FF:11487-119E2: Difference between revisions

Revision as of 15:18, 15 May 2017

Name:	Mast cell - stimulated, donor1
Species:	Human (Homo sapiens)
Library ID:	CNhs11073
Sample type:	primary cells
Genomic View:	UCSC
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7, 8, 9, 10
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	skin
dev stage	76 years old adult
sex	female
age	76
cell type	mast cell
cell line	NA
company	NA
collaboration	Sven Guhl (Charite Germany)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00004941

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11073		CAGE		DRX008330		DRR009202

Accession ID Hg19

Library id		BAM		CTSS
CNhs11073		DRZ000627		DRZ002012

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.0451
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.136
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	1.456
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.0949
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.551
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.145
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.168
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.215
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.409
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.287
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.00101
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.174
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.198
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.0333
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.127
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0.597
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11073

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	6.46734e-4
MA0003.1	MA0003.1	0.89
MA0004.1	MA0004.1	0.0476
MA0006.1	MA0006.1	0.642
MA0007.1	MA0007.1	0.058
MA0009.1	MA0009.1	0.38
MA0014.1	MA0014.1	0.958
MA0017.1	MA0017.1	0.24
MA0018.2	MA0018.2	9.07425e-5
MA0019.1	MA0019.1	0.0744
MA0024.1	MA0024.1	0.815
MA0025.1	MA0025.1	0.529
MA0027.1	MA0027.1	0.794
MA0028.1	MA0028.1	5.92924e-7
MA0029.1	MA0029.1	0.0565
MA0030.1	MA0030.1	0.247
MA0031.1	MA0031.1	0.294
MA0035.2	MA0035.2	7.37751e-8
MA0038.1	MA0038.1	0.0127
MA0039.2	MA0039.2	0.198
MA0040.1	MA0040.1	0.22
MA0041.1	MA0041.1	0.121
MA0042.1	MA0042.1	0.49
MA0043.1	MA0043.1	0.0121
MA0046.1	MA0046.1	0.407
MA0047.2	MA0047.2	0.196
MA0048.1	MA0048.1	0.749
MA0050.1	MA0050.1	0.0122
MA0051.1	MA0051.1	0.104
MA0052.1	MA0052.1	0.52
MA0055.1	MA0055.1	0.0804
MA0057.1	MA0057.1	0.679
MA0058.1	MA0058.1	0.114
MA0059.1	MA0059.1	0.995
MA0060.1	MA0060.1	0.433
MA0061.1	MA0061.1	0.154
MA0062.2	MA0062.2	1.45684e-16
MA0065.2	MA0065.2	0.421
MA0066.1	MA0066.1	0.562
MA0067.1	MA0067.1	0.0011
MA0068.1	MA0068.1	0.121
MA0069.1	MA0069.1	0.657
MA0070.1	MA0070.1	0.00289
MA0071.1	MA0071.1	0.57
MA0072.1	MA0072.1	0.549
MA0073.1	MA0073.1	0.399
MA0074.1	MA0074.1	0.781
MA0076.1	MA0076.1	2.82172e-9
MA0077.1	MA0077.1	0.171
MA0078.1	MA0078.1	0.87
MA0079.2	MA0079.2	0.629
MA0080.2	MA0080.2	3.6627e-9
MA0081.1	MA0081.1	1.14301e-4
MA0083.1	MA0083.1	0.599
MA0084.1	MA0084.1	0.724
MA0087.1	MA0087.1	0.97
MA0088.1	MA0088.1	0.608
MA0090.1	MA0090.1	4.24263e-4
MA0091.1	MA0091.1	0.558
MA0092.1	MA0092.1	0.496
MA0093.1	MA0093.1	0.0811
MA0099.2	MA0099.2	1.45921e-4
MA0100.1	MA0100.1	0.156
MA0101.1	MA0101.1	0.0525
MA0102.2	MA0102.2	0.792
MA0103.1	MA0103.1	0.0097
MA0104.2	MA0104.2	0.565
MA0105.1	MA0105.1	0.00714
MA0106.1	MA0106.1	0.0591
MA0107.1	MA0107.1	0.132
MA0108.2	MA0108.2	0.013
MA0111.1	MA0111.1	0.655
MA0112.2	MA0112.2	0.848
MA0113.1	MA0113.1	0.456
MA0114.1	MA0114.1	0.598
MA0115.1	MA0115.1	0.0213
MA0116.1	MA0116.1	0.278
MA0117.1	MA0117.1	0.0132
MA0119.1	MA0119.1	0.363
MA0122.1	MA0122.1	0.632
MA0124.1	MA0124.1	0.662
MA0125.1	MA0125.1	0.755
MA0131.1	MA0131.1	0.938
MA0135.1	MA0135.1	0.606
MA0136.1	MA0136.1	5.56362e-11
MA0137.2	MA0137.2	0.27
MA0138.2	MA0138.2	0.405
MA0139.1	MA0139.1	0.265
MA0140.1	MA0140.1	4.62858e-7
MA0141.1	MA0141.1	0.722
MA0142.1	MA0142.1	0.779
MA0143.1	MA0143.1	0.282
MA0144.1	MA0144.1	0.756
MA0145.1	MA0145.1	0.968
MA0146.1	MA0146.1	0.541
MA0147.1	MA0147.1	0.969
MA0148.1	MA0148.1	0.0346
MA0149.1	MA0149.1	0.642
MA0150.1	MA0150.1	0.113
MA0152.1	MA0152.1	0.723
MA0153.1	MA0153.1	0.117
MA0154.1	MA0154.1	0.39
MA0155.1	MA0155.1	0.492
MA0156.1	MA0156.1	4.36057e-9
MA0157.1	MA0157.1	0.0357
MA0159.1	MA0159.1	0.0647
MA0160.1	MA0160.1	0.172
MA0162.1	MA0162.1	0.00726
MA0163.1	MA0163.1	0.0513
MA0164.1	MA0164.1	0.115
MA0258.1	MA0258.1	0.841
MA0259.1	MA0259.1	0.979

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11073

Novel motif	Logo	P-value
1	1	0.822
10	10	0.0826
100	100	0.0362
101	101	0.623
102	102	0.813
103	103	0.116
104	104	0.87
105	105	0.317
106	106	0.478
107	107	0.226
108	108	0.203
109	109	0.243
11	11	0.613
110	110	0.495
111	111	0.968
112	112	0.237
113	113	0.167
114	114	0.165
115	115	0.66
116	116	0.262
117	117	0.0296
118	118	0.512
119	119	0.532
12	12	0.765
120	120	0.571
121	121	0.162
122	122	0.379
123	123	0.225
124	124	0.588
125	125	0.614
126	126	0.511
127	127	0.745
128	128	0.362
129	129	0.3
13	13	0.318
130	130	0.358
131	131	0.728
132	132	0.136
133	133	0.26
134	134	0.323
135	135	0.628
136	136	0.0649
137	137	0.0697
138	138	0.643
139	139	0.459
14	14	0.425
140	140	0.631
141	141	0.615
142	142	0.463
143	143	0.105
144	144	0.46
145	145	0.845
146	146	0.47
147	147	0.142
148	148	0.0379
149	149	0.0836
15	15	0.219
150	150	0.459
151	151	0.329
152	152	0.853
153	153	0.328
154	154	0.601
155	155	0.0883
156	156	0.794
157	157	0.99
158	158	0.00329
159	159	0.267
16	16	0.683
160	160	0.0193
161	161	0.586
162	162	0.0205
163	163	0.872
164	164	0.748
165	165	0.967
166	166	0.308
167	167	0.739
168	168	0.874
169	169	0.412
17	17	0.889
18	18	0.988
19	19	0.743
2	2	0.431
20	20	0.466
21	21	0.0432
22	22	0.456
23	23	0.473
24	24	0.0982
25	25	0.11
26	26	0.255
27	27	0.426
28	28	0.119
29	29	0.514
3	3	0.453
30	30	0.232
31	31	0.491
32	32	0.0186
33	33	0.346
34	34	0.325
35	35	0.732
36	36	0.934
37	37	0.146
38	38	0.845
39	39	0.258
4	4	0.847
40	40	0.00268
41	41	0.586
42	42	0.57
43	43	0.465
44	44	0.849
45	45	0.545
46	46	0.853
47	47	0.934
48	48	0.615
49	49	0.58
5	5	0.799
50	50	0.403
51	51	0.9
52	52	0.856
53	53	0.851
54	54	0.649
55	55	0.915
56	56	0.71
57	57	0.419
58	58	0.0813
59	59	0.88
6	6	0.806
60	60	0.733
61	61	0.37
62	62	0.11
63	63	0.0808
64	64	0.479
65	65	0.282
66	66	0.13
67	67	0.804
68	68	0.405
69	69	0.442
7	7	0.514
70	70	0.561
71	71	0.425
72	72	0.187
73	73	0.602
74	74	0.455
75	75	0.0856
76	76	0.724
77	77	0.0487
78	78	0.0363
79	79	0.653
8	8	0.323
80	80	0.465
81	81	0.525
82	82	0.932
83	83	0.367
84	84	0.847
85	85	0.212
86	86	0.224
87	87	0.925
88	88	0.142
89	89	0.373
9	9	0.888
90	90	0.209
91	91	0.508
92	92	0.821
93	93	0.44
94	94	0.536
95	95	0.0626
96	96	0.341
97	97	0.854
98	98	0.131
99	99	0.00333

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11073

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0000262 mast cell- stimulated sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0000151 (secretory cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0002274 (histamine secreting cell)
0000219 (motile cell)
0000163 (endocrine cell)
0000457 (biogenic amine secreting cell)
0000738 (leukocyte)
0000255 (eukaryotic cell)
0000097 (mast cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000260 (mast cell sample)
0000262 (mast cell- stimulated sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)

@@ Line 13: / Line 13: @@
 |def=
 |expression_enrichment_score=chr9:102584159..102584174,+!p2@NR4A3!2.97!1641.06!NR4A3;;chr8:22550982..22550999,-!p1@EGR3!2.93!2275.12!EGR3;;chr2:68592406..68592424,+!p1@PLEK!2.90!796.64!PLEK;;chr2:157189180..157189290,-!p1@NR4A2!2.67!2311.08!NR4A2;;chr13:72441315..72441454,-!p1@DACH1!2.54!670.02!DACH1;;chr10:38299412..38299430,+!p2@ZNF33A!2.51!320.23!ZNF33A;;chr9:102584128..102584144,+!p3@NR4A3!2.45!518.28!NR4A3;;chr10:64576105..64576133,-!p1@EGR2!2.44!548.83!EGR2;;chr9:102584329..102584341,+!p6@NR4A3!2.37!232.04!NR4A3;;chr10:35484053..35484076,+!p1@CREM!2.36!542.91!CREM;;chr9:102584262..102584276,+!p1@NR4A3!2.35!480.35!NR4A3;;chr6:135502501..135502546,+!p1@MYB!2.35!267.52!MYB;;chr19:36389729..36389751,-!p3@NFKBID!2.33!214.31!NFKBID;;chr17:38020557..38020572,-!p4@IKZF3!2.27!183.27!IKZF3;;chr1:158985493..158985535,+!p4@IFI16!2.26!271.46!IFI16;;chr13:41635029..41635044,-!p4@ELF1!2.24!354.72!ELF1;;chr10:35484090..35484104,+!p6@CREM!2.24!172.92!CREM;;chr14:103059455..103059488,+!p5@RCOR1!2.21!161.10!RCOR1;;chr3:71179699..71179744,-!p2@FOXP1!2.15!987.79!FOXP1;;chrX:48644984..48645005,+!p1@GATA1!2.14!135.98!GATA1;;chr7:137620650..137620677,-!p3@CREB3L2!2.11!126.61!CREB3L2;;chr2:145277640..145277771,-!p1@ZEB2!2.10!1578.00!ZEB2;;chr6:135502408..135502459,+!p2@MYB!2.10!145.34!MYB;;chr3:128212033..128212051,-!p1@GATA2!2.10!124.15!GATA2;;chr7:137620684..137620711,-!p4@CREB3L2!2.07!116.76!CREB3L2;;chr6:15246200..15246214,+!p2@JARID2!2.04!289.69!JARID2;;chr4:144435112..144435176,+!p3@SMARCA5!1.99!195.59!SMARCA5;;chr22:29196433..29196445,-!p4@XBP1!1.99!106.42!XBP1;;chr3:69788576..69788648,+!p1@MITF!1.97!461.13!MITF;;chr21:36421535..36421610,-!p2@RUNX1!1.94!295.11!RUNX1;;chr16:69600209..69600234,+!p4@NFAT5!1.93!105.43!NFAT5;;chr4:106068026..106068084,+!p1@TET2!1.91!672.49!TET2;;chr8:22550825..22550844,-!p7@EGR3!1.90!77.84!EGR3;;chr8:80679993..80680011,-!p1@HEY1!1.88!105.92!HEY1;;chr18:77155922..77155939,+!p1@NFATC1!1.87!193.12!NFATC1;;chr9:102584241..102584261,+!p4@NR4A3!1.87!110.85!NR4A3;;chr8:22550530..22550609,-!p2@EGR3!1.84!68.48!EGR3;;chr16:67063211..67063240,+!p2@CBFB!1.81!290.18!CBFB;;chr8:128747846..128747860,+!p15@MYC!1.81!63.06!MYC;;chr9:102584278..102584285,+!p5@NR4A3!1.75!55.67!NR4A3;;chr20:46130846..46130869,+!p5@NCOA3!1.74!58.63!NCOA3;;chr3:5021268..5021282,+!p4@BHLHE40!1.71!99.52!BHLHE40;;chr10:64576035..64576046,-!p2@EGR2!1.71!49.76!EGR2;;chr12:52445218..52445237,+!p1@NR4A1!1.69!570.50!NR4A1;;chr3:141087393..141087426,+!p3@ZBTB38!1.69!184.75!ZBTB38;;chr6:135502472..135502489,+!p3@MYB!1.69!47.79!MYB;;chr14:75988831..75988847,+!p2@BATF!1.68!47.30!BATF;;chr3:141121847..141121868,+!p5@ZBTB38!1.66!67.49!ZBTB38;;chr13:41593425..41593480,-!p1@ELF1!1.65!265.05!ELF1;;chr6:15246261..15246312,+!p1@JARID2!1.63!948.87!JARID2;;chr4:87857474..87857489,+!p7@AFF1!1.63!70.45!AFF1;;chr3:141150883..141150961,+!p6@ZBTB38!1.63!41.88!ZBTB38;;chr3:71179746..71179783,-!p7@FOXP1!1.62!130.06!FOXP1;;chr19:36391434..36391450,-!p1@NFKBID!1.62!78.33!NFKBID;;chr13:41635067..41635100,-!p5@ELF1!1.60!70.94!ELF1;;chr2:61108695..61108753,+!p1@REL!1.59!246.33!REL;;chr7:127032114..127032163,-!p2@ZNF800!1.59!54.69!ZNF800;;chr14:75988771..75988826,+!p1@BATF!1.56!46.80!BATF;;chr3:141151009..141151033,+!p10@ZBTB38!1.56!34.98!ZBTB38;;chr13:72441506..72441562,-!p3@DACH1!1.56!34.98!DACH1;;chr22:29196492..29196503,-!p3@XBP1!1.55!52.71!XBP1;;chr4:87928105..87928126,+!p13@AFF1!1.54!50.25!AFF1;;chr2:157189317..157189325,-!p8@NR4A2!1.54!33.99!NR4A2;;chr2:68592394..68592405,+!p2@PLEK!1.54!33.99!PLEK;;chr17:38020607..38020621,-!p9@IKZF3!1.53!33.01!IKZF3;;chr7:106810484..106810494,+!p4@HBP1!1.53!32.52!HBP1;;chr14:62162258..62162269,+!p2@HIF1A!1.52!296.09!HIF1A;;chr10:35484804..35484902,+!p2@CREM!1.51!116.27!CREM;;chr6:15246217..15246228,+!p3@JARID2!1.50!53.21!JARID2;;chr8:22550645..22550655,-!p12@EGR3!1.50!30.55!EGR3;;chr2:214014959..214015006,-!p4@IKZF2!1.50!30.55!IKZF2;;chr2:61108808..61108821,+!p3@REL!1.49!37.44!REL;;chr5:132299037..132299048,-!p7@AFF4!1.48!48.77!AFF4;;chr9:2015335..2015370,+!p1@SMARCA2!1.47!330.08!SMARCA2;;chr8:60031619..60031676,-!p1@TOX!1.47!60.60!TOX;;chr6:7108179..7108199,+!p4@RREB1!1.47!56.16!RREB1;;chr21:36260463..36260480,-!p9@RUNX1!1.46!36.95!RUNX1;;chr17:38020392..38020477,-!p1@IKZF3!1.45!27.10!IKZF3;;chr7:17338266..17338282,+!p1@AHR!1.44!276.88!AHR;;chr14:62162285..62162296,+!p3@HIF1A!1.42!127.11!HIF1A;;chr4:87928142..87928165,+!p5@AFF1!1.42!84.74!AFF1;;chr19:57901326..57901385,+!p2@ZNF548!1.41!59.12!ZNF548;;chr5:132299008..132299026,-!p5@AFF4!1.41!54.19!AFF4;;chr3:5021113..5021180,+!p1@BHLHE40!1.40!1594.26!BHLHE40;;chr10:38299441..38299450,+!p3@ZNF33A!1.40!24.14!ZNF33A;;chr13:72441074..72441172,-!p2@DACH1!1.40!24.14!DACH1;;chr14:69260437..69260442,-!p10@ZFP36L1!1.39!23.65!ZFP36L1;;chr6:15246741..15246765,+!p9@JARID2!1.39!23.65!JARID2;;chr6:144329384..144329405,-!p1@PLAGL1!1.37!249.29!PLAGL1;;chr2:214015111..214015179,-!p1@IKZF2!1.36!38.43!IKZF2;;chr20:50159198..50159299,-!p1@NFATC2!1.36!31.53!NFATC2;;chr1:158985469..158985489,+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A!0.53!96.56!RARA;;chr9:94186131..94186174,-!p2@NFIL3!0.53!25.13!NFIL3;;chr1:14026671..14026705,+!p2@PRDM2!0.53!18.23!PRDM2;;chrX:129402866..129402880,-!p1@ZNF280C!0.53!17.24!ZNF280C;;chr9:95640300..95640345,-!p1@ZNF484!0.53!16.75!ZNF484;;chr1:154975258..154975330,+!p1@ZBTB7B!0.53!10.84!ZBTB7B;;chr7:137686552..137686564,-!p9@CREB3L2!0.53!3.94!CREB3L2;;chr4:87968291..87968314,+!p14@AFF1!0.53!3.45!AFF1;;chr20:46130727..46130734,+!p4@NCOA3!0.53!3.45!NCOA3;;chr8:81397876..81397898,+!p5@ZBTB10!0.53!2.96!ZBTB10;;chr2:219524193..219524205,-!p3@ZNF142!0.53!2.96!ZNF142;;chr17:30677160..30677200,+!p1@ZNF207!0.52!432.07!ZNF207;;chr5:138629417..138629446,+!p1@MATR3!0.52!278.35!MATR3;;chr1:42800860..42800912,-!p1@FOXJ3!0.52!111.83!FOXJ3;;chr13:20357063..20357105,-!p1@PSPC1!0.52!96.56!PSPC1;;chr6:56954919..56955000,+!p1@ZNF451!0.52!59.61!ZNF451;;chr19:19932513..19932569,-!p1@ZNF506!0.52!56.66!ZNF506;;chr19:53606636..53606692,-!p1@ZNF160!0.52!54.69!ZNF160;;chr2:28616337..28616355,+!p2@FOSL2!0.52!53.21!FOSL2;;chr16:31724552..31724617,+!p1@ZNF720!0.52!41.38!ZNF720;;chr5:142784003..142784065,-!p2@NR3C1!0.52!24.14!NR3C1;;chr19:21264991..21265026,+!p1@ZNF714!0.52!19.21!ZNF714;;chr9:135282195..135282240,-!p1@TTF1!0.52!17.74!TTF1;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.52!13.30!TAL1;;chr9:116638565..116638606,+!p1@ZNF618!0.52!12.32!ZNF618;;chr19:53030906..53030952,+!p1@ZNF808!0.52!10.84!ZNF808;;chrX:134477924..134477988,-!p1@ZNF75D!0.52!10.84!ZNF75D;;chr19:12721616..12721640,-!p2@ZNF490!0.52!9.85!ZNF490;;chr6:157099198..157099221,+!p3@ARID1B!0.52!9.36!ARID1B;;chr14:65569101..65569119,-!p3@MAX!0.52!8.87!MAX;;chr19:37096139..37096170,-!p2@ZNF529!0.52!7.88!ZNF529;;chr21:36259445..36259519,-!p4@RUNX1!0.52!7.88!RUNX1;;chr1:6845582..6845591,+!p2@CAMTA1!0.52!5.42!CAMTA1;;chr13:41635486..41635497,-!p11@ELF1!0.52!3.45!ELF1;;chr6:126112039..126112062,+!p8@NCOA7!0.52!2.96!NCOA7;;chr14:89029366..89029425,+!p1@ZC3H14!0.51!68.48!ZC3H14;;chr19:35225121..35225175,+!p1@ZNF181!0.51!16.26!ZNF181;;chr19:58400372..58400411,-!p1@ZNF814!0.51!14.78!ZNF814;;chr19:19976683..19976709,+!p1@ZNF253!0.51!12.32!ZNF253;;chr17:5095126..5095169,-!p1@ZNF594!0.51!11.82!ZNF594;;chr19:12595586..12595637,-!p2@ZNF709!0.51!11.33!ZNF709;;chr19:37958086..37958150,-!p1@ZNF569!0.51!10.84!ZNF569;;chr6:35310363..35310382,+!p3@PPARD!0.51!10.35!PPARD;;chr4:57775059..57775139,+!p2@REST!0.51!9.85!REST;;chr4:56412978..56413003,-!p1@CLOCK!0.51!6.40!CLOCK;;chr7:102985288..102985310,-!p2@DNAJC2!0.51!6.40!DNAJC2;;chr17:35767301..35767344,+!p2@TADA2A!0.51!6.40!TADA2A;;chr16:31724618..31724630,+!p2@ZNF720!0.51!4.93!ZNF720;;chr1:25256756..25256774,-!p1@RUNX3!0.51!4.93!RUNX3;;chr19:37406934..37406949,-!p1@ZNF829!0.51!4.43!ZNF829;;chr13:27998871..27998884,+!p4@GTF3A!0.51!3.94!GTF3A;;chr1:8483723..8483752,-!p12@RERE!0.51!3.94!RERE;;chr6:28367481..28367506,-!p2@ZSCAN12!0.51!3.94!ZSCAN12;;chr3:141747441..141747452,-!p4@TFDP2!0.51!3.45!TFDP2;;chr3:40547564..40547616,+!p1@ZNF620!0.51!3.45!ZNF620;;chr19:52391220..52391251,-!p2@ZNF577!0.51!3.45!ZNF577;;chr15:37392094..37392116,-!p6@MEIS2!0.51!2.96!MEIS2;;chr19:42759266..42759290,-!p1@ERF!0.50!90.65!ERF;;chr1:67390665..67390698,+!p1@MIER1!0.50!39.41!MIER1;;chr15:41952591..41952672,+!p1@MGA!0.50!37.44!MGA;;chr18:32870260..32870293,+!p1@ZNF271!0.50!36.46!ZNF271;;chr19:32836499..32836551,+!p1@ZNF507!0.50!31.04!ZNF507;;chr9:104161123..104161205,+!p1@ZNF189!0.50!19.71!ZNF189;;chr4:10458982..10459007,-!p2@ZNF518B!0.50!8.87!ZNF518B;;chr4:4291837..4291859,-!p2@LYAR!0.50!8.87!LYAR;;chrX:129402768..129402796,-!p2@ZNF280C!0.50!8.38!ZNF280C;;chr15:60884747..60884774,-!p3@RORA!0.50!6.40!RORA;;chr4:57774018..57774040,+!p3@REST!0.50!5.91!REST;;chr20:49547766..49547785,-!p5@ADNP!0.50!5.42!ADNP;;chr19:12405689..12405707,-!p3@ZNF44!0.50!4.93!ZNF44;;chr12:12764947..12764986,+!p2@CREBL2!0.50!4.93!CREBL2;;chr6:28303901..28303944,-!p2@ZNF323!0.50!3.94!ZNF323;;chr19:37708814..37708838,+!p2@ZNF383!0.50!3.45!ZNF383;;chr6:12012518..12012531,+!p7@HIVEP1!0.50!2.96!HIVEP1;;chr11:65687222..65687240,+!p7@DRAP1!0.50!2.96!DRAP1;;chr13:46626824..46626835,-!p8@ZC3H13!0.50!2.96!ZC3H13;;chr15:37392534..37392562,-!p10@MEIS2!0.50!2.46!MEIS2;;chr16:69419724..69419735,-!p4@TERF2!0.50!2.46!TERF2;;chr10:38383255..38383324,+!p1@ZNF37A!0.49!26.11!ZNF37A;;chr4:47916588..47916607,-!p1@NFXL1!0.49!22.66!NFXL1;;chr10:76586348..76586366,+!p1@KAT6B!0.49!20.69!KAT6B;;chr19:20748574..20748599,-!p1@ZNF737!0.49!16.26!ZNF737;;chr19:53238260..53238312,-!p1@ZNF611!0.49!9.36!ZNF611;;chr3:107241882..107241904,+!p2@BBX!0.49!6.40!BBX;;chr5:139487608..139487663,+!p3@PURA!0.49!5.42!PURA;;chr6:56954830..56954845,+!p3@ZNF451!0.49!5.42!ZNF451;;chr18:3449821..3449860,+!p7@TGIF1!0.49!4.43!TGIF1;;chr19:12512015..12512044,-!p2@ZNF799!0.49!3.45!ZNF799;;chr2:148779187..148779222,+!p5@MBD5!0.49!2.96!MBD5;;chr12:57914286..57914304,-!p1@DDIT3!0.48!100.50!DDIT3;;chr1:59165724..59165751,-!p1@MYSM1!0.48!62.08!MYSM1;;chr14:74353530..74353571,+!p1@ZNF410!0.48!51.24!ZNF410;;chr3:169491171..169491205,+!p1@MYNN!0.48!47.30!MYNN;;chr19:58331088..58331106,+!p1@ZNF587!0.48!37.94!ZNF587;;chr19:37157713..37157760,-!p1@ZNF461!0.48!15.27!ZNF461;;chr3:113415441..113415500,-!p1@KIAA2018!0.48!14.29!KIAA2018;;chr19:44488330..44488379,+!p1@ZNF155!0.48!12.81!ZNF155;;chr19:57922521..57922550,+!p1@ZNF17!0.48!10.35!ZNF17;;chr19:53758058..53758088,-!p2@ZNF677!0.48!8.38!ZNF677;;chr7:99613250..99613264,+!p2@ZKSCAN1!0.48!7.39!ZKSCAN1;;chr15:50647347..50647366,-!p3@GABPB1!0.48!6.40!GABPB1;;chr9:2017383..2017417,+!p5@SMARCA2!0.48!5.42!SMARCA2;;chr9:3526360..3526421,-!p5@RFX3!0.48!4.43!RFX3;;chr11:129872672..129872695,-!p2@PRDM10!0.48!3.45!PRDM10;;chrX:56258811..56258838,+!p2@KLF8!0.48!2.96!KLF8;;chr3:71632811..71632825,-!p19@FOXP1!0.48!2.96!FOXP1;;chr2:178129414..178129517,-!p1@NFE2L2!0.47!107.40!NFE2L2;;chr3:185826855..185826911,-!p1@ETV5!0.47!73.41!ETV5;;chr12:56583243..56583293,-!p1@SMARCC2!0.47!65.03!SMARCC2;;chr19:24216213..24216314,+!p1@ZNF254!0.47!46.31!ZNF254;;chr19:21324829..21324855,+!p1@ZNF431!0.47!42.37!ZNF431;;chr15:77713222..77713271,+!p1@HMG20A!0.47!32.02!HMG20A;;chr19:7069690..7069726,+!p1@ZNF557!0.47!24.63!ZNF557;;chr1:93544821..93544861,+!p1@MTF2!0.47!20.69!MTF2;;chr19:9649268..9649298,-!p1@ZNF426!0.47!17.74!ZNF426;;chr10:38265517..38265591,-!p1@ZNF25!0.47!9.85!ZNF25;;chr19:58071201..58071238,-!p1@ZNF550!0.47!8.87!ZNF550;;chr1:67396044..67396071,+!p3@MIER1!0.47!8.87!MIER1;;chr9:129622904..129622956,+!p1@ZBTB34!0.47!8.87!ZBTB34;;chr19:37709076..37709154,+!p1@ZNF383!0.47!8.38!ZNF383;;chr15:57210961..57211012,+!p3@TCF12!0.47!7.88!TCF12;;chr19:38085633..38085706,-!p1@ZNF571!0.47!6.40!ZNF571;;chr12:133707172..133707202,+!p2@ZNF10!0.47!5.42!ZNF10;;chr7:137564014..137564042,-!p8@CREB3L2!0.47!3.94!CREB3L2;;chr19:50168861..50168873,-!p3@IRF3!0.47!3.94!IRF3;;chr1:235491168..235491187,-!p3@ARID4B!0.47!2.46!ARID4B;;chr19:54041508..54041527,+!p8@ZNF331!0.47!1.97!ZNF331;;chr1:227751287..227751298,+!p2@ZNF678!0.47!1.97!ZNF678;;chr1:47779845..47779848,-!p3@STIL,p8@TAL1!0.47!1.97!TAL1;;chr1:78050720..78050734,-!p9@ZZZ3!0.47!1.97!ZZZ3;;chr21:30672433..30672464,+!p6@BACH1!0.47!1.97!BACH1;;chr21:36421237..36421252,-!p33@RUNX1!0.47!1.97!RUNX1;;chr13:37494391..37494406,-!p5@SMAD9!0.47!1.97!SMAD9;;chr13:45009301..45009320,-!p7@TSC22D1!0.47!1.97!TSC22D1;;chr14:35873069..35873078,-!p13@NFKBIA!0.47!1.97!NFKBIA;;chr14:69261085..69261095,-!p15@ZFP36L1!0.47!1.97!ZFP36L1;;chr16:30406101..30406114,+!p6@ZNF48!0.47!1.97!ZNF48;;chr16:69681215..69681227,+!p17@NFAT5!0.47!1.97!NFAT5;;chr17:45810594..45810608,+!p1@TBX21!0.47!1.97!TBX21;;chr17:46671504..46671541,-!p2@HOXB5!0.47!1.97!HOXB5;;chr17:7382810..7382822,-!p12@ZBTB4!0.47!1.97!ZBTB4;;chr19:24270027..24270034,+!p8@ZNF254!0.47!1.97!ZNF254;;chr19:31840168..31840186,-!p6@TSHZ3!0.47!1.97!TSHZ3;;chr19:31840278..31840300,-!p5@TSHZ3!0.47!1.97!TSHZ3;;chr19:38085739..38085762,+!p3@ZNF540!0.47!1.97!ZNF540;;chr6:126135900..126135924,+!p22@NCOA7!0.47!1.97!NCOA7;;chr6:391743..391759,+!p1@IRF4!0.47!1.97!IRF4;;chr8:60031534..60031553,-!p8@TOX!0.47!1.97!TOX;;chr8:80680061..80680075,-!p4@HEY1!0.47!1.97!HEY1;;chr2:145277620..145277627,-!p19@ZEB2!0.47!1.97!ZEB2;;chr2:73520667..73520683,-!p1@EGR4!0.47!1.97!EGR4;;chr3:128207349..128207386,-!p3@GATA2!0.47!1.97!GATA2;;chr3:141043050..141043063,+!p22@ZBTB38!0.47!1.97!ZBTB38;;chr3:69811858..69811881,+!p5@MITF!0.47!1.97!MITF;;chr3:71630844..71630862,-!p40@FOXP1!0.47!1.97!FOXP1;;chr4:103423079..103423112,+!p4@NFKB1!0.47!1.97!NFKB1;;chr4:106156800..106156812,+!p17@TET2!0.47!1.97!TET2;;chr4:144434712..144434722,+!p9@SMARCA5!0.47!1.97!SMARCA5;;chr4:147560042..147560046,+!p1@POU4F2!0.47!1.97!POU4F2;;chr4:47916504..47916515,-!p6@NFXL1!0.47!1.97!NFXL1;;chr4:83822294..83822306,+!p8@THAP9!0.47!1.97!THAP9;;chr4:83822343..83822355,+!p9@THAP9!0.47!1.97!THAP9;;chr5:135468516..135468621,+!p1@SMAD5!0.46!100.50!SMAD5;;chr10:51565239..51565263,+!p2@NCOA4!0.46!60.60!NCOA4;;chr3:107241792..107241845,+!p1@BBX!0.46!58.63!BBX;;chr19:9251052..9251079,+!p2@ZNF317!0.46!25.62!ZNF317;;chr19:11708259..11708309,+!p1@ZNF627!0.46!25.62!ZNF627;;chr19:20278012..20278034,+!p1@ZNF486!0.46!21.68!ZNF486;;chr19:11959532..11959593,+!p1@ZNF439!0.46!9.36!ZNF439;;chr2:74229812..74229867,+!p1@TET3!0.46!5.91!TET3;;chr19:37407172..37407217,-!p2@ZNF829!0.46!3.94!ZNF829;;chr7:148823485..148823510,+!p4@ZNF398!0.46!3.45!ZNF398;;chr7:104752306..104752335,+!p4@MLL5!0.46!2.96!MLL5;;
+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000097;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000151;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405
 |ffid_belonging_in_development=CL:0000049,CL:0000134
 |fonse_cell_line=

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FF:11487-119E2: Difference between revisions

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Revision as of 15:18, 15 May 2017

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0