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{{f5samples
{{f5samples
|id=FF:10444-106F3
|CNhs11248=
|name=glioblastoma cell line:A172
|DRA_sample_Accession=CAGE@SAMD00005163
|sample_id=10444
|HumanCAGEScanFiles=NCig10059;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/glioblastoma%2520cell%2520line%253aA172.NCig10059.10444-106F3.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/glioblastoma%2520cell%2520line%253aA172.NCig10059.10444-106F3.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/glioblastoma%2520cell%2520line%253aA172.NCig10059.10444-106F3.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/glioblastoma%2520cell%2520line%253aA172.NCig10059.10444-106F3.hg19.GCTATA.pairs.bed.gz
|rna_tube_id=106F3
|accession_numbers=CAGE;DRX007897;DRR008769;DRZ000194;DRZ001579;DRZ011544;DRZ012929!CAGE;DRX007898;DRR008770;DRZ000195;DRZ001580;DRZ011545;DRZ012930
|rna_box=106
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000955,UBERON:0004121,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0001017,UBERON:0001016
|rna_position=F3
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002371,CL:0002319,CL:0000095,CL:0000243,CL:0000125,CL:0000255
|sample_cell_lot=
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:3093
|sample_cell_catalog=RCB2530
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0101530,FF:0100711,FF:0100255,FF:0100690,FF:0101531,FF:0100016
|sample_company=RIKEN Bioresource centre
|comment=
|rna_lot_number=
|created_by=
|rna_catalog_number=
|creation_date=
|sample_species=Human (Homo sapiens)
|data_phase=2
|sample_strain=
|datafreeze_phase=2
|sample_dev_stage=
|def=
|sample_tissue=brain
|expression_enrichment_score=chr1:197886461..197886558,+!p1@LHX9!2.45!279.92!LHX9;;chr7:27205136..27205164,-!p1@HOXA9!1.87!72.80!HOXA9;;chr17:46682321..46682362,-!p1@HOXB6!1.74!54.18!HOXB6;;chr2:176969228..176969260,+!p1@HOXD11!1.65!43.41!HOXD11;;chr10:28034739..28034756,-!p1@MKX!1.59!37.76!MKX;;chr2:176969179..176969226,+!p2@HOXD11!1.53!32.53!HOXD11;;chr7:27205106..27205134,-!p2@HOXA9!1.39!23.54!HOXA9;;chr8:60031934..60031986,-!p6@TOX!1.35!21.55!TOX;;chr6:10415276..10415341,-!p2@TFAP2A!1.28!22.07!TFAP2A;;chr2:176969097..176969109,+!p3@HOXD11!1.28!17.99!HOXD11;;chr17:46667594..46667619,-!p1@HOXB3!1.27!17.78!HOXB3;;chr1:170632285..170632309,+!p1@PRRX1!1.24!18.72!PRRX1;;chr1:151032860..151032918,+!p1@MLLT11!1.21!178.24!MLLT11;;chr8:60031682..60031710,-!p2@TOX!1.21!24.58!TOX;;chr17:46692318..46692362,-!p5@HOXB8!1.21!15.06!HOXB8;;chr15:37392094..37392116,-!p6@MEIS2!1.20!18.31!MEIS2;;chr17:46692457..46692484,-!p2@HOXB8!1.20!14.96!HOXB8;;chr5:134369905..134369972,-!p1@PITX1!1.17!21.13!PITX1;;chr8:60031809..60031835,-!p4@TOX!1.16!17.15!TOX;;chr6:10412600..10412637,-!p1@TFAP2A!1.15!22.07!TFAP2A;;chr2:19558373..19558392,-!p1@OSR1!1.13!33.89!OSR1;;chr11:120107344..120107351,+!p1@POU2F3!1.13!15.27!POU2F3;;chr8:60031619..60031676,-!p1@TOX!1.12!26.57!TOX;;chr6:10412392..10412409,-!p4@TFAP2A!1.10!13.18!TFAP2A;;chr17:46675558..46675577,-!p2@HOXB6!1.10!11.51!HOXB6;;chr1:151032922..151032951,+!p2@MLLT11!1.09!19.04!MLLT11;;chrY:21906594..21906622,-!p1@KDM5D!1.07!10.77!KDM5D;;chr17:17726907..17726958,-!p2@SREBF1!1.06!65.80!SREBF1;;chr8:60031840..60031869,-!p5@TOX!1.06!10.36!TOX;;chr8:60031762..60031803,-!p3@TOX!1.05!14.96!TOX;;chr9:16705069..16705086,-!p3@BNC2!1.05!10.25!BNC2;;chr3:147127142..147127168,+!p1@ZIC1!1.03!9.62!ZIC1;;chr7:27212501..27212513,-!p5@HOXA10!1.02!9.52!HOXA10;;chr15:37392724..37392757,-!p1@MEIS2!1.00!42.15!MEIS2;;chr10:28032421..28032494,-!p2@MKX!1.00!9.00!MKX;;chr3:147127177..147127194,+!p2@ZIC1!0.99!8.79!ZIC1;;chr8:11561684..11561751,+!p1@GATA4!0.98!8.58!GATA4;;chr11:46299199..46299233,+!p1@CREB3L1!0.97!44.46!CREB3L1;;chr21:36421535..36421610,-!p2@RUNX1!0.97!30.23!RUNX1;;chr17:46692624..46692659,-!p3@HOXB8!0.97!8.37!HOXB8;;chr10:28034395..28034404,-!p9@MKX!0.97!8.37!MKX;;chr1:170633348..170633399,+!p2@PRRX1!0.96!11.30!PRRX1;;chr22:19748231..19748317,+!p1@TBX1!0.96!8.16!TBX1;;chr17:46690839..46690884,-!p1@HOXB8!0.96!8.16!HOXB8;;chr3:69915385..69915438,+!p3@MITF!0.95!7.85!MITF;;chr1:151032142..151032195,+!p5@MLLT11!0.94!15.17!MLLT11;;chr13:100634031..100634045,+!p1@ZIC2!0.94!7.64!ZIC2;;chr3:114343768..114343822,-!p1@ZBTB20!0.93!33.79!ZBTB20;;chr3:114343826..114343869,-!p4@ZBTB20!0.93!15.27!ZBTB20;;chr2:176969124..176969155,+!p5@HOXD11!0.91!7.11!HOXD11;;chr17:46692287..46692317,-!p7@HOXB8!0.91!7.11!HOXB8;;chr1:170633262..170633285,+!p3@PRRX1!0.90!8.05!PRRX1;;chr2:200323414..200323455,-!p1@SATB2!0.87!14.23!SATB2;;chr2:5832508..5832524,+!p1@SOX11!0.87!6.38!SOX11;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.86!66.00!GLIS2;;chr15:37392534..37392562,-!p10@MEIS2!0.85!6.69!MEIS2;;chr9:126774018..126774055,+!p1@LHX2!0.85!6.07!LHX2;;chr7:26191809..26191890,+!p1@NFE2L3!0.84!30.96!NFE2L3;;chr7:19157248..19157268,-!p1@TWIST1!0.84!17.47!TWIST1;;chr17:46622070..46622109,-!p1@HOXB2!0.84!13.91!HOXB2;;chr19:31840130..31840160,-!p2@TSHZ3!0.84!9.41!TSHZ3;;chr17:46622205..46622218,-!p3@HOXB2!0.84!7.01!HOXB2;;chr17:46667628..46667642,-!p2@HOXB3!0.84!5.86!HOXB3;;chr7:1577899..1577943,+!p3@MAFK!0.84!5.86!MAFK;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.84!5.86!HOXC5;;chr15:42749722..42749739,-!p2@ZFP106!0.82!10.46!ZFP106;;chr20:62680984..62680999,-!p1@SOX18!0.82!7.64!SOX18;;chr7:28220198..28220269,-!p2@JAZF1!0.81!52.41!JAZF1;;chr5:133450365..133450444,+!p1@TCF7!0.81!26.88!TCF7;;chr11:65667884..65667895,-!p2@FOSL1!0.81!22.59!FOSL1;;chrY:2803415..2803468,+!p1@ZFY!0.81!5.44!ZFY;;chr12:124873852..124873881,-!p3@NCOR2!0.80!34.73!NCOR2;;chr17:46622114..46622138,-!p4@HOXB2!0.79!8.16!HOXB2;;chr17:46688334..46688385,-!p1@HOXB7!0.79!7.74!HOXB7;;chr3:157823517..157823562,-!p1@SHOX2!0.79!5.65!SHOX2;;chr11:46299539..46299620,+!p2@CREB3L1!0.78!8.89!CREB3L1;;chr2:200322654..200322707,-!p2@SATB2!0.78!7.64!SATB2;;chr12:54380404..54380433,+!p3@HOXC10!0.77!4.92!HOXC10;;chr20:42295745..42295765,+!p1@MYBL2!0.76!85.25!MYBL2;;chr15:37392593..37392607,-!p13@MEIS2!0.76!5.86!MEIS2;;chr16:51185172..51185197,-!p1@SALL1!0.76!4.81!SALL1;;chr3:147111198..147111225,+!p4@ZIC1!0.76!4.81!ZIC1;;chr3:69915369..69915381,+!p4@MITF!0.76!4.71!MITF;;chr1:151032782..151032801,+!p4@MLLT11!0.75!9.94!MLLT11;;chr10:64134120..64134183,+!p1@ZNF365!0.75!5.65!ZNF365;;chr1:3569072..3569093,+!p1@TP73!0.75!4.60!TP73;;chr15:37392703..37392717,-!p8@MEIS2!0.74!6.69!MEIS2;;chr1:151032739..151032748,+!p6@MLLT11!0.74!5.86!MLLT11;;chr12:54332608..54332636,+!p1@HOXC13!0.74!4.50!HOXC13;;chr7:28725740..28725778,+!p1@CREB5!0.73!43.20!CREB5;;chr19:13134457..13134462,+!p5@NFIX!0.73!8.37!NFIX;;chr19:49864746..49864780,-!p2@TEAD2!0.73!6.28!TEAD2;;chr3:69811882..69811898,+!p6@MITF!0.73!4.39!MITF;;chr5:134369879..134369898,-!p2@PITX1!0.73!4.39!PITX1;;chr5:172662197..172662216,-!p1@NKX2-5!0.73!4.39!NKX2-5;;chr15:37391588..37391604,-!p11@MEIS2!0.72!5.65!MEIS2;;chr15:37392576..37392589,-!p12@MEIS2!0.72!5.23!MEIS2;;chr1:197886421..197886432,+!p2@LHX9!0.72!4.29!LHX9;;chr20:42295713..42295738,+!p2@MYBL2!0.71!27.20!MYBL2;;chr2:121493425..121493474,+!p1@GLI2!0.71!9.73!GLI2;;chr17:46687959..46688007,-!p2@HOXB7!0.71!5.96!HOXB7;;chr18:53068911..53068935,-!p4@TCF4!0.71!4.71!TCF4;;chr2:66662510..66662521,+!p6@MEIS1!0.71!4.08!MEIS1;;chr10:102505493..102505546,+!p2@PAX2!0.71!4.08!PAX2;;chr13:100634130..100634143,+!p3@ZIC2!0.71!4.08!ZIC2;;chr17:70117153..70117174,+!p1@SOX9!0.70!46.55!SOX9;;chr1:247171316..247171336,-!p3@ZNF695!0.70!6.28!ZNF695;;chr12:77459306..77459365,-!p1@E2F7!0.69!55.96!E2F7;;chr12:125002827..125002855,-!p5@NCOR2!0.69!5.86!NCOR2;;chr17:46622229..46622257,-!p6@HOXB2!0.69!4.71!HOXB2;;chr9:4300050..4300118,-!p1@GLIS3!0.68!27.82!GLIS3;;chr17:46692603..46692621,-!p6@HOXB8!0.68!3.77!HOXB8;;chr1:170632250..170632277,+!p7@PRRX1!0.67!3.66!PRRX1;;chr22:22874610..22874616,-!p1@ZNF280A!0.67!3.66!ZNF280A;;chr17:41277372..41277418,-!p1@BRCA1!0.66!14.75!BRCA1;;chr3:107244229..107244254,+!p3@BBX!0.66!6.38!BBX;;chr3:181429704..181429722,+!p1@SOX2!0.66!3.56!SOX2;;chr6:10412576..10412599,-!p5@TFAP2A!0.66!3.56!TFAP2A;;chr19:21264991..21265026,+!p1@ZNF714!0.65!26.57!ZNF714;;chr8:67525443..67525459,-!p2@MYBL1!0.65!5.54!MYBL1;;chr14:33408072..33408114,+!p2@NPAS3!0.65!4.18!NPAS3;;chr13:100623375..100623425,-!p1@ZIC5!0.65!3.45!ZIC5;;chr17:7590797..7590815,-!p1@TP53!0.64!172.39!TP53;;chr5:176738887..176738934,-!p1@MXD3!0.64!26.05!MXD3;;chr9:130954041..130954121,-!p2@CIZ1!0.64!16.84!CIZ1;;chr12:54393880..54393962,+!p1@HOXC9!0.64!3.35!HOXC9;;chr17:46667561..46667572,-!p4@HOXB3!0.64!3.35!HOXB3;;chr7:77428149..77428220,+!p1@PHTF2!0.63!39.33!PHTF2;;chr20:32274179..32274213,-!p1@E2F1!0.63!25.52!E2F1;;chr15:37392616..37392638,-!p2@MEIS2!0.63!11.82!MEIS2;;chr2:42721205..42721307,+!p4@MTA3!0.63!3.24!MTA3;;chr1:170632959..170632987,+!p4@PRRX1!0.62!3.56!PRRX1;;chr3:114343870..114343887,-!p9@ZBTB20!0.62!3.14!ZBTB20;;chr9:128509663..128509715,+!p1@PBX3!0.61!12.03!PBX3;;chr16:1429627..1429662,-!p2@UNKL!0.61!10.36!UNKL;;chr21:36259445..36259519,-!p4@RUNX1!0.61!9.83!RUNX1;;chr19:13134772..13134822,+!p2@NFIX!0.61!4.92!NFIX;;chr2:66662281..66662308,+!p1@MEIS1!0.60!11.92!MEIS1;;chr2:71127699..71127744,+!p1@VAX2!0.60!6.90!VAX2;;chr15:80696703..80696754,+!p1@ARNT2!0.60!4.18!ARNT2;;chr16:4366021..4366045,+!p@chr16:4366021..4366045,+!0.59!16.42!GLIS2;;chr5:72744594..72744609,-!p1@FOXD1!0.59!15.90!FOXD1;;chr16:29818199..29818216,+!p11@MAZ!0.59!5.23!MAZ;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.59!2.93!SEBOX;;chr18:53253323..53253359,-!p19@TCF4!0.59!2.93!TCF4;;chr6:28321971..28321995,-!p1@ZNF323!0.59!2.93!ZNF323;;chr3:52001448..52001478,-!p2@PCBP4!0.58!48.22!PCBP4;;chr12:124873357..124873401,-!p1@NCOR2!0.58!39.75!NCOR2;;chr16:69599899..69599919,+!p2@NFAT5!0.58!39.33!NFAT5;;chr17:40477163..40477183,-!p7@STAT3!0.58!2.82!STAT3;;chr14:33403881..33403924,+!p1@NPAS3!0.58!2.82!NPAS3;;chr15:37390482..37390572,-!p7@MEIS2!0.57!3.97!MEIS2;;chr10:28032548..28032559,-!p7@MKX!0.57!2.72!MKX;;chr11:19262421..19262455,-!p3@E2F8!0.57!2.72!E2F8;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.57!2.72!HOXC5;;chr9:124991204..124991246,-!p1@LHX6!0.57!2.72!LHX6;;chr2:172949484..172949522,+!p1@DLX1!0.57!2.72!DLX1;;chr3:147124307..147124336,-!p2@ZIC4!0.57!2.72!ZIC4;;chr3:52001426..52001447,-!p3@PCBP4!0.56!8.68!PCBP4;;chr3:147111231..147111281,+!p3@ZIC1!0.56!2.62!ZIC1;;chr4:111558135..111558198,-!p2@PITX2!0.56!2.62!PITX2;;chr13:100638100..100638115,+!p4@ZIC2!0.56!2.62!ZIC2;;chr16:31076332..31076388,-!p3@ZNF668!0.56!2.62!ZNF668;;chr7:27212407..27212421,-!p9@HOXA10!0.56!2.62!HOXA10;;chr1:42384532..42384603,-!p2@HIVEP3!0.56!2.62!HIVEP3;;chr19:1652555..1652568,-!p2@TCF3!0.55!12.76!TCF3;;chr19:21265028..21265052,+!p2@ZNF714!0.55!5.23!ZNF714;;chr1:197886665..197886732,+!p3@LHX9!0.55!2.51!LHX9;;chr3:157824001..157824078,-!p2@SHOX2!0.55!2.51!SHOX2;;chrY:21906761..21906810,-!p2@KDM5D!0.55!2.51!KDM5D;;chr10:105110831..105110885,-!p1@PCGF6!0.54!30.02!PCGF6;;chr19:19729477..19729542,-!p1@PBX4!0.54!6.07!PBX4;;chr16:68573640..68573660,+!p3@ZFP90!0.54!3.56!ZFP90;;chr17:41623692..41623715,-!p1@ETV4!0.53!12.76!ETV4;;chr12:80084167..80084197,-!p5@PAWR!0.53!6.69!PAWR;;chr3:69811858..69811881,+!p5@MITF!0.53!2.41!MITF;;chr6:31126291..31126399,+!p1@TCF19!0.52!28.45!TCF19;;chr19:38720294..38720348,-!p1@DPF1!0.52!3.03!DPF1;;chr7:27239703..27239715,-!p1@HOXA13!0.52!2.30!HOXA13;;chr2:176994408..176994492,+!p1@HOXD8!0.52!2.30!HOXD8;;chr19:3366570..3366619,+!p1@NFIC!0.51!93.31!NFIC;;chr7:19157043..19157088,-!p2@TWIST1!0.51!6.80!TWIST1;;chr9:99180617..99180658,-!p1@ZNF367!0.51!5.75!ZNF367;;chr7:64023410..64023428,-!p2@ZNF680!0.51!3.97!ZNF680;;chr21:36260980..36261011,-!p1@RUNX1!0.50!82.22!RUNX1;;chr11:65667846..65667868,-!p1@FOSL1!0.50!76.26!FOSL1;;chr19:6110474..61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|sample_donor(cell lot)=
|ffid_belonging_in_development=CL:0000133,CL:0000339,CL:0000221,UBERON:0002532,UBERON:0006601,UBERON:0006238,UBERON:0010316
|sample_sex=unknown
|sample_age=unknown
|sample_ethnicity=unknown
|rna_rin=
|rna_od260/230=1.62
|rna_od260/280=2.11
|sample_cell_type=glioblast
|sample_cell_line=A172
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_experimental_condition=
|sample_disease=glioblastoma
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=37.17625
|rna_concentration=1.48705
|sample_note=
|profile_hcage=CNhs11248,LSID757,release008,COMPLETED
|profile_cagescan=NCig10059,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000030,CL:0000055,CL:0000095,CL:0000123,CL:0000125,CL:0000126,CL:0000127,CL:0000128,CL:0000133,CL:0000144,CL:0000219,CL:0000220,CL:0000221,CL:0000243,CL:0000255,CL:0000333,CL:0000339,CL:0000548,CL:0002319,CL:0002321,CL:0002371,CL:0002453
|ancestors_in_anatomy_facet=UBERON:0000033,UBERON:0000061,UBERON:0000073,UBERON:0000153,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000955,UBERON:0001016,UBERON:0001017,UBERON:0001062,UBERON:0002050,UBERON:0002532,UBERON:0004121,UBERON:0005423,UBERON:0005743
|ancestors_in_disease_facet=DOID:0050686,DOID:14566,DOID:162,DOID:3093,DOID:4
|sample_description=
|fonse_cell_line=FF:0100255
|fonse_cell_line=FF:0100255
|fonse_cell_line_closure=FF:0100255
|fonse_cell_line_closure=FF:0100255
Line 66: Line 42:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|comment=
|created_by=
|creation_date=
|def=
|has_quality=
|has_quality=
|is_a=EFO:0002091;;FF:0000003;;FF:0000210;;FF:0100016
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/glioblastoma%2520cell%2520line%253aA172%252c%2520tech_rep2.CNhs11248.10444-106F3.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/glioblastoma%2520cell%2520line%253aA172%252c%2520tech_rep2.CNhs11248.10444-106F3.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/glioblastoma%2520cell%2520line%253aA172%252c%2520tech_rep2.CNhs11248.10444-106F3.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/glioblastoma%2520cell%2520line%253aA172%252c%2520tech_rep2.CNhs11248.10444-106F3.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/glioblastoma%2520cell%2520line%253aA172%252c%2520tech_rep2.CNhs11248.10444-106F3.hg38.nobarcode.ctss.bed.gz
|id=FF:10444-106F3
|is_a=EFO:0002091;;FF:0000210;;FF:0100016
|is_obsolete=
|library_id=CNhs11248!CNhs11185
|library_id_phase_based=2:CNhs11248
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10444
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10444
|name=glioblastoma cell line:A172
|namespace=FANTOM5
|namespace=FANTOM5
|part_of=
|part_of=
|profile_cagescan=NCig10059,,,
|profile_hcage=CNhs11248 & CNhs11185,LSID757,release008,COMPLETED
|profile_rnaseq=
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|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=106
|rna_catalog_number=
|rna_concentration=1.48705
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=1.62
|rna_od260/280=2.11
|rna_position=F3
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=106F3
|rna_weight_ug=37.17625
|sample_age=unknown
|sample_category=cell lines
|sample_cell_catalog=RCB2530
|sample_cell_line=A172
|sample_cell_lot=
|sample_cell_type=glioblast
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_company=RIKEN Bioresource centre
|sample_description=
|sample_dev_stage=
|sample_disease=glioblastoma
|sample_donor(cell lot)=
|sample_ethnicity=unknown
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;6.68176541496784e-250!GO:0043226;organelle;6.80147421639275e-204!GO:0043229;intracellular organelle;2.16007870712468e-203!GO:0043231;intracellular membrane-bound organelle;1.96092540879511e-192!GO:0043227;membrane-bound organelle;2.7267530839532e-192!GO:0005737;cytoplasm;1.8000481032167e-180!GO:0044422;organelle part;4.0215791654499e-157!GO:0044446;intracellular organelle part;1.38090874600734e-155!GO:0044444;cytoplasmic part;9.76405127893327e-123!GO:0032991;macromolecular complex;2.22236451049804e-111!GO:0005515;protein binding;9.42070845453552e-88!GO:0005634;nucleus;1.14407879740805e-86!GO:0030529;ribonucleoprotein complex;3.5973898204713e-85!GO:0044428;nuclear part;9.76837470726168e-83!GO:0044238;primary metabolic process;2.38099873506112e-80!GO:0043170;macromolecule metabolic process;4.10910378822318e-80!GO:0044237;cellular metabolic process;8.78137242534347e-80!GO:0003723;RNA binding;3.70502921155095e-73!GO:0043233;organelle lumen;4.43945880975201e-71!GO:0031974;membrane-enclosed lumen;4.43945880975201e-71!GO:0043234;protein complex;2.34229088235189e-59!GO:0016043;cellular component organization and biogenesis;9.3176509388943e-59!GO:0005739;mitochondrion;2.28112925089308e-53!GO:0006396;RNA processing;3.57198770791057e-49!GO:0043283;biopolymer metabolic process;5.59122361390724e-49!GO:0019538;protein metabolic process;1.38435659093843e-48!GO:0005840;ribosome;2.07049360967735e-48!GO:0031981;nuclear lumen;3.68397021780715e-47!GO:0043228;non-membrane-bound organelle;3.22331468821873e-46!GO:0043232;intracellular non-membrane-bound organelle;3.22331468821873e-46!GO:0031090;organelle membrane;5.54786930024609e-46!GO:0006412;translation;1.30480752573186e-44!GO:0033036;macromolecule localization;6.43279208439499e-44!GO:0044260;cellular macromolecule metabolic process;2.50198753039799e-43!GO:0044267;cellular protein metabolic process;5.25566938613363e-43!GO:0015031;protein transport;1.58620111643272e-42!GO:0003735;structural constituent of ribosome;4.72405860964698e-42!GO:0016071;mRNA metabolic process;3.16712569516306e-40!GO:0031975;envelope;7.49590057725178e-40!GO:0031967;organelle envelope;8.28306475392206e-40!GO:0008104;protein localization;9.37811822235701e-40!GO:0006996;organelle organization and biogenesis;1.37015754558342e-39!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.51865871484751e-39!GO:0045184;establishment of protein localization;6.36843660593463e-39!GO:0046907;intracellular transport;2.00311618923919e-38!GO:0010467;gene expression;2.9045075524329e-38!GO:0006259;DNA metabolic process;3.56627386692038e-38!GO:0008380;RNA splicing;1.4678095502907e-37!GO:0044429;mitochondrial part;6.48929169467744e-37!GO:0005829;cytosol;2.08485490639354e-36!GO:0006397;mRNA processing;5.96078109639288e-36!GO:0033279;ribosomal subunit;1.4301676874267e-35!GO:0009059;macromolecule biosynthetic process;2.04327851830304e-32!GO:0009058;biosynthetic process;6.31057768342999e-32!GO:0065003;macromolecular complex assembly;1.37604625312798e-31!GO:0005654;nucleoplasm;2.84326912692801e-31!GO:0044249;cellular biosynthetic process;4.00383718786278e-31!GO:0000166;nucleotide binding;5.63557472768063e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;6.21014756494433e-29!GO:0022607;cellular component assembly;1.71229932611519e-28!GO:0007049;cell cycle;2.04019161011433e-28!GO:0006886;intracellular protein transport;1.15996076614495e-27!GO:0005681;spliceosome;1.09482530482873e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);5.19447512066197e-26!GO:0051649;establishment of cellular localization;7.10139348149687e-26!GO:0051641;cellular localization;8.69140687487214e-26!GO:0044451;nucleoplasm part;4.9787744008163e-25!GO:0005740;mitochondrial envelope;9.30978514255769e-25!GO:0016462;pyrophosphatase activity;1.2589992478048e-24!GO:0017111;nucleoside-triphosphatase activity;1.53504702364429e-24!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.56934674776114e-24!GO:0016817;hydrolase activity, acting on acid anhydrides;2.29118638107744e-24!GO:0003676;nucleic acid binding;4.76344744434914e-24!GO:0031966;mitochondrial membrane;1.81708436821605e-23!GO:0019866;organelle inner membrane;2.7118150042436e-23!GO:0044445;cytosolic part;2.3431365546004e-22!GO:0006974;response to DNA damage stimulus;1.6345201977585e-21!GO:0006119;oxidative phosphorylation;3.02031879296121e-21!GO:0032553;ribonucleotide binding;4.07695250700136e-21!GO:0032555;purine ribonucleotide binding;4.07695250700136e-21!GO:0005743;mitochondrial inner membrane;5.05052954427877e-21!GO:0000278;mitotic cell cycle;2.22922303323193e-20!GO:0012505;endomembrane system;4.33914663044533e-20!GO:0017076;purine nucleotide binding;7.07103809065383e-20!GO:0005694;chromosome;1.148259592658e-19!GO:0022402;cell cycle process;1.4557660058255e-19!GO:0006512;ubiquitin cycle;3.3309927155487e-19!GO:0015935;small ribosomal subunit;3.8551583779894e-19!GO:0006281;DNA repair;5.70824189366548e-19!GO:0006457;protein folding;1.24783522012262e-18!GO:0022618;protein-RNA complex assembly;1.62344100490196e-18!GO:0051301;cell division;3.26664788131772e-18!GO:0044455;mitochondrial membrane part;3.58054631250479e-18!GO:0044427;chromosomal part;8.1781066754442e-18!GO:0005524;ATP binding;1.66744823114798e-17!GO:0015934;large ribosomal subunit;1.66744823114798e-17!GO:0051276;chromosome organization and biogenesis;1.67130798624697e-17!GO:0000502;proteasome complex (sensu Eukaryota);2.81460391678767e-17!GO:0000087;M phase of mitotic cell cycle;3.15223041814442e-17!GO:0032559;adenyl ribonucleotide binding;3.5618394592061e-17!GO:0048770;pigment granule;3.92717087227661e-17!GO:0042470;melanosome;3.92717087227661e-17!GO:0007067;mitosis;6.28715442286302e-17!GO:0044265;cellular macromolecule catabolic process;1.99864981198676e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;2.81262069041336e-16!GO:0006260;DNA replication;2.92638356082692e-16!GO:0005730;nucleolus;3.32165509039115e-16!GO:0016070;RNA metabolic process;3.40952317175121e-16!GO:0008134;transcription factor binding;4.70403825945074e-16!GO:0005783;endoplasmic reticulum;4.93559071729907e-16!GO:0044257;cellular protein catabolic process;5.0287697519873e-16!GO:0019941;modification-dependent protein catabolic process;5.90348446003629e-16!GO:0043632;modification-dependent macromolecule catabolic process;5.90348446003629e-16!GO:0016874;ligase activity;5.91814025716823e-16!GO:0006511;ubiquitin-dependent protein catabolic process;5.92091397113997e-16!GO:0030554;adenyl nucleotide binding;7.71616278966434e-16!GO:0005794;Golgi apparatus;8.78760404092678e-16!GO:0043285;biopolymer catabolic process;8.840402915436e-16!GO:0005635;nuclear envelope;9.47259739590281e-16!GO:0005746;mitochondrial respiratory chain;1.20535016654166e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.11062620247926e-15!GO:0043412;biopolymer modification;2.49346634205755e-15!GO:0022403;cell cycle phase;6.16474843264516e-15!GO:0048193;Golgi vesicle transport;7.82933117008542e-15!GO:0008135;translation factor activity, nucleic acid binding;8.16710487338612e-15!GO:0015630;microtubule cytoskeleton;1.20705262590684e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.27266834224501e-14!GO:0003954;NADH dehydrogenase activity;1.27266834224501e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.27266834224501e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;1.54550162625761e-14!GO:0000375;RNA splicing, via transesterification reactions;1.54550162625761e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.54550162625761e-14!GO:0031980;mitochondrial lumen;2.07496846645498e-14!GO:0005759;mitochondrial matrix;2.07496846645498e-14!GO:0009057;macromolecule catabolic process;2.33863372991905e-14!GO:0016887;ATPase activity;3.92563496835194e-14!GO:0030163;protein catabolic process;3.92563496835194e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.06835460840135e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;5.43369722990201e-14!GO:0016192;vesicle-mediated transport;5.49444857311857e-14!GO:0044432;endoplasmic reticulum part;5.96046338206895e-14!GO:0031965;nuclear membrane;6.26403144080167e-14!GO:0005761;mitochondrial ribosome;7.05835749850006e-14!GO:0000313;organellar ribosome;7.05835749850006e-14!GO:0042623;ATPase activity, coupled;1.17806916648013e-13!GO:0006464;protein modification process;1.57353875373599e-13!GO:0051082;unfolded protein binding;1.83333339175297e-13!GO:0009719;response to endogenous stimulus;2.11909397959677e-13!GO:0006323;DNA packaging;2.39141697816194e-13!GO:0044453;nuclear membrane part;2.90298620377076e-13!GO:0042775;organelle ATP synthesis coupled electron transport;4.71186559205295e-13!GO:0042773;ATP synthesis coupled electron transport;4.71186559205295e-13!GO:0000279;M phase;5.52376293579897e-13!GO:0016604;nuclear body;6.36441242436513e-13!GO:0030964;NADH dehydrogenase complex (quinone);7.64182547902247e-13!GO:0045271;respiratory chain complex I;7.64182547902247e-13!GO:0005747;mitochondrial respiratory chain complex I;7.64182547902247e-13!GO:0006605;protein targeting;1.01519509395683e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.00074292760493e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.38010887012645e-12!GO:0004386;helicase activity;2.48475719551366e-12!GO:0043687;post-translational protein modification;1.10176481487873e-11!GO:0051186;cofactor metabolic process;2.0523487899925e-11!GO:0042254;ribosome biogenesis and assembly;2.47800225560896e-11!GO:0003743;translation initiation factor activity;3.51871895732775e-11!GO:0003712;transcription cofactor activity;3.57604215173769e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.62416814630027e-11!GO:0044248;cellular catabolic process;3.72780667715415e-11!GO:0006413;translational initiation;5.20606002624852e-11!GO:0006366;transcription from RNA polymerase II promoter;8.4693411909599e-11!GO:0006913;nucleocytoplasmic transport;1.61057364311972e-10!GO:0008026;ATP-dependent helicase activity;2.05807253348508e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.0815263600741e-10!GO:0016607;nuclear speck;2.09266024088566e-10!GO:0016568;chromatin modification;2.13076676329783e-10!GO:0005643;nuclear pore;2.31660029843884e-10!GO:0008639;small protein conjugating enzyme activity;3.16119124843236e-10!GO:0051169;nuclear transport;4.45187227118257e-10!GO:0006403;RNA localization;5.50821627695618e-10!GO:0050657;nucleic acid transport;6.48771254570721e-10!GO:0051236;establishment of RNA localization;6.48771254570721e-10!GO:0050658;RNA transport;6.48771254570721e-10!GO:0004842;ubiquitin-protein ligase activity;8.11900771493475e-10!GO:0005789;endoplasmic reticulum membrane;8.6581465057035e-10!GO:0019787;small conjugating protein ligase activity;1.10871200021657e-09!GO:0051726;regulation of cell cycle;1.27133028719451e-09!GO:0000074;regulation of progression through cell cycle;1.61131322412821e-09!GO:0000785;chromatin;1.62728754428217e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.68252060995716e-09!GO:0008565;protein transporter activity;1.68252060995716e-09!GO:0005819;spindle;1.72940309810664e-09!GO:0006446;regulation of translational initiation;2.38926680896284e-09!GO:0006333;chromatin assembly or disassembly;4.06696500642531e-09!GO:0006461;protein complex assembly;4.2557744699051e-09!GO:0065002;intracellular protein transport across a membrane;5.52433089329057e-09!GO:0006399;tRNA metabolic process;5.84553008790992e-09!GO:0006732;coenzyme metabolic process;7.12944990642324e-09!GO:0043566;structure-specific DNA binding;9.64665455747966e-09!GO:0003697;single-stranded DNA binding;1.00549057845557e-08!GO:0009259;ribonucleotide metabolic process;1.29128751617862e-08!GO:0046930;pore complex;1.75180069849863e-08!GO:0012501;programmed cell death;1.86646327559332e-08!GO:0065004;protein-DNA complex assembly;2.03593988651705e-08!GO:0005793;ER-Golgi intermediate compartment;2.08775127733042e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.41476728556951e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.5027578590063e-08!GO:0006915;apoptosis;3.37925145196191e-08!GO:0003924;GTPase activity;3.63506603773498e-08!GO:0016881;acid-amino acid ligase activity;4.24301408971139e-08!GO:0051028;mRNA transport;5.11252129313459e-08!GO:0006163;purine nucleotide metabolic process;6.2667885451531e-08!GO:0000775;chromosome, pericentric region;6.2667885451531e-08!GO:0009150;purine ribonucleotide metabolic process;6.91575744270523e-08!GO:0006364;rRNA processing;8.37106210353641e-08!GO:0005813;centrosome;8.64036927960451e-08!GO:0015986;ATP synthesis coupled proton transport;9.7401570678404e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.7401570678404e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.09843984057297e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.10217550585804e-07!GO:0005815;microtubule organizing center;1.10217550585804e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.15267906793115e-07!GO:0000245;spliceosome assembly;1.46677542056243e-07!GO:0048523;negative regulation of cellular process;1.47327718194795e-07!GO:0050794;regulation of cellular process;1.51652974818264e-07!GO:0016072;rRNA metabolic process;1.56872491499091e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.58472774654941e-07!GO:0004812;aminoacyl-tRNA ligase activity;1.58472774654941e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.58472774654941e-07!GO:0009260;ribonucleotide biosynthetic process;1.64205766913745e-07!GO:0009055;electron carrier activity;2.09748034739667e-07!GO:0030120;vesicle coat;2.1088932895409e-07!GO:0030662;coated vesicle membrane;2.1088932895409e-07!GO:0006164;purine nucleotide biosynthetic process;2.27598130135791e-07!GO:0009152;purine ribonucleotide biosynthetic process;2.42587427000149e-07!GO:0043038;amino acid activation;2.63929113688793e-07!GO:0006418;tRNA aminoacylation for protein translation;2.63929113688793e-07!GO:0043039;tRNA aminoacylation;2.63929113688793e-07!GO:0008219;cell death;2.63929113688793e-07!GO:0016265;death;2.63929113688793e-07!GO:0019829;cation-transporting ATPase activity;2.67489162622679e-07!GO:0009199;ribonucleoside triphosphate metabolic process;2.80360381661707e-07!GO:0048475;coated membrane;3.2300505701042e-07!GO:0030117;membrane coat;3.2300505701042e-07!GO:0044431;Golgi apparatus part;3.69982038787964e-07!GO:0009141;nucleoside triphosphate metabolic process;3.72944037475554e-07!GO:0005667;transcription factor complex;3.80868810757832e-07!GO:0007051;spindle organization and biogenesis;3.87583812678588e-07!GO:0009060;aerobic respiration;3.88076458363509e-07!GO:0005839;proteasome core complex (sensu Eukaryota);3.95559351179019e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.35472092592075e-07!GO:0009144;purine nucleoside triphosphate metabolic process;4.35472092592075e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.53123174563214e-07!GO:0007010;cytoskeleton organization and biogenesis;4.88647207811685e-07!GO:0005874;microtubule;5.08208698139667e-07!GO:0009142;nucleoside triphosphate biosynthetic process;5.3221487019262e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.3221487019262e-07!GO:0032446;protein modification by small protein conjugation;5.84862473585936e-07!GO:0006261;DNA-dependent DNA replication;5.84862473585936e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;8.41236041492059e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;8.41236041492059e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;9.29050553935592e-07!GO:0017038;protein import;9.42124210889394e-07!GO:0005768;endosome;9.78338317733894e-07!GO:0046034;ATP metabolic process;9.80611971633771e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.03885088239435e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.10804545394955e-06!GO:0016779;nucleotidyltransferase activity;1.12338603235689e-06!GO:0045333;cellular respiration;1.27751970451681e-06!GO:0016563;transcription activator activity;1.3440189531226e-06!GO:0006754;ATP biosynthetic process;1.46346998968731e-06!GO:0006753;nucleoside phosphate metabolic process;1.46346998968731e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.54876844393013e-06!GO:0016567;protein ubiquitination;1.60142067689452e-06!GO:0000151;ubiquitin ligase complex;1.97165737951204e-06!GO:0051188;cofactor biosynthetic process;2.26719128756428e-06!GO:0006099;tricarboxylic acid cycle;2.2697374822517e-06!GO:0046356;acetyl-CoA catabolic process;2.2697374822517e-06!GO:0016740;transferase activity;2.5029178826189e-06!GO:0004298;threonine endopeptidase activity;2.52376827613705e-06!GO:0048519;negative regulation of biological process;3.03463998825532e-06!GO:0051246;regulation of protein metabolic process;3.11506133186882e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.20578493307106e-06!GO:0007005;mitochondrion organization and biogenesis;3.23180892938771e-06!GO:0005525;GTP binding;3.3458188981106e-06!GO:0031252;leading edge;3.4277908219951e-06!GO:0016787;hydrolase activity;3.4277908219951e-06!GO:0009056;catabolic process;4.45264798183608e-06!GO:0005788;endoplasmic reticulum lumen;5.13685350279494e-06!GO:0006793;phosphorus metabolic process;5.38007666304589e-06!GO:0006796;phosphate metabolic process;5.38007666304589e-06!GO:0045259;proton-transporting ATP synthase complex;6.48173488258974e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;6.51676907090045e-06!GO:0003724;RNA helicase activity;6.94007006023395e-06!GO:0006084;acetyl-CoA metabolic process;7.17761893007333e-06!GO:0031988;membrane-bound vesicle;7.215097118454e-06!GO:0016023;cytoplasmic membrane-bound vesicle;8.34886014025873e-06!GO:0003713;transcription coactivator activity;8.34886014025873e-06!GO:0031497;chromatin assembly;1.1029331090335e-05!GO:0006334;nucleosome assembly;1.14806731187489e-05!GO:0031324;negative regulation of cellular metabolic process;1.15391147026453e-05!GO:0003714;transcription corepressor activity;1.21696580034071e-05!GO:0051187;cofactor catabolic process;1.22036679796382e-05!GO:0005798;Golgi-associated vesicle;1.22748517534491e-05!GO:0006613;cotranslational protein targeting to membrane;1.26290816273155e-05!GO:0009117;nucleotide metabolic process;1.27689182004883e-05!GO:0031982;vesicle;1.42028449984528e-05!GO:0005657;replication fork;1.42028449984528e-05!GO:0003682;chromatin binding;1.4358537725455e-05!GO:0043623;cellular protein complex assembly;1.61599373952992e-05!GO:0031410;cytoplasmic vesicle;2.07430011857301e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.33487781077309e-05!GO:0051329;interphase of mitotic cell cycle;2.37444745423481e-05!GO:0016310;phosphorylation;2.37444745423481e-05!GO:0007017;microtubule-based process;2.71308782380264e-05!GO:0051168;nuclear export;2.76264812367573e-05!GO:0009109;coenzyme catabolic process;2.91317908194464e-05!GO:0050789;regulation of biological process;3.00999136130694e-05!GO:0016564;transcription repressor activity;3.1952068899769e-05!GO:0009108;coenzyme biosynthetic process;3.99958516249104e-05!GO:0000139;Golgi membrane;4.02182455029853e-05!GO:0030867;rough endoplasmic reticulum membrane;4.13230254623186e-05!GO:0006752;group transfer coenzyme metabolic process;4.19519707646979e-05!GO:0051325;interphase;4.76023699484533e-05!GO:0043021;ribonucleoprotein binding;4.99155398113463e-05!GO:0043067;regulation of programmed cell death;5.13775457841565e-05!GO:0009892;negative regulation of metabolic process;5.35892010013688e-05!GO:0008654;phospholipid biosynthetic process;5.51811729766531e-05!GO:0042981;regulation of apoptosis;5.55026557013408e-05!GO:0032561;guanyl ribonucleotide binding;5.7275073059516e-05!GO:0019001;guanyl nucleotide binding;5.7275073059516e-05!GO:0003684;damaged DNA binding;5.77338347059118e-05!GO:0003729;mRNA binding;6.92123210957195e-05!GO:0051170;nuclear import;7.02758440969296e-05!GO:0000776;kinetochore;7.85233272793835e-05!GO:0006606;protein import into nucleus;9.06840085595054e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;9.29445297324649e-05!GO:0005762;mitochondrial large ribosomal subunit;9.35214030512335e-05!GO:0000315;organellar large ribosomal subunit;9.35214030512335e-05!GO:0008094;DNA-dependent ATPase activity;9.6383317848804e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;9.87213914316556e-05!GO:0043069;negative regulation of programmed cell death;0.000100457099188759!GO:0051427;hormone receptor binding;0.000101502528948871!GO:0016363;nuclear matrix;0.000102404699324165!GO:0003690;double-stranded DNA binding;0.000102654440210862!GO:0006302;double-strand break repair;0.000105155339580016!GO:0044440;endosomal part;0.000106649263207141!GO:0010008;endosome membrane;0.000106649263207141!GO:0016481;negative regulation of transcription;0.000142457568426883!GO:0005773;vacuole;0.000142822828365823!GO:0015980;energy derivation by oxidation of organic compounds;0.000154385616123333!GO:0008186;RNA-dependent ATPase activity;0.000163437478647029!GO:0008092;cytoskeletal protein binding;0.000170726031157374!GO:0051052;regulation of DNA metabolic process;0.000179654146072523!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000190516434405677!GO:0019899;enzyme binding;0.000200055770037573!GO:0043066;negative regulation of apoptosis;0.000207897893982147!GO:0005905;coated pit;0.000210427889321692!GO:0033116;ER-Golgi intermediate compartment membrane;0.000213248198953232!GO:0000075;cell cycle checkpoint;0.000215313559993311!GO:0035257;nuclear hormone receptor binding;0.000219493287626157!GO:0005769;early endosome;0.000223669668405577!GO:0007059;chromosome segregation;0.000225303702915901!GO:0003899;DNA-directed RNA polymerase activity;0.000233438483743894!GO:0006414;translational elongation;0.000233438483743894!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000296440375328068!GO:0006612;protein targeting to membrane;0.000318884039514292!GO:0000314;organellar small ribosomal subunit;0.000327217874338655!GO:0005763;mitochondrial small ribosomal subunit;0.000327217874338655!GO:0005770;late endosome;0.00032845694182005!GO:0045786;negative regulation of progression through cell cycle;0.000368703858332035!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000398106248584978!GO:0004674;protein serine/threonine kinase activity;0.00043310692808477!GO:0004004;ATP-dependent RNA helicase activity;0.000465181676705246!GO:0007052;mitotic spindle organization and biogenesis;0.000490931981863204!GO:0005885;Arp2/3 protein complex;0.000500000748483942!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000545335722285677!GO:0015399;primary active transmembrane transporter activity;0.000545335722285677!GO:0006916;anti-apoptosis;0.000545335722285677!GO:0046474;glycerophospholipid biosynthetic process;0.000559676491025665!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000591414902565024!GO:0016197;endosome transport;0.000618373469369618!GO:0005876;spindle microtubule;0.000670069154985634!GO:0005856;cytoskeleton;0.000712447464734695!GO:0016044;membrane organization and biogenesis;0.000727342626554657!GO:0016859;cis-trans isomerase activity;0.000741911638435136!GO:0005048;signal sequence binding;0.000742246043958367!GO:0006310;DNA recombination;0.000757718129889888!GO:0019222;regulation of metabolic process;0.000762448480211898!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000763816974515783!GO:0008022;protein C-terminus binding;0.000788583925871936!GO:0008250;oligosaccharyl transferase complex;0.000805978383122241!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000806891594955545!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000812525817319189!GO:0003678;DNA helicase activity;0.000831545856452844!GO:0051789;response to protein stimulus;0.000884440573197406!GO:0006986;response to unfolded protein;0.000884440573197406!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000907085155502518!GO:0019843;rRNA binding;0.000914040725199517!GO:0046489;phosphoinositide biosynthetic process;0.00100045088629179!GO:0005791;rough endoplasmic reticulum;0.00102163947838603!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00106174982821243!GO:0006650;glycerophospholipid metabolic process;0.00113740769454295!GO:0006383;transcription from RNA polymerase III promoter;0.00118812143215244!GO:0006891;intra-Golgi vesicle-mediated transport;0.00122994583735011!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00123135834077636!GO:0000323;lytic vacuole;0.00126087058944991!GO:0005764;lysosome;0.00126087058944991!GO:0030663;COPI coated vesicle membrane;0.00132225737031171!GO:0030126;COPI vesicle coat;0.00132225737031171!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00134119263246645!GO:0004576;oligosaccharyl transferase activity;0.00141956830070516!GO:0007264;small GTPase mediated signal transduction;0.00146160746326633!GO:0006338;chromatin remodeling;0.001494633758218!GO:0015631;tubulin binding;0.001494633758218!GO:0043284;biopolymer biosynthetic process;0.00153334108954115!GO:0048471;perinuclear region of cytoplasm;0.00153662510534791!GO:0045454;cell redox homeostasis;0.00165265309905471!GO:0031968;organelle outer membrane;0.00169411875392271!GO:0019867;outer membrane;0.00175283665828553!GO:0006402;mRNA catabolic process;0.00190606200566154!GO:0030134;ER to Golgi transport vesicle;0.00192190930600408!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00197949997668897!GO:0000792;heterochromatin;0.00207508515435507!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00214829520722865!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00214829520722865!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00214829520722865!GO:0005637;nuclear inner membrane;0.00234653538033409!GO:0030384;phosphoinositide metabolic process;0.00234653538033409!GO:0048500;signal recognition particle;0.00235808782526582!GO:0030137;COPI-coated vesicle;0.00250018265618592!GO:0030658;transport vesicle membrane;0.00251550151873511!GO:0032508;DNA duplex unwinding;0.00254435517796322!GO:0032392;DNA geometric change;0.00254435517796322!GO:0030176;integral to endoplasmic reticulum membrane;0.00255609811321093!GO:0008361;regulation of cell size;0.00255609811321093!GO:0000059;protein import into nucleus, docking;0.00259333595370191!GO:0030127;COPII vesicle coat;0.00259333595370191!GO:0012507;ER to Golgi transport vesicle membrane;0.00259333595370191!GO:0007006;mitochondrial membrane organization and biogenesis;0.00265589806516947!GO:0043681;protein import into mitochondrion;0.00281919714942211!GO:0009165;nucleotide biosynthetic process;0.00297664041849921!GO:0044452;nucleolar part;0.00299429637767802!GO:0046467;membrane lipid biosynthetic process;0.00308822615463521!GO:0006352;transcription initiation;0.00317801287825638!GO:0030132;clathrin coat of coated pit;0.00319419334072724!GO:0015992;proton transport;0.00319419334072724!GO:0006818;hydrogen transport;0.0032440896758669!GO:0006289;nucleotide-excision repair;0.00331084077426729!GO:0031072;heat shock protein binding;0.00336083929449135!GO:0001726;ruffle;0.0033934918274488!GO:0018196;peptidyl-asparagine modification;0.00345533157256776!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00345533157256776!GO:0048522;positive regulation of cellular process;0.003580342778027!GO:0007093;mitotic cell cycle checkpoint;0.00366171854479062!GO:0007243;protein kinase cascade;0.00396034528699535!GO:0008139;nuclear localization sequence binding;0.00396812486411053!GO:0016049;cell growth;0.00410467078244715!GO:0043492;ATPase activity, coupled to movement of substances;0.00410467078244715!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00410467078244715!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00427364318729985!GO:0031124;mRNA 3'-end processing;0.00432813569626753!GO:0008033;tRNA processing;0.00433315713555893!GO:0031901;early endosome membrane;0.00438112312934164!GO:0006401;RNA catabolic process;0.00453950796767007!GO:0007088;regulation of mitosis;0.00468244702535183!GO:0006839;mitochondrial transport;0.00489029004285625!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00493361520009141!GO:0006611;protein export from nucleus;0.00504246293471471!GO:0005684;U2-dependent spliceosome;0.00509176596510995!GO:0030036;actin cytoskeleton organization and biogenesis;0.00513110206268191!GO:0017166;vinculin binding;0.00528473666647996!GO:0048487;beta-tubulin binding;0.00532432657572473!GO:0006892;post-Golgi vesicle-mediated transport;0.00536182541103183!GO:0030660;Golgi-associated vesicle membrane;0.00537188587427021!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00552906700684926!GO:0016584;nucleosome positioning;0.00554396261639835!GO:0016853;isomerase activity;0.00584703466211991!GO:0006268;DNA unwinding during replication;0.00587814717901332!GO:0043624;cellular protein complex disassembly;0.00588325658773025!GO:0006405;RNA export from nucleus;0.0059865472868562!GO:0030521;androgen receptor signaling pathway;0.00599254748295459!GO:0030880;RNA polymerase complex;0.0060476192473901!GO:0006626;protein targeting to mitochondrion;0.00619523661611429!GO:0045045;secretory pathway;0.00632527697195152!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00639016906187839!GO:0045047;protein targeting to ER;0.00639016906187839!GO:0030133;transport vesicle;0.00646797881281304!GO:0030027;lamellipodium;0.00654464133591769!GO:0006284;base-excision repair;0.00666520905885446!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00688708673170128!GO:0005875;microtubule associated complex;0.00690645264538789!GO:0005869;dynactin complex;0.00691345173942844!GO:0003702;RNA polymerase II transcription factor activity;0.00708108140546263!GO:0005741;mitochondrial outer membrane;0.00734938698106742!GO:0000922;spindle pole;0.00747037717337393!GO:0003746;translation elongation factor activity;0.00747427675173859!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00775786669789026!GO:0051252;regulation of RNA metabolic process;0.0078487772966133!GO:0030118;clathrin coat;0.00807344541751857!GO:0005862;muscle thin filament tropomyosin;0.00813892626365236!GO:0051087;chaperone binding;0.00816210378935183!GO:0016272;prefoldin complex;0.00818939259916542!GO:0043596;nuclear replication fork;0.00825849218565661!GO:0004527;exonuclease activity;0.00843263903587272!GO:0003711;transcription elongation regulator activity;0.00859359306406548!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00859359306406548!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00859359306406548!GO:0035258;steroid hormone receptor binding;0.00859359306406548!GO:0000339;RNA cap binding;0.00910019188920904!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00921391660037076!GO:0045893;positive regulation of transcription, DNA-dependent;0.00923571010562329!GO:0016491;oxidoreductase activity;0.00929509352433928!GO:0001558;regulation of cell growth;0.00943691888883651!GO:0008312;7S RNA binding;0.0094420649103031!GO:0008180;signalosome;0.00969598216060828!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00991715247429216!GO:0016251;general RNA polymerase II transcription factor activity;0.0105218559030387!GO:0006497;protein amino acid lipidation;0.0106896215549016!GO:0032984;macromolecular complex disassembly;0.0110295145566253!GO:0042393;histone binding;0.0111086991452036!GO:0045892;negative regulation of transcription, DNA-dependent;0.0111376095086272!GO:0033673;negative regulation of kinase activity;0.011151527548184!GO:0006469;negative regulation of protein kinase activity;0.011151527548184!GO:0043022;ribosome binding;0.0111695250689054!GO:0051348;negative regulation of transferase activity;0.0113768169087514!GO:0008017;microtubule binding;0.0113775127671349!GO:0030032;lamellipodium biogenesis;0.0114862367933946!GO:0000910;cytokinesis;0.0115175834662884!GO:0008168;methyltransferase activity;0.0115546049203029!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0115856270138541!GO:0000428;DNA-directed RNA polymerase complex;0.0115856270138541!GO:0006091;generation of precursor metabolites and energy;0.0116290776324826!GO:0016741;transferase activity, transferring one-carbon groups;0.0119395593341761!GO:0045941;positive regulation of transcription;0.0121096262852695!GO:0065009;regulation of a molecular function;0.0123550041181338!GO:0005832;chaperonin-containing T-complex;0.0123724114185913!GO:0030029;actin filament-based process;0.0130297610400406!GO:0005096;GTPase activator activity;0.0134946756975021!GO:0016301;kinase activity;0.0137276155455321!GO:0006595;polyamine metabolic process;0.0137276155455321!GO:0006506;GPI anchor biosynthetic process;0.0137967124189617!GO:0007030;Golgi organization and biogenesis;0.0142470995549464!GO:0000152;nuclear ubiquitin ligase complex;0.0143200163130464!GO:0032200;telomere organization and biogenesis;0.014629930134476!GO:0000723;telomere maintenance;0.014629930134476!GO:0000209;protein polyubiquitination;0.0150107983984827!GO:0008234;cysteine-type peptidase activity;0.0152920207667837!GO:0006275;regulation of DNA replication;0.0155576814028265!GO:0000781;chromosome, telomeric region;0.0155576814028265!GO:0006376;mRNA splice site selection;0.0156447605640073!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0156447605640073!GO:0008047;enzyme activator activity;0.0157932126183014!GO:0008629;induction of apoptosis by intracellular signals;0.015960339583434!GO:0030119;AP-type membrane coat adaptor complex;0.0159965099753746!GO:0000228;nuclear chromosome;0.0159997840237751!GO:0008276;protein methyltransferase activity;0.0162341841969945!GO:0000786;nucleosome;0.0162515671411203!GO:0031123;RNA 3'-end processing;0.0166640563635743!GO:0006505;GPI anchor metabolic process;0.0167096461376475!GO:0042802;identical protein binding;0.0168281877843291!GO:0043241;protein complex disassembly;0.0174652270520926!GO:0007040;lysosome organization and biogenesis;0.0174664175514625!GO:0019783;small conjugating protein-specific protease activity;0.0180282102856277!GO:0006509;membrane protein ectodomain proteolysis;0.0191275555309028!GO:0033619;membrane protein proteolysis;0.0191275555309028!GO:0031625;ubiquitin protein ligase binding;0.0197987579725887!GO:0065007;biological regulation;0.020012495297!GO:0007265;Ras protein signal transduction;0.020012495297!GO:0008287;protein serine/threonine phosphatase complex;0.020257562583818!GO:0031529;ruffle organization and biogenesis;0.0203126946666214!GO:0000082;G1/S transition of mitotic cell cycle;0.0203551485103317!GO:0051287;NAD binding;0.0204382775938176!GO:0033559;unsaturated fatty acid metabolic process;0.0207059224562347!GO:0006636;unsaturated fatty acid biosynthetic process;0.0207059224562347!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0209655088681614!GO:0006897;endocytosis;0.0209655088681614!GO:0010324;membrane invagination;0.0209655088681614!GO:0043488;regulation of mRNA stability;0.0209655088681614!GO:0043487;regulation of RNA stability;0.0209655088681614!GO:0004843;ubiquitin-specific protease activity;0.0214612579355434!GO:0030131;clathrin adaptor complex;0.0219306188614489!GO:0030659;cytoplasmic vesicle membrane;0.0222855222716657!GO:0007021;tubulin folding;0.0227269589872867!GO:0016407;acetyltransferase activity;0.0228216247565275!GO:0006672;ceramide metabolic process;0.0228598148953457!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0232984740851949!GO:0031323;regulation of cellular metabolic process;0.0234587166752399!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0237803360581114!GO:0010257;NADH dehydrogenase complex assembly;0.0237803360581114!GO:0033108;mitochondrial respiratory chain complex assembly;0.0237803360581114!GO:0042770;DNA damage response, signal transduction;0.0238979047285395!GO:0006695;cholesterol biosynthetic process;0.0240576078129045!GO:0042158;lipoprotein biosynthetic process;0.0240706559888064!GO:0050681;androgen receptor binding;0.0240706559888064!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0245737678885366!GO:0016126;sterol biosynthetic process;0.0245737678885366!GO:0000049;tRNA binding;0.0247702778098725!GO:0006740;NADPH regeneration;0.0249247630970563!GO:0006098;pentose-phosphate shunt;0.0249247630970563!GO:0044430;cytoskeletal part;0.0255669973267961!GO:0043189;H4/H2A histone acetyltransferase complex;0.02564986743224!GO:0022890;inorganic cation transmembrane transporter activity;0.0269235210526655!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.027137234122382!GO:0015002;heme-copper terminal oxidase activity;0.027137234122382!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.027137234122382!GO:0004129;cytochrome-c oxidase activity;0.027137234122382!GO:0004003;ATP-dependent DNA helicase activity;0.0271403162348024!GO:0046483;heterocycle metabolic process;0.0277072782611675!GO:0000725;recombinational repair;0.0279140238314274!GO:0000724;double-strand break repair via homologous recombination;0.0279140238314274!GO:0008601;protein phosphatase type 2A regulator activity;0.0281213404087327!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0281213404087327!GO:0004221;ubiquitin thiolesterase activity;0.0281339736703878!GO:0008538;proteasome activator activity;0.0284157430204021!GO:0044433;cytoplasmic vesicle part;0.0285609938941634!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0294231062264325!GO:0047485;protein N-terminus binding;0.0294231062264325!GO:0030496;midbody;0.0297310141267876!GO:0051539;4 iron, 4 sulfur cluster binding;0.0299505529249105!GO:0051128;regulation of cellular component organization and biogenesis;0.0302048670870557!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0304600226609544!GO:0005938;cell cortex;0.0304600226609544!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0305336777109815!GO:0040029;regulation of gene expression, epigenetic;0.0306132563985261!GO:0016569;covalent chromatin modification;0.0310756160277443!GO:0051540;metal cluster binding;0.0311799238210187!GO:0051536;iron-sulfur cluster binding;0.0311799238210187!GO:0043601;nuclear replisome;0.0311999202641343!GO:0030894;replisome;0.0311999202641343!GO:0005784;translocon complex;0.0315345220900133!GO:0007004;telomere maintenance via telomerase;0.0318021075737015!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0322949545851416!GO:0009116;nucleoside metabolic process;0.0325507914917394!GO:0043130;ubiquitin binding;0.0325507914917394!GO:0032182;small conjugating protein binding;0.0325507914917394!GO:0046966;thyroid hormone receptor binding;0.0340306685849767!GO:0051101;regulation of DNA binding;0.0342497383873632!GO:0005669;transcription factor TFIID complex;0.0353524650651732!GO:0035267;NuA4 histone acetyltransferase complex;0.0365924699387566!GO:0016790;thiolester hydrolase activity;0.0368330438173736!GO:0046519;sphingoid metabolic process;0.0371886904846757!GO:0009112;nucleobase metabolic process;0.0372993632684003!GO:0000819;sister chromatid segregation;0.0374401664211737!GO:0007033;vacuole organization and biogenesis;0.0379310391911704!GO:0006378;mRNA polyadenylation;0.0380110133493747!GO:0008610;lipid biosynthetic process;0.0381905105845087!GO:0030518;steroid hormone receptor signaling pathway;0.0383524985438116!GO:0044262;cellular carbohydrate metabolic process;0.0394077848552322!GO:0006778;porphyrin metabolic process;0.0397303459746308!GO:0033013;tetrapyrrole metabolic process;0.0397303459746308!GO:0006270;DNA replication initiation;0.0400129894427131!GO:0031371;ubiquitin conjugating enzyme complex;0.0400227458663253!GO:0004518;nuclease activity;0.0400227458663253!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0400227458663253!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0400227458663253!GO:0012506;vesicle membrane;0.0400638210419469!GO:0016311;dephosphorylation;0.0400886514976347!GO:0044454;nuclear chromosome part;0.0406280840017164!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0407906007127345!GO:0031970;organelle envelope lumen;0.0415392183456047!GO:0006144;purine base metabolic process;0.0416521417087264!GO:0030125;clathrin vesicle coat;0.0427692410540926!GO:0030665;clathrin coated vesicle membrane;0.0427692410540926!GO:0006007;glucose catabolic process;0.0431024367324532!GO:0000070;mitotic sister chromatid segregation;0.0440497418199013!GO:0032259;methylation;0.0444992648963788!GO:0005680;anaphase-promoting complex;0.045404065420105!GO:0000018;regulation of DNA recombination;0.0454855897748376!GO:0030911;TPR domain binding;0.045953673886075!GO:0042026;protein refolding;0.0462631365876467!GO:0051920;peroxiredoxin activity;0.0466601379666637!GO:0008536;Ran GTPase binding;0.0466664543287732!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0479080654181171!GO:0016791;phosphoric monoester hydrolase activity;0.0484103237932997!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.048658283486706!GO:0030695;GTPase regulator activity;0.048658283486706!GO:0000123;histone acetyltransferase complex;0.0489023774522808!GO:0051098;regulation of binding;0.0489681764337095!GO:0031902;late endosome membrane;0.0492074567827672!GO:0002102;podosome;0.049700964381411
|sample_id=10444
|sample_note=
|sample_sex=unknown
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=brain
|top_motifs=HOXA9_MEIS1:2.0308510814;TFDP1:1.44560807399;ZNF384:1.36614042134;POU3F1..4:1.25559179789;GFI1:1.09541412181;EN1,2:1.07886127724;E2F1..5:0.967869148778;ADNP_IRX_SIX_ZHX:0.952054189441;PRRX1,2:0.931765634854;ZIC1..3:0.922927369268;PITX1..3:0.888587914613;XCPE1{core}:0.881394195531;NKX3-1:0.868990008005;TLX1..3_NFIC{dimer}:0.802716541321;NRF1:0.7910783973;ZNF143:0.768209080049;NR3C1:0.754449678431;FOXD3:0.751589364447;ARID5B:0.715545644575;NKX6-1,2:0.660975253586;TEAD1:0.65553060343;NFY{A,B,C}:0.650179334209;SOX2:0.609913936407;PDX1:0.609425933543;NKX2-3_NKX2-5:0.594701126518;STAT5{A,B}:0.593419573554;RXRA_VDR{dimer}:0.590701989259;ZNF238:0.568399161521;EGR1..3:0.564417093265;HBP1_HMGB_SSRP1_UBTF:0.549603889316;SOX17:0.542425314538;MZF1:0.541425590102;PAX8:0.535867777999;AIRE:0.531134701026;GTF2A1,2:0.519452463096;PAX4:0.511173887506;GTF2I:0.495718733122;ZNF148:0.489063498472;FOXP1:0.483187887044;ELK1,4_GABP{A,B1}:0.461008643907;RFX1:0.453804666063;NFE2:0.438699540418;ALX4:0.435261396517;TLX2:0.422536756978;FOXM1:0.411709208258;OCT4_SOX2{dimer}:0.409684461156;NFE2L2:0.405630186171;EBF1:0.396847707841;ONECUT1,2:0.396174585578;BACH2:0.38565888224;GFI1B:0.37001753252;EVI1:0.34819202133;TP53:0.343779734831;ZBTB6:0.333979081191;CUX2:0.332363152851;TFAP2{A,C}:0.331354913544;TAL1_TCF{3,4,12}:0.318217691099;MYBL2:0.316271498654;NR1H4:0.310933755309;PBX1:0.310745004025;TFAP2B:0.257119779175;POU2F1..3:0.246612876637;PATZ1:0.246514686035;HIC1:0.245112576757;FOS_FOS{B,L1}_JUN{B,D}:0.228858462175;HOX{A5,B5}:0.21348235133;HSF1,2:0.206959074936;LEF1_TCF7_TCF7L1,2:0.199174380805;SP1:0.192825354775;CRX:0.185901023484;RREB1:0.181220641838;NANOG:0.180211535044;STAT1,3:0.175744416685;KLF4:0.164338893035;CDC5L:0.148642986637;PRDM1:0.140617159071;PAX5:0.130611199099;NFIX:0.125199881823;IKZF1:0.120197503694;HOX{A6,A7,B6,B7}:0.11363439129;RBPJ:0.1093573636;bHLH_family:0.108706916478;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.103776825436;TEF:0.1000939963;POU5F1:0.085957420229;LHX3,4:0.0812181152581;MYB:0.0728936171304;FOXQ1:0.0677384756117;FOSL2:0.0644909283157;EP300:0.0635807305397;FOX{I1,J2}:0.0556109948412;TBX4,5:0.0496294956253;GCM1,2:0.0252935781697;YY1:0.00785358288823;GATA4:-0.0144103114764;MEF2{A,B,C,D}:-0.0150541943603;MAZ:-0.0153335901001;CDX1,2,4:-0.0170800475802;ZFP161:-0.0191598101563;FOX{F1,F2,J1}:-0.033116065773;RXR{A,B,G}:-0.0635582853244;MTE{core}:-0.0734782786996;FOXA2:-0.0847933466878;POU1F1:-0.0961003282527;MYOD1:-0.0967704082586;NKX3-2:-0.112012812012;HNF1A:-0.118257621388;BREu{core}:-0.125436066833;PAX1,9:-0.131211589904;IRF1,2:-0.132238232741;PPARG:-0.132910553981;ELF1,2,4:-0.133399763355;IRF7:-0.140218263089;IKZF2:-0.142101911517;MED-1{core}:-0.157008827783;STAT2,4,6:-0.158073854574;NFATC1..3:-0.15962008775;DBP:-0.180337332654;SMAD1..7,9:-0.182834495893;RUNX1..3:-0.192969036119;TOPORS:-0.192987222319;NR6A1:-0.193243903967;TFCP2:-0.196320218433;DMAP1_NCOR{1,2}_SMARC:-0.20864539805;SREBF1,2:-0.213257344232;HLF:-0.216669229126;SOX{8,9,10}:-0.228112327822;ZBTB16:-0.232189307755;MYFfamily:-0.246464780575;GATA6:-0.247218309394;HOX{A4,D4}:-0.251881268046;HNF4A_NR2F1,2:-0.261781049149;PAX3,7:-0.263409909553;UFEwm:-0.265190863809;RORA:-0.271571748854;SRF:-0.277683006477;NFKB1_REL_RELA:-0.278765054559;ATF2:-0.281229261349;LMO2:-0.292335370856;ETS1,2:-0.299320028685;RFX2..5_RFXANK_RFXAP:-0.303726459801;PAX6:-0.31372852823;XBP1:-0.327174131894;FOXO1,3,4:-0.349288712364;FOXN1:-0.358508783565;SNAI1..3:-0.387231895152;REST:-0.40319522783;CEBPA,B_DDIT3:-0.405816071365;CREB1:-0.413296228401;GZF1:-0.419899109939;SPIB:-0.422731285586;VSX1,2:-0.42318298893;HMGA1,2:-0.45578221579;JUN:-0.464680084453;FOXP3:-0.492596705842;TGIF1:-0.496466722919;ATF5_CREB3:-0.504491830844;ALX1:-0.52129987078;TFAP4:-0.52503641612;SPI1:-0.529304045129;NR5A1,2:-0.586895590424;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.595174465073;ESRRA:-0.596713503804;NKX2-2,8:-0.59766547025;ATF4:-0.603733081887;SOX5:-0.6154507639;NFIL3:-0.616672524116;POU6F1:-0.621474689629;FOX{D1,D2}:-0.624958182379;NFE2L1:-0.658373806944;HAND1,2:-0.660697170104;BPTF:-0.666705976034;FOXL1:-0.706653019182;T:-0.712345062373;SPZ1:-0.715503908595;AHR_ARNT_ARNT2:-0.74944265521;ZNF423:-0.749966252093;HES1:-0.758936245558;NHLH1,2:-0.759679488131;NKX2-1,4:-0.787933336538;PAX2:-0.796134735369;HMX1:-0.842171053837;ZEB1:-0.920020065438;MAFB:-0.949567198456;GLI1..3:-0.973031800126;NANOG{mouse}:-0.974287181741;ATF6:-1.00971840022;MTF1:-1.01441224337;TBP:-1.02453780208;AR:-1.17451334092;ESR1:-1.23409759281;HIF1A:-1.44653644786HOXA9_MEIS1:1.56891988048;ZNF384:1.50429374809;TFDP1:1.48315412703;POU3F1..4:1.28353871852;FOXD3:1.15739213951;GFI1:1.09682925119;ZIC1..3:1.00548160803;PRRX1,2:0.987949829276;XCPE1{core}:0.946020048246;ADNP_IRX_SIX_ZHX:0.916756218003;E2F1..5:0.912049446247;NKX2-3_NKX2-5:0.897542744393;NKX6-1,2:0.869410711027;NR3C1:0.861893142482;ZNF143:0.838769432062;EN1,2:0.833327232514;NRF1:0.817646622573;PITX1..3:0.80014656972;EVI1:0.782884243858;TLX1..3_NFIC{dimer}:0.760301678428;PAX4:0.727914137584;ARID5B:0.726601756758;STAT5{A,B}:0.724040308376;NFY{A,B,C}:0.708599381552;NKX3-1:0.704302365479;TEAD1:0.682307687602;FOXM1:0.668689159644;HBP1_HMGB_SSRP1_UBTF:0.650089253339;OCT4_SOX2{dimer}:0.554838880731;EGR1..3:0.543722264576;ALX4:0.54301582737;SOX2:0.537297085458;SOX17:0.529742096863;ELK1,4_GABP{A,B1}:0.524237296128;AIRE:0.4922945392;MZF1:0.467499332397;RFX1:0.464430303252;ZNF148:0.456877837395;GTF2I:0.439649537783;GTF2A1,2:0.433937649855;TLX2:0.430857691968;HOX{A6,A7,B6,B7}:0.423264982165;GFI1B:0.409704372625;PDX1:0.403395697911;ONECUT1,2:0.403311650471;MYBL2:0.40138079277;TEF:0.395779604734;TFAP2{A,C}:0.395212660146;TAL1_TCF{3,4,12}:0.392795959431;ZNF238:0.387396615103;NFE2:0.375837715522;HOX{A5,B5}:0.365501924496;NFIX:0.364927391797;BACH2:0.353355051367;NFE2L2:0.347210665671;FOXQ1:0.346445790501;PBX1:0.343020842105;IKZF2:0.334434171323;LHX3,4:0.300315595916;KLF4:0.294401232163;SP1:0.29234147276;GATA4:0.29126086062;EBF1:0.289518596668;TP53:0.284037939544;RBPJ:0.279940551118;HIC1:0.26694633634;RXRA_VDR{dimer}:0.256985529281;TFAP2B:0.252086297802;HSF1,2:0.241762064107;CDX1,2,4:0.224294686574;PRDM1:0.223697517975;CUX2:0.220153261232;PAX8:0.215699228713;STAT1,3:0.208315610608;FOS_FOS{B,L1}_JUN{B,D}:0.199582572243;LEF1_TCF7_TCF7L1,2:0.173709422215;FOX{F1,F2,J1}:0.172074405678;PATZ1:0.171400607961;CRX:0.156051289983;POU2F1..3:0.135119918285;ZBTB6:0.126281320493;RREB1:0.115636995867;FOXP1:0.107248936749;ZFP161:0.0962191048444;NR1H4:0.0898864719947;DBP:0.076687927317;HMGA1,2:0.0702330893517;POU5F1:0.0700515352699;PPARG:0.0644075938692;GCM1,2:0.054776104111;FOX{I1,J2}:0.0529976597621;MEF2{A,B,C,D}:0.0324850790642;MYB:0.0279756868478;FOXA2:0.0226085639019;NANOG:0.0210490830619;bHLH_family:0.0169237731466;PAX5:0.0165510444121;ZBTB16:0.00969705596414;FOSL2:0.000419134560721;CDC5L:-0.003791170842;PAX6:-0.016037677669;MAZ:-0.0291300535691;PAX3,7:-0.036916662813;IRF7:-0.0547088789851;POU1F1:-0.0573929669937;HNF1A:-0.0612811437156;MED-1{core}:-0.0621975045573;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.0654864281347;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.0744799394941;MTE{core}:-0.0835281754505;YY1:-0.096011907499;IRF1,2:-0.0965854553695;NFATC1..3:-0.131682678989;RXR{A,B,G}:-0.140749958487;BREu{core}:-0.169341066623;RUNX1..3:-0.174194242764;EP300:-0.179671100097;DMAP1_NCOR{1,2}_SMARC:-0.179753538878;ELF1,2,4:-0.182568858764;PAX1,9:-0.187757660664;STAT2,4,6:-0.204777133229;NKX3-2:-0.210036102811;FOXO1,3,4:-0.217311066637;HOX{A4,D4}:-0.217843938571;BPTF:-0.218574937013;TFCP2:-0.223777731752;FOXN1:-0.224914110654;HNF4A_NR2F1,2:-0.226866237077;SMAD1..7,9:-0.228302755109;UFEwm:-0.242797136038;IKZF1:-0.243773743414;SOX{8,9,10}:-0.247985797887;HLF:-0.251087879993;GATA6:-0.252600918913;SRF:-0.267698329311;MYFfamily:-0.278950239244;LMO2:-0.28492400918;MYOD1:-0.295078764939;SREBF1,2:-0.295376442915;NFKB1_REL_RELA:-0.298840253187;VSX1,2:-0.319010117347;TBX4,5:-0.3195608387;POU6F1:-0.323295326704;RORA:-0.326324102292;T:-0.337013705788;ETS1,2:-0.341808504568;NR6A1:-0.346700623035;XBP1:-0.347971395184;SNAI1..3:-0.381954753957;CEBPA,B_DDIT3:-0.384772828434;SOX5:-0.386033407687;ATF2:-0.417313391185;TGIF1:-0.43231836085;SPIB:-0.435029987979;FOXP3:-0.445680947049;REST:-0.450385534166;FOXL1:-0.463835183603;SPI1:-0.491033514912;ATF4:-0.491639242431;GZF1:-0.504421677372;ATF5_CREB3:-0.512056098113;TOPORS:-0.523925803734;JUN:-0.539785820423;TFAP4:-0.546592761034;RFX2..5_RFXANK_RFXAP:-0.563323257556;NKX2-1,4:-0.584514308746;NFIL3:-0.587545586975;CREB1:-0.598143438596;ESRRA:-0.646185228617;ZNF423:-0.68744848675;ALX1:-0.699007194503;SPZ1:-0.699294522183;GLI1..3:-0.710422105591;PAX2:-0.713463081882;HAND1,2:-0.714351002054;NR5A1,2:-0.718276199324;NFE2L1:-0.726355184719;NHLH1,2:-0.740298406838;FOX{D1,D2}:-0.806806231106;AHR_ARNT_ARNT2:-0.807773028169;HES1:-0.843751799549;MTF1:-0.857129175993;NKX2-2,8:-0.871206911279;HMX1:-0.871478569741;ZEB1:-0.890338797116;ATF6:-1.00401389868;MAFB:-1.06034076665;TBP:-1.07851206176;AR:-1.09445392476;NANOG{mouse}:-1.10226740796;ESR1:-1.20572312277;HIF1A:-1.34887487836
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10444-106F3;search_select_hide=table117:FF:10444-106F3
}}
}}

Latest revision as of 14:02, 3 June 2020

Name:glioblastoma cell line:A172
Species:Human (Homo sapiens)
Library ID:CNhs11248,CNhs11185
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuebrain
dev stageNA
sexunknown
ageunknown
cell typeglioblast
cell lineA172
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005163
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11248 CAGE DRX007897 DRR008769
CNhs11185 CAGE DRX007898 DRR008770
Accession ID Hg19

Library idBAMCTSS
CNhs11248 DRZ000194 DRZ001579
CNhs11185 DRZ000195 DRZ001580
Accession ID Hg38

Library idBAMCTSS
CNhs11248 DRZ011544 DRZ012929
CNhs11185 DRZ011545 DRZ012930
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload
HumanCAGEScan Download raw sequence, BAM & CTSS

Library id3prime-FASTQ5prime-FASTQBAMCTSS
NCig10059downloaddownloaddownloaddownload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0921
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.448
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0186
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.115
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.0529
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0.75
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0766
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.131
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.0814
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0271
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.397
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.169
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.149
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.104
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.0283
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0432
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.436
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.00766
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.144
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.0432
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0.823
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.1
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.117
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.0945
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.00895
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0711
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.402
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.152
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.197
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.119
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.0432
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11248

Jaspar motifP-value
MA0002.20.136
MA0003.10.0527
MA0004.10.6
MA0006.10.247
MA0007.10.105
MA0009.10.568
MA0014.10.592
MA0017.10.0541
MA0018.20.282
MA0019.10.77
MA0024.15.97471e-6
MA0025.10.491
MA0027.10.288
MA0028.10.0589
MA0029.10.446
MA0030.10.671
MA0031.10.135
MA0035.20.213
MA0038.14.78785e-6
MA0039.20.0615
MA0040.10.798
MA0041.10.897
MA0042.10.341
MA0043.10.00488
MA0046.10.32
MA0047.20.0712
MA0048.10.197
MA0050.10.962
MA0051.10.117
MA0052.10.0738
MA0055.10.214
MA0057.10.576
MA0058.10.717
MA0059.10.117
MA0060.11.2548e-9
MA0061.10.00577
MA0062.20.12
MA0065.20.00432
MA0066.10.253
MA0067.10.644
MA0068.10.0156
MA0069.10.274
MA0070.10.369
MA0071.10.267
MA0072.10.813
MA0073.10.93
MA0074.10.458
MA0076.14.56326e-4
MA0077.10.146
MA0078.10.727
MA0079.20.0912
MA0080.27.83411e-8
MA0081.10.135
MA0083.10.786
MA0084.10.817
MA0087.10.747
MA0088.10.664
MA0090.15.19106e-6
MA0091.10.0975
MA0092.10.49
MA0093.10.868
MA0099.25.15617e-10
MA0100.10.423
MA0101.10.603
MA0102.20.00301
MA0103.10.00506
MA0104.20.16
MA0105.19.7831e-4
MA0106.10.825
MA0107.10.25
MA0108.20.0205
MA0111.10.461
MA0112.20.00348
MA0113.10.0607
MA0114.10.363
MA0115.10.961
MA0116.10.00435
MA0117.10.946
MA0119.10.92
MA0122.10.384
MA0124.10.983
MA0125.10.907
MA0131.10.76
MA0135.10.103
MA0136.13.09991e-5
MA0137.20.724
MA0138.20.0139
MA0139.10.175
MA0140.10.381
MA0141.10.0827
MA0142.10.569
MA0143.10.752
MA0144.10.285
MA0145.10.909
MA0146.10.894
MA0147.10.184
MA0148.10.153
MA0149.10.742
MA0150.10.119
MA0152.10.381
MA0153.10.737
MA0154.10.00837
MA0155.10.115
MA0156.10.794
MA0157.10.189
MA0159.10.0191
MA0160.10.306
MA0162.10.51
MA0163.11.44624e-7
MA0164.10.775
MA0258.10.0124
MA0259.10.228


library id: CNhs11185

Jaspar motifP-value
MA0002.20.171
MA0003.10.0424
MA0004.10.499
MA0006.10.157
MA0007.10.0279
MA0009.10.607
MA0014.10.45
MA0017.10.0144
MA0018.20.354
MA0019.10.841
MA0024.13.5473e-6
MA0025.10.294
MA0027.10.219
MA0028.10.064
MA0029.10.588
MA0030.10.482
MA0031.10.333
MA0035.20.252
MA0038.11.26641e-5
MA0039.20.054
MA0040.10.92
MA0041.10.664
MA0042.10.38
MA0043.10.00496
MA0046.10.266
MA0047.20.0812
MA0048.10.175
MA0050.10.891
MA0051.10.107
MA0052.10.117
MA0055.10.204
MA0057.10.54
MA0058.10.708
MA0059.10.119
MA0060.11.11513e-8
MA0061.10.00603
MA0062.20.273
MA0065.20.0015
MA0066.10.222
MA0067.10.584
MA0068.10.107
MA0069.10.425
MA0070.10.562
MA0071.10.449
MA0072.10.726
MA0073.10.942
MA0074.10.725
MA0076.18.91778e-4
MA0077.10.192
MA0078.10.685
MA0079.20.113
MA0080.23.24327e-7
MA0081.10.102
MA0083.10.886
MA0084.10.571
MA0087.10.487
MA0088.10.5
MA0090.12.78708e-6
MA0091.10.159
MA0092.10.389
MA0093.10.766
MA0099.23.32258e-11
MA0100.10.465
MA0101.10.51
MA0102.20.00485
MA0103.10.01
MA0104.20.114
MA0105.10.00216
MA0106.10.991
MA0107.10.203
MA0108.20.0115
MA0111.10.467
MA0112.20.013
MA0113.10.0834
MA0114.10.164
MA0115.10.654
MA0116.10.00792
MA0117.10.834
MA0119.10.658
MA0122.10.444
MA0124.10.892
MA0125.10.787
MA0131.10.591
MA0135.10.0131
MA0136.11.02242e-4
MA0137.20.79
MA0138.20.0206
MA0139.10.273
MA0140.10.155
MA0141.10.194
MA0142.10.953
MA0143.10.781
MA0144.10.164
MA0145.10.831
MA0146.10.9
MA0147.10.163
MA0148.10.17
MA0149.10.652
MA0150.10.0461
MA0152.10.574
MA0153.10.688
MA0154.10.0137
MA0155.10.123
MA0156.10.734
MA0157.10.262
MA0159.10.00639
MA0160.10.293
MA0162.10.488
MA0163.18.65413e-8
MA0164.10.974
MA0258.10.0845
MA0259.10.173



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11248

Novel motifP-value
10.611
100.277
1000.944
1010.422
1020.484
1030.624
1040.624
1050.771
1063.11104e-4
1070.38
1080.561
1090.378
110.321
1100.698
1110.374
1120.0136
1130.207
1140.209
1150.35
1160.952
1170.929
1180.963
1190.819
120.274
1200.693
1210.763
1220.809
1230.31
1240.214
1250.96
1260.11
1270.528
1280.00968
1290.434
130.0968
1300.0775
1310.229
1320.632
1330.402
1340.478
1350.0744
1360.117
1370.0176
1380.211
1390.00206
140.852
1400.707
1410.549
1420.0452
1430.445
1440.622
1450.624
1460.671
1470.46
1480.204
1490.257
150.67
1500.834
1510.534
1520.33
1530.166
1540.456
1550.262
1560.707
1570.757
1580.685
1590.651
160.172
1600.349
1610.589
1620.892
1630.108
1640.271
1650.55
1660.604
1670.252
1680.552
1690.43
170.541
180.353
190.373
20.61
200.827
210.599
220.733
230.37
240.633
250.26
260.442
270.132
280.326
290.331
30.371
300.66
310.962
320.00542
330.448
340.328
350.116
360.0219
370.517
380.593
390.235
40.832
400.128
410.424
420.925
430.109
440.189
450.911
460.239
470.837
480.735
490.0642
50.0718
500.936
510.671
520.107
530.873
540.958
550.798
560.545
570.622
580.0507
590.16
60.229
600.00448
610.806
620.0944
630.229
640.374
650.0847
666.33585e-4
670.807
680.741
690.459
70.0322
700.00331
710.476
720.26
730.314
740.888
750.219
760.0569
770.345
780.466
790.0943
80.799
800.773
810.483
820.381
830.851
840.701
850.00462
860.419
870.711
880.555
890.0335
90.114
900.761
910.0888
920.178
930.754
940.364
950.0995
960.167
970.0954
980.00431
990.583


library id: CNhs11185

Novel motifP-value
10.643
100.359
1000.99
1010.762
1020.219
1030.439
1040.633
1050.551
1065.4886e-4
1070.397
1080.557
1090.396
110.319
1100.666
1110.509
1120.00791
1130.23
1140.301
1150.396
1160.831
1170.963
1180.657
1190.934
120.379
1200.578
1210.844
1220.785
1230.862
1240.273
1250.736
1260.0342
1270.689
1280.00681
1290.408
130.0756
1300.0755
1310.0761
1320.479
1330.577
1340.671
1350.122
1360.121
1370.00945
1380.275
1390.00813
140.943
1400.591
1410.603
1420.0192
1430.329
1440.984
1450.76
1460.753
1470.449
1480.42
1490.37
150.744
1500.893
1510.629
1520.256
1530.34
1540.585
1550.372
1560.891
1570.885
1580.469
1590.793
160.284
1600.324
1610.654
1620.866
1630.337
1640.148
1650.556
1660.751
1670.235
1680.751
1690.477
170.489
180.481
190.456
20.749
200.946
210.733
220.824
230.355
240.523
250.244
260.396
270.234
280.262
290.21
30.626
300.657
310.904
320.00719
330.395
340.24
350.137
360.0152
370.504
380.843
390.186
40.847
400.0351
410.43
420.756
430.0766
440.0649
450.917
460.241
470.919
480.872
490.0676
50.0484
500.992
510.623
520.0769
530.43
540.798
550.786
560.223
570.476
580.0269
590.15
60.372
600.00246
610.969
620.0783
630.303
640.391
650.121
668.6527e-4
670.934
680.914
690.444
70.0407
700.0296
710.539
720.13
730.199
740.888
750.275
760.0324
770.656
780.515
790.164
80.748
800.915
810.522
820.527
830.875
840.838
850.00404
860.367
870.502
880.736
890.0855
90.0637
900.478
910.0965
920.271
930.555
940.173
950.124
960.118
970.143
980.0123
990.503



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11248
library id: CNhs11185


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0002319 (neural cell)
0000095 (neuron associated cell)
0000243 (glial cell (sensu Vertebrata))
0000125 (glial cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
3093 (nervous system cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000955 (brain)
0004121 (ectoderm-derived structure)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0101530 (glioblastoma cell line sample)
0100711 (glioma cell line sample)
0100255 (brain cell line sample)
0100690 (brain cancer cell line sample)
0101531 (glial cell line sample)
0100016 (A-172 cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000339 (glioblast (sensu Vertebrata))
CL:0000221 (ectodermal cell)
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0006238 (future brain)
UBERON:0010316 (germ layer / neural crest)

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