935998388,0.489963196859816,0.670918297127655,1.83843757322004,2.20231761998777,2.042997409363,2.15049146558741,1.71452174049252,1.37231465403614,2.6045668527838,2.79182999001381,2.25105044012672,1.37518422999129,4.12480019663135,4.41352210477219,1.86399445825301,0,0,1.44932244350839,0,0,0,0,0,0,0,0.259786004602869,0,1.12674735821344,0,0,0,0.216491041011214,0,0.505524445014783,0.11418387971906,0.258937883647172,0.593768556259299,0,0,0,0,0.470354828542819,0.251333182659351,0,0,0,0.161766849947409,0,0,0,2.63502717310392,1.67557365450764,0,0,0,0,1.3481157546434,2.28750301409313,5.02617408451458,2.43354048269187,1.27857728665165,1.0389402227978,0.648965052271031,0.712875546952214,0.497627882440372,2.27450482590307,1.68353484709179,0.260240885925407,0.229902104433473,0,0.30140963567143,0.204109497453984,0.640568601424249,0.187403449119458,0.776110112217047,0,0.567318240503458,0.175951124163949,0.43839146485515,0.278047249225598,0,1.02891068203972,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,1.05144974282064,1.44066457330998,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0,0.193952487167626,0.49095073923223,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0.325929952884052,0.169745085775188,0.469380496577004,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0,0,0.481651769963376,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0.567760340833074,0.712262414669021,0.977321756121456,0.824850614862677,1.32745138339963,0.971122544619926,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0.948110273807448,0,0,5.44703369206061,0.18006109403131,1.03486947026204,0.857348140126369,0.532020700926821,0.891844088010353,1.31639216481697,4.26250928760439,0.23467170806371,0.21183207086382,4.41056796109924,0.32977250588296,0.645857706783622,0.361877549568935,0.477489376012546,0.164140899745061,0,1.11255181206306,0,0,0,0,0.136694227721025,0,0.169978429993855,0,0,0,0.158167996790568,0,0.648032044930808,0,0.436725127492355,0.539457385539283,0.41326727862668,0.785267825952089,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0,1.5256441023948,0.781226309063701,1.25831213310853,0.966336483304024,0.864090018773596,0.316011120628178,0.608175645870493,0.718976700153791,0.51968329191118,0.179026695667481,0.198681354781265,0.120195449519969,0,0.302899349844443,0.0762068066549998,0.100826185136841,0,0,0,0.453460767230423,0.221985953374065,0,0.503653849092235,0,0,0.36630324853453,0.428736758158132,4.01257683228291,1.6942555278512,2.76195141904306,1.71868654031819,1.89038500578056,2.74033007908257,3.7769694869485,2.70009000092722,5.40385443869065,3.17199686288943,2.5888015587591,0.103787347584177,0.399024873401031,0.341467211508268,0,0.419226325255965,0.551530525350042,0.222246727801615,0.618105171716683,0.320919209591815,0.505394423527595,0.50695859978048,0.565879024158229,0.561849044819294,0.640251524048693,0.402048282689293,0.476293691283074,0.115884325944855,0,0,0.441596760403192,0.342869252385415,0,0,0.581385666529314,0.376437521661322,0.25384382367503,1.09756783723664,0.526139422875686,0.271608227691724,0.561142271657738,0.355905054372522,0.591026894253381,0,0,0.385813221962283,0.999242311751784,0.233931608445408,1.07435527024149,1.14772999241306,0,0.231867835620421
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,1.26766280701236,0.338844532069132,0.889294796111139,0,0.988866362566974,0,0,0.384218305321555,0.207379224616955,0.405017814995072,0,2.85650984403804,4.63823935998388,0.489963196859816,0.670918297127655,1.83843757322004,2.20231761998777,2.042997409363,2.15049146558741,1.71452174049252,1.37231465403614,2.6045668527838,2.79182999001381,2.25105044012672,1.37518422999129,4.12480019663135,4.41352210477219,1.86399445825301,0,0,1.44932244350839,0,0,0,0,0,0,0,0.259786004602869,0,1.12674735821344,0,0,0,0.216491041011214,0,0.505524445014783,0.11418387971906,0.258937883647172,0.593768556259299,0,0,0,0,0.470354828542819,0.251333182659351,0,0,0,0.161766849947409,0,0,0,2.63502717310392,1.67557365450764,0,0,0,0,1.3481157546434,2.28750301409313,5.02617408451458,2.43354048269187,1.27857728665165,1.0389402227978,0.648965052271031,0.712875546952214,0.497627882440372,2.27450482590307,1.68353484709179,0.260240885925407,0.229902104433473,0,0.30140963567143,0.204109497453984,0.640568601424249,0.187403449119458,0.776110112217047,0,0.567318240503458,0.175951124163949,0.43839146485515,0.278047249225598,0,1.02891068203972,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,1.05144974282064,1.44066457330998,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0,0.193952487167626,0.49095073923223,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0.325929952884052,0.169745085775188,0.469380496577004,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0,0,0.481651769963376,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0.567760340833074,0.712262414669021,0.977321756121456,0.824850614862677,1.32745138339963,0.971122544619926,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0.948110273807448,0,0,5.44703369206061,0.18006109403131,1.03486947026204,0.857348140126369,0.532020700926821,0.891844088010353,1.31639216481697,4.26250928760439,0.23467170806371,0.21183207086382,4.41056796109924,0.32977250588296,0.645857706783622,0.361877549568935,0.477489376012546,0.164140899745061,0,1.11255181206306,0,0,0,0,0.136694227721025,0,0.169978429993855,0,0,0,0.158167996790568,0,0.648032044930808,0,0.436725127492355,0.539457385539283,0.41326727862668,0.785267825952089,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0,1.5256441023948,0.781226309063701,1.25831213310853,0.966336483304024,0.864090018773596,0.316011120628178,0.608175645870493,0.718976700153791,0.51968329191118,0.179026695667481,0.198681354781265,0.120195449519969,0,0.302899349844443,0.0762068066549998,0.100826185136841,0,0,0,0.453460767230423,0.221985953374065,0,0.503653849092235,0,0,0.36630324853453,0.428736758158132,4.01257683228291,1.6942555278512,2.76195141904306,1.71868654031819,1.89038500578056,2.74033007908257,3.7769694869485,2.70009000092722,5.40385443869065,3.17199686288943,2.5888015587591,0.103787347584177,0.399024873401031,0.341467211508268,0,0.419226325255965,0.551530525350042,0.222246727801615,0.618105171716683,0.320919209591815,0.505394423527595,0.50695859978048,0.565879024158229,0.561849044819294,0.640251524048693,0.402048282689293,0.476293691283074,0.115884325944855,0,0,0.441596760403192,0.342869252385415,0,0,0.581385666529314,0.376437521661322,0.25384382367503,1.09756783723664,0.526139422875686,0.271608227691724,0.561142271657738,0.355905054372522,0.591026894253381,0,0,0.385813221962283,0.999242311751784,0.233931608445408,1.07435527024149,1.14772999241306,0,0.231867835620421
|short_description=p3@Aloxe3
}}
}}

Latest revision as of 23:51, 1 October 2015

Short description:p3@Aloxe3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Aloxe3_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -152bp_to_ENSMUST00000156874_5end
EntrezGene:Aloxe3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Aloxe3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F15.03
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F84.41
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.35e-1823
neuroblast (sensu Vertebrata)3.35e-1823
neuron2.65e-1133
neuronal stem cell2.65e-1133
neuroblast2.65e-1133
electrically signaling cell2.65e-1133
electrically responsive cell6.78e-0939
electrically active cell6.78e-0939
ectodermal cell2.19e-0844
neurectodermal cell2.19e-0844
neural cell1.12e-0743

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.46e-3954
neural tube2.72e-3652
neural rod2.72e-3652
future spinal cord2.72e-3652
neural keel2.72e-3652
gray matter5.98e-3334
central nervous system1.78e-3173
nervous system2.36e-3075
neurectoderm1.73e-2964
neural plate1.73e-2964
presumptive neural plate1.73e-2964
anterior neural tube8.72e-2840
regional part of brain3.12e-2746
regional part of forebrain1.48e-2639
forebrain1.48e-2639
future forebrain1.48e-2639
brain1.79e-2647
future brain1.79e-2647
ecto-epithelium3.81e-2673
brain grey matter1.07e-2429
regional part of telencephalon1.07e-2429
telencephalon1.07e-2429
ectoderm-derived structure1.88e-2495
ectoderm1.88e-2495
presumptive ectoderm1.88e-2495
pre-chordal neural plate4.95e-2349
structure with developmental contribution from neural crest1.13e-1892
occipital lobe3.68e-1710
visual cortex3.68e-1710
neocortex3.68e-1710
regional part of cerebral cortex4.35e-1517
anatomical conduit7.31e-15122
cerebral cortex1.22e-1321
cerebral hemisphere1.22e-1321
pallium1.22e-1321
tube2.81e-13114
basal ganglion2.94e-138
nuclear complex of neuraxis2.94e-138
aggregate regional part of brain2.94e-138
collection of basal ganglia2.94e-138
cerebral subcortex2.94e-138
spinal cord6.40e-116
dorsal region element6.40e-116
dorsum6.40e-116
regional part of spinal cord6.69e-105
gray matter of spinal cord6.69e-105
corpus striatum6.01e-095
striatum6.01e-095
ventral part of telencephalon6.01e-095
future corpus striatum6.01e-095
posterior neural tube1.29e-0812
chordal neural plate1.29e-0812
epithelium2.87e-07174
organ system subdivision3.25e-07194
cell layer4.50e-07176
regional part of midbrain4.55e-074
midbrain4.55e-074
presumptive midbrain4.55e-074
midbrain neural tube4.55e-074
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