FF:10100-102D1: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@SAMD00005111 | |||
|accession_numbers=CAGE;DRX008756;DRR009628;DRZ001053;DRZ002438;DRZ012403;DRZ013788 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000995,UBERON:0006834,UBERON:0003134,UBERON:0000479,UBERON:0005156,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0003975,UBERON:0004175,UBERON:0010317,UBERON:0003100,UBERON:0000474 | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000995,UBERON:0006834,UBERON:0003134,UBERON:0000479,UBERON:0005156,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0003975,UBERON:0004175,UBERON:0010317,UBERON:0003100,UBERON:0000474 | ||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase= | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr11:101000537..101000553,-!p1@PGR!2.20!156.71!PGR;;chr4:174451370..174451387,-!p1@HAND2!2.13!133.24!HAND2;;chr6:152128810..152128827,+!p2@ESR1!1.94!85.94!ESR1;;chr11:32457075..32457095,-!p1@WT1!1.94!85.57!WT1;;chr20:62680984..62680999,-!p1@SOX18!1.92!107.33!SOX18;;chr6:152126830..152126847,+!p4@ESR1!1.91!80.43!ESR1;;chr6:152126790..152126828,+!p3@ESR1!1.88!74.20!ESR1;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.82!65.15!PEG3;;chr7:27224795..27224840,-!p2@HOXA11!1.82!64.54!HOXA11;;chr1:40105299..40105326,-!p1@HEYL!1.81!64.30!HEYL;;chr9:16575347..16575359,-!p12@BNC2!1.80!62.10!BNC2;;chr7:27224842..27224872,-!p1@HOXA11!1.80!61.85!HOXA11;;chr2:27371879..27371907,+!p1@TCF23!1.78!59.29!TCF23;;chr11:101000524..101000535,-!p3@PGR!1.75!55.50!PGR;;chr10:119302232..119302265,+!p1@EMX2!1.71!50.49!EMX2;;chr6:134210243..134210257,+!p1@TCF21!1.71!50.49!TCF21;;chr8:55370487..55370503,+!p1@SOX17!1.66!45.23!SOX17;;chr21:39870339..39870443,-!p1@ERG!1.64!42.78!ERG;;chr7:27192185..27192209,-!p1@HOXA3!1.63!41.93!HOXA3;;chr11:100999775..100999800,-!p2@PGR!1.62!40.83!PGR;;chr19:46801639..46801699,+!p1@HIF3A!1.62!40.46!HIF3A;;chr12:52437488..52437507,+!p2@NR4A1!1.60!39.12!NR4A1;;chr11:32457413..32457431,-!p2@WT1!1.56!35.69!WT1;;chr3:128212033..128212051,-!p1@GATA2!1.56!34.96!GATA2;;chr9:77112244..77112262,+!p1@RORB!1.52!35.69!RORB;;chr2:177001290..177001315,+!p1@HOXD3!1.50!30.32!HOXD3;;chr3:69788576..69788648,+!p1@MITF!1.49!152.80!MITF;;chr8:99956662..99956684,+!p1@OSR2!1.49!45.84!OSR2;;chr15:37390850..37390909,-!p3@MEIS2!1.47!55.25!MEIS2;;chr11:100999802..100999819,-!p4@PGR!1.47!28.36!PGR;;chr12:52445218..52445237,+!p1@NR4A1!1.43!313.92!NR4A1;;chr7:27213893..27213954,-!p1@HOXA10!1.42!25.30!HOXA10;;chr2:176981499..176981522,+!p2@HOXD10!1.41!24.69!HOXD10;;chr7:44143925..44143970,+!p1@AEBP1!1.40!515.98!AEBP1;;chr9:16870659..16870675,-!p2@BNC2!1.40!29.22!BNC2;;chr6:19837592..19837621,+!p1@ID4!1.38!137.03!ID4;;chr10:119302268..119302282,+!p4@EMX2!1.38!22.98!EMX2;;chr8:106330656..106330684,+!p1@ZFPM2!1.37!57.94!ZFPM2;;chr11:113930425..113930471,+!p1@ZBTB16!1.37!32.15!ZBTB16;;chr10:119302508..119302559,+!p5@EMX2!1.37!22.37!EMX2;;chr2:27371919..27371935,+!p2@TCF23!1.37!22.25!TCF23;;chr2:66662281..66662308,+!p1@MEIS1!1.36!74.69!MEIS1;;chr2:166326200..166326216,+!p1@CSRNP3!1.36!31.91!CSRNP3;;chr3:169381420..169381535,-!p1@MECOM!1.36!25.30!MECOM;;chr22:41763452..41763466,+!p2@TEF!1.36!21.88!TEF;;chr7:63505799..63505904,+!p1@ZNF727!1.35!21.15!ZNF727;;chr4:174450089..174450153,-!p2@HAND2!1.33!20.29!HAND2;;chr2:176973498..176973524,+!p1@HOXD10!1.32!19.68!HOXD10;;chr6:152128782..152128803,+!p5@ESR1!1.31!19.31!ESR1;;chr11:34642612..34642646,+!p1@EHF!1.31!19.19!EHF;;chrX:66763856..66763896,+!p1@AR!1.30!27.26!AR;;chr1:170633348..170633399,+!p2@PRRX1!1.30!25.67!PRRX1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.30!18.83!ZBED1;;chr1:164528911..164528940,+!p7@PBX1!1.29!27.26!PBX1;;chr7:96654133..96654150,-!p1@DLX5!1.29!18.70!DLX5;;chr1:164528942..164528964,+!p11@PBX1!1.28!18.21!PBX1;;chr5:71803177..71803255,-!p1@ZNF366!1.28!17.85!ZNF366;;chr11:101000445..101000465,-!p5@PGR!1.27!17.60!PGR;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.27!17.60!HOXC5;;chr17:53342311..53342400,+!p1@HLF!1.26!19.80!HLF;;chr5:88178983..88179012,-!p1@MEF2C!1.25!127.74!MEF2C;;chr1:164528445..164528459,+!p2@PBX1!1.25!51.46!PBX1;;chr1:170633058..170633084,+!p5@PRRX1!1.25!16.75!PRRX1;;chr1:164528410..164528428,+!p1@PBX1!1.24!119.31!PBX1;;chr9:114287433..114287513,+!p1@ZNF483!1.24!41.68!ZNF483;;chr1:170632959..170632987,+!p4@PRRX1!1.24!17.85!PRRX1;;chr2:27371866..27371878,+!p3@TCF23!1.23!16.01!TCF23;;chr7:44143978..44143989,+!p2@AEBP1!1.22!28.48!AEBP1;;chr5:158526459..158526481,-!p2@EBF1!1.22!20.78!EBF1;;chr15:96869222..96869251,+!p18@NR2F2!1.22!18.21!NR2F2;;chr7:42276787..42276815,-!p1@GLI3!1.21!40.71!GLI3;;chr20:51588873..51588953,+!p1@TSHZ2!1.21!20.29!TSHZ2;;chr8:10588010..10588030,-!p1@SOX7!1.21!15.04!SOX7;;chr10:119302182..119302196,+!p6@EMX2!1.20!14.91!EMX2;;chr15:96873984..96873999,+!p3@NR2F2!1.18!103.05!NR2F2;;chr13:72441315..72441454,-!p1@DACH1!1.18!27.99!DACH1;;chr18:19749541..19749557,+!p1@GATA6!1.17!43.15!GATA6;;chr2:145277882..145277967,-!p3@ZEB2!1.17!23.96!ZEB2;;chr1:164529004..164529015,+!p15@PBX1!1.17!13.94!PBX1;;chr20:30433396..30433414,-!p1@FOXS1!1.17!13.94!FOXS1;;chr3:128206762..128206781,-!p2@GATA2!1.16!83.00!GATA2;;chr3:114819124..114819200,-!p3@ZBTB20!1.16!31.05!ZBTB20;;chr15:96874012..96874042,+!p2@NR2F2!1.15!116.86!NR2F2;;chr18:22932080..22932170,-!p1@ZNF521!1.15!55.25!ZNF521;;chr2:66662249..66662267,+!p2@MEIS1!1.15!50.61!MEIS1;;chr12:96588368..96588394,+!p3@ELK3!1.15!35.57!ELK3;;chr20:2673383..2673441,+!p1@EBF4!1.15!20.78!EBF4;;chr10:114710244..114710257,+!p3@TCF7L2!1.14!34.35!TCF7L2;;chr5:92919100..92919135,+!p3@NR2F1!1.14!15.52!NR2F1;;chr11:128457446..128457461,-!p4@ETS1!1.14!12.71!ETS1;;chr15:96869255..96869291,+!p6@NR2F2!1.13!22.98!NR2F2;;chr17:46682321..46682362,-!p1@HOXB6!1.13!12.35!HOXB6;;chr5:158526917..15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| |expression_enrichment_score=chr11:101000537..101000553,-!p1@PGR!2.20!156.71!PGR;;chr4:174451370..174451387,-!p1@HAND2!2.13!133.24!HAND2;;chr6:152128810..152128827,+!p2@ESR1!1.94!85.94!ESR1;;chr11:32457075..32457095,-!p1@WT1!1.94!85.57!WT1;;chr20:62680984..62680999,-!p1@SOX18!1.92!107.33!SOX18;;chr6:152126830..152126847,+!p4@ESR1!1.91!80.43!ESR1;;chr6:152126790..152126828,+!p3@ESR1!1.88!74.20!ESR1;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.82!65.15!PEG3;;chr7:27224795..27224840,-!p2@HOXA11!1.82!64.54!HOXA11;;chr1:40105299..40105326,-!p1@HEYL!1.81!64.30!HEYL;;chr9:16575347..16575359,-!p12@BNC2!1.80!62.10!BNC2;;chr7:27224842..27224872,-!p1@HOXA11!1.80!61.85!HOXA11;;chr2:27371879..27371907,+!p1@TCF23!1.78!59.29!TCF23;;chr11:101000524..101000535,-!p3@PGR!1.75!55.50!PGR;;chr10:119302232..119302265,+!p1@EMX2!1.71!50.49!EMX2;;chr6:134210243..134210257,+!p1@TCF21!1.71!50.49!TCF21;;chr8:55370487..55370503,+!p1@SOX17!1.66!45.23!SOX17;;chr21:39870339..39870443,-!p1@ERG!1.64!42.78!ERG;;chr7:27192185..27192209,-!p1@HOXA3!1.63!41.93!HOXA3;;chr11:100999775..100999800,-!p2@PGR!1.62!40.83!PGR;;chr19:46801639..46801699,+!p1@HIF3A!1.62!40.46!HIF3A;;chr12:52437488..52437507,+!p2@NR4A1!1.60!39.12!NR4A1;;chr11:32457413..32457431,-!p2@WT1!1.56!35.69!WT1;;chr3:128212033..128212051,-!p1@GATA2!1.56!34.96!GATA2;;chr9:77112244..77112262,+!p1@RORB!1.52!35.69!RORB;;chr2:177001290..177001315,+!p1@HOXD3!1.50!30.32!HOXD3;;chr3:69788576..69788648,+!p1@MITF!1.49!152.80!MITF;;chr8:99956662..99956684,+!p1@OSR2!1.49!45.84!OSR2;;chr15:37390850..37390909,-!p3@MEIS2!1.47!55.25!MEIS2;;chr11:100999802..100999819,-!p4@PGR!1.47!28.36!PGR;;chr12:52445218..52445237,+!p1@NR4A1!1.43!313.92!NR4A1;;chr7:27213893..27213954,-!p1@HOXA10!1.42!25.30!HOXA10;;chr2:176981499..176981522,+!p2@HOXD10!1.41!24.69!HOXD10;;chr7:44143925..44143970,+!p1@AEBP1!1.40!515.98!AEBP1;;chr9:16870659..16870675,-!p2@BNC2!1.40!29.22!BNC2;;chr6:19837592..19837621,+!p1@ID4!1.38!137.03!ID4;;chr10:119302268..119302282,+!p4@EMX2!1.38!22.98!EMX2;;chr8:106330656..106330684,+!p1@ZFPM2!1.37!57.94!ZFPM2;;chr11:113930425..113930471,+!p1@ZBTB16!1.37!32.15!ZBTB16;;chr10:119302508..119302559,+!p5@EMX2!1.37!22.37!EMX2;;chr2:27371919..27371935,+!p2@TCF23!1.37!22.25!TCF23;;chr2:66662281..66662308,+!p1@MEIS1!1.36!74.69!MEIS1;;chr2:166326200..166326216,+!p1@CSRNP3!1.36!31.91!CSRNP3;;chr3:169381420..169381535,-!p1@MECOM!1.36!25.30!MECOM;;chr22:41763452..41763466,+!p2@TEF!1.36!21.88!TEF;;chr7:63505799..63505904,+!p1@ZNF727!1.35!21.15!ZNF727;;chr4:174450089..174450153,-!p2@HAND2!1.33!20.29!HAND2;;chr2:176973498..176973524,+!p1@HOXD10!1.32!19.68!HOXD10;;chr6:152128782..152128803,+!p5@ESR1!1.31!19.31!ESR1;;chr11:34642612..34642646,+!p1@EHF!1.31!19.19!EHF;;chrX:66763856..66763896,+!p1@AR!1.30!27.26!AR;;chr1:170633348..170633399,+!p2@PRRX1!1.30!25.67!PRRX1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.30!18.83!ZBED1;;chr1:164528911..164528940,+!p7@PBX1!1.29!27.26!PBX1;;chr7:96654133..96654150,-!p1@DLX5!1.29!18.70!DLX5;;chr1:164528942..164528964,+!p11@PBX1!1.28!18.21!PBX1;;chr5:71803177..71803255,-!p1@ZNF366!1.28!17.85!ZNF366;;chr11:101000445..101000465,-!p5@PGR!1.27!17.60!PGR;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.27!17.60!HOXC5;;chr17:53342311..53342400,+!p1@HLF!1.26!19.80!HLF;;chr5:88178983..88179012,-!p1@MEF2C!1.25!127.74!MEF2C;;chr1:164528445..164528459,+!p2@PBX1!1.25!51.46!PBX1;;chr1:170633058..170633084,+!p5@PRRX1!1.25!16.75!PRRX1;;chr1:164528410..164528428,+!p1@PBX1!1.24!119.31!PBX1;;chr9:114287433..114287513,+!p1@ZNF483!1.24!41.68!ZNF483;;chr1:170632959..170632987,+!p4@PRRX1!1.24!17.85!PRRX1;;chr2:27371866..27371878,+!p3@TCF23!1.23!16.01!TCF23;;chr7:44143978..44143989,+!p2@AEBP1!1.22!28.48!AEBP1;;chr5:158526459..158526481,-!p2@EBF1!1.22!20.78!EBF1;;chr15:96869222..96869251,+!p18@NR2F2!1.22!18.21!NR2F2;;chr7:42276787..42276815,-!p1@GLI3!1.21!40.71!GLI3;;chr20:51588873..51588953,+!p1@TSHZ2!1.21!20.29!TSHZ2;;chr8:10588010..10588030,-!p1@SOX7!1.21!15.04!SOX7;;chr10:119302182..119302196,+!p6@EMX2!1.20!14.91!EMX2;;chr15:96873984..96873999,+!p3@NR2F2!1.18!103.05!NR2F2;;chr13:72441315..72441454,-!p1@DACH1!1.18!27.99!DACH1;;chr18:19749541..19749557,+!p1@GATA6!1.17!43.15!GATA6;;chr2:145277882..145277967,-!p3@ZEB2!1.17!23.96!ZEB2;;chr1:164529004..164529015,+!p15@PBX1!1.17!13.94!PBX1;;chr20:30433396..30433414,-!p1@FOXS1!1.17!13.94!FOXS1;;chr3:128206762..128206781,-!p2@GATA2!1.16!83.00!GATA2;;chr3:114819124..114819200,-!p3@ZBTB20!1.16!31.05!ZBTB20;;chr15:96874012..96874042,+!p2@NR2F2!1.15!116.86!NR2F2;;chr18:22932080..22932170,-!p1@ZNF521!1.15!55.25!ZNF521;;chr2:66662249..66662267,+!p2@MEIS1!1.15!50.61!MEIS1;;chr12:96588368..96588394,+!p3@ELK3!1.15!35.57!ELK3;;chr20:2673383..2673441,+!p1@EBF4!1.15!20.78!EBF4;;chr10:114710244..114710257,+!p3@TCF7L2!1.14!34.35!TCF7L2;;chr5:92919100..92919135,+!p3@NR2F1!1.14!15.52!NR2F1;;chr11:128457446..128457461,-!p4@ETS1!1.14!12.71!ETS1;;chr15:96869255..96869291,+!p6@NR2F2!1.13!22.98!NR2F2;;chr17:46682321..46682362,-!p1@HOXB6!1.13!12.35!HOXB6;;chr5:158526917..158526932,-!p1@EBF1!1.12!30.56!EBF1;;chr11:61520075..61520136,+!p1@C11orf9!1.12!25.67!C11orf9;;chr11:113930401..113930422,+!p3@ZBTB16!1.12!12.10!ZBTB16;;chr2:176969228..176969260,+!p1@HOXD11!1.12!12.10!HOXD11;;chr5:92918919..92918942,+!p1@NR2F1!1.11!52.69!NR2F1;;chr1:170632285..170632309,+!p1@PRRX1!1.11!13.45!PRRX1;;chr2:19558373..19558392,-!p1@OSR1!1.10!31.78!OSR1;;chr1:61548374..61548415,+!p4@NFIA!1.10!21.51!NFIA;;chr7:113726357..113726443,+!p1@FOXP2!1.10!20.17!FOXP2;;chr6:152128325..152128339,+!p10@ESR1!1.10!11.61!ESR1;;chr3:141151009..141151033,+!p10@ZBTB38!1.09!11.25!ZBTB38;;chr12:80085061..80085119,-!p6@PAWR!1.08!17.48!PAWR;;chr11:128457492..128457506,-!p6@ETS1!1.08!11.12!ETS1;;chr1:164528384..164528409,+!p3@PBX1!1.07!33.49!PBX1;;chr15:42749722..42749739,-!p2@ZFP106!1.07!19.31!ZFP106;;chr2:176994408..176994492,+!p1@HOXD8!1.06!10.39!HOXD8;;chr1:8585945..8586056,-!p3@RERE!1.04!33.62!RERE;;chr17:7492684..7492778,-!p2@SOX15!1.04!21.39!SOX15;;chr3:141150883..141150961,+!p6@ZBTB38!1.04!9.90!ZBTB38;;chr17:38256799..38256815,-!p3@NR1D1!1.03!17.73!NR1D1;;chr3:42947600..42947680,+!p1@ZNF662!1.03!14.06!ZNF662;;chr7:44143997..44144008,+!p3@AEBP1!1.03!12.59!AEBP1;;chr8:106330696..106330719,+!p2@ZFPM2!1.03!12.59!ZFPM2;;chr7:15726243..15726293,-!p2@MEOX2!1.03!9.66!MEOX2;;chr1:44513995..44514031,+!p1@KLF17!1.03!9.66!KLF17;;chr13:41240717..41240735,-!p2@FOXO1!1.02!65.40!FOXO1;;chr4:4861385..4861398,+!p1@MSX1!1.02!28.85!MSX1;;chr9:16870710..16870763,-!p1@BNC2!1.02!16.62!BNC2;;chr11:113930291..113930339,+!p2@ZBTB16!1.02!15.77!ZBTB16;;chr18:53255839..53255854,-!p13@TCF4!1.02!11.12!TCF4;;chr1:164528975..164528998,+!p13@PBX1!1.02!9.53!PBX1;;chr7:27205136..27205164,-!p1@HOXA9!1.02!9.41!HOXA9;;chr10:119303078..119303169,+!p2@EMX2!1.02!9.41!EMX2;;chr19:16435625..16435682,+!p1@KLF2!1.01!302.67!KLF2;;chr4:174451350..174451363,-!p3@HAND2!1.01!9.29!HAND2;;chr2:176987463..176987479,+!p2@HOXD9!1.01!9.17!HOXD9;;chr1:8586084..8586100,-!p20@RERE!1.01!9.17!RERE;;chr17:38256822..38256851,-!p1@NR1D1!1.00!71.63!NR1D1;;chr20:50179368..50179392,-!p2@NFATC2!1.00!11.86!NFATC2;;chr3:138665937..138665968,-!p1@FOXL2!1.00!9.05!FOXL2;;chr16:51185172..51185197,-!p1@SALL1!1.00!9.05!SALL1;;chr1:170633262..170633285,+!p3@PRRX1!0.99!10.15!PRRX1;;chr18:53068911..53068935,-!p4@TCF4!0.99!10.02!TCF4;;chr10:119302352..119302362,+!p9@EMX2!0.99!8.80!EMX2;;chr11:100999697..100999708,-!p7@PGR!0.99!8.80!PGR;;chr2:176969097..176969109,+!p3@HOXD11!0.99!8.80!HOXD11;;chr2:66662396..66662407,+!p4@MEIS1!0.99!8.68!MEIS1;;chr13:41240737..41240787,-!p1@FOXO1!0.98!104.27!FOXO1;;chr6:126070769..126070801,+!p1@HEY2!0.98!10.02!HEY2;;chr14:33403881..33403924,+!p1@NPAS3!0.97!8.43!NPAS3;;chr15:96869165..96869183,+!p20@NR2F2!0.97!8.31!NR2F2;;chr17:6926362..6926377,+!p1@BCL6B!0.97!8.31!BCL6B;;chr18:19749386..19749404,+!p2@GATA6!0.96!11.74!GATA6;;chrX:56258844..56258882,+!p1@KLF8!0.96!11.49!KLF8;;chr6:152011654..152011682,+!p1@ESR1!0.96!8.19!ESR1;;chr10:63809106..63809127,+!p1@ARID5B!0.95!111.61!ARID5B;;chr16:79633894..79633954,-!p3@MAF!0.95!15.52!MAF;;chr3:25469724..25469773,+!p1@RARB!0.95!11.61!RARB;;chr12:24715376..24715432,-!p1@SOX5!0.95!10.02!SOX5;;chr16:85932760..85932775,+!p1@IRF8!0.95!7.82!IRF8;;chr18:52989081..52989117,-!p7@TCF4!0.94!12.10!TCF4;;chr1:214161272..214161322,+!p1@PROX1!0.94!11.00!PROX1;;chr8:93115274..93115323,-!p4@RUNX1T1!0.94!7.70!RUNX1T1;;chr15:96873921..96873946,+!p1@NR2F2!0.93!219.06!NR2F2;;chr7:28448965..28448994,+!p2@CREB5!0.93!27.26!CREB5;;chr1:164528616..164528660,+!p5@PBX1!0.93!15.89!PBX1;;chr15:96869292..96869320,+!p15@NR2F2!0.93!11.12!NR2F2;;chr2:208031943..208031978,-!p5@KLF7!0.93!10.27!KLF7;;chr1:201979743..201979762,+!p1@ELF3!0.93!7.58!ELF3;;chr11:47400078..47400106,-!p1@SPI1!0.93!7.46!SPI1;;chr1:204042233..204042249,+!p1@SOX13!0.92!48.04!SOX13;;chr15:57210961..57211012,+!p3@TCF12!0.92!24.20!TCF12;;chr1:23696308..23696339,-!p2@ZNF436!0.92!16.14!ZNF436;;chr19:38085768..38085821,+!p1@ZNF540!0.92!11.25!ZNF540;;chr2:176987441..176987454,+!p1@HOXD9!0.92!7.33!HOXD9;;chr15:61521417..61521460,-!p2@RORA!0.91!16.38!RORA;;chr6:34524093..34524135,-!p1@SPDEF!0.91!7.09!SPDEF;;chr7:15726296..15726315,-!p1@MEOX2!0.91!7.09!MEOX2;;chr17:1958388..1958404,+!p1@HIC1!0.90!46.45!HIC1;;chr7:113726226..113726245,+!p3@FOXP2!0.90!6.97!FOXP2;;chr1:200011711..200011752,+!p3@NR5A2!0.90!6.97!NR5A2;;chr19:6110474..6110551,-!p1@RFX2!0.89!42.78!RFX2;;chr17:1959369..1959388,+!p2@HIC1!0.89!18.34!HIC1;;chr1:61548069..61548102,+!p3@NFIA!0.89!16.87!NFIA;;chr18:53089538..53089578,-!p14@TCF4!0.89!6.85!TCF4;;chr5:158526756..158526797,-!p3@EBF1!0.89!6.85!EBF1;;chr8:93107451..93107468,-!p2@RUNX1T1!0.89!6.85!RUNX1T1;;chr12:80085120..80085156,-!p14@PAWR!0.89!6.72!PAWR;;chrX:66763914..66763933,+!p3@AR!0.89!6.72!AR;;chr15:96874927..96874938,+!p8@NR2F2!0.88!14.55!NR2F2;;chr19:22193731..22193751,-!p1@ZNF208!0.88!6.60!ZNF208;;chr11:100999848..100999858,-!p6@PGR!0.88!6.60!PGR;;chr7:27239703..27239715,-!p1@HOXA13!0.88!6.60!HOXA13;;chr15:37392724..37392757,-!p1@MEIS2!0.87!30.93!MEIS2;;chr5:88179017.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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000990;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000995;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003134;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003975;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004122 | |||
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006603,UBERON:0005795,UBERON:0010316 | |ffid_belonging_in_development=UBERON:0002532,UBERON:0006603,UBERON:0005795,UBERON:0010316 | ||
|fonse_cell_line= | |fonse_cell_line= | ||
Line 38: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/uterus%252c%2520adult%252c%2520pool1.CNhs11676.10100-102D1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/uterus%252c%2520adult%252c%2520pool1.CNhs11676.10100-102D1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/uterus%252c%2520adult%252c%2520pool1.CNhs11676.10100-102D1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/uterus%252c%2520adult%252c%2520pool1.CNhs11676.10100-102D1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/uterus%252c%2520adult%252c%2520pool1.CNhs11676.10100-102D1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10100-102D1 | |id=FF:10100-102D1 | ||
|is_a=EFO:0002091;;FF:0010100 | |is_a=EFO:0002091;;FF:0010100 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs11676 | |||
|library_id_phase_based=2:CNhs11676 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10100 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10100 | |||
|name=uterus, adult, pool1 | |name=uterus, adult, pool1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 46: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11676,LSID808,release008,COMPLETED | |profile_hcage=CNhs11676,LSID808,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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Line 85: | Line 101: | ||
|top_motifs=SRF:2.955438527;MZF1:2.39157342533;RBPJ:2.38931636381;HBP1_HMGB_SSRP1_UBTF:2.30927907767;TFAP2{A,C}:2.27743775746;SMAD1..7,9:2.1507778576;FOX{D1,D2}:2.13193642362;MAZ:2.1241596711;MYBL2:2.11118375703;NFATC1..3:1.95760268763;SPZ1:1.94373732757;RREB1:1.89374746139;GTF2I:1.88852371367;SP1:1.73645791888;PRDM1:1.69761283982;FOX{I1,J2}:1.67821342208;MED-1{core}:1.63678663089;GCM1,2:1.62796669329;NANOG:1.60872041399;TBP:1.51880755906;IKZF1:1.51634860758;PAX5:1.50420457663;XCPE1{core}:1.49633298759;PATZ1:1.47195144338;TLX1..3_NFIC{dimer}:1.43619752299;ZNF238:1.4306896145;MTE{core}:1.37252266713;EGR1..3:1.36058266174;MYFfamily:1.34637535634;TFAP2B:1.32714005201;MEF2{A,B,C,D}:1.28555825691;TFAP4:1.28126687623;EP300:1.22036309587;HIC1:1.19975230592;FOXO1,3,4:1.19026085769;BPTF:1.18953720095;STAT1,3:1.16928855339;XBP1:1.14556106995;TLX2:1.14421754673;ESR1:1.11989144003;TEAD1:1.06691128113;TFCP2:1.05402281665;NKX2-3_NKX2-5:1.01641658231;AR:0.973289119256;SOX2:0.93891768984;GATA4:0.934803599546;GFI1B:0.932923239541;BREu{core}:0.927292000752;CDC5L:0.87388257232;FOXP1:0.856684633898;TGIF1:0.84913791194;NHLH1,2:0.843650092847;ZNF384:0.824561877148;SOX5:0.804367531003;TBX4,5:0.793889552772;GTF2A1,2:0.776363394642;RFX2..5_RFXANK_RFXAP:0.774501478132;ZIC1..3:0.756672042759;HMX1:0.728639692251;ATF2:0.719443356527;MTF1:0.66527232597;NKX2-1,4:0.662168660679;ZFP161:0.661510893444;FOXN1:0.661291328496;IKZF2:0.641436106462;NR1H4:0.633127827001;KLF4:0.627975048481;IRF7:0.611434827679;POU1F1:0.60780434208;GZF1:0.55077986902;RXRA_VDR{dimer}:0.544754725354;ZNF148:0.538513428498;POU6F1:0.535168965332;ADNP_IRX_SIX_ZHX:0.53369782698;HOX{A6,A7,B6,B7}:0.533368397756;HSF1,2:0.519390448913;SREBF1,2:0.511903262364;FOX{F1,F2,J1}:0.497838362761;AHR_ARNT_ARNT2:0.494346919851;RFX1:0.435812495985;NFIX:0.431944131334;ETS1,2:0.426293995122;ZNF423:0.419346974599;FOXM1:0.403818714093;TEF:0.402767643413;NKX3-2:0.397596305667;GFI1:0.37161688438;PBX1:0.369133112734;GATA6:0.316231171512;EBF1:0.310648713735;HNF1A:0.307472964443;ATF6:0.295317346745;PAX6:0.287112363264;NR3C1:0.277119624586;HAND1,2:0.275937344433;CREB1:0.24251175932;SPIB:0.241761352083;ZNF143:0.241498460374;SOX{8,9,10}:0.223040696584;LEF1_TCF7_TCF7L1,2:0.220333359757;IRF1,2:0.210535995996;GLI1..3:0.20582051073;NRF1:0.191244154163;TAL1_TCF{3,4,12}:0.187762140236;JUN:0.177992245917;REST:0.169934945844;PRRX1,2:0.164870749079;PDX1:0.152407200397;ARID5B:0.148566048763;ALX1:0.14325891207;FOXL1:0.134490624064;PITX1..3:0.132366173013;PAX1,9:0.128240805812;MAFB:0.0753236691376;ZBTB6:0.0625821241172;LHX3,4:0.0620360541832;ESRRA:0.0607891780353;RXR{A,B,G}:0.0606249371792;SNAI1..3:0.0502994715908;SPI1:0.0477566965627;STAT2,4,6:0.023185400492;SOX17:0.00989813128566;ELF1,2,4:0.00112522459613;FOXP3:-0.00499365022211;POU5F1:-0.00715930448762;POU3F1..4:-0.0109864258488;DBP:-0.0290185340253;T:-0.0414983602046;CUX2:-0.0532173125763;RORA:-0.0603000524521;ATF4:-0.0605447321534;NR6A1:-0.0716446325714;FOXA2:-0.122087881004;HNF4A_NR2F1,2:-0.174125499978;LMO2:-0.194007877488;TP53:-0.198948025997;NR5A1,2:-0.208320079661;PAX3,7:-0.214242960417;MYOD1:-0.222459157234;ZEB1:-0.288095288529;HOX{A4,D4}:-0.302591504994;HOX{A5,B5}:-0.321766745021;NFKB1_REL_RELA:-0.36276309715;VSX1,2:-0.365226544182;FOXD3:-0.370629106073;HES1:-0.390771436528;RUNX1..3:-0.398974021486;FOSL2:-0.446617227472;TOPORS:-0.452627308312;FOS_FOS{B,L1}_JUN{B,D}:-0.463928671971;HLF:-0.469191518566;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.483294192831;CEBPA,B_DDIT3:-0.484790533517;FOXQ1:-0.485080549807;NFIL3:-0.49099027155;EN1,2:-0.508695112238;BACH2:-0.545255032486;NFE2:-0.553357525245;ALX4:-0.560139858232;ELK1,4_GABP{A,B1}:-0.561851176644;NFY{A,B,C}:-0.563148864906;NANOG{mouse}:-0.563750691926;CDX1,2,4:-0.573034103907;E2F1..5:-0.577778120346;UFEwm:-0.592777711603;CRX:-0.630029444527;NKX6-1,2:-0.656866269144;POU2F1..3:-0.669208664061;bHLH_family:-0.681954364202;ZBTB16:-0.731818864718;PAX2:-0.764754225748;ATF5_CREB3:-0.782028300646;NKX3-1:-0.784396125106;TFDP1:-0.788126298686;HIF1A:-0.815627296577;YY1:-0.834724691944;NFE2L2:-0.853010289797;NFE2L1:-0.873479194722;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.906988331081;HMGA1,2:-0.930544068188;DMAP1_NCOR{1,2}_SMARC:-0.979372551882;OCT4_SOX2{dimer}:-1.01303577457;ONECUT1,2:-1.05015621684;HOXA9_MEIS1:-1.1786910669;PAX8:-1.21714402988;AIRE:-1.22827880552;MYB:-1.32067407139;PPARG:-1.35760149635;PAX4:-1.41348004361;NKX2-2,8:-1.44665346848;EVI1:-1.50792949132;STAT5{A,B}:-2.30667199266 | |top_motifs=SRF:2.955438527;MZF1:2.39157342533;RBPJ:2.38931636381;HBP1_HMGB_SSRP1_UBTF:2.30927907767;TFAP2{A,C}:2.27743775746;SMAD1..7,9:2.1507778576;FOX{D1,D2}:2.13193642362;MAZ:2.1241596711;MYBL2:2.11118375703;NFATC1..3:1.95760268763;SPZ1:1.94373732757;RREB1:1.89374746139;GTF2I:1.88852371367;SP1:1.73645791888;PRDM1:1.69761283982;FOX{I1,J2}:1.67821342208;MED-1{core}:1.63678663089;GCM1,2:1.62796669329;NANOG:1.60872041399;TBP:1.51880755906;IKZF1:1.51634860758;PAX5:1.50420457663;XCPE1{core}:1.49633298759;PATZ1:1.47195144338;TLX1..3_NFIC{dimer}:1.43619752299;ZNF238:1.4306896145;MTE{core}:1.37252266713;EGR1..3:1.36058266174;MYFfamily:1.34637535634;TFAP2B:1.32714005201;MEF2{A,B,C,D}:1.28555825691;TFAP4:1.28126687623;EP300:1.22036309587;HIC1:1.19975230592;FOXO1,3,4:1.19026085769;BPTF:1.18953720095;STAT1,3:1.16928855339;XBP1:1.14556106995;TLX2:1.14421754673;ESR1:1.11989144003;TEAD1:1.06691128113;TFCP2:1.05402281665;NKX2-3_NKX2-5:1.01641658231;AR:0.973289119256;SOX2:0.93891768984;GATA4:0.934803599546;GFI1B:0.932923239541;BREu{core}:0.927292000752;CDC5L:0.87388257232;FOXP1:0.856684633898;TGIF1:0.84913791194;NHLH1,2:0.843650092847;ZNF384:0.824561877148;SOX5:0.804367531003;TBX4,5:0.793889552772;GTF2A1,2:0.776363394642;RFX2..5_RFXANK_RFXAP:0.774501478132;ZIC1..3:0.756672042759;HMX1:0.728639692251;ATF2:0.719443356527;MTF1:0.66527232597;NKX2-1,4:0.662168660679;ZFP161:0.661510893444;FOXN1:0.661291328496;IKZF2:0.641436106462;NR1H4:0.633127827001;KLF4:0.627975048481;IRF7:0.611434827679;POU1F1:0.60780434208;GZF1:0.55077986902;RXRA_VDR{dimer}:0.544754725354;ZNF148:0.538513428498;POU6F1:0.535168965332;ADNP_IRX_SIX_ZHX:0.53369782698;HOX{A6,A7,B6,B7}:0.533368397756;HSF1,2:0.519390448913;SREBF1,2:0.511903262364;FOX{F1,F2,J1}:0.497838362761;AHR_ARNT_ARNT2:0.494346919851;RFX1:0.435812495985;NFIX:0.431944131334;ETS1,2:0.426293995122;ZNF423:0.419346974599;FOXM1:0.403818714093;TEF:0.402767643413;NKX3-2:0.397596305667;GFI1:0.37161688438;PBX1:0.369133112734;GATA6:0.316231171512;EBF1:0.310648713735;HNF1A:0.307472964443;ATF6:0.295317346745;PAX6:0.287112363264;NR3C1:0.277119624586;HAND1,2:0.275937344433;CREB1:0.24251175932;SPIB:0.241761352083;ZNF143:0.241498460374;SOX{8,9,10}:0.223040696584;LEF1_TCF7_TCF7L1,2:0.220333359757;IRF1,2:0.210535995996;GLI1..3:0.20582051073;NRF1:0.191244154163;TAL1_TCF{3,4,12}:0.187762140236;JUN:0.177992245917;REST:0.169934945844;PRRX1,2:0.164870749079;PDX1:0.152407200397;ARID5B:0.148566048763;ALX1:0.14325891207;FOXL1:0.134490624064;PITX1..3:0.132366173013;PAX1,9:0.128240805812;MAFB:0.0753236691376;ZBTB6:0.0625821241172;LHX3,4:0.0620360541832;ESRRA:0.0607891780353;RXR{A,B,G}:0.0606249371792;SNAI1..3:0.0502994715908;SPI1:0.0477566965627;STAT2,4,6:0.023185400492;SOX17:0.00989813128566;ELF1,2,4:0.00112522459613;FOXP3:-0.00499365022211;POU5F1:-0.00715930448762;POU3F1..4:-0.0109864258488;DBP:-0.0290185340253;T:-0.0414983602046;CUX2:-0.0532173125763;RORA:-0.0603000524521;ATF4:-0.0605447321534;NR6A1:-0.0716446325714;FOXA2:-0.122087881004;HNF4A_NR2F1,2:-0.174125499978;LMO2:-0.194007877488;TP53:-0.198948025997;NR5A1,2:-0.208320079661;PAX3,7:-0.214242960417;MYOD1:-0.222459157234;ZEB1:-0.288095288529;HOX{A4,D4}:-0.302591504994;HOX{A5,B5}:-0.321766745021;NFKB1_REL_RELA:-0.36276309715;VSX1,2:-0.365226544182;FOXD3:-0.370629106073;HES1:-0.390771436528;RUNX1..3:-0.398974021486;FOSL2:-0.446617227472;TOPORS:-0.452627308312;FOS_FOS{B,L1}_JUN{B,D}:-0.463928671971;HLF:-0.469191518566;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.483294192831;CEBPA,B_DDIT3:-0.484790533517;FOXQ1:-0.485080549807;NFIL3:-0.49099027155;EN1,2:-0.508695112238;BACH2:-0.545255032486;NFE2:-0.553357525245;ALX4:-0.560139858232;ELK1,4_GABP{A,B1}:-0.561851176644;NFY{A,B,C}:-0.563148864906;NANOG{mouse}:-0.563750691926;CDX1,2,4:-0.573034103907;E2F1..5:-0.577778120346;UFEwm:-0.592777711603;CRX:-0.630029444527;NKX6-1,2:-0.656866269144;POU2F1..3:-0.669208664061;bHLH_family:-0.681954364202;ZBTB16:-0.731818864718;PAX2:-0.764754225748;ATF5_CREB3:-0.782028300646;NKX3-1:-0.784396125106;TFDP1:-0.788126298686;HIF1A:-0.815627296577;YY1:-0.834724691944;NFE2L2:-0.853010289797;NFE2L1:-0.873479194722;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.906988331081;HMGA1,2:-0.930544068188;DMAP1_NCOR{1,2}_SMARC:-0.979372551882;OCT4_SOX2{dimer}:-1.01303577457;ONECUT1,2:-1.05015621684;HOXA9_MEIS1:-1.1786910669;PAX8:-1.21714402988;AIRE:-1.22827880552;MYB:-1.32067407139;PPARG:-1.35760149635;PAX4:-1.41348004361;NKX2-2,8:-1.44665346848;EVI1:-1.50792949132;STAT5{A,B}:-2.30667199266 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10100-102D1;search_select_hide=table117:FF:10100-102D1 | |||
}} | }} |
Latest revision as of 12:21, 3 June 2020
Name: | uterus, adult, pool1 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs11676 |
Sample type: | tissues |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11676
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11676
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.0091 |
10 | 10 | 0.0369 |
100 | 100 | 0.101 |
101 | 101 | 0.743 |
102 | 102 | 0.252 |
103 | 103 | 0.0287 |
104 | 104 | 0.483 |
105 | 105 | 0.448 |
106 | 106 | 0.1 |
107 | 107 | 0.72 |
108 | 108 | 0.327 |
109 | 109 | 0.0149 |
11 | 11 | 0.0316 |
110 | 110 | 0.147 |
111 | 111 | 6.51673e-4 |
112 | 112 | 0.472 |
113 | 113 | 0.286 |
114 | 114 | 0.00648 |
115 | 115 | 0.472 |
116 | 116 | 0.399 |
117 | 117 | 0.0149 |
118 | 118 | 0.0764 |
119 | 119 | 0.167 |
12 | 12 | 0.873 |
120 | 120 | 0.0618 |
121 | 121 | 0.718 |
122 | 122 | 0.93 |
123 | 123 | 0.106 |
124 | 124 | 0.849 |
125 | 125 | 0.0894 |
126 | 126 | 0.683 |
127 | 127 | 0.0832 |
128 | 128 | 0.335 |
129 | 129 | 0.516 |
13 | 13 | 0.0784 |
130 | 130 | 0.501 |
131 | 131 | 0.262 |
132 | 132 | 0.221 |
133 | 133 | 0.0275 |
134 | 134 | 0.256 |
135 | 135 | 0.32 |
136 | 136 | 0.376 |
137 | 137 | 0.208 |
138 | 138 | 0.452 |
139 | 139 | 0.211 |
14 | 14 | 0.982 |
140 | 140 | 0.192 |
141 | 141 | 0.596 |
142 | 142 | 0.453 |
143 | 143 | 0.0155 |
144 | 144 | 0.918 |
145 | 145 | 0.397 |
146 | 146 | 0.884 |
147 | 147 | 0.919 |
148 | 148 | 0.00669 |
149 | 149 | 0.635 |
15 | 15 | 0.0434 |
150 | 150 | 0.203 |
151 | 151 | 0.38 |
152 | 152 | 0.324 |
153 | 153 | 0.402 |
154 | 154 | 0.741 |
155 | 155 | 0.159 |
156 | 156 | 0.69 |
157 | 157 | 0.584 |
158 | 158 | 0.785 |
159 | 159 | 0.295 |
16 | 16 | 0.0584 |
160 | 160 | 0.361 |
161 | 161 | 0.398 |
162 | 162 | 0.348 |
163 | 163 | 0.368 |
164 | 164 | 0.0894 |
165 | 165 | 0.704 |
166 | 166 | 0.15 |
167 | 167 | 0.0113 |
168 | 168 | 0.605 |
169 | 169 | 0.0449 |
17 | 17 | 0.245 |
18 | 18 | 0.0258 |
19 | 19 | 0.941 |
2 | 2 | 0.408 |
20 | 20 | 0.245 |
21 | 21 | 0.206 |
22 | 22 | 0.65 |
23 | 23 | 0.976 |
24 | 24 | 0.431 |
25 | 25 | 0.316 |
26 | 26 | 0.00177 |
27 | 27 | 0.708 |
28 | 28 | 0.703 |
29 | 29 | 0.0161 |
3 | 3 | 0.149 |
30 | 30 | 0.116 |
31 | 31 | 0.649 |
32 | 32 | 0.38 |
33 | 33 | 0.138 |
34 | 34 | 0.466 |
35 | 35 | 0.206 |
36 | 36 | 0.00788 |
37 | 37 | 0.083 |
38 | 38 | 0.527 |
39 | 39 | 0.546 |
4 | 4 | 0.521 |
40 | 40 | 0.0318 |
41 | 41 | 0.107 |
42 | 42 | 0.361 |
43 | 43 | 0.135 |
44 | 44 | 0.125 |
45 | 45 | 0.543 |
46 | 46 | 0.0527 |
47 | 47 | 0.0381 |
48 | 48 | 0.133 |
49 | 49 | 0.0702 |
5 | 5 | 0.494 |
50 | 50 | 0.887 |
51 | 51 | 0.522 |
52 | 52 | 0.768 |
53 | 53 | 0.945 |
54 | 54 | 0.751 |
55 | 55 | 0.672 |
56 | 56 | 0.602 |
57 | 57 | 0.154 |
58 | 58 | 0.523 |
59 | 59 | 0.453 |
6 | 6 | 0.742 |
60 | 60 | 0.553 |
61 | 61 | 0.371 |
62 | 62 | 0.269 |
63 | 63 | 0.209 |
64 | 64 | 0.166 |
65 | 65 | 0.457 |
66 | 66 | 0.13 |
67 | 67 | 0.326 |
68 | 68 | 0.963 |
69 | 69 | 0.125 |
7 | 7 | 0.222 |
70 | 70 | 0.0152 |
71 | 71 | 0.0236 |
72 | 72 | 0.371 |
73 | 73 | 0.0564 |
74 | 74 | 0.531 |
75 | 75 | 0.00817 |
76 | 76 | 0.0991 |
77 | 77 | 0.976 |
78 | 78 | 0.075 |
79 | 79 | 0.346 |
8 | 8 | 0.0567 |
80 | 80 | 0.321 |
81 | 81 | 0.175 |
82 | 82 | 0.604 |
83 | 83 | 0.918 |
84 | 84 | 0.631 |
85 | 85 | 0.287 |
86 | 86 | 0.442 |
87 | 87 | 0.00504 |
88 | 88 | 0.961 |
89 | 89 | 0.394 |
9 | 9 | 0.789 |
90 | 90 | 0.0538 |
91 | 91 | 0.872 |
92 | 92 | 0.723 |
93 | 93 | 0.238 |
94 | 94 | 0.0106 |
95 | 95 | 0.00404 |
96 | 96 | 0.281 |
97 | 97 | 0.665 |
98 | 98 | 0.181 |
99 | 99 | 0.814 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11676
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010100 human uterus - adult sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000995 (uterus)
0006834 (uterus or analog)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0003975 (internal female genitalia)
0004175 (internal genitalia)
0010317 (germ layer / neural crest derived structure)
0003100 (female organism)
0000474 (female reproductive system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010100 (human uterus - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0005795 (embryonic uterus)
UBERON:0010316 (germ layer / neural crest)