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{{f5samples
{{f5samples
|DRA_sample_Accession=CAGE@SAMD00005131
|accession_numbers=CAGE;DRX007881;DRR008753;DRZ000178;DRZ001563;DRZ011528;DRZ012913
|ancestors_in_anatomy_facet=
|ancestors_in_anatomy_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:3350,DOID:6193
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:3350,DOID:6193
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr8:67525443..67525459,-!p2@MYBL1!1.75!81.35!MYBL1;;chr7:19157248..19157268,-!p1@TWIST1!1.74!145.16!TWIST1;;chr10:28034739..28034756,-!p1@MKX!1.64!42.48!MKX;;chr4:81118647..81118666,+!p1@PRDM8!1.54!44.03!PRDM8;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.53!33.02!HOXC5;;chr2:102091144..102091183,-!p2@RFX8!1.45!27.00!RFX8;;chr11:31832658..31832681,-!p1@PAX6!1.42!25.28!PAX6;;chr19:9609272..9609297,-!p1@ZNF560!1.40!23.91!ZNF560;;chr20:62680984..62680999,-!p1@SOX18!1.39!31.30!SOX18;;chr12:54393880..54393962,+!p1@HOXC9!1.37!22.70!HOXC9;;chr14:61116183..61116208,-!p1@SIX1!1.35!78.77!SIX1;;chr19:56879534..56879615,+!p3@ZNF542!1.34!32.16!ZNF542;;chr19:38183138..38183157,-!p2@ZNF781!1.33!20.47!ZNF781;;chr14:64761083..64761101,-!p1@ESR2!1.33!20.47!ESR2;;chr2:239148671..239148686,-!p1@HES6!1.32!70.86!HES6;;chr8:67525473..67525518,-!p1@MYBL1!1.31!44.03!MYBL1;;chr19:48773337..48773339,+!p2@ZNF114!1.30!19.09!ZNF114;;chr3:181429704..181429722,+!p1@SOX2!1.28!17.89!SOX2;;chr1:44513995..44514031,+!p1@KLF17!1.25!16.85!KLF17;;chr15:96874145..96874166,+!p7@NR2F2!1.24!30.96!NR2F2;;chr17:46703687..46703740,-!p1@HOXB9!1.21!15.13!HOXB9;;chr20:50179368..50179392,-!p2@NFATC2!1.20!19.26!NFATC2;;chr6:85473156..85473210,-!p2@TBX18!1.19!17.54!TBX18;;chr3:181429741..181429767,+!p2@SOX2!1.19!14.45!SOX2;;chr19:22193731..22193751,-!p1@ZNF208!1.16!13.41!ZNF208;;chr7:63505799..63505904,+!p1@ZNF727!1.15!13.07!ZNF727;;chrY:21906594..21906622,-!p1@KDM5D!1.15!13.07!KDM5D;;chrY:2803415..2803468,+!p1@ZFY!1.14!12.90!ZFY;;chr7:27205106..27205134,-!p2@HOXA9!1.14!12.73!HOXA9;;chr19:56879625..56879636,+!p5@ZNF542!1.14!12.73!ZNF542;;chr19:56879653..56879743,+!p1@ZNF542!1.13!92.70!ZNF542;;chr17:46688334..46688385,-!p1@HOXB7!1.13!17.89!HOXB7;;chr17:46622205..46622218,-!p3@HOXB2!1.13!14.62!HOXB2;;chr7:27205136..27205164,-!p1@HOXA9!1.13!12.38!HOXA9;;chr12:27485762..27485776,+!p3@ARNTL2!1.11!31.99!ARNTL2;;chr15:96874216..96874236,+!p13@NR2F2!1.08!17.03!NR2F2;;chr17:6926362..6926377,+!p1@BCL6B!1.08!11.01!BCL6B;;chr3:147111198..147111225,+!p4@ZIC1!1.08!11.01!ZIC1;;chr15:100106670..100106697,+!p4@MEF2A!1.07!17.71!MEF2A;;chr17:46690839..46690884,-!p1@HOXB8!1.07!10.66!HOXB8;;chr19:22398550..22398579,-!p@chr19:22398550..22398579,-!1.07!10.66!ZNF676;;chr11:31832610..31832639,-!p5@PAX6!1.05!10.15!PAX6;;chr15:96874244..96874259,+!p5@NR2F2!1.04!24.25!NR2F2;;chr17:46682321..46682362,-!p1@HOXB6!1.04!9.98!HOXB6;;chr2:176994408..176994492,+!p1@HOXD8!1.04!9.98!HOXD8;;chr17:40477163..40477183,-!p7@STAT3!1.03!9.63!STAT3;;chr7:27192185..27192209,-!p1@HOXA3!1.03!9.63!HOXA3;;chr7:19157043..19157088,-!p2@TWIST1!1.02!24.42!TWIST1;;chr12:66218598..66218645,+!p2@HMGA2!1.00!42.31!HMGA2;;chr7:27196267..27196311,-!p1@HOXA7!1.00!9.12!HOXA7;;chr7:27224842..27224872,-!p1@HOXA11!1.00!8.94!HOXA11;;chr17:40477088..40477101,-!p24@STAT3!1.00!8.94!STAT3;;chr17:46622229..46622257,-!p6@HOXB2!0.99!10.32!HOXB2;;chr15:96876966..96877017,+!p12@NR2F2!0.98!12.55!NR2F2;;chr19:38183208..38183225,-!p1@ZNF781!0.98!11.01!ZNF781;;chr3:147111231..147111281,+!p3@ZIC1!0.98!8.60!ZIC1;;chr7:5111723..5111807,+!p2@RBAK!0.98!8.60!RBAK;;chr8:123793708..123793723,+!p6@ZHX2!0.97!8.43!ZHX2;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.97!8.43!HOXC5;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.96!8.60!GLIS1;;chr19:56879817..56879825,+!p4@ZNF542!0.96!8.08!ZNF542;;chr2:102091566..102091581,-!p1@RFX8!0.96!8.08!RFX8;;chr2:175199697..175199706,+!p2@SP9!0.96!8.08!SP9;;chr15:96874012..96874042,+!p2@NR2F2!0.95!73.61!NR2F2;;chr5:134369905..134369972,-!p1@PITX1!0.95!12.38!PITX1;;chr2:46524897..46524911,+!p2@EPAS1!0.94!22.36!EPAS1;;chr12:66218255..66218304,+!p3@HMGA2!0.94!21.15!HMGA2;;chr8:67525524..67525543,-!p3@MYBL1!0.94!13.07!MYBL1;;chr17:46622114..46622138,-!p4@HOXB2!0.93!11.70!HOXB2;;chr2:200322654..200322707,-!p2@SATB2!0.92!10.84!SATB2;;chr7:27224795..27224840,-!p2@HOXA11!0.92!7.22!HOXA11;;chr17:46622070..46622109,-!p1@HOXB2!0.90!16.17!HOXB2;;chr20:39946361..39946379,-!p2@ZHX3!0.89!20.98!ZHX3;;chr11:31832687..31832704,-!p6@PAX6!0.89!6.71!PAX6;;chr16:73093174..73093209,-!p3@ZFHX3!0.88!9.12!ZFHX3;;chr18:53068911..53068935,-!p4@TCF4!0.88!7.57!TCF4;;chr17:46692318..46692362,-!p5@HOXB8!0.88!6.54!HOXB8;;chr14:64761275..64761283,-!p14@ESR2!0.88!6.54!ESR2;;chr2:239756671..239756732,+!p1@TWIST2!0.87!21.67!TWIST2;;chr3:32023232..32023273,+!p1@ZNF860!0.87!9.46!ZNF860;;chr19:22469236..22469266,+!p1@ZNF729!0.87!6.36!ZNF729;;chr19:38183166..38183184,-!p3@ZNF781!0.87!6.36!ZNF781;;chr19:22605136..22605154,-!p1@ZNF98!0.86!6.19!ZNF98;;chr19:2867325..2867348,+!p1@ZNF556!0.86!6.19!ZNF556;;chr7:27196217..27196246,-!p2@HOXA7!0.86!6.19!HOXA7;;chr7:149470540..149470596,-!p2@ZNF467!0.85!8.26!ZNF467;;chr5:137804405..137804444,+!p3@EGR1!0.85!7.40!EGR1;;chr19:9420326..9420349,-!p@chr19:9420326..9420349,-!0.85!6.02!ZNF699;;chr5:88178983..88179012,-!p1@MEF2C!0.84!48.84!MEF2C;;chr5:137804484..137804498,+!p2@EGR1!0.84!24.94!EGR1;;chr1:59249645..59249656,-!p4@JUN!0.84!15.48!JUN;;chr17:46675420.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F1;;chr5:121465268..121465281,+!p2@ZNF474!0.23!0.69!ZNF474;;chr5:134369973..134369984,-!p3@PITX1!0.23!0.69!PITX1;;chr6:1612300..1612324,+!p3@FOXC1!0.23!0.69!FOXC1;;chr6:50789717..50789729,+!p4@TFAP2B!0.23!0.69!TFAP2B;;chr7:27205089..27205096,-!p4@HOXA9!0.23!0.69!HOXA9;;chr8:116681878..116681893,-!p15@TRPS1!0.23!0.69!TRPS1;;chr15:83953373..83953386,-!p2@BNC1!0.23!0.69!BNC1;;chr17:42287802..42287806,-!p25@UBTF!0.23!0.69!UBTF;;chr17:7197881..7197901,-!p3@YBX2!0.23!0.69!YBX2;;chr17:8027418..8027432,-!p1@HES7!0.23!0.69!HES7;;chr18:56532079..56532095,+!p8@ZNF532!0.23!0.69!ZNF532;;chr19:31840278..31840300,-!p5@TSHZ3!0.23!0.69!TSHZ3;;chr19:38270528..38270545,-!p2@ZNF573!0.23!0.69!ZNF573;;chr19:38720356..38720369,-!p4@DPF1!0.23!0.69!DPF1;;chr19:58790361..58790372,+!p2@ZNF8!0.23!0.69!ZNF8;;chr1:8935472..8935488,-!p20@ENO1!0.23!0.69!ENO1;;chr21:39870339..39870443,-!p1@ERG!0.23!0.69!ERG;;chr10:131762589..131762601,-!p3@EBF3!0.23!0.69!EBF3;;chr11:128392258..128392264,-!p7@ETS1!0.23!0.69!ETS1;;chr11:31832207..31832226,-!p12@PAX6!0.23!0.69!PAX6;;chr12:54384370..54384382,+!p5@HOXC6!0.23!0.69!HOXC6;;chr12:54447637..54447659,+!p4@HOXC4!0.23!0.69!HOXC4;;chr12:57917037..57917052,+!p9@MBD6!0.23!0.69!MBD6;;chr12:66218469..66218477,+!p16@HMGA2!0.23!0.69!HMGA2;;chr12:66218923..66218934,+!p14@HMGA2!0.23!0.69!HMGA2;;chr13:100634111..100634118,+!p8@ZIC2!0.23!0.69!ZIC2;;chr14:35874077..35874091,-!p8@NFKBIA!0.23!0.69!NFKBIA;;chr2:113994491..113994515,-!p7@PAX8!0.23!0.69!PAX8;;chr2:113999360..113999386,-!p4@PAX8!0.23!0.69!PAX8;;chr2:172967353..172967365,-!p5@DLX2!0.23!0.69!DLX2;;chr2:176987415..176987425,+!p4@HOXD9!0.23!0.69!HOXD9;;chr2:176994919..176994931,+!p2@HOXD8!0.23!0.69!HOXD8;;chr2:177001237..177001252,+!p5@HOXD3!0.23!0.69!HOXD3;;chr2:177001366..177001379,+!p4@HOXD3!0.23!0.69!HOXD3;;chr2:180610775..180610790,-!p15@ZNF385B!0.23!0.69!ZNF385B;;chr2:200213794..200213807,-!p9@SATB2!0.23!0.69!SATB2;;chr3:147111505..147111529,+!p6@ZIC1!0.23!0.69!ZIC1;;chr3:71180051..71180085,-!p21@FOXP1!0.23!0.69!FOXP1;;chr3:71631248..71631268,-!p26@FOXP1!0.23!0.69!FOXP1;;chr4:206376..206387,+!p2@ZNF876P!0.23!0.69!ZNF876P;;chr9:14083091..14083096,-!p12@NFIB!0.23!0.69!NFIB;;chr9:86594363..86594374,-!p@chr9:86594363..86594374,-!0.23!0.69!HNRPK;;chrX:47863414..47863425,-!p3@ZNF182!0.23!0.69!ZNF182;;chr9:16728161..16728185,-!p4@BNC2!0.23!0.69!BNC2;;chr9:14314066..14314075,-!p11@NFIB!0.23!0.69!NFIB;;chr9:99180739..99180752,-!p4@ZNF367!0.23!0.69!ZNF367;;chr2:191878874..191878938,-!p1@STAT1!0.22!80.49!STAT1;;chr21:43430440..43430485,-!p1@ZNF295!0.22!20.47!ZNF295;;chr8:146052918..146052975,+!p1@ZNF7!0.22!15.99!ZNF7;;chr11:615942..615957,-!p1@IRF7!0.22!13.59!IRF7;;chr17:40897043..40897087,-!p1@EZH1!0.22!12.73!EZH1;;chr19:53141584..53141625,-!p2@ZNF83!0.22!11.35!ZNF83;;chr9:139294614..139294633,-!p@chr9:139294614..139294633,-!0.22!8.77!SNAPC4;;chr19:12175535..12175554,+!p1@ZNF844!0.22!7.57!ZNF844;;chr3:75834687..75834720,-!p1@ZNF717!0.22!6.88!ZNF717;;chr16:3285144..3285191,-!p1@ZNF200!0.22!6.71!ZNF200;;chr5:88179017..88179046,-!p2@MEF2C!0.22!5.33!MEF2C;;chr2:242576641..242576731,-!p2@THAP4!0.22!4.99!THAP4;;chr19:44331493..44331552,+!p1@ZNF283!0.22!4.64!ZNF283;;chr7:99156145..99156207,+!p5@ZNF655!0.22!4.30!ZNF655;;chr3:71179746..71179783,-!p7@FOXP1!0.22!4.30!FOXP1;;chr6:12008986..12009016,+!p3@HIVEP1!0.22!3.96!HIVEP1;;chr16:89787402..89787430,+!p2@ZNF276!0.22!3.96!ZNF276;;chr18:45457478..45457517,-!p6@SMAD2!0.22!3.61!SMAD2;;chr19:12035878..12035902,+!p2@ZNF700,p2@ZNF763!0.22!2.75!ZNF700;;chr19:52408285..52408310,-!p3@ZNF649!0.22!2.75!ZNF649;;chr2:113033141..113033162,+!p2@ZC3H6!0.22!2.41!ZC3H6;;chr11:8102749..8102769,+!p2@TUB!0.22!2.06!TUB;;chr1:249153114..249153175,-!p3@ZNF692!0.22!2.06!ZNF692;;chr19:20011775..20011800,+!p2@ZNF93!0.22!1.89!ZNF93;;chr8:28243813..28243839,-!p4@ZNF395!0.22!1.89!ZNF395;;
Line 35: Line 40:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/epithelioid%2520sarcoma%2520cell%2520line%253aHS-ES-1.CNhs11247.10443-106F2.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/epithelioid%2520sarcoma%2520cell%2520line%253aHS-ES-1.CNhs11247.10443-106F2.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/epithelioid%2520sarcoma%2520cell%2520line%253aHS-ES-1.CNhs11247.10443-106F2.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/epithelioid%2520sarcoma%2520cell%2520line%253aHS-ES-1.CNhs11247.10443-106F2.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/epithelioid%2520sarcoma%2520cell%2520line%253aHS-ES-1.CNhs11247.10443-106F2.hg38.nobarcode.ctss.bed.gz
|id=FF:10443-106F2
|id=FF:10443-106F2
|is_a=DOID:6193;;EFO:0002091;;FF:0000003;;FF:0000210
|is_a=DOID:6193;;EFO:0002091;;FF:0000003;;FF:0000210
|is_obsolete=
|library_id=CNhs11247
|library_id_phase_based=2:CNhs11247
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10443
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10443
|name=epithelioid sarcoma cell line:HS-ES-1
|name=epithelioid sarcoma cell line:HS-ES-1
|namespace=FANTOM5
|namespace=FANTOM5
Line 42: Line 59:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs11247,LSID757,release008,COMPLETED
|profile_hcage=CNhs11247,LSID757,release008,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.0203691670453926,0,-0.27483329820609,-0.247942342644033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0740350572471498,0,0.254992071600053,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,1.30669164833194,0,0.00410127544868754,0,0.0689224358658181,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.343192323807067,0,0,0.0689224358658181,-0.0969923612426051,0,0,-0.0284211913472788,0,0,0,0,0,0,0,0,0.0689224358658181,0,0,0,0,0.0689224358658181,0,0,0,0,0.0344612179329091,0,0,0,0,0,0,0,0,0,-0.0584468268118252,0.290307065868813,0.0344612179329091,0,0.0344612179329091,0,0.308142645607987,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0.0689224358658181,0,0,-0.0476964575857156,-0.0881493139725753,0.12839024180777,0,0,0,0,0
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|rna_box=106
|rna_box=106
|rna_catalog_number=
|rna_catalog_number=
Line 57: Line 77:
|rna_weight_ug=37.325
|rna_weight_ug=37.325
|sample_age=
|sample_age=
|sample_category=cell lines
|sample_cell_catalog=RCB2364
|sample_cell_catalog=RCB2364
|sample_cell_line=HS-ES-1
|sample_cell_line=HS-ES-1
Line 69: Line 90:
|sample_ethnicity=
|sample_ethnicity=
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.0861854172402e-259!GO:0043231;intracellular membrane-bound organelle;6.96934004965097e-217!GO:0043227;membrane-bound organelle;1.23608227091157e-216!GO:0043226;organelle;4.03095706796822e-215!GO:0043229;intracellular organelle;1.08916779513215e-214!GO:0005737;cytoplasm;2.00904960436787e-170!GO:0044422;organelle part;1.21559152158492e-140!GO:0044446;intracellular organelle part;1.92584744691985e-139!GO:0044444;cytoplasmic part;1.5666050692811e-121!GO:0005634;nucleus;2.25942792631449e-105!GO:0032991;macromolecular complex;4.88002118563716e-98!GO:0043170;macromolecule metabolic process;4.02299285643717e-96!GO:0044238;primary metabolic process;1.54538734461792e-95!GO:0044237;cellular metabolic process;9.11302661467704e-93!GO:0030529;ribonucleoprotein complex;1.42076827096359e-81!GO:0044428;nuclear part;3.32304063518376e-75!GO:0005515;protein binding;1.62684264252047e-74!GO:0003723;RNA binding;7.37775594939926e-74!GO:0043233;organelle lumen;6.96598982114167e-71!GO:0031974;membrane-enclosed lumen;6.96598982114167e-71!GO:0043283;biopolymer metabolic process;2.65654485819752e-62!GO:0005739;mitochondrion;1.17308331805548e-58!GO:0010467;gene expression;1.25148553346864e-57!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.50404570841383e-57!GO:0016043;cellular component organization and biogenesis;9.12690176084902e-52!GO:0043234;protein complex;1.54899941413977e-50!GO:0006412;translation;2.60150813861365e-49!GO:0005840;ribosome;8.30036663972271e-49!GO:0006396;RNA processing;1.24532755167863e-45!GO:0019538;protein metabolic process;1.97485220564696e-45!GO:0031981;nuclear lumen;2.95521974638908e-45!GO:0031090;organelle membrane;3.12316848616747e-45!GO:0003735;structural constituent of ribosome;1.66009835526839e-42!GO:0015031;protein transport;2.03074775004743e-42!GO:0033036;macromolecule localization;2.90624788032248e-42!GO:0003676;nucleic acid binding;1.01409864960828e-40!GO:0044260;cellular macromolecule metabolic process;4.58059842096901e-40!GO:0044267;cellular protein metabolic process;6.43448758312363e-40!GO:0045184;establishment of protein localization;5.04896953946322e-39!GO:0044429;mitochondrial part;5.41891303889104e-39!GO:0008104;protein localization;1.424295164143e-38!GO:0005829;cytosol;6.42360339068857e-38!GO:0016071;mRNA metabolic process;8.91102292980211e-38!GO:0031967;organelle envelope;1.57232849401014e-37!GO:0033279;ribosomal subunit;2.55583108357153e-37!GO:0009059;macromolecule biosynthetic process;2.74335086054457e-37!GO:0031975;envelope;3.53585128014641e-37!GO:0043228;non-membrane-bound organelle;1.58145766563943e-35!GO:0043232;intracellular non-membrane-bound organelle;1.58145766563943e-35!GO:0046907;intracellular transport;2.53860977382161e-35!GO:0008380;RNA splicing;6.91111480173767e-35!GO:0006259;DNA metabolic process;7.92592497051169e-35!GO:0044249;cellular biosynthetic process;1.38964648220959e-33!GO:0009058;biosynthetic process;1.45453242471671e-33!GO:0006996;organelle organization and biogenesis;8.58946153381972e-33!GO:0065003;macromolecular complex assembly;2.39944546395387e-32!GO:0006397;mRNA processing;2.48507715896673e-32!GO:0016070;RNA metabolic process;8.57431111070185e-31!GO:0006886;intracellular protein transport;1.04060486253477e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.77048381645637e-29!GO:0022607;cellular component assembly;6.90866144998243e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.31969340648825e-27!GO:0005654;nucleoplasm;8.17670057171236e-27!GO:0005740;mitochondrial envelope;1.45295885514272e-25!GO:0007049;cell cycle;1.68893610530386e-25!GO:0005681;spliceosome;1.15528391848665e-24!GO:0019866;organelle inner membrane;2.23698447245079e-24!GO:0031966;mitochondrial membrane;2.98437186208047e-24!GO:0051649;establishment of cellular localization;3.20789499499472e-24!GO:0051641;cellular localization;5.20153018107508e-24!GO:0000166;nucleotide binding;2.82555809725513e-23!GO:0044445;cytosolic part;1.86537552666017e-22!GO:0006974;response to DNA damage stimulus;2.60481583705321e-22!GO:0005743;mitochondrial inner membrane;3.39550948028782e-22!GO:0006119;oxidative phosphorylation;9.30054390251654e-22!GO:0006457;protein folding;1.18150927078847e-21!GO:0044451;nucleoplasm part;2.26612350063601e-21!GO:0017111;nucleoside-triphosphatase activity;6.43711898863302e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.60513749959968e-20!GO:0016462;pyrophosphatase activity;1.79967812681663e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;2.21570445269468e-20!GO:0015935;small ribosomal subunit;6.90827287779577e-20!GO:0005730;nucleolus;1.22459172135259e-19!GO:0022402;cell cycle process;1.67189378435611e-19!GO:0022618;protein-RNA complex assembly;3.46800523991408e-19!GO:0008134;transcription factor binding;4.84831297961597e-19!GO:0043285;biopolymer catabolic process;9.93910615903696e-19!GO:0000278;mitotic cell cycle;1.08273257450409e-18!GO:0044455;mitochondrial membrane part;1.24299880194407e-18!GO:0006512;ubiquitin cycle;1.44726443526792e-18!GO:0044265;cellular macromolecule catabolic process;1.81711579371857e-18!GO:0015934;large ribosomal subunit;1.97992092942717e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;3.01873602180084e-18!GO:0019941;modification-dependent protein catabolic process;5.61533390210778e-18!GO:0043632;modification-dependent macromolecule catabolic process;5.61533390210778e-18!GO:0005694;chromosome;5.87096507038656e-18!GO:0044257;cellular protein catabolic process;6.07798527287209e-18!GO:0016874;ligase activity;6.23663077479795e-18!GO:0012505;endomembrane system;8.89185041537322e-18!GO:0006281;DNA repair;1.00945333297267e-17!GO:0006511;ubiquitin-dependent protein catabolic process;1.17249229911756e-17!GO:0044427;chromosomal part;4.11310222788855e-17!GO:0032553;ribonucleotide binding;1.25577567472889e-16!GO:0032555;purine ribonucleotide binding;1.25577567472889e-16!GO:0005746;mitochondrial respiratory chain;1.65792201949161e-16!GO:0048770;pigment granule;1.65792201949161e-16!GO:0042470;melanosome;1.65792201949161e-16!GO:0051082;unfolded protein binding;2.13162220645228e-16!GO:0000502;proteasome complex (sensu Eukaryota);2.39667665273056e-16!GO:0017076;purine nucleotide binding;2.53167544246618e-16!GO:0009057;macromolecule catabolic process;3.52718942860064e-16!GO:0030163;protein catabolic process;9.62456843657004e-16!GO:0031980;mitochondrial lumen;1.17038964967831e-15!GO:0005759;mitochondrial matrix;1.17038964967831e-15!GO:0050794;regulation of cellular process;1.26503386472227e-15!GO:0008135;translation factor activity, nucleic acid binding;1.50654656662879e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.54978995465921e-15!GO:0051276;chromosome organization and biogenesis;1.58568265771557e-15!GO:0006605;protein targeting;2.15289396965229e-15!GO:0005524;ATP binding;2.23626646592819e-15!GO:0000087;M phase of mitotic cell cycle;3.06921733834228e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.11654803121312e-15!GO:0005783;endoplasmic reticulum;5.68376487345595e-15!GO:0007067;mitosis;6.09555906729867e-15!GO:0009719;response to endogenous stimulus;8.61821175757414e-15!GO:0032559;adenyl ribonucleotide binding;1.05712008286688e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.81563589775829e-14!GO:0003954;NADH dehydrogenase activity;1.81563589775829e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.81563589775829e-14!GO:0051301;cell division;2.87125491655196e-14!GO:0030554;adenyl nucleotide binding;3.35150341804991e-14!GO:0022403;cell cycle phase;3.99464297794848e-14!GO:0005794;Golgi apparatus;4.5451239075296e-14!GO:0044248;cellular catabolic process;7.04376182074736e-14!GO:0006260;DNA replication;9.44579598231136e-14!GO:0016887;ATPase activity;1.61252402006388e-13!GO:0005761;mitochondrial ribosome;3.57171714659337e-13!GO:0000313;organellar ribosome;3.57171714659337e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;3.89484285544687e-13!GO:0000375;RNA splicing, via transesterification reactions;3.89484285544687e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.89484285544687e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.82991173812515e-13!GO:0016192;vesicle-mediated transport;7.23215576124728e-13!GO:0003712;transcription cofactor activity;8.38060467492708e-13!GO:0048193;Golgi vesicle transport;8.46689234568624e-13!GO:0000279;M phase;8.50977894147275e-13!GO:0042775;organelle ATP synthesis coupled electron transport;9.38227939709039e-13!GO:0042773;ATP synthesis coupled electron transport;9.38227939709039e-13!GO:0031965;nuclear membrane;1.10470042860311e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.29290038875631e-12!GO:0045271;respiratory chain complex I;1.29290038875631e-12!GO:0005747;mitochondrial respiratory chain complex I;1.29290038875631e-12!GO:0019222;regulation of metabolic process;1.41199501049072e-12!GO:0042623;ATPase activity, coupled;1.64553694767709e-12!GO:0006413;translational initiation;1.65098387168326e-12!GO:0044432;endoplasmic reticulum part;1.7299298555062e-12!GO:0005635;nuclear envelope;1.84876187927977e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.07311079683582e-12!GO:0043412;biopolymer modification;2.64907287739155e-12!GO:0006325;establishment and/or maintenance of chromatin architecture;2.80218926135361e-12!GO:0003743;translation initiation factor activity;3.0615829362642e-12!GO:0008639;small protein conjugating enzyme activity;3.36941699239598e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.3798475732698e-12!GO:0006915;apoptosis;3.68766130160421e-12!GO:0012501;programmed cell death;3.69803519803345e-12!GO:0044453;nuclear membrane part;3.82376688426103e-12!GO:0006366;transcription from RNA polymerase II promoter;4.23508165430627e-12!GO:0004842;ubiquitin-protein ligase activity;7.19082848087017e-12!GO:0006323;DNA packaging;1.01560687650735e-11!GO:0006913;nucleocytoplasmic transport;1.04192145949702e-11!GO:0051186;cofactor metabolic process;1.42039846901264e-11!GO:0019787;small conjugating protein ligase activity;1.50202555597318e-11!GO:0051169;nuclear transport;1.63145147506618e-11!GO:0004386;helicase activity;2.64722880102241e-11!GO:0008219;cell death;3.26274607410972e-11!GO:0016265;death;3.26274607410972e-11!GO:0042254;ribosome biogenesis and assembly;3.47460203505299e-11!GO:0050789;regulation of biological process;4.57420736280283e-11!GO:0006446;regulation of translational initiation;5.22124676523147e-11!GO:0000074;regulation of progression through cell cycle;5.94275605615561e-11!GO:0051726;regulation of cell cycle;7.65858818873147e-11!GO:0016604;nuclear body;1.02598879614132e-10!GO:0006464;protein modification process;1.2037760504797e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.21969623844613e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.27722302034616e-10!GO:0048523;negative regulation of cellular process;5.73381901695396e-10!GO:0031323;regulation of cellular metabolic process;7.91607411466046e-10!GO:0016881;acid-amino acid ligase activity;9.72915756743226e-10!GO:0005643;nuclear pore;1.49252953406365e-09!GO:0005768;endosome;1.76061221289565e-09!GO:0005793;ER-Golgi intermediate compartment;1.97049983462164e-09!GO:0017038;protein import;2.65976574999879e-09!GO:0000785;chromatin;3.02617158104581e-09!GO:0008026;ATP-dependent helicase activity;3.03837084193431e-09!GO:0043687;post-translational protein modification;6.75914132833446e-09!GO:0042981;regulation of apoptosis;6.75914132833446e-09!GO:0006399;tRNA metabolic process;7.08851418993549e-09!GO:0065004;protein-DNA complex assembly;7.16114874374457e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.80824654240357e-09!GO:0016607;nuclear speck;7.96227291739925e-09!GO:0006350;transcription;8.7113926947191e-09!GO:0065002;intracellular protein transport across a membrane;8.7529339740215e-09!GO:0006461;protein complex assembly;8.78626851779805e-09!GO:0043067;regulation of programmed cell death;8.97853961005268e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;9.20294596625067e-09!GO:0009259;ribonucleotide metabolic process;9.27407983194356e-09!GO:0006333;chromatin assembly or disassembly;1.04880280262816e-08!GO:0015078;hydrogen ion transmembrane transporter activity;1.06595865332545e-08!GO:0015630;microtubule cytoskeleton;1.11624061536437e-08!GO:0006732;coenzyme metabolic process;1.17522099280584e-08!GO:0048519;negative regulation of biological process;1.52525717635308e-08!GO:0006403;RNA localization;1.617942555744e-08!GO:0006163;purine nucleotide metabolic process;1.78992056413456e-08!GO:0015986;ATP synthesis coupled proton transport;2.23136734466039e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.23136734466039e-08!GO:0008565;protein transporter activity;2.3890717738277e-08!GO:0031324;negative regulation of cellular metabolic process;2.55540302329738e-08!GO:0050657;nucleic acid transport;2.62998806784358e-08!GO:0051236;establishment of RNA localization;2.62998806784358e-08!GO:0050658;RNA transport;2.62998806784358e-08!GO:0005789;endoplasmic reticulum membrane;2.68466666062761e-08!GO:0032446;protein modification by small protein conjugation;2.91282340821051e-08!GO:0009055;electron carrier activity;3.08484003486832e-08!GO:0051246;regulation of protein metabolic process;3.99722045868815e-08!GO:0006164;purine nucleotide biosynthetic process;4.34650323490107e-08!GO:0009260;ribonucleotide biosynthetic process;4.46696293785229e-08!GO:0009142;nucleoside triphosphate biosynthetic process;4.65257332219536e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.65257332219536e-08!GO:0009150;purine ribonucleotide metabolic process;5.3374693163628e-08!GO:0009892;negative regulation of metabolic process;5.49543390340792e-08!GO:0009199;ribonucleoside triphosphate metabolic process;6.10405964276866e-08!GO:0016567;protein ubiquitination;6.15518138314386e-08!GO:0016469;proton-transporting two-sector ATPase complex;6.28429624222859e-08!GO:0009141;nucleoside triphosphate metabolic process;7.16863574077799e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;7.43898172617186e-08!GO:0004812;aminoacyl-tRNA ligase activity;7.43898172617186e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;7.43898172617186e-08!GO:0019829;cation-transporting ATPase activity;7.52612432171602e-08!GO:0046930;pore complex;8.45042559297828e-08!GO:0043038;amino acid activation;8.63123256908926e-08!GO:0006418;tRNA aminoacylation for protein translation;8.63123256908926e-08!GO:0043039;tRNA aminoacylation;8.63123256908926e-08!GO:0009056;catabolic process;9.05270798286916e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.01444129483139e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.01444129483139e-07!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.09358020431739e-07!GO:0009152;purine ribonucleotide biosynthetic process;1.2575690705069e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.27220210812484e-07!GO:0009144;purine nucleoside triphosphate metabolic process;1.27220210812484e-07!GO:0043566;structure-specific DNA binding;1.29909849365731e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.49779618779188e-07!GO:0010468;regulation of gene expression;1.73197643334281e-07!GO:0006364;rRNA processing;2.15085168250337e-07!GO:0006754;ATP biosynthetic process;2.84404446135483e-07!GO:0006753;nucleoside phosphate metabolic process;2.84404446135483e-07!GO:0016072;rRNA metabolic process;2.88273014576934e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.94386701188162e-07!GO:0000775;chromosome, pericentric region;3.03977272493545e-07!GO:0051170;nuclear import;3.22663651953531e-07!GO:0009060;aerobic respiration;3.40739650194361e-07!GO:0006357;regulation of transcription from RNA polymerase II promoter;3.76847488538675e-07!GO:0044440;endosomal part;4.26764204213983e-07!GO:0010008;endosome membrane;4.26764204213983e-07!GO:0003697;single-stranded DNA binding;4.91768878953862e-07!GO:0046034;ATP metabolic process;4.93395084095298e-07!GO:0016563;transcription activator activity;5.62024056522711e-07!GO:0065007;biological regulation;6.00904789956821e-07!GO:0005667;transcription factor complex;7.5039293566636e-07!GO:0005819;spindle;7.51291108379122e-07!GO:0045333;cellular respiration;7.93866068715153e-07!GO:0006606;protein import into nucleus;8.44249113081008e-07!GO:0030120;vesicle coat;8.77517278103002e-07!GO:0030662;coated vesicle membrane;8.77517278103002e-07!GO:0005839;proteasome core complex (sensu Eukaryota);8.88222142554344e-07!GO:0043069;negative regulation of programmed cell death;9.17960552607793e-07!GO:0007005;mitochondrion organization and biogenesis;9.65828720738443e-07!GO:0032774;RNA biosynthetic process;1.01982110582784e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.05536632426128e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.10786635491235e-06!GO:0051028;mRNA transport;1.19289190044626e-06!GO:0043066;negative regulation of apoptosis;1.23407573148202e-06!GO:0005788;endoplasmic reticulum lumen;1.23407573148202e-06!GO:0016568;chromatin modification;1.23758316100627e-06!GO:0044431;Golgi apparatus part;1.24650797856525e-06!GO:0016564;transcription repressor activity;1.26032481849126e-06!GO:0006916;anti-apoptosis;1.26596437175469e-06!GO:0000151;ubiquitin ligase complex;1.31107930385807e-06!GO:0006351;transcription, DNA-dependent;1.32482462352398e-06!GO:0003713;transcription coactivator activity;1.48687750814455e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.51502298590879e-06!GO:0000245;spliceosome assembly;1.53115598436681e-06!GO:0006334;nucleosome assembly;1.56154913397632e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.729227514175e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.80420935245921e-06!GO:0007051;spindle organization and biogenesis;1.80896941810636e-06!GO:0005813;centrosome;1.93538224942471e-06!GO:0048475;coated membrane;1.97170546198549e-06!GO:0030117;membrane coat;1.97170546198549e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.26066264717344e-06!GO:0051188;cofactor biosynthetic process;2.58279202196677e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.61188315460412e-06!GO:0031497;chromatin assembly;2.76276552554281e-06!GO:0003714;transcription corepressor activity;3.03205435600181e-06!GO:0006261;DNA-dependent DNA replication;3.19469973203112e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.37766204036267e-06!GO:0016779;nucleotidyltransferase activity;3.4133206525143e-06!GO:0005815;microtubule organizing center;3.90938539602848e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.97129119159386e-06!GO:0045259;proton-transporting ATP synthase complex;4.60825341438234e-06!GO:0006613;cotranslational protein targeting to membrane;4.81283921876882e-06!GO:0004298;threonine endopeptidase activity;5.38019213937066e-06!GO:0045449;regulation of transcription;5.61577908657997e-06!GO:0005770;late endosome;7.38486989820726e-06!GO:0006099;tricarboxylic acid cycle;1.23670281262918e-05!GO:0046356;acetyl-CoA catabolic process;1.23670281262918e-05!GO:0051187;cofactor catabolic process;1.37650432701426e-05!GO:0016481;negative regulation of transcription;1.4379077523683e-05!GO:0003724;RNA helicase activity;1.45443897634687e-05!GO:0009117;nucleotide metabolic process;1.54481623308173e-05!GO:0051789;response to protein stimulus;1.58522449144759e-05!GO:0006986;response to unfolded protein;1.58522449144759e-05!GO:0051427;hormone receptor binding;1.60327083221096e-05!GO:0003677;DNA binding;1.68536288706694e-05!GO:0005773;vacuole;1.70891824338972e-05!GO:0006752;group transfer coenzyme metabolic process;1.7390163335941e-05!GO:0005798;Golgi-associated vesicle;2.2744618361959e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.41511432307211e-05!GO:0003924;GTPase activity;2.46706545351353e-05!GO:0016740;transferase activity;3.18004867033932e-05!GO:0043623;cellular protein complex assembly;3.43406067911391e-05!GO:0030867;rough endoplasmic reticulum membrane;3.43594348581648e-05!GO:0008654;phospholipid biosynthetic process;3.48548651599686e-05!GO:0035257;nuclear hormone receptor binding;3.56125013075863e-05!GO:0000075;cell cycle checkpoint;4.58672008021215e-05!GO:0006084;acetyl-CoA metabolic process;4.93491881484419e-05!GO:0065009;regulation of a molecular function;5.16659945123529e-05!GO:0009109;coenzyme catabolic process;5.21745890493493e-05!GO:0016023;cytoplasmic membrane-bound vesicle;5.53699587499312e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.69329917641777e-05!GO:0031988;membrane-bound vesicle;5.75530898761413e-05!GO:0009108;coenzyme biosynthetic process;6.09319540798006e-05!GO:0019843;rRNA binding;6.18417795805835e-05!GO:0015980;energy derivation by oxidation of organic compounds;6.22330297654733e-05!GO:0000139;Golgi membrane;6.32216823412327e-05!GO:0000323;lytic vacuole;6.42560664670024e-05!GO:0005764;lysosome;6.42560664670024e-05!GO:0045786;negative regulation of progression through cell cycle;6.42560664670024e-05!GO:0006355;regulation of transcription, DNA-dependent;7.50372291779045e-05!GO:0016787;hydrolase activity;8.09232175093116e-05!GO:0048522;positive regulation of cellular process;8.9073183867309e-05!GO:0005657;replication fork;0.000100350427030493!GO:0000776;kinetochore;0.000100350427030493!GO:0031252;leading edge;0.000114255670859651!GO:0042802;identical protein binding;0.000121644287216849!GO:0043021;ribonucleoprotein binding;0.000122926130679123!GO:0008361;regulation of cell size;0.000136403501176276!GO:0005769;early endosome;0.000140160757368553!GO:0005762;mitochondrial large ribosomal subunit;0.000144981918860289!GO:0000315;organellar large ribosomal subunit;0.000144981918860289!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000147505850648455!GO:0006793;phosphorus metabolic process;0.000155327257828512!GO:0006796;phosphate metabolic process;0.000155327257828512!GO:0016363;nuclear matrix;0.000168804557179139!GO:0051168;nuclear export;0.000220782666964887!GO:0045454;cell redox homeostasis;0.000248900704900342!GO:0051329;interphase of mitotic cell cycle;0.000251195898340609!GO:0016049;cell growth;0.000256177383732911!GO:0003684;damaged DNA binding;0.000261382517113188!GO:0048471;perinuclear region of cytoplasm;0.000271469884601644!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000281277597381121!GO:0000314;organellar small ribosomal subunit;0.000291585872357366!GO:0005763;mitochondrial small ribosomal subunit;0.000291585872357366!GO:0051052;regulation of DNA metabolic process;0.000315418140143435!GO:0006302;double-strand break repair;0.000315418140143435!GO:0006402;mRNA catabolic process;0.000318885699869435!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000355213129711348!GO:0015399;primary active transmembrane transporter activity;0.000355213129711348!GO:0016310;phosphorylation;0.000378929025902668!GO:0031982;vesicle;0.000389896780906985!GO:0003682;chromatin binding;0.000412362359964094!GO:0016859;cis-trans isomerase activity;0.000424261867100288!GO:0008186;RNA-dependent ATPase activity;0.000424261867100288!GO:0005525;GTP binding;0.000438858741563563!GO:0007088;regulation of mitosis;0.000454141323710385!GO:0003899;DNA-directed RNA polymerase activity;0.000466595743789213!GO:0007010;cytoskeleton organization and biogenesis;0.000474612104458443!GO:0031410;cytoplasmic vesicle;0.000477134787501683!GO:0003690;double-stranded DNA binding;0.000482339600631574!GO:0007052;mitotic spindle organization and biogenesis;0.000492058115143042!GO:0006414;translational elongation;0.000510408966162745!GO:0003729;mRNA binding;0.000524000023579601!GO:0051325;interphase;0.000546761646676037!GO:0005885;Arp2/3 protein complex;0.000583136345930064!GO:0051252;regulation of RNA metabolic process;0.000617235402466398!GO:0006612;protein targeting to membrane;0.00063235267166711!GO:0031072;heat shock protein binding;0.00066007220425965!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000685627135510532!GO:0006401;RNA catabolic process;0.000689692274137601!GO:0005791;rough endoplasmic reticulum;0.000697915748644857!GO:0033116;ER-Golgi intermediate compartment membrane;0.000727420160784472!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000777812153401976!GO:0046489;phosphoinositide biosynthetic process;0.0007944719497182!GO:0046474;glycerophospholipid biosynthetic process;0.0007944719497182!GO:0015992;proton transport;0.000854221394413918!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000865162631937949!GO:0005048;signal sequence binding;0.000879750527878217!GO:0006818;hydrogen transport;0.000879750527878217!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000883799236075323!GO:0000786;nucleosome;0.00088452414544617!GO:0030521;androgen receptor signaling pathway;0.000906364944836209!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00097571694403717!GO:0008094;DNA-dependent ATPase activity;0.00105903832923593!GO:0004004;ATP-dependent RNA helicase activity;0.00111791453257827!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00116235132725069!GO:0007059;chromosome segregation;0.00126362177646465!GO:0042770;DNA damage response, signal transduction;0.00142030264122231!GO:0048500;signal recognition particle;0.00144757200653742!GO:0007093;mitotic cell cycle checkpoint;0.00144815784939762!GO:0019899;enzyme binding;0.00161030597637148!GO:0006289;nucleotide-excision repair;0.00170280545057296!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00170448702023395!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00170448702023395!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00170448702023395!GO:0045941;positive regulation of transcription;0.00171493490395814!GO:0043681;protein import into mitochondrion;0.0017496925239223!GO:0006310;DNA recombination;0.00179347731077695!GO:0006091;generation of precursor metabolites and energy;0.00179347731077695!GO:0016491;oxidoreductase activity;0.0018297156332836!GO:0007243;protein kinase cascade;0.00186851350645745!GO:0043488;regulation of mRNA stability;0.00187137319551991!GO:0043487;regulation of RNA stability;0.00187137319551991!GO:0006891;intra-Golgi vesicle-mediated transport;0.00203198632662039!GO:0005874;microtubule;0.00208344865606128!GO:0019867;outer membrane;0.00208344865606128!GO:0003702;RNA polymerase II transcription factor activity;0.00224394904336981!GO:0030663;COPI coated vesicle membrane;0.00251002825209763!GO:0030126;COPI vesicle coat;0.00251002825209763!GO:0001558;regulation of cell growth;0.00267186713625523!GO:0008168;methyltransferase activity;0.00283157932574828!GO:0031968;organelle outer membrane;0.00283157932574828!GO:0044452;nucleolar part;0.00291445855738566!GO:0043492;ATPase activity, coupled to movement of substances;0.00295231569920615!GO:0006497;protein amino acid lipidation;0.00296048762163999!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00300139353422687!GO:0043065;positive regulation of apoptosis;0.0030026656188062!GO:0043284;biopolymer biosynthetic process;0.00300971213082852!GO:0016197;endosome transport;0.00306190141740901!GO:0006352;transcription initiation;0.00308864002059554!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00310365537253115!GO:0045047;protein targeting to ER;0.00310365537253115!GO:0008312;7S RNA binding;0.00312636194372627!GO:0030132;clathrin coat of coated pit;0.00323477175177402!GO:0045893;positive regulation of transcription, DNA-dependent;0.00326475221275634!GO:0000059;protein import into nucleus, docking;0.00331459360105874!GO:0016741;transferase activity, transferring one-carbon groups;0.00335301143426218!GO:0009165;nucleotide biosynthetic process;0.00336756969296739!GO:0030518;steroid hormone receptor signaling pathway;0.00338610538920219!GO:0042158;lipoprotein biosynthetic process;0.00339590984685499!GO:0005637;nuclear inner membrane;0.00340128869436196!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.003502376741041!GO:0015631;tubulin binding;0.00354130862234605!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00356656433943461!GO:0015002;heme-copper terminal oxidase activity;0.00356656433943461!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00356656433943461!GO:0004129;cytochrome-c oxidase activity;0.00356656433943461!GO:0000049;tRNA binding;0.003607447867124!GO:0007034;vacuolar transport;0.003607447867124!GO:0030133;transport vesicle;0.003607447867124!GO:0006275;regulation of DNA replication;0.00373976390875982!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00374069002817088!GO:0045892;negative regulation of transcription, DNA-dependent;0.00378550372352858!GO:0008632;apoptotic program;0.00390204799141857!GO:0032561;guanyl ribonucleotide binding;0.00392869255116424!GO:0019001;guanyl nucleotide binding;0.00392869255116424!GO:0043068;positive regulation of programmed cell death;0.00400179037020763!GO:0050790;regulation of catalytic activity;0.00416486669103605!GO:0006626;protein targeting to mitochondrion;0.0042899555346332!GO:0007021;tubulin folding;0.00435744674464184!GO:0003711;transcription elongation regulator activity;0.00442106458348673!GO:0031902;late endosome membrane;0.00453303843685614!GO:0045045;secretory pathway;0.00457231677829403!GO:0008270;zinc ion binding;0.00463021784578952!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00465442710700458!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00470996449809934!GO:0030137;COPI-coated vesicle;0.00471521545229429!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00501531042047931!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00503223364385572!GO:0003678;DNA helicase activity;0.00513021233403044!GO:0046483;heterocycle metabolic process;0.00513361300475889!GO:0005684;U2-dependent spliceosome;0.00537155697930158!GO:0046519;sphingoid metabolic process;0.00545546225864914!GO:0043624;cellular protein complex disassembly;0.00548130141883676!GO:0048518;positive regulation of biological process;0.00571447708666523!GO:0000922;spindle pole;0.00585317181440737!GO:0048468;cell development;0.00589851046908213!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00590175801982754!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00590175801982754!GO:0016044;membrane organization and biogenesis;0.0059955574392455!GO:0006839;mitochondrial transport;0.00600655147214606!GO:0007017;microtubule-based process;0.00600655147214606!GO:0035258;steroid hormone receptor binding;0.00605361117385373!GO:0006650;glycerophospholipid metabolic process;0.00609103310627025!GO:0006509;membrane protein ectodomain proteolysis;0.0061067502813796!GO:0033619;membrane protein proteolysis;0.0061067502813796!GO:0051087;chaperone binding;0.00628585821643227!GO:0006505;GPI anchor metabolic process;0.00633441611038131!GO:0008047;enzyme activator activity;0.00633441611038131!GO:0046467;membrane lipid biosynthetic process;0.00647159186231585!GO:0030658;transport vesicle membrane;0.00686512992502081!GO:0008139;nuclear localization sequence binding;0.00693828229093814!GO:0006506;GPI anchor biosynthetic process;0.00693828229093814!GO:0006284;base-excision repair;0.00695653884287186!GO:0016584;nucleosome positioning;0.00721057492735142!GO:0005905;coated pit;0.00743559986253446!GO:0030118;clathrin coat;0.00765140668891455!GO:0051101;regulation of DNA binding;0.00770229748552323!GO:0016251;general RNA polymerase II transcription factor activity;0.00781106188455042!GO:0008033;tRNA processing;0.00784903710421003!GO:0046914;transition metal ion binding;0.00785077958237489!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00785077958237489!GO:0006611;protein export from nucleus;0.00785077958237489!GO:0007041;lysosomal transport;0.00785077958237489!GO:0051098;regulation of binding;0.00786014485392513!GO:0005876;spindle microtubule;0.00792428591358915!GO:0005741;mitochondrial outer membrane;0.00798231110987363!GO:0048487;beta-tubulin binding;0.00819793245493342!GO:0046983;protein dimerization activity;0.00848443759183655!GO:0050681;androgen receptor binding;0.00864005026284995!GO:0005774;vacuolar membrane;0.00883115221427488!GO:0000209;protein polyubiquitination;0.00884092709397126!GO:0033673;negative regulation of kinase activity;0.00919623871304384!GO:0006469;negative regulation of protein kinase activity;0.00919623871304384!GO:0006672;ceramide metabolic process;0.00919836821693491!GO:0006383;transcription from RNA polymerase III promoter;0.00929882722891722!GO:0009112;nucleobase metabolic process;0.00946942084600908!GO:0008092;cytoskeletal protein binding;0.00952310515947781!GO:0043022;ribosome binding;0.00956305795546229!GO:0030027;lamellipodium;0.00974240261473225!GO:0022890;inorganic cation transmembrane transporter activity;0.0100551194686772!GO:0007040;lysosome organization and biogenesis;0.010360696436742!GO:0051348;negative regulation of transferase activity;0.0105967310546048!GO:0006417;regulation of translation;0.0107880179314462!GO:0032984;macromolecular complex disassembly;0.0107880179314462!GO:0016272;prefoldin complex;0.0112682383655422!GO:0032200;telomere organization and biogenesis;0.0114449660212797!GO:0000723;telomere maintenance;0.0114449660212797!GO:0005869;dynactin complex;0.0115043339931354!GO:0006892;post-Golgi vesicle-mediated transport;0.0118865697064048!GO:0017166;vinculin binding;0.0122586376574851!GO:0005100;Rho GTPase activator activity;0.0123460247544976!GO:0006950;response to stress;0.0124033858953268!GO:0030384;phosphoinositide metabolic process;0.0124955997244611!GO:0004518;nuclease activity;0.0124955997244611!GO:0043433;negative regulation of transcription factor activity;0.0125004389965654!GO:0005832;chaperonin-containing T-complex;0.0127677805906167!GO:0031124;mRNA 3'-end processing;0.0130639265092739!GO:0046966;thyroid hormone receptor binding;0.0131360792316176!GO:0051338;regulation of transferase activity;0.0131876668028185!GO:0042670;retinal cone cell differentiation;0.0132567281888549!GO:0051281;positive regulation of release of sequestered calcium ion into cytosol;0.0132567281888549!GO:0046549;retinal cone cell development;0.0132567281888549!GO:0044262;cellular carbohydrate metabolic process;0.0132710958795872!GO:0032508;DNA duplex unwinding;0.0132948722047873!GO:0032392;DNA geometric change;0.0132948722047873!GO:0046822;regulation of nucleocytoplasmic transport;0.0136758211674657!GO:0009967;positive regulation of signal transduction;0.013900128962!GO:0008022;protein C-terminus binding;0.0141446432892319!GO:0045792;negative regulation of cell size;0.0141446432892319!GO:0008180;signalosome;0.0143096309695508!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0143135898552304!GO:0000339;RNA cap binding;0.0143547170330812!GO:0040008;regulation of growth;0.0146900738999359!GO:0051271;negative regulation of cell motility;0.0148551546271151!GO:0031577;spindle checkpoint;0.0151258950271131!GO:0043241;protein complex disassembly;0.0152586436782347!GO:0005862;muscle thin filament tropomyosin;0.0152586436782347!GO:0004527;exonuclease activity;0.0153406446679675!GO:0030032;lamellipodium biogenesis;0.0154029093402445!GO:0008629;induction of apoptosis by intracellular signals;0.0156350264940777!GO:0030125;clathrin vesicle coat;0.0158710275817685!GO:0030665;clathrin coated vesicle membrane;0.0158710275817685!GO:0030660;Golgi-associated vesicle membrane;0.0160433198604936!GO:0009116;nucleoside metabolic process;0.0160578492804461!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0161787390207148!GO:0007050;cell cycle arrest;0.0165403908704446!GO:0004674;protein serine/threonine kinase activity;0.0166466833476093!GO:0001726;ruffle;0.0166466833476093!GO:0000096;sulfur amino acid metabolic process;0.0170944158595349!GO:0030308;negative regulation of cell growth;0.0172362717190647!GO:0048146;positive regulation of fibroblast proliferation;0.0174425829541127!GO:0031529;ruffle organization and biogenesis;0.0175518652794961!GO:0008017;microtubule binding;0.0177108092954659!GO:0007006;mitochondrial membrane organization and biogenesis;0.0177108092954659!GO:0006595;polyamine metabolic process;0.0179023989458491!GO:0030880;RNA polymerase complex;0.0180915538821427!GO:0008250;oligosaccharyl transferase complex;0.0188149084803618!GO:0007004;telomere maintenance via telomerase;0.0188821260950985!GO:0044437;vacuolar part;0.0189784635769558!GO:0031901;early endosome membrane;0.0192633023306396!GO:0030119;AP-type membrane coat adaptor complex;0.0199423326207459!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0201504755835958!GO:0007033;vacuole organization and biogenesis;0.0203015283625079!GO:0031326;regulation of cellular biosynthetic process;0.0204482041104093!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0204759392383514!GO:0004177;aminopeptidase activity;0.0210056882416531!GO:0048144;fibroblast proliferation;0.021036317067879!GO:0048145;regulation of fibroblast proliferation;0.021036317067879!GO:0006405;RNA export from nucleus;0.0210431601642638!GO:0006778;porphyrin metabolic process;0.0210431601642638!GO:0033013;tetrapyrrole metabolic process;0.0210431601642638!GO:0030176;integral to endoplasmic reticulum membrane;0.0210431601642638!GO:0043549;regulation of kinase activity;0.0210773139018548!GO:0051128;regulation of cellular component organization and biogenesis;0.0214141349057267!GO:0000118;histone deacetylase complex;0.0219637722371501!GO:0003746;translation elongation factor activity;0.0221881548852096!GO:0051920;peroxiredoxin activity;0.0223925695064404!GO:0030134;ER to Golgi transport vesicle;0.0227083285060315!GO:0000152;nuclear ubiquitin ligase complex;0.0229312356841085!GO:0030522;intracellular receptor-mediated signaling pathway;0.0229312356841085!GO:0003725;double-stranded RNA binding;0.0231130735993387!GO:0006268;DNA unwinding during replication;0.023458862948562!GO:0031570;DNA integrity checkpoint;0.0252073586936169!GO:0016853;isomerase activity;0.0252345478057087!GO:0008637;apoptotic mitochondrial changes;0.0253962989744764!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0256991347310473!GO:0000428;DNA-directed RNA polymerase complex;0.0256991347310473!GO:0006607;NLS-bearing substrate import into nucleus;0.0256991347310473!GO:0042393;histone binding;0.0256991347310473!GO:0006144;purine base metabolic process;0.0261694749262795!GO:0043154;negative regulation of caspase activity;0.0262079729465407!GO:0005669;transcription factor TFIID complex;0.0262905217701951!GO:0030336;negative regulation of cell migration;0.0264807608927383!GO:0005765;lysosomal membrane;0.0271093958372565!GO:0045859;regulation of protein kinase activity;0.0281970386781373!GO:0032940;secretion by cell;0.0286433016722579!GO:0006458;'de novo' protein folding;0.0290405984164118!GO:0051084;'de novo' posttranslational protein folding;0.0290405984164118!GO:0003923;GPI-anchor transamidase activity;0.0290405984164118!GO:0016255;attachment of GPI anchor to protein;0.0290405984164118!GO:0042765;GPI-anchor transamidase complex;0.0290405984164118!GO:0004576;oligosaccharyl transferase activity;0.0290725650607264!GO:0006376;mRNA splice site selection;0.0293050743912368!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0293050743912368!GO:0045926;negative regulation of growth;0.0303529490086889!GO:0047485;protein N-terminus binding;0.0305904060212029!GO:0043596;nuclear replication fork;0.0309270703967089!GO:0000781;chromosome, telomeric region;0.0311124606436263!GO:0007264;small GTPase mediated signal transduction;0.0313087138650389!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0314711879005413!GO:0030503;regulation of cell redox homeostasis;0.0317170627962818!GO:0009893;positive regulation of metabolic process;0.0320913626063181!GO:0035035;histone acetyltransferase binding;0.032451453015074!GO:0032906;transforming growth factor-beta2 production;0.032451453015074!GO:0032909;regulation of transforming growth factor-beta2 production;0.032451453015074!GO:0048660;regulation of smooth muscle cell proliferation;0.0325209547002379!GO:0031625;ubiquitin protein ligase binding;0.0325209547002379!GO:0030131;clathrin adaptor complex;0.0327405721394932!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0327471557044476!GO:0010257;NADH dehydrogenase complex assembly;0.0327471557044476!GO:0033108;mitochondrial respiratory chain complex assembly;0.0327471557044476!GO:0008426;protein kinase C inhibitor activity;0.0332506103305472!GO:0040013;negative regulation of locomotion;0.033646309190867!GO:0007094;mitotic cell cycle spindle assembly checkpoint;0.0337400027161002!GO:0030911;TPR domain binding;0.0339447329296485!GO:0005096;GTPase activator activity;0.0339447329296485!GO:0009889;regulation of biosynthetic process;0.0340946038437196!GO:0043189;H4/H2A histone acetyltransferase complex;0.0343396365008085!GO:0035267;NuA4 histone acetyltransferase complex;0.0347967434857333!GO:0009066;aspartate family amino acid metabolic process;0.0347967434857333!GO:0016407;acetyltransferase activity;0.0348097547468369!GO:0001836;release of cytochrome c from mitochondria;0.0351978531782701!GO:0051090;regulation of transcription factor activity;0.0353034197322763!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0353034197322763!GO:0055083;monovalent inorganic anion homeostasis;0.0353034197322763!GO:0055064;chloride ion homeostasis;0.0353034197322763!GO:0030644;cellular chloride ion homeostasis;0.0353034197322763!GO:0031123;RNA 3'-end processing;0.0354774315412674!GO:0050750;low-density lipoprotein receptor binding;0.0359044241125938!GO:0043086;negative regulation of catalytic activity;0.0363938727206713!GO:0043281;regulation of caspase activity;0.0369670347752302!GO:0005784;translocon complex;0.0370890095776601!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0373981314114045!GO:0008538;proteasome activator activity;0.0378967037634546!GO:0031371;ubiquitin conjugating enzyme complex;0.0379304904501797!GO:0000792;heterochromatin;0.0379308459591062!GO:0004563;beta-N-acetylhexosaminidase activity;0.0381912769968598!GO:0018196;peptidyl-asparagine modification;0.0383024163232382!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0383024163232382!GO:0033239;negative regulation of amine metabolic process;0.0383024163232382!GO:0045763;negative regulation of amino acid metabolic process;0.0383024163232382!GO:0001933;negative regulation of protein amino acid phosphorylation;0.0383024163232382!GO:0042168;heme metabolic process;0.0383677627328671!GO:0022415;viral reproductive process;0.038450777845338!GO:0005680;anaphase-promoting complex;0.0392266050563543!GO:0030496;midbody;0.0392266050563543!GO:0000082;G1/S transition of mitotic cell cycle;0.0392266050563543!GO:0008408;3'-5' exonuclease activity;0.0413268359713852!GO:0030149;sphingolipid catabolic process;0.0415400583341307!GO:0030127;COPII vesicle coat;0.0421599638698264!GO:0012507;ER to Golgi transport vesicle membrane;0.0421599638698264!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0423563414594637!GO:0042026;protein refolding;0.0423812565997113!GO:0000228;nuclear chromosome;0.0423938857934912!GO:0008276;protein methyltransferase activity;0.0423938857934912!GO:0050839;cell adhesion molecule binding;0.0423938857934912!GO:0030140;trans-Golgi network transport vesicle;0.0425860451016871!GO:0007346;regulation of progression through mitotic cell cycle;0.0433361785831294!GO:0006378;mRNA polyadenylation;0.0439782589612011!GO:0016126;sterol biosynthetic process;0.046152977259948!GO:0009451;RNA modification;0.046152977259948!GO:0022411;cellular component disassembly;0.0463864381994649!GO:0017134;fibroblast growth factor binding;0.0464884616605347!GO:0030036;actin cytoskeleton organization and biogenesis;0.0468749045825296!GO:0006984;ER-nuclear signaling pathway;0.0469285854995914!GO:0051540;metal cluster binding;0.0469285854995914!GO:0051536;iron-sulfur cluster binding;0.0469285854995914!GO:0030508;thiol-disulfide exchange intermediate activity;0.0470936041745357!GO:0008601;protein phosphatase type 2A regulator activity;0.0473586016400482!GO:0045334;clathrin-coated endocytic vesicle;0.0473586016400482!GO:0051336;regulation of hydrolase activity;0.0474662994178862!GO:0007569;cell aging;0.0474662994178862!GO:0000077;DNA damage checkpoint;0.0477785052931461!GO:0005758;mitochondrial intermembrane space;0.0481425677972755!GO:0007030;Golgi organization and biogenesis;0.0482552394363872!GO:0051085;chaperone cofactor-dependent protein folding;0.0485753025786607!GO:0006360;transcription from RNA polymerase I promoter;0.0493200152012283
|sample_id=10443
|sample_id=10443
|sample_note=
|sample_note=
Line 76: Line 98:
|sample_tissue=ANATOMICAL SYSTEM
|sample_tissue=ANATOMICAL SYSTEM
|top_motifs=HBP1_HMGB_SSRP1_UBTF:3.2872623684;PDX1:2.00811885541;CDX1,2,4:1.48587891535;AIRE:1.39976003818;PAX4:1.37354642507;NKX6-1,2:1.34128812378;NKX2-3_NKX2-5:1.33197744756;ZNF148:1.32957027134;POU1F1:1.3276919437;FOXD3:1.133492663;RXR{A,B,G}:1.12267838824;RBPJ:1.04453803248;NFY{A,B,C}:0.970479639428;XCPE1{core}:0.967286151607;HSF1,2:0.944246020282;STAT1,3:0.919760787989;EN1,2:0.884387219211;GFI1:0.867658218383;GFI1B:0.862422405422;EVI1:0.829231246785;TEF:0.824838607509;ONECUT1,2:0.822091690224;ZNF384:0.773898687234;TP53:0.725780010081;ZNF143:0.720273457668;FOX{I1,J2}:0.713264021182;NRF1:0.702448412387;MYB:0.697084668436;LMO2:0.690243843022;POU5F1:0.689589763773;PITX1..3:0.685112224933;E2F1..5:0.656635010874;ZBTB16:0.65615934004;PAX8:0.628894587304;FOXQ1:0.624094619765;HOXA9_MEIS1:0.619573516319;PBX1:0.595979331749;PPARG:0.578039920521;NKX3-1:0.561322941457;HOX{A5,B5}:0.553988585303;OCT4_SOX2{dimer}:0.532881349349;GZF1:0.509687305461;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.500902395433;ZIC1..3:0.489553190151;PRRX1,2:0.485294120372;TEAD1:0.485113497665;bHLH_family:0.48198365126;TAL1_TCF{3,4,12}:0.46702500888;NR6A1:0.451496614146;LHX3,4:0.450833794569;MZF1:0.450476926969;GATA4:0.438001166455;NR3C1:0.437115673149;HMGA1,2:0.424060666572;HOX{A6,A7,B6,B7}:0.418663452315;NFIX:0.412923568901;FOXL1:0.40060005516;GCM1,2:0.39750611034;SREBF1,2:0.394912179799;STAT5{A,B}:0.373082848216;VSX1,2:0.346945067987;CDC5L:0.34554581681;UFEwm:0.306709953598;HOX{A4,D4}:0.300838092338;ALX4:0.273626968154;FOXP1:0.270582021995;CUX2:0.266795655376;TOPORS:0.246916493842;PRDM1:0.231033030098;IKZF2:0.219831570253;SP1:0.178522343832;IRF7:0.178346099155;BACH2:0.139771938244;FOSL2:0.131523093538;KLF4:0.121129399388;HES1:0.0990019886885;ELK1,4_GABP{A,B1}:0.0935854123893;ARID5B:0.0667275482118;POU3F1..4:0.0664315822972;TFDP1:0.0531244412446;PAX3,7:0.0280837127459;SOX{8,9,10}:0.0241472566283;MEF2{A,B,C,D}:0.00320479588323;ZBTB6:-0.000887851895816;RREB1:-0.00504723342436;RFX2..5_RFXANK_RFXAP:-0.0268629132074;MTF1:-0.027100415493;ESR1:-0.0377064222059;FOXM1:-0.0398772004491;IRF1,2:-0.0558486375921;GTF2I:-0.0616117305391;CRX:-0.0710500553672;NFE2:-0.0829917310284;FOXP3:-0.09008295751;RFX1:-0.101991040604;NKX2-2,8:-0.126237191336;HAND1,2:-0.134039773413;FOS_FOS{B,L1}_JUN{B,D}:-0.163552790605;DBP:-0.164197850031;MAZ:-0.175022773003;ZFP161:-0.178587867426;GTF2A1,2:-0.180014925805;NFIL3:-0.188684077184;DMAP1_NCOR{1,2}_SMARC:-0.193321477033;MYBL2:-0.193411063294;NFKB1_REL_RELA:-0.200211626713;HLF:-0.203698343436;CEBPA,B_DDIT3:-0.222945723012;SRF:-0.228999788514;FOX{D1,D2}:-0.268750008076;HNF1A:-0.280183759325;SPIB:-0.301410676756;TFAP2{A,C}:-0.325999183783;PATZ1:-0.32731246142;POU2F1..3:-0.345824744484;TBX4,5:-0.354808680714;STAT2,4,6:-0.360276448756;EGR1..3:-0.362102301582;MED-1{core}:-0.378575528123;TGIF1:-0.378710136158;RORA:-0.380582433497;HNF4A_NR2F1,2:-0.390017247355;SNAI1..3:-0.399017697978;ADNP_IRX_SIX_ZHX:-0.402696111604;TFAP2B:-0.41261819306;AHR_ARNT_ARNT2:-0.423234122907;EP300:-0.423809472283;REST:-0.425275314664;FOXN1:-0.432979636275;RUNX1..3:-0.436520997882;NANOG{mouse}:-0.475356601567;SOX2:-0.480215003148;EBF1:-0.485617144401;ZEB1:-0.49434215903;BPTF:-0.499112576503;FOXA2:-0.499624041522;NKX3-2:-0.502162508513;TLX2:-0.504233764693;NHLH1,2:-0.513347507377;MTE{core}:-0.515967913594;ETS1,2:-0.519093307132;NFE2L2:-0.52592155496;PAX5:-0.530789496984;MYOD1:-0.53129010876;NR1H4:-0.539535636611;ELF1,2,4:-0.548900855249;PAX2:-0.552214758091;FOXO1,3,4:-0.554666393398;NKX2-1,4:-0.559761979417;SPI1:-0.586044402876;CREB1:-0.59357165036;GATA6:-0.594140014488;ZNF238:-0.608837871307;ATF4:-0.611789513021;TLX1..3_NFIC{dimer}:-0.616382439368;YY1:-0.617506318307;HIC1:-0.624919680713;HIF1A:-0.639527719429;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.643796860174;ATF5_CREB3:-0.663610192491;XBP1:-0.680809538935;GLI1..3:-0.7052729336;NFATC1..3:-0.708222912339;SOX5:-0.760556952226;MAFB:-0.791847324166;TBP:-0.80421499101;TFCP2:-0.816257770664;ALX1:-0.831821553253;SMAD1..7,9:-0.831975866674;LEF1_TCF7_TCF7L1,2:-0.84511309129;MYFfamily:-0.854636786963;NANOG:-0.87079400366;NFE2L1:-0.877299384056;ATF6:-0.882512269194;AR:-0.883328892571;ATF2:-0.891181025241;BREu{core}:-0.902481136382;SOX17:-0.91699502511;IKZF1:-0.961687297635;NR5A1,2:-0.970483588974;ZNF423:-1.01463823562;JUN:-1.08933493638;RXRA_VDR{dimer}:-1.11121128454;FOX{F1,F2,J1}:-1.15837766714;PAX6:-1.15914190913;PAX1,9:-1.38288670449;ESRRA:-1.54273253681;T:-1.57401783415;POU6F1:-1.62574295292;SPZ1:-1.6604107306;TFAP4:-1.78570121965;HMX1:-1.93147977078
|top_motifs=HBP1_HMGB_SSRP1_UBTF:3.2872623684;PDX1:2.00811885541;CDX1,2,4:1.48587891535;AIRE:1.39976003818;PAX4:1.37354642507;NKX6-1,2:1.34128812378;NKX2-3_NKX2-5:1.33197744756;ZNF148:1.32957027134;POU1F1:1.3276919437;FOXD3:1.133492663;RXR{A,B,G}:1.12267838824;RBPJ:1.04453803248;NFY{A,B,C}:0.970479639428;XCPE1{core}:0.967286151607;HSF1,2:0.944246020282;STAT1,3:0.919760787989;EN1,2:0.884387219211;GFI1:0.867658218383;GFI1B:0.862422405422;EVI1:0.829231246785;TEF:0.824838607509;ONECUT1,2:0.822091690224;ZNF384:0.773898687234;TP53:0.725780010081;ZNF143:0.720273457668;FOX{I1,J2}:0.713264021182;NRF1:0.702448412387;MYB:0.697084668436;LMO2:0.690243843022;POU5F1:0.689589763773;PITX1..3:0.685112224933;E2F1..5:0.656635010874;ZBTB16:0.65615934004;PAX8:0.628894587304;FOXQ1:0.624094619765;HOXA9_MEIS1:0.619573516319;PBX1:0.595979331749;PPARG:0.578039920521;NKX3-1:0.561322941457;HOX{A5,B5}:0.553988585303;OCT4_SOX2{dimer}:0.532881349349;GZF1:0.509687305461;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.500902395433;ZIC1..3:0.489553190151;PRRX1,2:0.485294120372;TEAD1:0.485113497665;bHLH_family:0.48198365126;TAL1_TCF{3,4,12}:0.46702500888;NR6A1:0.451496614146;LHX3,4:0.450833794569;MZF1:0.450476926969;GATA4:0.438001166455;NR3C1:0.437115673149;HMGA1,2:0.424060666572;HOX{A6,A7,B6,B7}:0.418663452315;NFIX:0.412923568901;FOXL1:0.40060005516;GCM1,2:0.39750611034;SREBF1,2:0.394912179799;STAT5{A,B}:0.373082848216;VSX1,2:0.346945067987;CDC5L:0.34554581681;UFEwm:0.306709953598;HOX{A4,D4}:0.300838092338;ALX4:0.273626968154;FOXP1:0.270582021995;CUX2:0.266795655376;TOPORS:0.246916493842;PRDM1:0.231033030098;IKZF2:0.219831570253;SP1:0.178522343832;IRF7:0.178346099155;BACH2:0.139771938244;FOSL2:0.131523093538;KLF4:0.121129399388;HES1:0.0990019886885;ELK1,4_GABP{A,B1}:0.0935854123893;ARID5B:0.0667275482118;POU3F1..4:0.0664315822972;TFDP1:0.0531244412446;PAX3,7:0.0280837127459;SOX{8,9,10}:0.0241472566283;MEF2{A,B,C,D}:0.00320479588323;ZBTB6:-0.000887851895816;RREB1:-0.00504723342436;RFX2..5_RFXANK_RFXAP:-0.0268629132074;MTF1:-0.027100415493;ESR1:-0.0377064222059;FOXM1:-0.0398772004491;IRF1,2:-0.0558486375921;GTF2I:-0.0616117305391;CRX:-0.0710500553672;NFE2:-0.0829917310284;FOXP3:-0.09008295751;RFX1:-0.101991040604;NKX2-2,8:-0.126237191336;HAND1,2:-0.134039773413;FOS_FOS{B,L1}_JUN{B,D}:-0.163552790605;DBP:-0.164197850031;MAZ:-0.175022773003;ZFP161:-0.178587867426;GTF2A1,2:-0.180014925805;NFIL3:-0.188684077184;DMAP1_NCOR{1,2}_SMARC:-0.193321477033;MYBL2:-0.193411063294;NFKB1_REL_RELA:-0.200211626713;HLF:-0.203698343436;CEBPA,B_DDIT3:-0.222945723012;SRF:-0.228999788514;FOX{D1,D2}:-0.268750008076;HNF1A:-0.280183759325;SPIB:-0.301410676756;TFAP2{A,C}:-0.325999183783;PATZ1:-0.32731246142;POU2F1..3:-0.345824744484;TBX4,5:-0.354808680714;STAT2,4,6:-0.360276448756;EGR1..3:-0.362102301582;MED-1{core}:-0.378575528123;TGIF1:-0.378710136158;RORA:-0.380582433497;HNF4A_NR2F1,2:-0.390017247355;SNAI1..3:-0.399017697978;ADNP_IRX_SIX_ZHX:-0.402696111604;TFAP2B:-0.41261819306;AHR_ARNT_ARNT2:-0.423234122907;EP300:-0.423809472283;REST:-0.425275314664;FOXN1:-0.432979636275;RUNX1..3:-0.436520997882;NANOG{mouse}:-0.475356601567;SOX2:-0.480215003148;EBF1:-0.485617144401;ZEB1:-0.49434215903;BPTF:-0.499112576503;FOXA2:-0.499624041522;NKX3-2:-0.502162508513;TLX2:-0.504233764693;NHLH1,2:-0.513347507377;MTE{core}:-0.515967913594;ETS1,2:-0.519093307132;NFE2L2:-0.52592155496;PAX5:-0.530789496984;MYOD1:-0.53129010876;NR1H4:-0.539535636611;ELF1,2,4:-0.548900855249;PAX2:-0.552214758091;FOXO1,3,4:-0.554666393398;NKX2-1,4:-0.559761979417;SPI1:-0.586044402876;CREB1:-0.59357165036;GATA6:-0.594140014488;ZNF238:-0.608837871307;ATF4:-0.611789513021;TLX1..3_NFIC{dimer}:-0.616382439368;YY1:-0.617506318307;HIC1:-0.624919680713;HIF1A:-0.639527719429;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.643796860174;ATF5_CREB3:-0.663610192491;XBP1:-0.680809538935;GLI1..3:-0.7052729336;NFATC1..3:-0.708222912339;SOX5:-0.760556952226;MAFB:-0.791847324166;TBP:-0.80421499101;TFCP2:-0.816257770664;ALX1:-0.831821553253;SMAD1..7,9:-0.831975866674;LEF1_TCF7_TCF7L1,2:-0.84511309129;MYFfamily:-0.854636786963;NANOG:-0.87079400366;NFE2L1:-0.877299384056;ATF6:-0.882512269194;AR:-0.883328892571;ATF2:-0.891181025241;BREu{core}:-0.902481136382;SOX17:-0.91699502511;IKZF1:-0.961687297635;NR5A1,2:-0.970483588974;ZNF423:-1.01463823562;JUN:-1.08933493638;RXRA_VDR{dimer}:-1.11121128454;FOX{F1,F2,J1}:-1.15837766714;PAX6:-1.15914190913;PAX1,9:-1.38288670449;ESRRA:-1.54273253681;T:-1.57401783415;POU6F1:-1.62574295292;SPZ1:-1.6604107306;TFAP4:-1.78570121965;HMX1:-1.93147977078
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10443-106F2;search_select_hide=table117:FF:10443-106F2
}}
}}

Latest revision as of 14:02, 3 June 2020

Name:epithelioid sarcoma cell line:HS-ES-1
Species:Human (Homo sapiens)
Library ID:CNhs11247
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueANATOMICAL SYSTEM
dev stageNA
sexunknown
ageNA
cell typeunclassifiable
cell lineHS-ES-1
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005131
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11247 CAGE DRX007881 DRR008753
Accession ID Hg19

Library idBAMCTSS
CNhs11247 DRZ000178 DRZ001563
Accession ID Hg38

Library idBAMCTSS
CNhs11247 DRZ011528 DRZ012913
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0122
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.345
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial1.073
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.00181
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.0638
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.181
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.109
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0816
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.227
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.091
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.0117
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.284
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.0246
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.127
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.308
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.0689
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11247

Jaspar motifP-value
MA0002.20.0105
MA0003.10.34
MA0004.10.925
MA0006.10.316
MA0007.10.965
MA0009.10.288
MA0014.10.106
MA0017.10.0555
MA0018.21.03352e-4
MA0019.10.57
MA0024.19.83176e-5
MA0025.10.247
MA0027.10.798
MA0028.10.00478
MA0029.10.606
MA0030.10.0121
MA0031.10.589
MA0035.20.268
MA0038.10.02
MA0039.20.00148
MA0040.10.651
MA0041.10.196
MA0042.10.19
MA0043.10.00177
MA0046.10.14
MA0047.20.0819
MA0048.10.0034
MA0050.10.778
MA0051.10.947
MA0052.10.741
MA0055.11.0022e-5
MA0057.10.919
MA0058.10.741
MA0059.10.91
MA0060.13.25124e-24
MA0061.10.161
MA0062.20.318
MA0065.20.802
MA0066.10.701
MA0067.10.528
MA0068.10.339
MA0069.10.785
MA0070.10.0538
MA0071.10.357
MA0072.10.836
MA0073.10.707
MA0074.10.581
MA0076.10.0841
MA0077.10.533
MA0078.10.144
MA0079.20.878
MA0080.21.5785e-10
MA0081.10.0572
MA0083.10.867
MA0084.10.651
MA0087.10.0778
MA0088.10.00426
MA0090.10.274
MA0091.10.356
MA0092.10.734
MA0093.10.879
MA0099.20.919
MA0100.10.0497
MA0101.10.569
MA0102.20.00174
MA0103.10.484
MA0104.20.937
MA0105.10.934
MA0106.10.00808
MA0107.10.144
MA0108.20.0385
MA0111.10.323
MA0112.20.353
MA0113.10.373
MA0114.10.504
MA0115.10.64
MA0116.10.923
MA0117.10.536
MA0119.10.918
MA0122.10.539
MA0124.10.85
MA0125.10.889
MA0131.10.1
MA0135.10.0262
MA0136.13.55967e-9
MA0137.20.182
MA0138.20.0654
MA0139.10.0397
MA0140.10.0291
MA0141.10.016
MA0142.10.322
MA0143.10.207
MA0144.10.612
MA0145.10.804
MA0146.10.141
MA0147.10.756
MA0148.10.056
MA0149.10.499
MA0150.10.171
MA0152.10.467
MA0153.10.331
MA0154.10.13
MA0155.10.541
MA0156.18.48815e-4
MA0157.10.696
MA0159.10.538
MA0160.10.00324
MA0162.10.751
MA0163.10.606
MA0164.10.886
MA0258.10.561
MA0259.10.529



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11247

Novel motifP-value
10.192
100.0761
1000.116
1010.728
1020.655
1030.674
1040.757
1050.499
1060.00374
1070.0213
1080.413
1090.251
110.81
1100.037
1110.784
1120.00587
1130.103
1140.668
1150.593
1160.851
1170.0255
1180.543
1190.43
120.286
1200.471
1210.444
1220.795
1230.42
1240.04
1250.663
1260.663
1270.932
1280.0979
1290.891
130.0288
1300.0387
1310.956
1320.46
1330.0301
1340.577
1350.326
1360.146
1370.941
1380.03
1390.288
140.22
1400.125
1410.746
1420.21
1430.454
1440.366
1450.485
1460.183
1470.805
1480.855
1490.0988
150.909
1500.256
1510.413
1520.725
1530.514
1540.85
1550.799
1560.34
1570.391
1580.217
1590.324
160.447
1600.779
1610.422
1620.263
1630.706
1640.0236
1650.949
1660.332
1670.539
1680.217
1690.32
170.939
180.303
190.865
20.145
200.025
210.638
220.69
230.695
240.452
250.397
260.923
270.178
280.792
290.214
30.529
300.942
310.0825
320.319
330.168
340.166
350.0525
360.699
370.21
380.943
390.546
40.0108
400.939
410.177
420.506
430.951
440.75
450.792
460.824
470.9
480.719
490.233
50.708
500.756
510.721
520.105
530.74
540.501
550.256
560.392
570.925
580.1
590.149
60.841
600.0419
610.732
620.355
630.564
640.622
650.411
664.97679e-12
670.394
680.644
690.337
70.663
700.677
710.711
720.704
730.611
740.797
750.029
760.11
770.963
780.3
790.226
80.365
800.41
810.791
820.705
830.428
840.891
850.407
860.45
870.882
880.524
890.379
90.246
900.0832
910.242
920.424
930.898
940.549
950.00987
960.507
970.806
980.507
990.234



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11247


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
3350 (mesenchymal cell neoplasm)
6193 (epithelioid sarcoma)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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