FF:10049-101G4: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023 | |DRA_sample_Accession=CAGE@SAMD00004858 | ||
|accession_numbers=CAGE;DRX008698;DRR009570;DRZ000995;DRZ002380;DRZ012345;DRZ013730 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0001264,UBERON:0002100,UBERON:0000479,UBERON:0000466,UBERON:0002075,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002323,UBERON:0005177,UBERON:0000464,UBERON:0004458,UBERON:0000949 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010049 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr20:43935474..43935490,+!p1@RBPJL!2.81!647.09!RBPJL;;chr7:97840743..97840786,+!p1@BHLHA15!2.65!447.03!BHLHA15;;chr10:23481233..23481249,+!p1@PTF1A!2.49!308.70!PTF1A;;chr22:29196433..29196445,-!p4@XBP1!2.37!255.56!XBP1;;chr1:40105299..40105326,-!p1@HEYL!2.19!153.96!HEYL;;chr1:199996733..199996781,+!p1@NR5A2!2.01!100.82!NR5A2;;chr8:11561684..11561751,+!p1@GATA4!1.95!87.53!GATA4;;chr1:27240455..27240474,-!p1@NR0B2!1.94!85.97!NR0B2;;chr15:53082521..53082549,-!p1@ONECUT1!1.92!82.06!ONECUT1;;chr1:201979743..201979762,+!p1@ELF3!1.89!76.59!ELF3;;chr19:46367576..46367592,+!p1@FOXA3!1.88!74.24!FOXA3;;chr22:29196492..29196503,-!p3@XBP1!1.86!108.63!XBP1;;chr1:151804244..151804310,-!p1@RORC!1.76!57.05!RORC;;chr1:200011711..200011752,+!p3@NR5A2!1.61!39.86!NR5A2;;chr3:126076242..126076257,-!p1@KLF15!1.60!48.45!KLF15;;chr20:22564895..22564910,-!p1@FOXA2!1.60!39.08!FOXA2;;chr20:42984330..42984364,+!p2@HNF4A!1.60!39.08!HNF4A;;chr1:214161272..214161322,+!p1@PROX1!1.59!52.36!PROX1;;chr11:34642612..34642646,+!p1@EHF!1.59!38.29!EHF;;chr7:156803329..156803362,-!p1@MNX1!1.56!35.17!MNX1;;chr1:40367668..40367684,-!p2@MYCL1!1.55!34.39!MYCL1;;chr18:19749541..19749557,+!p1@GATA6!1.54!101.60!GATA6;;chr22:29196547..29196563,-!p2@XBP1!1.51!1104.28!XBP1;;chr22:41763452..41763466,+!p2@TEF!1.49!29.70!TEF;;chr8:76319876..76319926,+!p1@HNF4G!1.48!28.92!HNF4G;;chr1:201979703..201979721,+!p2@ELF3!1.45!27.35!ELF3;;chr11:46299199..46299233,+!p1@CREB3L1!1.44!133.64!CREB3L1;;chr8:102504651..102504683,+!p1@GRHL2!1.44!26.57!GRHL2;;chr15:90611445..90611453,+!p27@ZNF710!1.43!25.79!ZNF710;;chr3:169381420..169381535,-!p1@MECOM!1.42!29.70!MECOM;;chr17:36105042..36105060,-!p1@HNF1B!1.42!25.01!HNF1B;;chr11:113930425..113930471,+!p1@ZBTB16!1.34!29.70!ZBTB16;;chr3:126076264..126076305,-!p2@KLF15!1.30!26.57!KLF15;;chr1:209979467..209979494,-!p1@IRF6!1.28!20.32!IRF6;;chr15:90611465..90611474,+!p29@ZNF710!1.26!17.19!ZNF710;;chrY:21906594..21906622,-!p1@KDM5D!1.26!17.19!KDM5D;;chr13:28494130..28494168,+!p1@PDX1!1.22!15.63!PDX1;;chr6:1312325..1312340,+!p1@FOXQ1!1.17!22.66!FOXQ1;;chr18:19749517..19749531,+!p3@GATA6!1.15!23.45!GATA6;;chr1:2985760..2985774,+!p1@PRDM16!1.15!13.29!PRDM16;;chr7:73038839..73038862,-!p1@MLXIPL!1.13!12.50!MLXIPL;;chr3:128212033..128212051,-!p1@GATA2!1.13!12.50!GATA2;;chr11:61520075..61520136,+!p1@C11orf9!1.12!25.79!C11orf9;;chr11:113930291..113930339,+!p2@ZBTB16!1.11!19.54!ZBTB16;;chr18:6414884..6414942,-!p1@L3MBTL4!1.11!14.85!L3MBTL4;;chr1:199996702..199996732,+!p5@NR5A2!1.10!11.72!NR5A2;;chr2:66662249..66662267,+!p2@MEIS1!1.09!43.76!MEIS1;;chr3:168864315..168864339,-!p2@MECOM!1.09!18.76!MECOM;;chr20:50159198..50159299,-!p1@NFATC2!1.09!16.41!NFATC2;;chr2:66662396..66662407,+!p4@MEIS1!1.08!10.94!MEIS1;;chr11:129245526..129245553,+!p1@BARX2!1.08!10.94!BARX2;;chr11:16419037..16419064,-!p3@SOX6!1.08!10.94!SOX6;;chr7:113726357..113726443,+!p1@FOXP2!1.07!18.76!FOXP2;;chr22:29196030..29196075,-!p5@XBP1!1.05!13.29!XBP1;;chr1:164528410..164528428,+!p1@PBX1!1.02!71.90!PBX1;;chr20:62680984..62680999,-!p1@SOX18!1.02!12.50!SOX18;;chr4:174451370..174451387,-!p1@HAND2!1.02!9.38!HAND2;;chr18:19749504..19749515,+!p5@GATA6!1.02!9.38!GATA6;;chr22:29196511..29196541,-!p1@XBP1!0.99!1009.72!XBP1;;chr1:199996831..199996843,+!p4@NR5A2!0.98!8.60!NR5A2;;chr16:85932760..85932775,+!p1@IRF8!0.98!8.60!IRF8;;chr11:113930401..113930422,+!p3@ZBTB16!0.98!8.60!ZBTB16;;chr17:70117153..70117174,+!p1@SOX9!0.96!86.75!SOX9;;chr2:60780753..60780800,-!p1@BCL11A!0.96!41.42!BCL11A;;chr19:33793430..33793447,-!p1@CEBPA!0.96!35.17!CEBPA;;chrX:25034067..25034088,-!p1@ARX!0.95!7.82!ARX;;chr1:200008734..200008765,+!p2@NR5A2!0.95!7.82!NR5A2;;chr19:46271505..46271575,-!p2@SIX5!0.94!20.32!SIX5;;chr17:53342311..53342400,+!p1@HLF!0.93!8.60!HLF;;chr1:164528340..164528379,+!p4@PBX1!0.92!18.76!PBX1;;chr11:64764435..64764449,-!p1@BATF2!0.92!10.16!BATF2;;chr11:47400078..47400106,-!p1@SPI1!0.90!7.03!SPI1;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.90!7.03!SEBOX;;chr2:68592406..68592424,+!p1@PLEK!0.90!7.03!PLEK;;chr19:46801639..46801699,+!p1@HIF3A!0.90!7.03!HIF3A;;chr20:18038521..18038571,-!p1@OVOL2!0.90!7.03!OVOL2;;chr1:40367530..40367597,-!p1@MYCL1!0.89!12.50!MYCL1;;chr1:164528687..164528711,+!p6@PBX1!0.88!7.82!PBX1;;chr1:8763296..8763339,-!p9@RERE!0.87!16.41!RERE;;chr10:43134001..43134026,-!p1@ZNF33B!0.86!29.70!ZNF33B;;chr2:66662895..66662907,+!p3@MEIS1!0.86!7.82!MEIS1;;chr20:22565370..22565388,-!p2@FOXA2!0.86!6.25!FOXA2;;chr5:50679228..50679288,+!p1@ISL1!0.86!6.25!ISL1;;chr7:63505799..63505904,+!p1@ZNF727!0.86!6.25!ZNF727;;chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!0.86!6.25!SEBOX;;chrY:2803415..2803468,+!p1@ZFY!0.86!6.25!ZFY;;chr1:61548225..61548299,+!p1@NFIA!0.85!85.19!NFIA;;chr10:94449703..94449718,+!p1@HHEX!0.85!25.01!HHEX;;chr3:71632864..71632885,-!p4@FOXP1!0.84!21.10!FOXP1;;chr6:19837592..19837621,+!p1@ID4!0.83!37.51!ID4;;chr2:46524897..46524911,+!p2@EPAS1!0.83!17.19!EPAS1;;chr8:28347737..28347785,-!p1@FBXO16,p2@ZNF395!0.82!12.50!ZNF395;;chr12:3068501..30685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1!0.25!0.78!LYL1;;chr19:22398550..22398579,-!p@chr19:22398550..22398579,-!0.25!0.78!ZNF676;;chr19:22605097..22605121,-!p2@ZNF98!0.25!0.78!ZNF98;;chr19:22605136..22605154,-!p1@ZNF98!0.25!0.78!ZNF98;;chr19:31840278..31840300,-!p5@TSHZ3!0.25!0.78!TSHZ3;;chr19:3359158..3359209,+!p5@NFIC!0.25!0.78!NFIC;;chr19:3366429..3366439,+!p16@NFIC!0.25!0.78!NFIC;;chr19:35417924..35417935,+!p5@ZNF30!0.25!0.78!ZNF30;;chr19:37464453..37464515,+!p4@ZNF568!0.25!0.78!ZNF568;;chr10:101292731..101292741,+!p2@NKX2-3!0.25!0.78!NKX2-3;;chr10:111985777..111985788,+!p4@MXI1!0.25!0.78!MXI1;;chr10:114710430..114710470,+!p30@TCF7L2!0.25!0.78!TCF7L2;;chr10:114886551..114886601,+!p11@TCF7L2!0.25!0.78!TCF7L2;;chr10:124768217..124768228,-!p2@IKZF5!0.25!0.78!IKZF5;;chr10:131635619..131635623,-!p6@EBF3!0.25!0.78!EBF3;;chr10:131762504..131762555,-!p1@EBF3!0.25!0.78!EBF3;;chr10:135122906..135122921,+!p4@ZNF511!0.25!0.78!ZNF511;;chr11:113930477..113930488,+!p4@ZBTB16!0.25!0.78!ZBTB16;;chr11:113930955..113930969,+!p8@ZBTB16!0.25!0.78!ZBTB16;;chr11:15989432..15989436,-!p17@SOX6!0.25!0.78!SOX6;;chr11:16133391..16133439,-!p6@SOX6!0.25!0.78!SOX6;;chr11:2292226..2292270,-!p1@ASCL2!0.25!0.78!ASCL2;;chr11:31832658..31832681,-!p1@PAX6!0.25!0.78!PAX6;;chr11:34645791..34645836,+!p3@EHF!0.25!0.78!EHF;;chr11:34663913..34663945,+!p6@EHF!0.25!0.78!EHF;;chr11:34664014..34664045,+!p4@EHF!0.25!0.78!EHF;;chr11:47279167..47279178,+!p10@NR1H3!0.25!0.78!NR1H3;;chr11:47399920..47399931,-!p7@SPI1!0.25!0.78!SPI1;;chr11:47399947..47399961,-!p3@SPI1!0.25!0.78!SPI1;;chr12:104531768..104531782,-!p7@NFYB!0.25!0.78!NFYB;;chr12:106976678..106976708,+!p2@RFX4!0.25!0.78!RFX4;;chr12:108154762..108154776,-!p4@PRDM4!0.25!0.78!PRDM4;;chr12:10856713..10856723,-!p23@CSDA!0.25!0.78!CSDA;;chr12:10865908..10865915,-!p37@CSDA!0.25!0.78!CSDA;;chr12:121416455..121416479,+!p2@HNF1A!0.25!0.78!HNF1A;;chr12:124496534..124496544,+!p6@ZNF664!0.25!0.78!ZNF664;;chr12:124915257..124915277,-!p23@NCOR2!0.25!0.78!NCOR2;;chr12:125003168..125003180,-!p15@NCOR2!0.25!0.78!NCOR2;;chr12:12794994..12795024,+!p5@CREBL2!0.25!0.78!CREBL2;;chr12:26277994..26278001,-!p6@BHLHE41!0.25!0.78!BHLHE41;;chr12:54394059..54394088,+!p3@HOXC9!0.25!0.78!HOXC9;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.25!0.78!HOXC5;;chr12:54447637..54447659,+!p4@HOXC4!0.25!0.78!HOXC4;;chr12:54778471..54778528,-!p1@ZNF385A!0.25!0.78!ZNF385A;;chr12:56415287..56415300,+!p5@IKZF4!0.25!0.78!IKZF4;;chr13:28494375..28494416,+!p4@PDX1!0.25!0.78!PDX1;;chr13:28541455..28541475,-!p7@CDX2!0.25!0.78!CDX2;;chr13:28541477..28541493,-!p6@CDX2!0.25!0.78!CDX2;;chr13:28543316..28543329,-!p4@CDX2!0.25!0.78!CDX2;;chr13:28543388..28543406,-!p3@CDX2!0.25!0.78!CDX2;;chr13:37494391..37494406,-!p5@SMAD9!0.25!0.78!SMAD9;;chr13:41556678..41556692,-!p15@ELF1!0.25!0.78!ELF1;;chr13:45010776..45010795,-!p13@TSC22D1!0.25!0.78!TSC22D1;;chr13:45150455..45150472,-!p8@TSC22D1!0.25!0.78!TSC22D1;;chr13:72440434..72440479,-!p6@DACH1!0.25!0.78!DACH1;;chr13:72440693..72440706,-!p15@DACH1!0.25!0.78!DACH1;;chr13:72440726..72440736,-!p19@DACH1!0.25!0.78!DACH1;;chr13:72440772..72440847,-!p5@DACH1!0.25!0.78!DACH1;;chr13:73636440..73636451,+!p9@KLF5!0.25!0.78!KLF5;;chr14:35872542..35872553,-!p10@NFKBIA!0.25!0.78!NFKBIA;;chr14:35874077..35874091,-!p8@NFKBIA!0.25!0.78!NFKBIA;;chr14:61190359..61190385,-!p4@SIX4!0.25!0.78!SIX4;;chr21:40181520..40181558,+!p11@ETS2!0.25!0.78!ETS2;;chr21:47063590..47063597,+!p2@PCBP3!0.25!0.78!PCBP3;;chr22:31739411..31739446,-!p5@PATZ1!0.25!0.78!PATZ1;;chr22:42739533..42739586,-!p2@ENST00000515426!0.25!0.78!TCF20;;chr22:46546390..46546401,+!p3@PPARA!0.25!0.78!PPARA;;chr2:100721281..100721307,-!p5@AFF3!0.25!0.78!AFF3;; | |expression_enrichment_score=chr20:43935474..43935490,+!p1@RBPJL!2.81!647.09!RBPJL;;chr7:97840743..97840786,+!p1@BHLHA15!2.65!447.03!BHLHA15;;chr10:23481233..23481249,+!p1@PTF1A!2.49!308.70!PTF1A;;chr22:29196433..29196445,-!p4@XBP1!2.37!255.56!XBP1;;chr1:40105299..40105326,-!p1@HEYL!2.19!153.96!HEYL;;chr1:199996733..199996781,+!p1@NR5A2!2.01!100.82!NR5A2;;chr8:11561684..11561751,+!p1@GATA4!1.95!87.53!GATA4;;chr1:27240455..27240474,-!p1@NR0B2!1.94!85.97!NR0B2;;chr15:53082521..53082549,-!p1@ONECUT1!1.92!82.06!ONECUT1;;chr1:201979743..201979762,+!p1@ELF3!1.89!76.59!ELF3;;chr19:46367576..46367592,+!p1@FOXA3!1.88!74.24!FOXA3;;chr22:29196492..29196503,-!p3@XBP1!1.86!108.63!XBP1;;chr1:151804244..151804310,-!p1@RORC!1.76!57.05!RORC;;chr1:200011711..200011752,+!p3@NR5A2!1.61!39.86!NR5A2;;chr3:126076242..126076257,-!p1@KLF15!1.60!48.45!KLF15;;chr20:22564895..22564910,-!p1@FOXA2!1.60!39.08!FOXA2;;chr20:42984330..42984364,+!p2@HNF4A!1.60!39.08!HNF4A;;chr1:214161272..214161322,+!p1@PROX1!1.59!52.36!PROX1;;chr11:34642612..34642646,+!p1@EHF!1.59!38.29!EHF;;chr7:156803329..156803362,-!p1@MNX1!1.56!35.17!MNX1;;chr1:40367668..40367684,-!p2@MYCL1!1.55!34.39!MYCL1;;chr18:19749541..19749557,+!p1@GATA6!1.54!101.60!GATA6;;chr22:29196547..29196563,-!p2@XBP1!1.51!1104.28!XBP1;;chr22:41763452..41763466,+!p2@TEF!1.49!29.70!TEF;;chr8:76319876..76319926,+!p1@HNF4G!1.48!28.92!HNF4G;;chr1:201979703..201979721,+!p2@ELF3!1.45!27.35!ELF3;;chr11:46299199..46299233,+!p1@CREB3L1!1.44!133.64!CREB3L1;;chr8:102504651..102504683,+!p1@GRHL2!1.44!26.57!GRHL2;;chr15:90611445..90611453,+!p27@ZNF710!1.43!25.79!ZNF710;;chr3:169381420..169381535,-!p1@MECOM!1.42!29.70!MECOM;;chr17:36105042..36105060,-!p1@HNF1B!1.42!25.01!HNF1B;;chr11:113930425..113930471,+!p1@ZBTB16!1.34!29.70!ZBTB16;;chr3:126076264..126076305,-!p2@KLF15!1.30!26.57!KLF15;;chr1:209979467..209979494,-!p1@IRF6!1.28!20.32!IRF6;;chr15:90611465..90611474,+!p29@ZNF710!1.26!17.19!ZNF710;;chrY:21906594..21906622,-!p1@KDM5D!1.26!17.19!KDM5D;;chr13:28494130..28494168,+!p1@PDX1!1.22!15.63!PDX1;;chr6:1312325..1312340,+!p1@FOXQ1!1.17!22.66!FOXQ1;;chr18:19749517..19749531,+!p3@GATA6!1.15!23.45!GATA6;;chr1:2985760..2985774,+!p1@PRDM16!1.15!13.29!PRDM16;;chr7:73038839..73038862,-!p1@MLXIPL!1.13!12.50!MLXIPL;;chr3:128212033..128212051,-!p1@GATA2!1.13!12.50!GATA2;;chr11:61520075..61520136,+!p1@C11orf9!1.12!25.79!C11orf9;;chr11:113930291..113930339,+!p2@ZBTB16!1.11!19.54!ZBTB16;;chr18:6414884..6414942,-!p1@L3MBTL4!1.11!14.85!L3MBTL4;;chr1:199996702..199996732,+!p5@NR5A2!1.10!11.72!NR5A2;;chr2:66662249..66662267,+!p2@MEIS1!1.09!43.76!MEIS1;;chr3:168864315..168864339,-!p2@MECOM!1.09!18.76!MECOM;;chr20:50159198..50159299,-!p1@NFATC2!1.09!16.41!NFATC2;;chr2:66662396..66662407,+!p4@MEIS1!1.08!10.94!MEIS1;;chr11:129245526..129245553,+!p1@BARX2!1.08!10.94!BARX2;;chr11:16419037..16419064,-!p3@SOX6!1.08!10.94!SOX6;;chr7:113726357..113726443,+!p1@FOXP2!1.07!18.76!FOXP2;;chr22:29196030..29196075,-!p5@XBP1!1.05!13.29!XBP1;;chr1:164528410..164528428,+!p1@PBX1!1.02!71.90!PBX1;;chr20:62680984..62680999,-!p1@SOX18!1.02!12.50!SOX18;;chr4:174451370..174451387,-!p1@HAND2!1.02!9.38!HAND2;;chr18:19749504..19749515,+!p5@GATA6!1.02!9.38!GATA6;;chr22:29196511..29196541,-!p1@XBP1!0.99!1009.72!XBP1;;chr1:199996831..199996843,+!p4@NR5A2!0.98!8.60!NR5A2;;chr16:85932760..85932775,+!p1@IRF8!0.98!8.60!IRF8;;chr11:113930401..113930422,+!p3@ZBTB16!0.98!8.60!ZBTB16;;chr17:70117153..70117174,+!p1@SOX9!0.96!86.75!SOX9;;chr2:60780753..60780800,-!p1@BCL11A!0.96!41.42!BCL11A;;chr19:33793430..33793447,-!p1@CEBPA!0.96!35.17!CEBPA;;chrX:25034067..25034088,-!p1@ARX!0.95!7.82!ARX;;chr1:200008734..200008765,+!p2@NR5A2!0.95!7.82!NR5A2;;chr19:46271505..46271575,-!p2@SIX5!0.94!20.32!SIX5;;chr17:53342311..53342400,+!p1@HLF!0.93!8.60!HLF;;chr1:164528340..164528379,+!p4@PBX1!0.92!18.76!PBX1;;chr11:64764435..64764449,-!p1@BATF2!0.92!10.16!BATF2;;chr11:47400078..47400106,-!p1@SPI1!0.90!7.03!SPI1;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.90!7.03!SEBOX;;chr2:68592406..68592424,+!p1@PLEK!0.90!7.03!PLEK;;chr19:46801639..46801699,+!p1@HIF3A!0.90!7.03!HIF3A;;chr20:18038521..18038571,-!p1@OVOL2!0.90!7.03!OVOL2;;chr1:40367530..40367597,-!p1@MYCL1!0.89!12.50!MYCL1;;chr1:164528687..164528711,+!p6@PBX1!0.88!7.82!PBX1;;chr1:8763296..8763339,-!p9@RERE!0.87!16.41!RERE;;chr10:43134001..43134026,-!p1@ZNF33B!0.86!29.70!ZNF33B;;chr2:66662895..66662907,+!p3@MEIS1!0.86!7.82!MEIS1;;chr20:22565370..22565388,-!p2@FOXA2!0.86!6.25!FOXA2;;chr5:50679228..50679288,+!p1@ISL1!0.86!6.25!ISL1;;chr7:63505799..63505904,+!p1@ZNF727!0.86!6.25!ZNF727;;chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!0.86!6.25!SEBOX;;chrY:2803415..2803468,+!p1@ZFY!0.86!6.25!ZFY;;chr1:61548225..61548299,+!p1@NFIA!0.85!85.19!NFIA;;chr10:94449703..94449718,+!p1@HHEX!0.85!25.01!HHEX;;chr3:71632864..71632885,-!p4@FOXP1!0.84!21.10!FOXP1;;chr6:19837592..19837621,+!p1@ID4!0.83!37.51!ID4;;chr2:46524897..46524911,+!p2@EPAS1!0.83!17.19!EPAS1;;chr8:28347737..28347785,-!p1@FBXO16,p2@ZNF395!0.82!12.50!ZNF395;;chr12:3068501..30685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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000949;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001264;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002075;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002323 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/pancreas%252c%2520adult%252c%2520donor1.CNhs11756.10049-101G4.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/pancreas%252c%2520adult%252c%2520donor1.CNhs11756.10049-101G4.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/pancreas%252c%2520adult%252c%2520donor1.CNhs11756.10049-101G4.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/pancreas%252c%2520adult%252c%2520donor1.CNhs11756.10049-101G4.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/pancreas%252c%2520adult%252c%2520donor1.CNhs11756.10049-101G4.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10049-101G4 | |id=FF:10049-101G4 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0010049 | ||
|is_obsolete= | |||
|library_id=CNhs11756 | |||
|library_id_phase_based=2:CNhs11756 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10049 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10049 | |||
|name=pancreas, adult, donor1 | |name=pancreas, adult, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11756,LSID820,release009,COMPLETED | |profile_hcage=CNhs11756,LSID820,release009,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0,0.583102375810422,0.482079918814505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657621414098493,0,0,0,0,0,0.152831346067188,0,0,0.117832652556383,0,0,0,0,0,0,0,0,0,0,0,0,0.289573104473946,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.250789242335245,0,0.0461694166854749,0.250789242335245,0.5185427615316,0,0,0.153445615122148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197348061791456,0,0,0,0,0,0.0422476503790572,0.307892858736162,0.125394621167623,0,0.0388628201791381,0.0239183180983518,-0.0068207254453578,0.125394621167623,0,0,0,-0.0980353512377064,0.313978606722627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165794735312751,0,0,0,0.297149335126925,0.377449162113414,0,0,0,0,0,0 | |||
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| |||
|rna_box=101 | |rna_box=101 | ||
|rna_catalog_number=Cat:636577 | |rna_catalog_number=Cat:636577 | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=50 | |rna_weight_ug=50 | ||
|sample_age= | |sample_age= | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 77: | Line 99: | ||
|sample_tissue=pancreas | |sample_tissue=pancreas | ||
|top_motifs=NR5A1,2:3.88658998095;MYOD1:3.79731205672;HNF1A:3.15665538875;ATF6:2.79243369411;RXRA_VDR{dimer}:2.75913549536;SNAI1..3:2.54982649934;TOPORS:2.49429937987;ZEB1:2.45607888976;HAND1,2:2.3517989704;TLX2:2.32113702444;EN1,2:2.30920648479;LMO2:2.28888884149;GATA6:2.27976599436;XBP1:1.93940526167;ONECUT1,2:1.74995911545;FOXA2:1.74540878542;GCM1,2:1.68985702141;TBP:1.66777778009;RBPJ:1.64547234404;STAT5{A,B}:1.51276132928;FOX{D1,D2}:1.40511665756;MTF1:1.38478587138;AIRE:1.36439824287;DBP:1.293088442;NR6A1:1.25531322683;AR:1.23814121052;PITX1..3:1.21379766402;ALX1:1.18967429088;NKX6-1,2:1.14227118276;ZNF423:1.12673183513;TAL1_TCF{3,4,12}:1.10409549591;bHLH_family:1.09838200643;FOXO1,3,4:0.995949284488;TFAP2{A,C}:0.969670885355;NR1H4:0.954820460362;POU6F1:0.916479525501;BPTF:0.897809431429;EP300:0.888836374346;VSX1,2:0.851560301114;FOXP1:0.829219983073;SP1:0.82578952951;ESRRA:0.799596480553;TFAP4:0.743063612836;HMX1:0.709434502866;ARID5B:0.696942532417;NKX2-3_NKX2-5:0.69360836565;PBX1:0.674514457173;FOX{F1,F2,J1}:0.672721779939;BREu{core}:0.655684227885;CUX2:0.644004728599;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.633528275818;HNF4A_NR2F1,2:0.628808383231;IKZF1:0.628474881337;TFAP2B:0.584705510193;YY1:0.575749634115;MAFB:0.510151195751;HIC1:0.509315738216;STAT2,4,6:0.474692724878;PAX6:0.430947843518;GTF2A1,2:0.421295673424;LHX3,4:0.394335329803;MED-1{core}:0.38881471836;NKX3-2:0.344665951028;FOX{I1,J2}:0.317819957708;FOXD3:0.305064473179;ADNP_IRX_SIX_ZHX:0.288179445196;FOXN1:0.254557601562;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.238740797863;MTE{core}:0.231842518812;TFCP2:0.231264865429;GLI1..3:0.228070916328;CDC5L:0.209273279238;MYFfamily:0.184595228767;STAT1,3:0.152932589161;REST:0.146991061391;ZFP161:0.12830499897;T:0.118341765984;MEF2{A,B,C,D}:0.114309228291;PAX1,9:0.112280188186;XCPE1{core}:0.110671895645;NKX2-2,8:0.10007017097;HLF:0.0889216600616;TLX1..3_NFIC{dimer}:0.0885684483381;ZNF238:0.0700447311619;NHLH1,2:0.0364500144073;EGR1..3:-0.0125018469951;NFIX:-0.0145700814043;POU3F1..4:-0.0165726383635;TEAD1:-0.0201618213033;HOXA9_MEIS1:-0.0285898353809;FOXM1:-0.0615484910168;GTF2I:-0.0985705979566;CREB1:-0.124112927007;IRF7:-0.155966819871;FOXL1:-0.157079993212;ZNF143:-0.16968761749;SOX5:-0.171190141609;IKZF2:-0.18513216971;HOX{A6,A7,B6,B7}:-0.266833753593;UFEwm:-0.274165156054;JUN:-0.279728135355;HES1:-0.289734620416;TP53:-0.294682789268;NFIL3:-0.313870700163;CEBPA,B_DDIT3:-0.322263959709;MAZ:-0.323349975656;PATZ1:-0.323846246406;CDX1,2,4:-0.352195444628;NFKB1_REL_RELA:-0.355257441935;SPZ1:-0.356849902858;RFX1:-0.368267512497;HIF1A:-0.37116278575;ELK1,4_GABP{A,B1}:-0.374694966424;MYBL2:-0.376456237345;PDX1:-0.37902712538;ATF5_CREB3:-0.385613269489;ELF1,2,4:-0.385888235488;SMAD1..7,9:-0.388612963673;ATF4:-0.409111865772;AHR_ARNT_ARNT2:-0.413567922592;RREB1:-0.442039424469;ZNF148:-0.459333886693;SOX2:-0.464841798342;GATA4:-0.472284564994;GFI1B:-0.478796492165;ETS1,2:-0.487549619856;POU2F1..3:-0.505467650539;NFY{A,B,C}:-0.514091051827;ZBTB16:-0.52560220338;RUNX1..3:-0.539704553362;SREBF1,2:-0.546194312847;GZF1:-0.554963448972;ZBTB6:-0.564918440767;NRF1:-0.590165540959;PAX3,7:-0.595691623533;BACH2:-0.608286008214;NANOG{mouse}:-0.616919102725;PRDM1:-0.619922034098;TBX4,5:-0.626458336586;ATF2:-0.631171197084;SPI1:-0.666472346484;FOXP3:-0.681903111152;PPARG:-0.687778436095;FOS_FOS{B,L1}_JUN{B,D}:-0.693666005725;PAX5:-0.711223719645;NFE2:-0.717446220196;SPIB:-0.72154382459;IRF1,2:-0.727806456612;ESR1:-0.779392691778;OCT4_SOX2{dimer}:-0.809127463464;GFI1:-0.848106777765;FOSL2:-0.876885354239;HSF1,2:-0.887636879759;SOX17:-0.897424093186;TGIF1:-0.90125639409;RORA:-0.91636152108;MZF1:-0.921604854464;RXR{A,B,G}:-0.931667910827;KLF4:-0.932353466539;RFX2..5_RFXANK_RFXAP:-0.934227820269;ALX4:-0.966373494619;ZNF384:-0.979894388629;POU1F1:-0.983511676591;CRX:-1.00516297413;NFATC1..3:-1.00564439911;SOX{8,9,10}:-1.03666514012;NR3C1:-1.06921855915;HOX{A5,B5}:-1.13834248972;POU5F1:-1.14501266143;FOXQ1:-1.15815527431;SRF:-1.17720732387;NKX3-1:-1.19022901826;LEF1_TCF7_TCF7L1,2:-1.19484676616;EBF1:-1.22164292511;PAX2:-1.22347232646;E2F1..5:-1.23888795164;PRRX1,2:-1.26452817061;EVI1:-1.28744095847;ZIC1..3:-1.33555176149;HMGA1,2:-1.36580650646;NANOG:-1.42903469782;NFE2L1:-1.49857709231;NFE2L2:-1.50912498284;HOX{A4,D4}:-1.58366242219;TEF:-1.64749682385;MYB:-1.66501571244;NKX2-1,4:-1.68950529265;DMAP1_NCOR{1,2}_SMARC:-1.69617735307;PAX4:-1.77296485417;HBP1_HMGB_SSRP1_UBTF:-2.00284073667;TFDP1:-2.02619530717;PAX8:-2.14498548402 | |top_motifs=NR5A1,2:3.88658998095;MYOD1:3.79731205672;HNF1A:3.15665538875;ATF6:2.79243369411;RXRA_VDR{dimer}:2.75913549536;SNAI1..3:2.54982649934;TOPORS:2.49429937987;ZEB1:2.45607888976;HAND1,2:2.3517989704;TLX2:2.32113702444;EN1,2:2.30920648479;LMO2:2.28888884149;GATA6:2.27976599436;XBP1:1.93940526167;ONECUT1,2:1.74995911545;FOXA2:1.74540878542;GCM1,2:1.68985702141;TBP:1.66777778009;RBPJ:1.64547234404;STAT5{A,B}:1.51276132928;FOX{D1,D2}:1.40511665756;MTF1:1.38478587138;AIRE:1.36439824287;DBP:1.293088442;NR6A1:1.25531322683;AR:1.23814121052;PITX1..3:1.21379766402;ALX1:1.18967429088;NKX6-1,2:1.14227118276;ZNF423:1.12673183513;TAL1_TCF{3,4,12}:1.10409549591;bHLH_family:1.09838200643;FOXO1,3,4:0.995949284488;TFAP2{A,C}:0.969670885355;NR1H4:0.954820460362;POU6F1:0.916479525501;BPTF:0.897809431429;EP300:0.888836374346;VSX1,2:0.851560301114;FOXP1:0.829219983073;SP1:0.82578952951;ESRRA:0.799596480553;TFAP4:0.743063612836;HMX1:0.709434502866;ARID5B:0.696942532417;NKX2-3_NKX2-5:0.69360836565;PBX1:0.674514457173;FOX{F1,F2,J1}:0.672721779939;BREu{core}:0.655684227885;CUX2:0.644004728599;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.633528275818;HNF4A_NR2F1,2:0.628808383231;IKZF1:0.628474881337;TFAP2B:0.584705510193;YY1:0.575749634115;MAFB:0.510151195751;HIC1:0.509315738216;STAT2,4,6:0.474692724878;PAX6:0.430947843518;GTF2A1,2:0.421295673424;LHX3,4:0.394335329803;MED-1{core}:0.38881471836;NKX3-2:0.344665951028;FOX{I1,J2}:0.317819957708;FOXD3:0.305064473179;ADNP_IRX_SIX_ZHX:0.288179445196;FOXN1:0.254557601562;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.238740797863;MTE{core}:0.231842518812;TFCP2:0.231264865429;GLI1..3:0.228070916328;CDC5L:0.209273279238;MYFfamily:0.184595228767;STAT1,3:0.152932589161;REST:0.146991061391;ZFP161:0.12830499897;T:0.118341765984;MEF2{A,B,C,D}:0.114309228291;PAX1,9:0.112280188186;XCPE1{core}:0.110671895645;NKX2-2,8:0.10007017097;HLF:0.0889216600616;TLX1..3_NFIC{dimer}:0.0885684483381;ZNF238:0.0700447311619;NHLH1,2:0.0364500144073;EGR1..3:-0.0125018469951;NFIX:-0.0145700814043;POU3F1..4:-0.0165726383635;TEAD1:-0.0201618213033;HOXA9_MEIS1:-0.0285898353809;FOXM1:-0.0615484910168;GTF2I:-0.0985705979566;CREB1:-0.124112927007;IRF7:-0.155966819871;FOXL1:-0.157079993212;ZNF143:-0.16968761749;SOX5:-0.171190141609;IKZF2:-0.18513216971;HOX{A6,A7,B6,B7}:-0.266833753593;UFEwm:-0.274165156054;JUN:-0.279728135355;HES1:-0.289734620416;TP53:-0.294682789268;NFIL3:-0.313870700163;CEBPA,B_DDIT3:-0.322263959709;MAZ:-0.323349975656;PATZ1:-0.323846246406;CDX1,2,4:-0.352195444628;NFKB1_REL_RELA:-0.355257441935;SPZ1:-0.356849902858;RFX1:-0.368267512497;HIF1A:-0.37116278575;ELK1,4_GABP{A,B1}:-0.374694966424;MYBL2:-0.376456237345;PDX1:-0.37902712538;ATF5_CREB3:-0.385613269489;ELF1,2,4:-0.385888235488;SMAD1..7,9:-0.388612963673;ATF4:-0.409111865772;AHR_ARNT_ARNT2:-0.413567922592;RREB1:-0.442039424469;ZNF148:-0.459333886693;SOX2:-0.464841798342;GATA4:-0.472284564994;GFI1B:-0.478796492165;ETS1,2:-0.487549619856;POU2F1..3:-0.505467650539;NFY{A,B,C}:-0.514091051827;ZBTB16:-0.52560220338;RUNX1..3:-0.539704553362;SREBF1,2:-0.546194312847;GZF1:-0.554963448972;ZBTB6:-0.564918440767;NRF1:-0.590165540959;PAX3,7:-0.595691623533;BACH2:-0.608286008214;NANOG{mouse}:-0.616919102725;PRDM1:-0.619922034098;TBX4,5:-0.626458336586;ATF2:-0.631171197084;SPI1:-0.666472346484;FOXP3:-0.681903111152;PPARG:-0.687778436095;FOS_FOS{B,L1}_JUN{B,D}:-0.693666005725;PAX5:-0.711223719645;NFE2:-0.717446220196;SPIB:-0.72154382459;IRF1,2:-0.727806456612;ESR1:-0.779392691778;OCT4_SOX2{dimer}:-0.809127463464;GFI1:-0.848106777765;FOSL2:-0.876885354239;HSF1,2:-0.887636879759;SOX17:-0.897424093186;TGIF1:-0.90125639409;RORA:-0.91636152108;MZF1:-0.921604854464;RXR{A,B,G}:-0.931667910827;KLF4:-0.932353466539;RFX2..5_RFXANK_RFXAP:-0.934227820269;ALX4:-0.966373494619;ZNF384:-0.979894388629;POU1F1:-0.983511676591;CRX:-1.00516297413;NFATC1..3:-1.00564439911;SOX{8,9,10}:-1.03666514012;NR3C1:-1.06921855915;HOX{A5,B5}:-1.13834248972;POU5F1:-1.14501266143;FOXQ1:-1.15815527431;SRF:-1.17720732387;NKX3-1:-1.19022901826;LEF1_TCF7_TCF7L1,2:-1.19484676616;EBF1:-1.22164292511;PAX2:-1.22347232646;E2F1..5:-1.23888795164;PRRX1,2:-1.26452817061;EVI1:-1.28744095847;ZIC1..3:-1.33555176149;HMGA1,2:-1.36580650646;NANOG:-1.42903469782;NFE2L1:-1.49857709231;NFE2L2:-1.50912498284;HOX{A4,D4}:-1.58366242219;TEF:-1.64749682385;MYB:-1.66501571244;NKX2-1,4:-1.68950529265;DMAP1_NCOR{1,2}_SMARC:-1.69617735307;PAX4:-1.77296485417;HBP1_HMGB_SSRP1_UBTF:-2.00284073667;TFDP1:-2.02619530717;PAX8:-2.14498548402 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10049-101G4;search_select_hide=table117:FF:10049-101G4 | |||
}} | }} | ||
Latest revision as of 12:17, 3 June 2020
| Name: | pancreas, adult, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11756 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11756
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11756
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.422 |
| 10 | 10 | 0.217 |
| 100 | 100 | 0.367 |
| 101 | 101 | 0.409 |
| 102 | 102 | 0.886 |
| 103 | 103 | 0.973 |
| 104 | 104 | 0.318 |
| 105 | 105 | 0.569 |
| 106 | 106 | 0.104 |
| 107 | 107 | 0.0483 |
| 108 | 108 | 0.504 |
| 109 | 109 | 0.356 |
| 11 | 11 | 0.445 |
| 110 | 110 | 0.775 |
| 111 | 111 | 0.828 |
| 112 | 112 | 0.096 |
| 113 | 113 | 0.527 |
| 114 | 114 | 0.987 |
| 115 | 115 | 0.391 |
| 116 | 116 | 0.0248 |
| 117 | 117 | 0.281 |
| 118 | 118 | 0.411 |
| 119 | 119 | 0.0146 |
| 12 | 12 | 0.636 |
| 120 | 120 | 0.303 |
| 121 | 121 | 0.381 |
| 122 | 122 | 0.221 |
| 123 | 123 | 2.14847e-4 |
| 124 | 124 | 0.694 |
| 125 | 125 | 0.539 |
| 126 | 126 | 0.843 |
| 127 | 127 | 0.753 |
| 128 | 128 | 0.0707 |
| 129 | 129 | 0.893 |
| 13 | 13 | 0.174 |
| 130 | 130 | 0.233 |
| 131 | 131 | 0.438 |
| 132 | 132 | 0.0397 |
| 133 | 133 | 0.379 |
| 134 | 134 | 0.738 |
| 135 | 135 | 0.71 |
| 136 | 136 | 0.738 |
| 137 | 137 | 0.0333 |
| 138 | 138 | 0.818 |
| 139 | 139 | 0.329 |
| 14 | 14 | 0.52 |
| 140 | 140 | 0.817 |
| 141 | 141 | 0.578 |
| 142 | 142 | 0.572 |
| 143 | 143 | 0.0256 |
| 144 | 144 | 0.773 |
| 145 | 145 | 0.149 |
| 146 | 146 | 0.232 |
| 147 | 147 | 0.693 |
| 148 | 148 | 0.674 |
| 149 | 149 | 0.302 |
| 15 | 15 | 0.736 |
| 150 | 150 | 0.841 |
| 151 | 151 | 0.0642 |
| 152 | 152 | 0.0281 |
| 153 | 153 | 0.138 |
| 154 | 154 | 0.402 |
| 155 | 155 | 0.325 |
| 156 | 156 | 0.577 |
| 157 | 157 | 0.637 |
| 158 | 158 | 0.733 |
| 159 | 159 | 0.211 |
| 16 | 16 | 0.798 |
| 160 | 160 | 0.734 |
| 161 | 161 | 0.907 |
| 162 | 162 | 0.585 |
| 163 | 163 | 0.268 |
| 164 | 164 | 0.621 |
| 165 | 165 | 0.942 |
| 166 | 166 | 0.529 |
| 167 | 167 | 0.811 |
| 168 | 168 | 0.858 |
| 169 | 169 | 0.0127 |
| 17 | 17 | 0.692 |
| 18 | 18 | 0.271 |
| 19 | 19 | 0.0214 |
| 2 | 2 | 0.0534 |
| 20 | 20 | 0.394 |
| 21 | 21 | 0.131 |
| 22 | 22 | 0.997 |
| 23 | 23 | 0.896 |
| 24 | 24 | 0.976 |
| 25 | 25 | 0.761 |
| 26 | 26 | 0.0772 |
| 27 | 27 | 0.629 |
| 28 | 28 | 0.979 |
| 29 | 29 | 0.332 |
| 3 | 3 | 0.655 |
| 30 | 30 | 0.423 |
| 31 | 31 | 0.377 |
| 32 | 32 | 0.592 |
| 33 | 33 | 0.85 |
| 34 | 34 | 0.797 |
| 35 | 35 | 0.576 |
| 36 | 36 | 0.487 |
| 37 | 37 | 0.828 |
| 38 | 38 | 0.212 |
| 39 | 39 | 0.501 |
| 4 | 4 | 0.79 |
| 40 | 40 | 0.587 |
| 41 | 41 | 0.0153 |
| 42 | 42 | 0.712 |
| 43 | 43 | 0.414 |
| 44 | 44 | 0.662 |
| 45 | 45 | 0.582 |
| 46 | 46 | 0.648 |
| 47 | 47 | 0.63 |
| 48 | 48 | 0.3 |
| 49 | 49 | 0.0875 |
| 5 | 5 | 0.9 |
| 50 | 50 | 0.816 |
| 51 | 51 | 0.933 |
| 52 | 52 | 0.238 |
| 53 | 53 | 0.607 |
| 54 | 54 | 0.363 |
| 55 | 55 | 0.916 |
| 56 | 56 | 0.602 |
| 57 | 57 | 0.722 |
| 58 | 58 | 0.558 |
| 59 | 59 | 0.203 |
| 6 | 6 | 0.746 |
| 60 | 60 | 0.288 |
| 61 | 61 | 0.821 |
| 62 | 62 | 0.776 |
| 63 | 63 | 0.411 |
| 64 | 64 | 0.46 |
| 65 | 65 | 0.213 |
| 66 | 66 | 0.0875 |
| 67 | 67 | 0.223 |
| 68 | 68 | 0.146 |
| 69 | 69 | 0.566 |
| 7 | 7 | 0.209 |
| 70 | 70 | 0.334 |
| 71 | 71 | 0.434 |
| 72 | 72 | 0.658 |
| 73 | 73 | 0.163 |
| 74 | 74 | 0.0211 |
| 75 | 75 | 0.445 |
| 76 | 76 | 0.768 |
| 77 | 77 | 0.015 |
| 78 | 78 | 0.154 |
| 79 | 79 | 0.715 |
| 8 | 8 | 0.134 |
| 80 | 80 | 0.261 |
| 81 | 81 | 0.894 |
| 82 | 82 | 0.636 |
| 83 | 83 | 0.498 |
| 84 | 84 | 0.424 |
| 85 | 85 | 0.0459 |
| 86 | 86 | 0.407 |
| 87 | 87 | 0.856 |
| 88 | 88 | 0.371 |
| 89 | 89 | 0.358 |
| 9 | 9 | 0.401 |
| 90 | 90 | 0.144 |
| 91 | 91 | 0.14 |
| 92 | 92 | 0.129 |
| 93 | 93 | 0.932 |
| 94 | 94 | 0.0533 |
| 95 | 95 | 0.826 |
| 96 | 96 | 0.506 |
| 97 | 97 | 0.637 |
| 98 | 98 | 0.563 |
| 99 | 99 | 0.456 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11756
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010049 human pancreas - adult sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0001264 (pancreas)
0002100 (trunk)
0000479 (tissue)
0000466 (immaterial anatomical entity)
0002075 (viscus)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002323 (body cavity)
0005177 (trunk region element)
0000464 (anatomical space)
0004458 (body cavity or lining)
0000949 (endocrine system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010049 (human pancreas - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
