FF:10012-101C3: Difference between revisions

Latest revision as of 12:13, 3 June 2020

Name:	brain, adult, pool1
Species:	Human (Homo sapiens)
Library ID:	CNhs10617
Sample type:	tissues
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	brain
dev stage	77,79,81 years old adult
sex	mixed
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	Ambion
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	0910061 -3
catalog number	Cat:AM6000 Lot:0910061 -3
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-ToTALLY-RNA-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005144

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs10617		CAGE		DRX008626		DRR009498

Accession ID Hg19

Library id		BAM		CTSS
CNhs10617		DRZ000923		DRZ002308

Accession ID Hg38

Library id		BAM		CTSS
CNhs10617		DRZ012273		DRZ013658

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

HumanCAGEScan Download raw sequence, BAM & CTSS

Library id		3prime-FASTQ		5prime-FASTQ		BAM		CTSS
NCig10014		download		download		download		download

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0.285
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.171
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.312
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0.0385
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0.161
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0.496
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.137
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0.264
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0.264
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0.0385
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0.165
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.0385
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.00126
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.128
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.336
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.107
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.232
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0.107
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.101
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.649
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0.0385
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.14
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0.47
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.0739
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.0385
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0.107
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0.521
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.0385
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0.395
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0627
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0.456
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.0385
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0.285
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0.137
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.534
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.574
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.901
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.107
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0.107
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.167
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.0385
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0.673
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0.192
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0.137
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0.483
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.0385
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0.165
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0.0385
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10617

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0103
MA0003.1	MA0003.1	0.372
MA0004.1	MA0004.1	0.349
MA0006.1	MA0006.1	0.408
MA0007.1	MA0007.1	0.29
MA0009.1	MA0009.1	0.161
MA0014.1	MA0014.1	0.564
MA0017.1	MA0017.1	0.00398
MA0018.2	MA0018.2	0.177
MA0019.1	MA0019.1	0.566
MA0024.1	MA0024.1	0.914
MA0025.1	MA0025.1	0.352
MA0027.1	MA0027.1	0.642
MA0028.1	MA0028.1	0.0336
MA0029.1	MA0029.1	0.0407
MA0030.1	MA0030.1	0.219
MA0031.1	MA0031.1	0.971
MA0035.2	MA0035.2	0.0293
MA0038.1	MA0038.1	0.119
MA0039.2	MA0039.2	0.11
MA0040.1	MA0040.1	0.504
MA0041.1	MA0041.1	0.23
MA0042.1	MA0042.1	0.668
MA0043.1	MA0043.1	0.894
MA0046.1	MA0046.1	0.0224
MA0047.2	MA0047.2	0.122
MA0048.1	MA0048.1	0.0521
MA0050.1	MA0050.1	0.00425
MA0051.1	MA0051.1	0.129
MA0052.1	MA0052.1	0.352
MA0055.1	MA0055.1	2.00559e-4
MA0057.1	MA0057.1	0.988
MA0058.1	MA0058.1	0.301
MA0059.1	MA0059.1	0.0701
MA0060.1	MA0060.1	0.638
MA0061.1	MA0061.1	0.00591
MA0062.2	MA0062.2	0.00168
MA0065.2	MA0065.2	0.00117
MA0066.1	MA0066.1	0.0336
MA0067.1	MA0067.1	0.798
MA0068.1	MA0068.1	0.28
MA0069.1	MA0069.1	0.543
MA0070.1	MA0070.1	0.186
MA0071.1	MA0071.1	0.0291
MA0072.1	MA0072.1	0.38
MA0073.1	MA0073.1	0.464
MA0074.1	MA0074.1	0.277
MA0076.1	MA0076.1	0.0695
MA0077.1	MA0077.1	0.2
MA0078.1	MA0078.1	0.928
MA0079.2	MA0079.2	0.493
MA0080.2	MA0080.2	7.3334e-8
MA0081.1	MA0081.1	0.0276
MA0083.1	MA0083.1	0.058
MA0084.1	MA0084.1	0.809
MA0087.1	MA0087.1	0.387
MA0088.1	MA0088.1	0.0921
MA0090.1	MA0090.1	0.237
MA0091.1	MA0091.1	0.71
MA0092.1	MA0092.1	0.419
MA0093.1	MA0093.1	0.373
MA0099.2	MA0099.2	7.17376e-14
MA0100.1	MA0100.1	0.529
MA0101.1	MA0101.1	0.00148
MA0102.2	MA0102.2	0.145
MA0103.1	MA0103.1	0.253
MA0104.2	MA0104.2	0.363
MA0105.1	MA0105.1	7.11063e-4
MA0106.1	MA0106.1	0.0255
MA0107.1	MA0107.1	0.00278
MA0108.2	MA0108.2	0.495
MA0111.1	MA0111.1	0.52
MA0112.2	MA0112.2	0.00161
MA0113.1	MA0113.1	0.405
MA0114.1	MA0114.1	0.00357
MA0115.1	MA0115.1	0.587
MA0116.1	MA0116.1	0.00608
MA0117.1	MA0117.1	0.905
MA0119.1	MA0119.1	0.0379
MA0122.1	MA0122.1	0.793
MA0124.1	MA0124.1	0.799
MA0125.1	MA0125.1	0.199
MA0131.1	MA0131.1	0.646
MA0135.1	MA0135.1	0.00628
MA0136.1	MA0136.1	9.43862e-12
MA0137.2	MA0137.2	0.743
MA0138.2	MA0138.2	0.11
MA0139.1	MA0139.1	0.458
MA0140.1	MA0140.1	0.00659
MA0141.1	MA0141.1	0.0197
MA0142.1	MA0142.1	0.893
MA0143.1	MA0143.1	0.41
MA0144.1	MA0144.1	0.553
MA0145.1	MA0145.1	0.278
MA0146.1	MA0146.1	0.00732
MA0147.1	MA0147.1	0.256
MA0148.1	MA0148.1	0.121
MA0149.1	MA0149.1	0.0141
MA0150.1	MA0150.1	5.42885e-4
MA0152.1	MA0152.1	0.865
MA0153.1	MA0153.1	0.175
MA0154.1	MA0154.1	0.0683
MA0155.1	MA0155.1	0.785
MA0156.1	MA0156.1	3.688e-7
MA0157.1	MA0157.1	0.754
MA0159.1	MA0159.1	0.00868
MA0160.1	MA0160.1	0.0362
MA0162.1	MA0162.1	0.142
MA0163.1	MA0163.1	4.56859e-6
MA0164.1	MA0164.1	0.715
MA0258.1	MA0258.1	0.0122
MA0259.1	MA0259.1	0.714

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10617

Novel motif	Logo	P-value
1	1	0.0429
10	10	0.0284
100	100	0.236
101	101	0.806
102	102	0.731
103	103	0.283
104	104	0.139
105	105	0.147
106	106	0.0801
107	107	0.18
108	108	0.903
109	109	0.00779
11	11	0.0135
110	110	0.0327
111	111	0.0633
112	112	0.525
113	113	0.662
114	114	0.123
115	115	0.583
116	116	0.208
117	117	0.00796
118	118	0.0985
119	119	0.126
12	12	0.524
120	120	0.188
121	121	0.445
122	122	0.697
123	123	0.26
124	124	0.0427
125	125	0.277
126	126	0.0393
127	127	0.545
128	128	0.272
129	129	0.524
13	13	4.20359e-4
130	130	0.371
131	131	0.0408
132	132	0.681
133	133	0.00144
134	134	0.386
135	135	0.0754
136	136	0.00548
137	137	0.865
138	138	0.827
139	139	0.12
14	14	0.782
140	140	0.138
141	141	0.377
142	142	0.82
143	143	0.0144
144	144	0.962
145	145	0.0805
146	146	0.55
147	147	0.902
148	148	0.457
149	149	0.471
15	15	0.0581
150	150	0.135
151	151	0.68
152	152	0.135
153	153	0.824
154	154	0.589
155	155	0.448
156	156	0.36
157	157	0.439
158	158	0.924
159	159	0.0935
16	16	0.0858
160	160	0.281
161	161	0.18
162	162	0.773
163	163	0.708
164	164	0.0141
165	165	0.0747
166	166	0.922
167	167	0.415
168	168	0.629
169	169	0.0102
17	17	0.17
18	18	0.282
19	19	0.252
2	2	0.913
20	20	0.0592
21	21	0.0566
22	22	0.277
23	23	0.533
24	24	0.0958
25	25	0.466
26	26	5.73358e-5
27	27	0.885
28	28	0.595
29	29	0.00891
3	3	0.0279
30	30	0.57
31	31	0.988
32	32	0.0589
33	33	0.0632
34	34	0.836
35	35	0.588
36	36	0.118
37	37	0.0349
38	38	0.33
39	39	0.298
4	4	0.794
40	40	0.0403
41	41	0.435
42	42	0.154
43	43	0.118
44	44	0.283
45	45	0.822
46	46	0.061
47	47	0.0673
48	48	0.049
49	49	0.125
5	5	0.563
50	50	0.304
51	51	0.553
52	52	0.746
53	53	0.898
54	54	0.493
55	55	0.444
56	56	0.48
57	57	0.192
58	58	0.304
59	59	0.208
6	6	0.666
60	60	0.0956
61	61	0.0637
62	62	0.203
63	63	0.16
64	64	0.204
65	65	0.326
66	66	0.175
67	67	0.343
68	68	0.237
69	69	0.547
7	7	0.0447
70	70	0.0388
71	71	0.00707
72	72	0.511
73	73	0.0362
74	74	0.762
75	75	0.025
76	76	0.263
77	77	0.262
78	78	0.00168
79	79	0.434
8	8	0.0746
80	80	0.914
81	81	0.67
82	82	0.6
83	83	0.248
84	84	0.505
85	85	0.295
86	86	0.202
87	87	0.00542
88	88	0.828
89	89	0.699
9	9	0.539
90	90	0.0749
91	91	0.558
92	92	0.574
93	93	0.973
94	94	0.0916
95	95	0.0176
96	96	0.938
97	97	0.712
98	98	0.202
99	99	0.918

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10617

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0010012 human brain - adult sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010012 (human brain - adult sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0006238 (future brain)
UBERON:0010316 (germ layer / neural crest)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000033,UBERON:0000061,UBERON:0000073,UBERON:0000153,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000955,UBERON:0001016,UBERON:0001017,UBERON:0001062,UBERON:0002050,UBERON:0002532,UBERON:0004121,UBERON:0005423,UBERON:0005743,UBERON:0007023
+|DRA_sample_Accession=CAGE@SAMD00005144
+|HumanCAGEScanFiles=NCig10014;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/brain%252c%2520adult%252c%2520pool1.NCig10014.10012-101C3.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/brain%252c%2520adult%252c%2520pool1.NCig10014.10012-101C3.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/brain%252c%2520adult%252c%2520pool1.NCig10014.10012-101C3.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/brain%252c%2520adult%252c%2520pool1.NCig10014.10012-101C3.hg19.GCTATA.pairs.bed.gz
+|accession_numbers=CAGE;DRX008626;DRR009498;DRZ000923;DRZ002308;DRZ012273;DRZ013658
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0000479,UBERON:0004121,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0001017,UBERON:0001016
 |ancestors_in_cell_lineage_facet=
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010012
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.77!592.70!TSC22D4;;chr21:34442439..34442455,+!p1@OLIG1!2.36!230.44!OLIG1;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.25!174.96!PEG3;;chr22:38380543..38380569,-!p1@SOX10!2.17!146.94!SOX10;;chr9:77112244..77112262,+!p1@RORB!2.13!147.69!RORB;;chr9:114287433..114287513,+!p1@ZNF483!1.99!241.48!ZNF483;;chr17:53342311..53342400,+!p1@HLF!1.94!97.22!HLF;;chr21:34398234..34398250,+!p1@OLIG2!1.94!86.09!OLIG2;;chr11:61520075..61520136,+!p1@C11orf9!1.93!171.71!C11orf9;;chr10:64134120..64134183,+!p1@ZNF365!1.89!90.73!ZNF365;;chr14:29235961..29236008,+!p1@FOXG1!1.84!67.81!FOXG1;;chr4:57547454..57547469,-!p1@HOPX!1.83!67.07!HOPX;;chr2:145277882..145277967,-!p3@ZEB2!1.79!101.40!ZEB2;;chr5:88178983..88179012,-!p1@MEF2C!1.78!437.40!MEF2C;;chr3:181429704..181429722,+!p1@SOX2!1.78!59.56!SOX2;;chr2:162272785..162272836,+!p1@TBR1!1.77!57.42!TBR1;;chr17:37764128..37764258,-!p1@NEUROD2!1.72!51.86!NEUROD2;;chr4:81118647..81118666,+!p1@PRDM8!1.70!63.82!PRDM8;;chr21:34442540..34442560,+!p2@OLIG1!1.69!47.96!OLIG1;;chr15:80733570..80733659,+!p2@ARNT2!1.68!47.22!ARNT2;;chr12:106976774..106976788,+!p1@RFX4!1.68!46.66!RFX4;;chr12:26277817..26277863,-!p2@BHLHE41!1.66!59.56!BHLHE41;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.66!44.90!SMARCE1;;chr15:80735246..80735321,+!p3@ARNT2!1.62!41.10!ARNT2;;chr2:166326200..166326216,+!p1@CSRNP3!1.60!55.38!CSRNP3;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.59!37.94!POU3F3;;chr8:40755333..40755352,-!p1@ZMAT4!1.59!37.76!ZMAT4;;chr8:53322304..53322340,-!p1@ST18!1.58!37.29!ST18;;chr2:2334997..2335053,-!p1@MYT1L!1.56!35.62!MYT1L;;chr19:13135582..13135600,+!p3@NFIX!1.56!35.07!NFIX;;chr16:1031762..1031781,+!p1@SOX8!1.55!34.32!SOX8;;chr18:53070846..53070902,-!p6@TCF4!1.54!33.67!TCF4;;chr5:88179017..88179046,-!p2@MEF2C!1.53!126.81!MEF2C;;chr19:13135386..13135435,+!p4@NFIX!1.51!31.36!NFIX;;chr2:60781201..60781258,-!p3@BCL11A!1.49!29.87!BCL11A;;chr10:134599649..134599653,-!p1@NKX6-2!1.49!29.87!NKX6-2;;chr3:181429741..181429767,+!p2@SOX2!1.47!28.85!SOX2;;chr19:57352109..57352153,-!p2@ZIM2!1.46!27.92!ZIM2;;chr22:41763452..41763466,+!p2@TEF!1.46!27.55!TEF;;chrX:25034067..25034088,-!p1@ARX!1.44!26.72!ARX;;chr15:80696703..80696754,+!p1@ARNT2!1.43!34.32!ARNT2;;chr14:29236269..29236285,+!p3@FOXG1!1.42!25.51!FOXG1;;chr10:48355030..48355090,+!p1@ZNF488!1.40!31.17!ZNF488;;chr2:95963052..95963106,+!p1@KCNIP3!1.40!24.12!KCNIP3;;chr7:31380292..31380351,-!p1@NEUROD6!1.39!23.47!NEUROD6;;chr12:106976678..106976708,+!p2@RFX4!1.37!22.64!RFX4;;chr10:119302232..119302265,+!p1@EMX2!1.37!22.26!EMX2;;chr1:214161272..214161322,+!p1@PROX1!1.36!30.80!PROX1;;chr11:113930425..113930471,+!p1@ZBTB16!1.33!29.41!ZBTB16;;chrX:85969626..85969664,+!p1@DACH2!1.32!19.95!DACH2;;chr14:29234581..29234601,+!p2@FOXG1!1.32!19.76!FOXG1;;chr1:151032860..151032918,+!p1@MLLT11!1.31!224.13!MLLT11;;chr17:7492684..7492778,-!p2@SOX15!1.31!40.35!SOX15;;chr4:57522166..57522260,-!p2@HOPX!1.30!21.52!HOPX;;chr9:126774018..126774055,+!p1@LHX2!1.30!18.74!LHX2;;chr12:26277956..26277980,-!p1@BHLHE41!1.29!64.84!BHLHE41;;chr11:125034640..125034655,+!p1@PKNOX2!1.28!18.18!PKNOX2;;chr2:162272889..162272915,+!p2@TBR1!1.27!17.72!TBR1;;chr8:53322347..53322378,-!p2@ST18!1.25!16.88!ST18;;chr20:62680984..62680999,-!p1@SOX18!1.23!20.97!SOX18;;chr17:70117153..70117174,+!p1@SOX9!1.20!149.82!SOX9;;chr2:166428839..166428859,+!p2@CSRNP3!1.20!14.75!CSRNP3;;chr3:141105705..141105770,+!p4@ZBTB38!1.19!17.81!ZBTB38;;chr12:54779511..54779577,-!p5@ZNF385A!1.19!14.66!ZNF385A;;chr7:63505799..63505904,+!p1@ZNF727!1.19!14.38!ZNF727;;chr14:33403881..33403924,+!p1@NPAS3!1.18!14.29!NPAS3;;chr11:8102846..8102892,+!p1@TUB!1.17!19.11!TUB;;chr11:47400078..47400106,-!p1@SPI1!1.17!13.82!SPI1;;chr19:46801639..46801699,+!p1@HIF3A!1.17!13.82!HIF3A;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.17!13.73!POU3F3;;chr21:34442584..34442587,+!p3@OLIG1!1.16!13.36!OLIG1;;chrX:118739835..118739862,-!p1@NKRF!1.15!14.56!NKRF;;chrY:21906594..21906622,-!p1@KDM5D!1.15!12.99!KDM5D;;chr9:77112225..77112238,+!p2@RORB!1.14!12.89!RORB;;chr1:151032922..151032951,+!p2@MLLT11!1.13!20.69!MLLT11;;chr14:58798013..58798071,+!p2@ARID4A!1.13!12.34!ARID4A;;chr3:126076242..126076257,-!p1@KLF15!1.12!15.21!KLF15;;chr2:145275982..145276003,-!p7@ZEB2!1.12!12.25!ZEB2;;chr1:2461692..2461710,-!p1@HES5!1.12!12.06!HES5;;chr8:145560371..145560449,-!p1@SCRT1!1.12!12.06!SCRT1;;chr6:19837592..19837621,+!p1@ID4!1.11!73.01!ID4;;chr3:24536253..24536328,-!p1@THRB!1.11!22.64!THRB;;chr12:54785074..54785122,-!p2@ZNF385A!1.11!18.55!ZNF385A;;chr5:92920256..92920282,+!p7@NR2F1!1.11!14.47!NR2F1;;chr1:244214577..244214593,+!p1@ZNF238!1.11!11.78!ZNF238;;chr11:31832658..31832681,-!p1@PAX6!1.10!11.60!PAX6;;chr2:95963120..95963136,+!p2@KCNIP3!1.10!11.50!KCNIP3;;chr19:38085768..38085821,+!p1@ZNF540!1.09!17.16!ZNF540;;chr6:126112039..126112062,+!p8@NCOA7!1.09!13.64!NCOA7;;chr19:38720294..38720348,-!p1@DPF1!1.07!13.36!DPF1;;chr2:145277640..145277771,-!p1@ZEB2!1.06!142.03!ZEB2;;chr10:38265517..38265591,-!p1@ZNF25!1.06!40.63!ZNF25;;chr2:162273241..162273253,+!p4@TBR1!1.06!10.58!TBR1;;chr16:51185172..51185197,-!p1@SALL1!1.06!10.58!SALL1;;chr4:57522598..57522664,-!p3@HOPX!1.06!10.48!HOPX;;chr8:60031682..60031710,-!p2@TOX!1.05!16.88!TOX;;chr13:100634031..100634045,+!p1@ZIC2!1.05!10.30!ZIC2;;chr15:31658288..31658338,+!p4@KLF13!1.05!10.20!KLF13;;chr19:30863271..30863338,+!p1@ZNF536!1.05!10.11!ZNF536;;chr3:141105235..141105307,+!p7@ZBTB38!1.05!10.11!ZBTB38;;chr2:60780607..60780624,-!p2@BCL11A!1.04!30.71!BCL11A;;chr10:64133862..64133884,+!p4@ZNF365!1.04!10.02!ZNF365;;chrX:118739782..118739829,-!p2@NKRF!1.03!9.65!NKRF;;chr13:45010939..45011033,-!p1@TSC22D1!1.02!632.03!TSC22D1;;chr17:38256822..38256851,-!p1@NR1D1!1.02!75.23!NR1D1;;chr11:113930291..113930339,+!p2@ZBTB16!1.02!15.68!ZBTB16;;chr10:31610110..31610159,+!p2@ZEB1!1.02!9.56!ZEB1;;chr8:22550530..22550609,-!p2@EGR3!1.02!9.46!EGR3;;chr12:26277929..26277955,-!p3@BHLHE41!1.01!13.17!BHLHE41;;chr2:192015750..192015793,-!p2@STAT4!1.01!12.52!STAT4;;chr19:7580549..7580596,+!p3@ZNF358!1.01!9.28!ZNF358;;chr19:46800289..46800327,+!p2@HIF3A!1.01!9.18!HIF3A;;chr7:28725740..28725778,+!p1@CREB5!1.00!82.56!CREB5;;chr21:39870339..39870443,-!p1@ERG!1.00!9.09!ERG;;chr6:15401104..15401166,+!p5@JARID2!1.00!8.91!JARID2;;chr2:162272716..162272753,+!p3@TBR1!1.00!8.91!TBR1;;chr17:38219209..38219230,+!p1@THRA!0.99!118.00!THRA;;chr17:17726907..17726958,-!p2@SREBF1!0.98!54.92!SREBF1;;chr17:38256877..38256900,-!p2@NR1D1!0.98!28.11!NR1D1;;chr8:145560111..145560165,-!p2@SCRT1!0.98!8.53!SCRT1;;chr19:58545454..58545498,+!p1@ZSCAN1!0.98!8.53!ZSCAN1;;chr10:64133910..64133925,+!p5@ZNF365!0.98!8.53!ZNF365;;chr19:13135731..13135787,+!p10@NFIX!0.98!8.44!NFIX;;chr3:52001396..52001425,-!p4@PCBP4!0.97!15.03!PCBP4;;chr2:166428861..166428883,+!p3@CSRNP3!0.97!8.35!CSRNP3;;chr4:26344778..26344807,+!p8@RBPJ!0.97!8.35!RBPJ;;chr12:103351444..103351461,+!p1@ASCL1!0.97!8.35!ASCL1;;chr4:26344754..26344772,+!p10@RBPJ!0.97!8.26!RBPJ;;chr20:42544782..42544828,+!p4@TOX2!0.97!8.26!TOX2;;chr6:126112074..126112144,+!p1@NCOA7!0.96!111.69!NCOA7;;chr1:61548069..61548102,+!p3@NFIA!0.96!20.32!NFIA;;chr19:13134772..13134822,+!p2@NFIX!0.96!12.06!NFIX;;chr6:143266185..143266238,-!p2@HIVEP2!0.96!11.50!HIVEP2;;chr2:68592406..68592424,+!p1@PLEK!0.96!8.16!PLEK;;chr12:103352277..103352324,+!p2@ASCL1!0.96!8.07!ASCL1;;chr10:111987079..111987115,+!p3@MXI1!0.95!10.95!MXI1;;chr18:53068911..53068935,-!p4@TCF4!0.95!9.09!TCF4;;chr11:125034605..125034636,+!p2@PKNOX2!0.95!7.89!PKNOX2;;chr1:40105299..40105326,-!p1@HEYL!0.95!7.89!HEYL;;chr17:38219143..38219154,+!p2@THRA!0.94!28.20!THRA;;chr1:8585945..8586056,-!p3@RERE!0.94!26.44!RERE;;chr2:162273254..162273267,+!p6@TBR1!0.94!7.79!TBR1;;chr3:21792682..21792720,-!p1@ZNF385D!0.94!7.79!ZNF385D;;chr2:2330039..2330072,-!p6@MYT1L!0.93!7.61!MYT1L;;chr2:2328725..2328739,-!p5@MYT1L!0.93!7.51!MYT1L;;chr2:42721205..42721307,+!p4@MTA3!0.93!7.51!MTA3;;chr3:147127142..147127168,+!p1@ZIC1!0.93!7.51!ZIC1;;chr18:53070913..53070933,-!p16@TCF4!0.93!7.51!TCF4;;chr11:31832862..31832884,-!p2@PAX6!0.93!7.51!PAX6;;chr12:26277798..26277809,-!p5@BHLHE41!0.93!7.42!BHLHE41;;chr2:180726291..180726311,-!p1@ZNF385B!0.93!7.42!ZNF385B;;chr9:126774058..126774081,+!p3@LHX2!0.93!7.42!LHX2;;chr19:13135566..13135577,+!p9@NFIX!0.93!7.42!NFIX;;chrX:106959661..106959763,-!p4@TSC22D3!0.92!22.45!TSC22D3;;chr1:151032833..151032850,+!p3@MLLT11!0.92!16.88!MLLT11;;chr1:151032782..151032801,+!p4@MLLT11!0.92!15.03!MLLT11;;chr3:126076264..126076305,-!p2@KLF15!0.92!10.30!KLF15;;chr1:151032739..151032748,+!p6@MLLT11!0.92!9.28!MLLT11;;chr11:8102819..8102845,+!p3@TUB!0.92!9.28!TUB;;chr9:126773880..126773895,+!p2@LHX2!0.92!7.33!LHX2;;chr16:51185318..51185348,-!p2@SALL1!0.92!7.33!SALL1;;chr16:85932760..85932775,+!p1@IRF8!0.92!7.33!IRF8;;chr3:24536332..24536358,-!p2@THRB!0.92!7.24!THRB;;chr2:192015701..192015743,-!p1@STAT4!0.91!9.83!STAT4;;chr10:64134045..64134083,+!p3@ZNF365!0.91!7.14!ZNF365;;chr11:113930401..113930422,+!p3@ZBTB16!0.91!7.14!ZBTB16;;chr7:150974206..150974255,-!p1@SMARCD3!0.90!45.27!SMARCD3;;chr3:18466787..18466839,-!p1@SATB1!0.90!32.75!SATB1;;chr1:164528340..164528379,+!p4@PBX1!0.90!17.72!PBX1;;chr18:52989031..52989079,-!p2@TCF4!0.90!17.07!TCF4;;chr2:2328299..2328363,-!p3@MYT1L!0.90!6.96!MYT1L;;chr12:24102576..24102623,-!p2@SOX5!0.90!6.96!SOX5;;chr19:21512202..21512225,-!p1@ZNF708!0.89!36.64!ZNF708;;chr14:21994337..21994442,-!p1@SALL2!0.89!19.48!SALL2;;chr2:178128250..178128293,-!p6@NFE2L2!0.89!17.72!NFE2L2;;chr2:162273196..162273210,+!p5@TBR1!0.89!6.68!TBR1;;chr5:88179230..88179270,-!p4@MEF2C!0.88!13.36!MEF2C;;chr14:33408072..33408114,+!p2@NPAS3!0.88!7.79!NPAS3;;chr5:138609489..138609542,+!p8@MATR3!0.88!6.59!MATR3;;chr19:53636125..53636178,-!p1@ZNF415!0.87!19.20!ZNF415;;chr7:64023410..64023428,-!p2@ZNF680!0.87!10.48!ZNF680;;chr16:79634624..79634642,-!p1@MAF!0.86!26.16!MAF;;chr19:57183114..57183145,-!p1@ZNF835!0.86!7.14!ZNF835;;chr15:80696410..80696477,+!p6@ARNT2!0.86!6.22!ARNT2;;chr22:41777927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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016
+|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0006238,UBERON:0010316
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 43: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/brain%252c%2520adult%252c%2520pool1.CNhs10617.10012-101C3.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/brain%252c%2520adult%252c%2520pool1.CNhs10617.10012-101C3.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/brain%252c%2520adult%252c%2520pool1.CNhs10617.10012-101C3.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/brain%252c%2520adult%252c%2520pool1.CNhs10617.10012-101C3.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/brain%252c%2520adult%252c%2520pool1.CNhs10617.10012-101C3.hg38.nobarcode.ctss.bed.gz
 |id=FF:10012-101C3
-|is_a=EFO:0002091;;FF:0000004;;FF:0000210;;FF:0010012
+|is_a=EFO:0002091;;FF:0010012
+|is_obsolete=
+|library_id=CNhs10617
+|library_id_phase_based=2:CNhs10617
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10012
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10012
 |name=brain, adult, pool1
 |namespace=FANTOM5
@@ Line 42: / Line 62: @@
 |profile_cagescan=NCig10014,,,
 |profile_hcage=CNhs10617,LSID656,release008,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|refex=http://refex.dbcls.jp/genelist.php?lang
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 |rna_box=101
 |rna_catalog_number=Cat:AM6000 Lot:0910061 -3
@@ Line 57: / Line 80: @@
 |rna_weight_ug=10
 |sample_age=
+|sample_category=tissues
 |sample_cell_catalog=NA
 |sample_cell_line=
@@ Line 69: / Line 93: @@
 |sample_ethnicity=C
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.05864812377812e-289!GO:0005737;cytoplasm;8.54777079006291e-162!GO:0044444;cytoplasmic part;2.52944941255435e-107!GO:0043226;organelle;1.29120359901031e-91!GO:0043229;intracellular organelle;4.21163670191857e-91!GO:0043227;membrane-bound organelle;2.13009926266318e-86!GO:0043231;intracellular membrane-bound organelle;3.40262707960153e-86!GO:0005515;protein binding;1.95940625471574e-72!GO:0044422;organelle part;6.41889303833206e-65!GO:0044446;intracellular organelle part;6.74587701909167e-64!GO:0032991;macromolecular complex;1.64142186930361e-63!GO:0016043;cellular component organization and biogenesis;1.18506525083597e-47!GO:0030529;ribonucleoprotein complex;2.46010836224681e-43!GO:0005739;mitochondrion;1.45367107988882e-42!GO:0033036;macromolecule localization;5.39865240938586e-40!GO:0015031;protein transport;1.75920134507325e-39!GO:0003723;RNA binding;3.33346097496622e-39!GO:0031090;organelle membrane;9.36774194282277e-38!GO:0008104;protein localization;6.27020981573927e-37!GO:0045184;establishment of protein localization;5.07132171429744e-36!GO:0043234;protein complex;1.28069136717291e-35!GO:0044429;mitochondrial part;7.8798711802619e-32!GO:0046907;intracellular transport;1.0096274955406e-30!GO:0043233;organelle lumen;2.59975482845209e-29!GO:0031974;membrane-enclosed lumen;2.59975482845209e-29!GO:0051649;establishment of cellular localization;4.08951351873201e-29!GO:0051641;cellular localization;4.30068490034418e-29!GO:0044428;nuclear part;6.57783723762772e-28!GO:0016192;vesicle-mediated transport;1.93132249106508e-27!GO:0031975;envelope;7.22381277983092e-27!GO:0031967;organelle envelope;9.33120823834943e-27!GO:0005829;cytosol;1.87320723756155e-26!GO:0005840;ribosome;2.61680732582484e-25!GO:0019538;protein metabolic process;4.09145189282916e-25!GO:0016071;mRNA metabolic process;9.01085219997292e-24!GO:0044238;primary metabolic process;7.15564989332978e-23!GO:0006886;intracellular protein transport;1.13690978028739e-22!GO:0008380;RNA splicing;3.04511348991571e-22!GO:0044260;cellular macromolecule metabolic process;7.71933567473178e-22!GO:0005740;mitochondrial envelope;8.62592258551866e-22!GO:0006396;RNA processing;1.04258556256258e-21!GO:0006119;oxidative phosphorylation;1.61117759327899e-21!GO:0044237;cellular metabolic process;1.69785688403149e-21!GO:0031966;mitochondrial membrane;2.44711973354196e-21!GO:0044267;cellular protein metabolic process;3.3375110744285e-21!GO:0031982;vesicle;5.17342087741164e-21!GO:0003735;structural constituent of ribosome;7.55830949870165e-21!GO:0006397;mRNA processing;2.40695978926406e-20!GO:0006412;translation;2.77309275065465e-20!GO:0031410;cytoplasmic vesicle;3.47458675930109e-20!GO:0043170;macromolecule metabolic process;3.93865116692189e-20!GO:0031988;membrane-bound vesicle;9.08918070710617e-20!GO:0006996;organelle organization and biogenesis;3.95125395109285e-19!GO:0016023;cytoplasmic membrane-bound vesicle;5.19077505080757e-19!GO:0005794;Golgi apparatus;5.48909091132173e-19!GO:0019866;organelle inner membrane;6.9362195613427e-19!GO:0065003;macromolecular complex assembly;8.56962611015139e-19!GO:0005743;mitochondrial inner membrane;1.90425502472092e-18!GO:0009058;biosynthetic process;1.93198830194373e-17!GO:0033279;ribosomal subunit;2.07297168135666e-17!GO:0005634;nucleus;5.51728672867476e-17!GO:0022607;cellular component assembly;1.37981124359547e-16!GO:0044455;mitochondrial membrane part;5.1844746853698e-16!GO:0031981;nuclear lumen;1.08911167129939e-15!GO:0005746;mitochondrial respiratory chain;1.9427817963277e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.63516231937314e-15!GO:0005681;spliceosome;3.83814402278321e-15!GO:0016462;pyrophosphatase activity;4.71990502828184e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;4.76694605506987e-15!GO:0000166;nucleotide binding;1.08767120935946e-14!GO:0009059;macromolecule biosynthetic process;1.13834805551128e-14!GO:0044249;cellular biosynthetic process;1.36287632059464e-14!GO:0048770;pigment granule;1.85396649262405e-14!GO:0042470;melanosome;1.85396649262405e-14!GO:0012505;endomembrane system;2.18758222635683e-14!GO:0017111;nucleoside-triphosphatase activity;3.63711987252316e-14!GO:0050136;NADH dehydrogenase (quinone) activity;4.85906770791572e-14!GO:0003954;NADH dehydrogenase activity;4.85906770791572e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.85906770791572e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.98233576220366e-14!GO:0006512;ubiquitin cycle;7.80885910793742e-14!GO:0045045;secretory pathway;1.4995224599924e-13!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.45287025011201e-13!GO:0044445;cytosolic part;6.44050207842584e-13!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.08580983265951e-12!GO:0031980;mitochondrial lumen;1.31600204291932e-12!GO:0005759;mitochondrial matrix;1.31600204291932e-12!GO:0006457;protein folding;1.53838400889698e-12!GO:0030964;NADH dehydrogenase complex (quinone);3.60994764253083e-12!GO:0045271;respiratory chain complex I;3.60994764253083e-12!GO:0005747;mitochondrial respiratory chain complex I;3.60994764253083e-12!GO:0042775;organelle ATP synthesis coupled electron transport;5.46482008328721e-12!GO:0042773;ATP synthesis coupled electron transport;5.46482008328721e-12!GO:0022618;protein-RNA complex assembly;6.8112735837135e-12!GO:0006810;transport;8.00887098817837e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;9.32692185618784e-12!GO:0007264;small GTPase mediated signal transduction;1.29882728216458e-11!GO:0048193;Golgi vesicle transport;1.83270902046787e-11!GO:0003924;GTPase activity;1.91626573642382e-11!GO:0043412;biopolymer modification;2.45070363655176e-11!GO:0016874;ligase activity;2.45070363655176e-11!GO:0032553;ribonucleotide binding;3.29118029126141e-11!GO:0032555;purine ribonucleotide binding;3.29118029126141e-11!GO:0030135;coated vesicle;4.0153089403219e-11!GO:0043687;post-translational protein modification;5.39719461782993e-11!GO:0006464;protein modification process;5.89998873677092e-11!GO:0019829;cation-transporting ATPase activity;9.81240379899401e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.14831192351587e-10!GO:0008135;translation factor activity, nucleic acid binding;1.16897603753431e-10!GO:0008092;cytoskeletal protein binding;1.31158094463596e-10!GO:0015935;small ribosomal subunit;1.56223185259588e-10!GO:0017076;purine nucleotide binding;2.33693556077376e-10!GO:0006605;protein targeting;2.85770866012353e-10!GO:0051603;proteolysis involved in cellular protein catabolic process;3.07061716899614e-10!GO:0006511;ubiquitin-dependent protein catabolic process;3.87508254525346e-10!GO:0000502;proteasome complex (sensu Eukaryota);4.17923089981073e-10!GO:0043228;non-membrane-bound organelle;4.77266875292454e-10!GO:0043232;intracellular non-membrane-bound organelle;4.77266875292454e-10!GO:0019941;modification-dependent protein catabolic process;5.17349490824475e-10!GO:0043632;modification-dependent macromolecule catabolic process;5.17349490824475e-10!GO:0043283;biopolymer metabolic process;5.63509126346364e-10!GO:0005783;endoplasmic reticulum;5.69144274842671e-10!GO:0051179;localization;6.29299030100062e-10!GO:0005768;endosome;6.34991366562258e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.42964105414261e-10!GO:0005525;GTP binding;6.62160477049105e-10!GO:0051082;unfolded protein binding;6.65909261431587e-10!GO:0044257;cellular protein catabolic process;7.00754937307654e-10!GO:0005654;nucleoplasm;1.01700255637353e-09!GO:0044265;cellular macromolecule catabolic process;1.59417961691877e-09!GO:0051234;establishment of localization;1.81611927073248e-09!GO:0032940;secretion by cell;3.35591786252866e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.35591786252866e-09!GO:0016044;membrane organization and biogenesis;3.45270217152175e-09!GO:0008134;transcription factor binding;3.63106759260877e-09!GO:0007399;nervous system development;4.60445406136241e-09!GO:0008565;protein transporter activity;5.75920034416069e-09!GO:0044431;Golgi apparatus part;5.91612206021096e-09!GO:0015986;ATP synthesis coupled proton transport;1.07314358070394e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.07314358070394e-08!GO:0043005;neuron projection;1.1106866658034e-08!GO:0006793;phosphorus metabolic process;1.16831171363702e-08!GO:0006796;phosphate metabolic process;1.16831171363702e-08!GO:0044451;nucleoplasm part;1.20448857634251e-08!GO:0051186;cofactor metabolic process;1.49766315437446e-08!GO:0007010;cytoskeleton organization and biogenesis;2.30210485716241e-08!GO:0030695;GTPase regulator activity;2.58085842631557e-08!GO:0043285;biopolymer catabolic process;2.59004588336996e-08!GO:0032561;guanyl ribonucleotide binding;2.75934276141822e-08!GO:0019001;guanyl nucleotide binding;2.75934276141822e-08!GO:0044248;cellular catabolic process;2.96257586886607e-08!GO:0030163;protein catabolic process;3.17532244800722e-08!GO:0003743;translation initiation factor activity;5.17349010460528e-08!GO:0006461;protein complex assembly;5.27843126386729e-08!GO:0005083;small GTPase regulator activity;5.32862474610883e-08!GO:0030136;clathrin-coated vesicle;7.25530271454747e-08!GO:0015934;large ribosomal subunit;7.81653449719442e-08!GO:0006413;translational initiation;8.83682520606322e-08!GO:0005761;mitochondrial ribosome;9.82893071786074e-08!GO:0000313;organellar ribosome;9.82893071786074e-08!GO:0010467;gene expression;1.01004024677705e-07!GO:0008639;small protein conjugating enzyme activity;1.20951120619561e-07!GO:0006446;regulation of translational initiation;1.38249973318572e-07!GO:0030036;actin cytoskeleton organization and biogenesis;1.49196777887582e-07!GO:0009057;macromolecule catabolic process;1.95291827847944e-07!GO:0046034;ATP metabolic process;1.97318143657955e-07!GO:0019717;synaptosome;2.07535749661256e-07!GO:0004842;ubiquitin-protein ligase activity;2.52927371029577e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;2.63964781305217e-07!GO:0000375;RNA splicing, via transesterification reactions;2.63964781305217e-07!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.63964781305217e-07!GO:0019787;small conjugating protein ligase activity;2.71485907356178e-07!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.04354789182157e-07!GO:0015631;tubulin binding;3.73341813818756e-07!GO:0009060;aerobic respiration;4.25653284803675e-07!GO:0006754;ATP biosynthetic process;4.57104253788392e-07!GO:0006753;nucleoside phosphate metabolic process;4.57104253788392e-07!GO:0045333;cellular respiration;4.84333732196669e-07!GO:0016469;proton-transporting two-sector ATPase complex;6.182384255717e-07!GO:0009141;nucleoside triphosphate metabolic process;7.89741239803221e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.16410605103571e-07!GO:0009144;purine nucleoside triphosphate metabolic process;8.16410605103571e-07!GO:0016604;nuclear body;8.18336303887863e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;8.38762942277565e-07!GO:0006163;purine nucleotide metabolic process;8.38762942277565e-07!GO:0048471;perinuclear region of cytoplasm;8.97444734619579e-07!GO:0000139;Golgi membrane;9.97055225305426e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.12846765692903e-06!GO:0030029;actin filament-based process;1.21808007716643e-06!GO:0009150;purine ribonucleotide metabolic process;1.25691172689495e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.29464516254468e-06!GO:0016607;nuclear speck;1.35377057245948e-06!GO:0006913;nucleocytoplasmic transport;1.4407958910923e-06!GO:0006164;purine nucleotide biosynthetic process;1.44926739000541e-06!GO:0044440;endosomal part;1.79124284774954e-06!GO:0010008;endosome membrane;1.79124284774954e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.97971097273987e-06!GO:0009152;purine ribonucleotide biosynthetic process;2.07626012349517e-06!GO:0016310;phosphorylation;2.12655306697207e-06!GO:0005905;coated pit;2.14622585948663e-06!GO:0009055;electron carrier activity;2.2013801067071e-06!GO:0051169;nuclear transport;2.21619488119052e-06!GO:0048475;coated membrane;2.36510066842376e-06!GO:0030117;membrane coat;2.36510066842376e-06!GO:0007242;intracellular signaling cascade;2.5906220996301e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.72495528409682e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.72495528409682e-06!GO:0006732;coenzyme metabolic process;2.72495528409682e-06!GO:0009259;ribonucleotide metabolic process;2.75549077570406e-06!GO:0008287;protein serine/threonine phosphatase complex;2.88081674351967e-06!GO:0031252;leading edge;2.90078754347769e-06!GO:0005730;nucleolus;3.72463786392841e-06!GO:0016881;acid-amino acid ligase activity;3.78181494306121e-06!GO:0009142;nucleoside triphosphate biosynthetic process;3.82520191914238e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.82520191914238e-06!GO:0005635;nuclear envelope;3.93670602705265e-06!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.93670602705265e-06!GO:0019899;enzyme binding;4.24288468181973e-06!GO:0031965;nuclear membrane;4.35925820466318e-06!GO:0003779;actin binding;5.51713643055155e-06!GO:0006897;endocytosis;7.22761009823731e-06!GO:0010324;membrane invagination;7.22761009823731e-06!GO:0048523;negative regulation of cellular process;7.72935377910669e-06!GO:0044432;endoplasmic reticulum part;8.13151478203866e-06!GO:0009260;ribonucleotide biosynthetic process;8.17142680680166e-06!GO:0032559;adenyl ribonucleotide binding;9.37333566774045e-06!GO:0006099;tricarboxylic acid cycle;9.37333566774045e-06!GO:0046356;acetyl-CoA catabolic process;9.37333566774045e-06!GO:0005770;late endosome;9.41506197660465e-06!GO:0045259;proton-transporting ATP synthase complex;9.46280035719172e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.02790825288564e-05!GO:0015630;microtubule cytoskeleton;1.11154064530711e-05!GO:0022890;inorganic cation transmembrane transporter activity;1.50472252704953e-05!GO:0005769;early endosome;1.95283278309697e-05!GO:0009109;coenzyme catabolic process;2.34669182267933e-05!GO:0005524;ATP binding;2.34669182267933e-05!GO:0030425;dendrite;2.39750617371007e-05!GO:0042623;ATPase activity, coupled;2.66653185789431e-05!GO:0005798;Golgi-associated vesicle;2.8075488555511e-05!GO:0017038;protein import;2.88063371884919e-05!GO:0007265;Ras protein signal transduction;2.91417008456194e-05!GO:0051246;regulation of protein metabolic process;3.40431650751341e-05!GO:0006084;acetyl-CoA metabolic process;3.66270938797127e-05!GO:0003712;transcription cofactor activity;3.88411307140245e-05!GO:0016887;ATPase activity;4.02921966100688e-05!GO:0030554;adenyl nucleotide binding;4.42344912845076e-05!GO:0051128;regulation of cellular component organization and biogenesis;4.50057997297099e-05!GO:0051187;cofactor catabolic process;4.58905364319098e-05!GO:0030120;vesicle coat;4.94574555187056e-05!GO:0030662;coated vesicle membrane;4.94574555187056e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.03928851920152e-05!GO:0008654;phospholipid biosynthetic process;6.02531217656571e-05!GO:0005789;endoplasmic reticulum membrane;6.02531217656571e-05!GO:0032446;protein modification by small protein conjugation;6.3465092265685e-05!GO:0005874;microtubule;7.34941526990223e-05!GO:0009056;catabolic process;7.39729470499371e-05!GO:0005773;vacuole;7.62966345330798e-05!GO:0008021;synaptic vesicle;7.94049323427794e-05!GO:0000902;cell morphogenesis;8.25579656828835e-05!GO:0032989;cellular structure morphogenesis;8.25579656828835e-05!GO:0006613;cotranslational protein targeting to membrane;9.5535948852582e-05!GO:0048519;negative regulation of biological process;9.76044075383853e-05!GO:0016567;protein ubiquitination;0.000101127522575191!GO:0008017;microtubule binding;0.00010569099601304!GO:0030133;transport vesicle;0.000110141017639769!GO:0008047;enzyme activator activity;0.000112388454457446!GO:0048489;synaptic vesicle transport;0.000120459408056747!GO:0006325;establishment and/or maintenance of chromatin architecture;0.000136250585402991!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000145358817446372!GO:0000245;spliceosome assembly;0.000147675261837626!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000152466258293026!GO:0015399;primary active transmembrane transporter activity;0.000152466258293026!GO:0046467;membrane lipid biosynthetic process;0.000165678648547717!GO:0005793;ER-Golgi intermediate compartment;0.000187829563241608!GO:0006650;glycerophospholipid metabolic process;0.000250472127947813!GO:0005741;mitochondrial outer membrane;0.000256512141754642!GO:0019226;transmission of nerve impulse;0.000271204190069543!GO:0030027;lamellipodium;0.000277814197003103!GO:0006888;ER to Golgi vesicle-mediated transport;0.000300891186610525!GO:0045055;regulated secretory pathway;0.000325217815090106!GO:0044453;nuclear membrane part;0.000332677334107455!GO:0043566;structure-specific DNA binding;0.000346913633915923!GO:0003729;mRNA binding;0.000350901677109858!GO:0016564;transcription repressor activity;0.000363019397949246!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000397076499129777!GO:0043492;ATPase activity, coupled to movement of substances;0.000405058883199535!GO:0005096;GTPase activator activity;0.000406573706736825!GO:0031968;organelle outer membrane;0.000421189213361553!GO:0019867;outer membrane;0.000448683717664292!GO:0006752;group transfer coenzyme metabolic process;0.000449825315028305!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000458106945604698!GO:0005643;nuclear pore;0.000491206381490032!GO:0051188;cofactor biosynthetic process;0.000498490872178621!GO:0006323;DNA packaging;0.000498490872178621!GO:0006403;RNA localization;0.000501423986013486!GO:0051056;regulation of small GTPase mediated signal transduction;0.000520115254473208!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000536710789631271!GO:0050657;nucleic acid transport;0.000583979956308621!GO:0051236;establishment of RNA localization;0.000583979956308621!GO:0050658;RNA transport;0.000583979956308621!GO:0007269;neurotransmitter secretion;0.000588932983897366!GO:0000159;protein phosphatase type 2A complex;0.000628624579068567!GO:0000323;lytic vacuole;0.000646339871573431!GO:0005764;lysosome;0.000646339871573431!GO:0003697;single-stranded DNA binding;0.000657851773870066!GO:0000151;ubiquitin ligase complex;0.000726606122903417!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000737936733713709!GO:0008219;cell death;0.000745548970179415!GO:0016265;death;0.000745548970179415!GO:0030118;clathrin coat;0.000749009492315031!GO:0008601;protein phosphatase type 2A regulator activity;0.00077401273805697!GO:0015980;energy derivation by oxidation of organic compounds;0.000813144713804504!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000823265308220127!GO:0019208;phosphatase regulator activity;0.000865752642609628!GO:0007019;microtubule depolymerization;0.000879287963477346!GO:0016197;endosome transport;0.000921371014716761!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00107408773345663!GO:0005839;proteasome core complex (sensu Eukaryota);0.00117361632043602!GO:0003714;transcription corepressor activity;0.00125724722479521!GO:0006643;membrane lipid metabolic process;0.00128618325110355!GO:0006606;protein import into nucleus;0.00129765587264253!GO:0051170;nuclear import;0.00134269395510617!GO:0045786;negative regulation of progression through cell cycle;0.00143221283771575!GO:0030384;phosphoinositide metabolic process;0.00143404971258278!GO:0031072;heat shock protein binding;0.00147485983389992!GO:0012501;programmed cell death;0.00151389718654061!GO:0008154;actin polymerization and/or depolymerization;0.00152594464459225!GO:0019902;phosphatase binding;0.00152594464459225!GO:0006915;apoptosis;0.00159303921894721!GO:0030427;site of polarized growth;0.00159303921894721!GO:0009966;regulation of signal transduction;0.00165310717274608!GO:0030532;small nuclear ribonucleoprotein complex;0.00167919312502457!GO:0005516;calmodulin binding;0.00171381394004799!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0017455008582248!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00177876297121181!GO:0051087;chaperone binding;0.00178658333653207!GO:0030426;growth cone;0.00179201636420606!GO:0043623;cellular protein complex assembly;0.00184335196559375!GO:0016568;chromatin modification;0.00184697161951076!GO:0003724;RNA helicase activity;0.00185895556823321!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.0019249908095265!GO:0016311;dephosphorylation;0.00195240948407204!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00216375975415674!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00216375975415674!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00216375975415674!GO:0050767;regulation of neurogenesis;0.00216999397892246!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00218522531654266!GO:0022406;membrane docking;0.00221529895050524!GO:0048278;vesicle docking;0.00221529895050524!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00224762592453401!GO:0004667;prostaglandin-D synthase activity;0.00224762592453401!GO:0050802;circadian sleep/wake cycle, sleep;0.00224762592453401!GO:0022410;circadian sleep/wake cycle process;0.00224762592453401!GO:0042749;regulation of circadian sleep/wake cycle;0.00224762592453401!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00224762592453401!GO:0004721;phosphoprotein phosphatase activity;0.00232447088048186!GO:0008026;ATP-dependent helicase activity;0.00237726640323383!GO:0048487;beta-tubulin binding;0.00240540333702462!GO:0043069;negative regulation of programmed cell death;0.00241833705323694!GO:0001505;regulation of neurotransmitter levels;0.00244281169477963!GO:0016050;vesicle organization and biogenesis;0.00245988737640599!GO:0019888;protein phosphatase regulator activity;0.00249674632344917!GO:0006612;protein targeting to membrane;0.00251624288845431!GO:0006904;vesicle docking during exocytosis;0.00251624288845431!GO:0005869;dynactin complex;0.00253698236187708!GO:0006916;anti-apoptosis;0.00254101833525321!GO:0031902;late endosome membrane;0.00273498814247534!GO:0043066;negative regulation of apoptosis;0.00273498814247534!GO:0005938;cell cortex;0.00276794349574218!GO:0006259;DNA metabolic process;0.00284282754054008!GO:0031114;regulation of microtubule depolymerization;0.00292996300061372!GO:0007026;negative regulation of microtubule depolymerization;0.00292996300061372!GO:0006892;post-Golgi vesicle-mediated transport;0.0030015747932663!GO:0016791;phosphoric monoester hydrolase activity;0.00321344555997847!GO:0007266;Rho protein signal transduction;0.00324382212353917!GO:0048468;cell development;0.00327434919094033!GO:0043021;ribonucleoprotein binding;0.00328271160418336!GO:0006607;NLS-bearing substrate import into nucleus;0.00328405646595282!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00328405646595282!GO:0009108;coenzyme biosynthetic process;0.00330535246785938!GO:0012506;vesicle membrane;0.00355940600196441!GO:0042254;ribosome biogenesis and assembly;0.00355940600196441!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00356371366081991!GO:0048167;regulation of synaptic plasticity;0.00356371366081991!GO:0006333;chromatin assembly or disassembly;0.00361186307021401!GO:0031901;early endosome membrane;0.00364342330098171!GO:0005048;signal sequence binding;0.00368871900776977!GO:0005085;guanyl-nucleotide exchange factor activity;0.00372510027784114!GO:0016126;sterol biosynthetic process;0.00378699880980912!GO:0008361;regulation of cell size;0.00380359181413105!GO:0006470;protein amino acid dephosphorylation;0.00391173753483244!GO:0043209;myelin sheath;0.00401613667098423!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00403711831574626!GO:0004812;aminoacyl-tRNA ligase activity;0.00403711831574626!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00403711831574626!GO:0000314;organellar small ribosomal subunit;0.0040976976027817!GO:0005763;mitochondrial small ribosomal subunit;0.0040976976027817!GO:0005875;microtubule associated complex;0.00420609781789604!GO:0009117;nucleotide metabolic process;0.00428487236963425!GO:0046488;phosphatidylinositol metabolic process;0.00430762241392678!GO:0004722;protein serine/threonine phosphatase activity;0.00430762241392678!GO:0046578;regulation of Ras protein signal transduction;0.00431656487029971!GO:0046474;glycerophospholipid biosynthetic process;0.00459074383365959!GO:0030867;rough endoplasmic reticulum membrane;0.00470087054029777!GO:0004298;threonine endopeptidase activity;0.00485253479268974!GO:0005774;vacuolar membrane;0.00511347384990967!GO:0016301;kinase activity;0.00519030936381997!GO:0004386;helicase activity;0.00533002691102651!GO:0005791;rough endoplasmic reticulum;0.00541661540204127!GO:0006891;intra-Golgi vesicle-mediated transport;0.00581474094757291!GO:0048500;signal recognition particle;0.00628608392726377!GO:0007268;synaptic transmission;0.00628608392726377!GO:0043038;amino acid activation;0.00628608392726377!GO:0006418;tRNA aminoacylation for protein translation;0.00628608392726377!GO:0043039;tRNA aminoacylation;0.00628608392726377!GO:0050803;regulation of synapse structure and activity;0.006303829796057!GO:0051028;mRNA transport;0.00639722971945753!GO:0019887;protein kinase regulator activity;0.00647798911530871!GO:0006414;translational elongation;0.00649001599437728!GO:0008610;lipid biosynthetic process;0.0065264508148569!GO:0016049;cell growth;0.00669804082343151!GO:0065002;intracellular protein transport across a membrane;0.0067284468556633!GO:0051261;protein depolymerization;0.00673858283384908!GO:0030041;actin filament polymerization;0.00683361470248941!GO:0001726;ruffle;0.00696882790601007!GO:0007272;ensheathment of neurons;0.00702092889286283!GO:0008366;axon ensheathment;0.00702092889286283!GO:0050839;cell adhesion molecule binding;0.00731532288679477!GO:0051427;hormone receptor binding;0.00739369503814937!GO:0051920;peroxiredoxin activity;0.00755400567939876!GO:0009892;negative regulation of metabolic process;0.00760887087593195!GO:0030865;cortical cytoskeleton organization and biogenesis;0.00760887087593195!GO:0030424;axon;0.00778444906095623!GO:0006366;transcription from RNA polymerase II promoter;0.00799155012212541!GO:0050811;GABA receptor binding;0.00816918113237636!GO:0044433;cytoplasmic vesicle part;0.00850591553724261!GO:0030320;cellular monovalent inorganic anion homeostasis;0.00882508418335873!GO:0055083;monovalent inorganic anion homeostasis;0.00882508418335873!GO:0055064;chloride ion homeostasis;0.00882508418335873!GO:0030644;cellular chloride ion homeostasis;0.00882508418335873!GO:0044448;cell cortex part;0.00890468686950079!GO:0003713;transcription coactivator activity;0.00898255246077855!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00907747422211759!GO:0008180;signalosome;0.00935634283646583!GO:0006644;phospholipid metabolic process;0.00942933903702733!GO:0030660;Golgi-associated vesicle membrane;0.0101894002017416!GO:0019903;protein phosphatase binding;0.0104083318389642!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0105292693398963!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0105292693398963!GO:0003746;translation elongation factor activity;0.0108324513580319!GO:0048699;generation of neurons;0.0110043888858355!GO:0008139;nuclear localization sequence binding;0.0111251155593068!GO:0019904;protein domain specific binding;0.0114061418181694!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0114061418181694!GO:0033673;negative regulation of kinase activity;0.0114148676608435!GO:0006469;negative regulation of protein kinase activity;0.0114148676608435!GO:0005092;GDP-dissociation inhibitor activity;0.0117714708375877!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0118629577251284!GO:0035035;histone acetyltransferase binding;0.0119419075053589!GO:0022008;neurogenesis;0.0119728945239161!GO:0008186;RNA-dependent ATPase activity;0.0120760150609643!GO:0006887;exocytosis;0.0122899474838798!GO:0035257;nuclear hormone receptor binding;0.012426242449304!GO:0007017;microtubule-based process;0.0124982115973587!GO:0005765;lysosomal membrane;0.0129145177987753!GO:0051168;nuclear export;0.0129145177987753!GO:0001508;regulation of action potential;0.012977732897947!GO:0030742;GTP-dependent protein binding;0.0131802961884777!GO:0004674;protein serine/threonine kinase activity;0.0136214979711826!GO:0032011;ARF protein signal transduction;0.0137377299038288!GO:0032012;regulation of ARF protein signal transduction;0.0137377299038288!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0137377299038288!GO:0045047;protein targeting to ER;0.0137377299038288!GO:0008286;insulin receptor signaling pathway;0.0140075739701167!GO:0030658;transport vesicle membrane;0.0148598720404165!GO:0006402;mRNA catabolic process;0.0148946788214107!GO:0008250;oligosaccharyl transferase complex;0.0151628850427079!GO:0006665;sphingolipid metabolic process;0.0153129519888811!GO:0043681;protein import into mitochondrion;0.0157689820388493!GO:0030137;COPI-coated vesicle;0.0158191889287099!GO:0005885;Arp2/3 protein complex;0.0162190417724296!GO:0006695;cholesterol biosynthetic process;0.0163706343829436!GO:0001578;microtubule bundle formation;0.0163706343829436!GO:0030132;clathrin coat of coated pit;0.0163706343829436!GO:0046930;pore complex;0.0170465306758505!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0171608855311868!GO:0005762;mitochondrial large ribosomal subunit;0.0176912583948342!GO:0000315;organellar large ribosomal subunit;0.0176912583948342!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0177776242410229!GO:0044437;vacuolar part;0.017809591185714!GO:0030258;lipid modification;0.0179526972616277!GO:0001558;regulation of cell growth;0.0180808128322561!GO:0019207;kinase regulator activity;0.0183060762719853!GO:0051540;metal cluster binding;0.018530272269983!GO:0051536;iron-sulfur cluster binding;0.018530272269983!GO:0007243;protein kinase cascade;0.0189210162896817!GO:0046489;phosphoinositide biosynthetic process;0.0194784286804014!GO:0009165;nucleotide biosynthetic process;0.019608372965688!GO:0015629;actin cytoskeleton;0.0197817767936848!GO:0051348;negative regulation of transferase activity;0.0198818309967639!GO:0008312;7S RNA binding;0.0200831212870984!GO:0031109;microtubule polymerization or depolymerization;0.0201373487233598!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0201928306580529!GO:0030054;cell junction;0.020202166172231!GO:0051276;chromosome organization and biogenesis;0.020642174462953!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.020642174462953!GO:0045296;cadherin binding;0.0210783764119826!GO:0031124;mRNA 3'-end processing;0.0213109762148045!GO:0030182;neuron differentiation;0.0215108443574706!GO:0006818;hydrogen transport;0.0217142682122674!GO:0030659;cytoplasmic vesicle membrane;0.0223848326409547!GO:0000062;acyl-CoA binding;0.0229215051964272!GO:0006661;phosphatidylinositol biosynthetic process;0.0235380472986667!GO:0016740;transferase activity;0.0238107856084448!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0238898479970597!GO:0005001;transmembrane receptor protein tyrosine phosphatase activity;0.024074872679219!GO:0019198;transmembrane receptor protein phosphatase activity;0.024074872679219!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0247291695041035!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0252002647238784!GO:0005868;cytoplasmic dynein complex;0.0255903756556696!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.027046517828518!GO:0031371;ubiquitin conjugating enzyme complex;0.0273848158329082!GO:0004004;ATP-dependent RNA helicase activity;0.0275302983162518!GO:0006672;ceramide metabolic process;0.0281486777879101!GO:0006376;mRNA splice site selection;0.028311669670658!GO:0000389;nuclear mRNA 3'-splice site recognition;0.028311669670658!GO:0030125;clathrin vesicle coat;0.0287973156909749!GO:0030665;clathrin coated vesicle membrane;0.0287973156909749!GO:0015992;proton transport;0.0289055051603775!GO:0005099;Ras GTPase activator activity;0.0295146614635265!GO:0016579;protein deubiquitination;0.0297124304999173!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0297312537584484!GO:0003690;double-stranded DNA binding;0.0308581806638261!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.030921019859811!GO:0033043;regulation of organelle organization and biogenesis;0.030921019859811!GO:0007005;mitochondrion organization and biogenesis;0.0314518694177254!GO:0016859;cis-trans isomerase activity;0.0315144128499406!GO:0005813;centrosome;0.0316715622571521!GO:0019894;kinesin binding;0.0318810768793224!GO:0007034;vacuolar transport;0.032044456877575!GO:0008088;axon cargo transport;0.0320717797740522!GO:0019911;structural constituent of myelin sheath;0.032440619982333!GO:0042802;identical protein binding;0.0329148067483708!GO:0005100;Rho GTPase activator activity;0.0342745062901768!GO:0043087;regulation of GTPase activity;0.0342973144540274!GO:0001666;response to hypoxia;0.0344785277454328!GO:0043488;regulation of mRNA stability;0.0350517467045668!GO:0043487;regulation of RNA stability;0.0350517467045668!GO:0004576;oligosaccharyl transferase activity;0.0354784036540819!GO:0005086;ARF guanyl-nucleotide exchange factor activity;0.0354784036540819!GO:0006364;rRNA processing;0.035830593327825!GO:0050789;regulation of biological process;0.0362418848143721!GO:0030030;cell projection organization and biogenesis;0.0365331360777854!GO:0048858;cell projection morphogenesis;0.0365331360777854!GO:0032990;cell part morphogenesis;0.0365331360777854!GO:0016481;negative regulation of transcription;0.0365741934708378!GO:0031324;negative regulation of cellular metabolic process;0.0368713860239196!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0371314702232069!GO:0046519;sphingoid metabolic process;0.0371314702232069!GO:0042578;phosphoric ester hydrolase activity;0.0378112198076321!GO:0030880;RNA polymerase complex;0.0384458763697594!GO:0019843;rRNA binding;0.0387311444996128!GO:0016363;nuclear matrix;0.0392930544208439!GO:0051252;regulation of RNA metabolic process;0.0396718701863709!GO:0051287;NAD binding;0.0401160947560366!GO:0007050;cell cycle arrest;0.0406216918716458!GO:0004683;calmodulin-dependent protein kinase activity;0.0410577671747478!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0410577671747478!GO:0015002;heme-copper terminal oxidase activity;0.0410577671747478!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0410577671747478!GO:0004129;cytochrome-c oxidase activity;0.0410577671747478!GO:0043086;negative regulation of catalytic activity;0.0416002981386547!GO:0000059;protein import into nucleus, docking;0.041833998615806!GO:0003725;double-stranded RNA binding;0.0418627230684281!GO:0003711;transcription elongation regulator activity;0.0426868776304389!GO:0051789;response to protein stimulus;0.0429661817075705!GO:0006986;response to unfolded protein;0.0429661817075705!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0438882446900111!GO:0042552;myelination;0.0440225901260975!GO:0006611;protein export from nucleus;0.0440846990097103!GO:0000209;protein polyubiquitination;0.0451862975543123!GO:0035258;steroid hormone receptor binding;0.0453674012670152!GO:0042026;protein refolding;0.0460436981377993!GO:0042995;cell projection;0.0460436981377993!GO:0016584;nucleosome positioning;0.0460436981377993!GO:0051726;regulation of cell cycle;0.0463207380942027!GO:0065009;regulation of a molecular function;0.0463969622981698!GO:0030663;COPI coated vesicle membrane;0.0471404930242925!GO:0030126;COPI vesicle coat;0.0471404930242925!GO:0007006;mitochondrial membrane organization and biogenesis;0.0471404930242925!GO:0019783;small conjugating protein-specific protease activity;0.0472181929385643!GO:0030911;TPR domain binding;0.0476656845685801!GO:0008022;protein C-terminus binding;0.0483530296811338!GO:0016072;rRNA metabolic process;0.0494315517184378!GO:0006378;mRNA polyadenylation;0.0494518725361352!GO:0004860;protein kinase inhibitor activity;0.0495289923844438
 |sample_id=10012
 |sample_note=
@@ Line 76: / Line 101: @@
 |sample_tissue=brain
 |top_motifs=REST:4.00392141867;NHLH1,2:3.95683627154;MYFfamily:3.82661671215;ZBTB6:3.47605095004;EGR1..3:3.24464451216;ZFP161:3.19104573424;MTE{core}:3.15335538435;MTF1:3.10417464621;PRRX1,2:3.05421372278;SOX5:3.02441606329;AHR_ARNT_ARNT2:2.98717274392;MED-1{core}:2.94215710474;PAX5:2.91403965885;ATF2:2.87387844209;FOXM1:2.86001905783;CUX2:2.82138457679;GTF2I:2.74800107464;HOXA9_MEIS1:2.70777734688;PAX6:2.66751675057;NKX3-2:2.66428500828;RREB1:2.66177858971;TFAP2B:2.64577350262;SOX2:2.62915978013;NFIX:2.58737745245;PRDM1:2.5547762487;RFX1:2.54544671392;HIC1:2.50045508956;MZF1:2.43508292521;DBP:2.39380293016;OCT4_SOX2{dimer}:2.37467816753;SMAD1..7,9:2.23748355146;MAFB:2.22267186511;PATZ1:2.21768817832;RFX2..5_RFXANK_RFXAP:2.16593907968;SOX{8,9,10}:2.14696612518;JUN:2.12399869755;MAZ:2.11562586773;GATA4:2.11334137302;KLF4:2.091464024;POU5F1:2.06705030131;SOX17:2.04704070061;LMO2:2.03826251136;ARID5B:1.91970427688;EBF1:1.89269513247;GFI1B:1.87121109402;HBP1_HMGB_SSRP1_UBTF:1.85613599229;BREu{core}:1.78971516324;XBP1:1.76262450522;FOXQ1:1.69121066317;TFDP1:1.69079792543;GCM1,2:1.66750135046;POU6F1:1.63300795526;ZNF423:1.60435679984;TGIF1:1.58091769395;CDC5L:1.56979117874;EP300:1.56738083503;ESRRA:1.5509928175;RBPJ:1.37681835282;NRF1:1.36454433408;LEF1_TCF7_TCF7L1,2:1.32696062195;NKX2-3_NKX2-5:1.30678228403;HOX{A4,D4}:1.26176472627;FOX{F1,F2,J1}:1.25729238265;FOXP3:1.21536121253;NFIL3:1.16789720827;POU3F1..4:1.1482447968;T:1.08499986787;GTF2A1,2:1.04690138114;HMGA1,2:1.04508301755;MYOD1:1.03173596465;NANOG:0.98221659772;ZNF384:0.980598565336;STAT1,3:0.954378926914;ZNF238:0.946022334586;CRX:0.928657435639;RORA:0.863502597801;AR:0.851218253105;SPZ1:0.842898435769;HAND1,2:0.828537803525;SP1:0.828060423963;SREBF1,2:0.805555756236;ZEB1:0.799903287086;ZIC1..3:0.797585411995;TFAP2{A,C}:0.78273720096;FOXD3:0.772034382914;NKX6-1,2:0.755727092173;BPTF:0.734603835679;YY1:0.698307496319;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.68200314601;MYBL2:0.667170331882;IKZF2:0.66561908564;TLX1..3_NFIC{dimer}:0.645376576579;HMX1:0.616873038274;MEF2{A,B,C,D}:0.608085296525;TLX2:0.59819234902;GZF1:0.596289102607;ZNF143:0.578668837377;NR3C1:0.562006080724;ONECUT1,2:0.516187688967;TBX4,5:0.511021587046;STAT2,4,6:0.475641302522;TEF:0.468335855432;UFEwm:0.451994432396;FOX{D1,D2}:0.444944123428;FOXL1:0.41713751873;GFI1:0.388175797535;CREB1:0.337307612856;ADNP_IRX_SIX_ZHX:0.32533727748;ATF4:0.315352396936;bHLH_family:0.296781813763;PAX4:0.231193549416;IKZF1:0.230455429543;PAX1,9:0.228957277693;PBX1:0.18551043156;NFE2L1:0.140024910098;ALX1:0.126973747371;NANOG{mouse}:0.11515638811;IRF7:0.103692876174;XCPE1{core}:0.0999307093813;ATF5_CREB3:0.0896131878642;FOXN1:0.0676795618661;TFAP4:0.065897459847;HOX{A6,A7,B6,B7}:0.0522136441464;NFE2L2:-0.016260817694;NR1H4:-0.0462701739943;PAX2:-0.0657095561818;ZNF148:-0.06803335277;FOX{I1,J2}:-0.0821133793887;NFY{A,B,C}:-0.0915162228568;PDX1:-0.0950743779937;SNAI1..3:-0.0996608396817;NFATC1..3:-0.172372169082;VSX1,2:-0.174306318706;FOXP1:-0.192250284195;NR5A1,2:-0.224374060842;IRF1,2:-0.238323367691;FOXO1,3,4:-0.309527155323;ESR1:-0.316848371501;DMAP1_NCOR{1,2}_SMARC:-0.373492690869;FOXA2:-0.385744123452;HSF1,2:-0.388879617001;SPI1:-0.39336946299;LHX3,4:-0.401833576899;TFCP2:-0.402581403837;NFE2:-0.403811068505;NKX2-2,8:-0.412014129511;CEBPA,B_DDIT3:-0.441032868989;ATF6:-0.558684742989;SPIB:-0.627764888895;ETS1,2:-0.685165550041;PAX3,7:-0.719186677792;GATA6:-0.731371239131;HNF1A:-0.732203880232;TOPORS:-0.746439269954;TAL1_TCF{3,4,12}:-0.763812197577;TBP:-0.770270069061;TP53:-0.770350750705;POU1F1:-0.777425705525;FOSL2:-0.806499079609;HNF4A_NR2F1,2:-0.828453791748;RXR{A,B,G}:-0.890259120154;PAX8:-0.899739312895;BACH2:-0.930607713076;RUNX1..3:-0.946964625239;FOS_FOS{B,L1}_JUN{B,D}:-1.00887828207;GLI1..3:-1.01395059182;EVI1:-1.04654552829;TEAD1:-1.05647049849;ALX4:-1.07090508143;E2F1..5:-1.15108443157;ZBTB16:-1.18938980068;NFKB1_REL_RELA:-1.19032506545;NKX3-1:-1.20047918226;SRF:-1.28117795882;CDX1,2,4:-1.28224875445;POU2F1..3:-1.2882434316;HLF:-1.29532150501;HIF1A:-1.32278376032;MYB:-1.36781835619;RXRA_VDR{dimer}:-1.38282951087;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.40340395981;ELK1,4_GABP{A,B1}:-1.40364703634;NR6A1:-1.52911217582;STAT5{A,B}:-1.53487219856;NKX2-1,4:-1.53623903372;ELF1,2,4:-1.58497440119;PPARG:-1.65161613442;HES1:-1.67703586126;EN1,2:-1.72388557049;PITX1..3:-1.94841013439;AIRE:-2.01257721933;HOX{A5,B5}:-2.79274975738
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10012-101C3;search_select_hide=table117:FF:10012-101C3
 }}

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FF:10012-101C3: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 12:13, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0