FF:10552-107I3: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468 | |DRA_sample_Accession=CAGE@SAMD00005160 | ||
|HumanCAGEScanFiles=NCig10063;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/cervical%2520cancer%2520cell%2520line%253aD98-AH2%252c%2520tech_rep1.NCig10063.10552-107I3.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/cervical%2520cancer%2520cell%2520line%253aD98-AH2%252c%2520tech_rep1.NCig10063.10552-107I3.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/cervical%2520cancer%2520cell%2520line%253aD98-AH2%252c%2520tech_rep1.NCig10063.10552-107I3.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/cervical%2520cancer%2520cell%2520line%253aD98-AH2%252c%2520tech_rep1.NCig10063.10552-107I3.hg19.GCTATA.pairs.bed.gz!NCig10127;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/cervical%2520cancer%2520cell%2520line%253aD98-AH2%252c%2520tech_rep2.NCig10127.10552-107I3.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/cervical%2520cancer%2520cell%2520line%253aD98-AH2%252c%2520tech_rep2.NCig10127.10552-107I3.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/cervical%2520cancer%2520cell%2520line%253aD98-AH2%252c%2520tech_rep2.NCig10127.10552-107I3.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/cervical%2520cancer%2520cell%2520line%253aD98-AH2%252c%2520tech_rep2.NCig10127.10552-107I3.hg19.GCTATA.pairs.bed.gz | |||
|accession_numbers=CAGE;DRX007845;DRR008717;DRZ000142;DRZ001527;DRZ011492;DRZ012877 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000002,UBERON:0000995,UBERON:0003134,UBERON:0001560,UBERON:0005156,UBERON:0000064,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0003975,UBERON:0004175,UBERON:0010317,UBERON:0003100,UBERON:0000474 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:193,DOID:120,DOID:4362 | |ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:193,DOID:120,DOID:4362 | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0101967 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr6:10415276..10415341,-!p2@TFAP2A!1.97!112.42!TFAP2A;;chr6:10412600..10412637,-!p1@TFAP2A!1.90!128.11!TFAP2A;;chr6:10415484..10415508,-!p3@TFAP2A!1.80!62.42!TFAP2A;;chr6:1312325..1312340,+!p1@FOXQ1!1.70!77.78!FOXQ1;;chr5:134369879..134369898,-!p2@PITX1!1.49!29.96!PITX1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.40!23.97!ZBED1;;chr2:46524897..46524911,+!p2@EPAS1!1.39!64.06!EPAS1;;chr12:54380404..54380433,+!p3@HOXC10!1.34!20.70!HOXC10;;chr12:52445218..52445237,+!p1@NR4A1!1.32!241.84!NR4A1;;chr10:28034739..28034756,-!p1@MKX!1.32!20.04!MKX;;chr7:73038839..73038862,-!p1@MLXIPL!1.30!19.17!MLXIPL;;chrX:57619447..57619495,+!p2@ZXDB!1.29!18.52!ZXDB;;chr5:134369905..134369972,-!p1@PITX1!1.27!27.13!PITX1;;chr6:10412576..10412599,-!p5@TFAP2A!1.26!17.21!TFAP2A;;chr6:10412392..10412409,-!p4@TFAP2A!1.23!18.30!TFAP2A;;chr19:2867325..2867348,+!p1@ZNF556!1.17!13.73!ZNF556;;chr2:157189180..157189290,-!p1@NR4A2!1.15!67.98!NR4A2;;chr10:35484053..35484076,+!p1@CREM!1.14!32.14!CREM;;chr17:46682321..46682362,-!p1@HOXB6!1.14!12.75!HOXB6;;chr6:1389789..1389821,+!p1@FOXF2!1.12!16.67!FOXF2;;chr17:46703942..46703964,-!p4@HOXB9!1.11!11.87!HOXB9;;chr17:46687959..46688007,-!p2@HOXB7!1.10!15.91!HOXB7;;chr6:1312155..1312187,+!p2@FOXQ1!1.07!10.78!FOXQ1;;chr12:80084737..80084763,-!p3@PAWR!1.05!39.11!PAWR;;chr17:48072574..48072597,-!p1@DLX3!1.05!10.35!DLX3;;chr3:69915385..69915438,+!p3@MITF!1.01!9.15!MITF;;chr5:170736243..170736279,+!p1@TLX3!1.00!9.04!TLX3;;chr1:151804244..151804310,-!p1@RORC!1.00!9.04!RORC;;chr6:10419824..10419840,-!p9@TFAP2A!1.00!8.93!TFAP2A;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.99!8.72!HOXC5;;chr5:76383070..76383117,-!p3@ZBED3!0.98!17.43!ZBED3;;chrX:2418598..2418621,-!p2@ZBED1!0.98!8.61!ZBED1;;chr13:45010939..45011033,-!p1@TSC22D1!0.97!556.57!TSC22D1;;chr8:128748308..128748324,+!p2@MYC!0.97!236.18!MYC;;chr11:12696071..12696086,+!p3@TEAD1!0.97!11.11!TEAD1;;chr17:53342311..53342400,+!p1@HLF!0.96!9.26!HLF;;chr7:101917447..101917479,+!p4@CUX1!0.96!8.17!CUX1;;chr2:238592039..238592054,+!p4@LRRFIP1!0.94!7.73!LRRFIP1;;chr3:69915369..69915381,+!p4@MITF!0.93!7.52!MITF;;chr5:43120995..43121052,+!p1@ZNF131!0.92!38.46!ZNF131;;chr6:10415263..10415274,-!p8@TFAP2A!0.90!6.97!TFAP2A;;chr19:45971246..45971265,+!p1@FOSB!0.89!133.23!FOSB;;chr5:150284532..150284549,-!p1@ZNF300!0.89!14.49!ZNF300;;chr15:96875657..96875760,+!p14@NR2F2!0.89!11.44!NR2F2;;chr17:46703687..46703740,-!p1@HOXB9!0.89!6.75!HOXB9;;chr6:34205372..34205412,+!p5@HMGA1!0.87!33.99!HMGA1;;chr11:12696002..12696022,+!p2@TEAD1!0.87!16.45!TEAD1;;chr1:44513995..44514031,+!p1@KLF17!0.87!6.43!KLF17;;chr10:28034772..28034783,-!p4@MKX!0.86!6.32!MKX;;chr7:101460882..101460923,+!p5@CUX1!0.86!6.21!CUX1;;chr9:102584262..102584276,+!p1@NR4A3!0.85!14.27!NR4A3;;chr6:28973090..28973094,-!p1@ZNF311!0.85!7.84!ZNF311;;chr6:10419768..10419819,-!p6@TFAP2A!0.84!5.99!TFAP2A;;chr19:46271505..46271575,-!p2@SIX5!0.83!15.47!SIX5;;chr7:1577111..1577132,+!p4@MAFK!0.83!6.54!MAFK;;chr2:46524878..46524891,+!p3@EPAS1!0.81!10.02!EPAS1;;chrX:107018969..107019024,-!p6@TSC22D3!0.81!7.73!TSC22D3;;chr2:63277948..63277974,+!p1@OTX1!0.81!5.45!OTX1;;chr7:101917407..101917443,+!p3@CUX1!0.81!5.45!CUX1;;chr9:96717629..96717644,-!p1@BARX1!0.80!5.34!BARX1;;chr1:161736038..161736056,+!p4@ATF6!0.79!12.75!ATF6;;chr20:6748325..6748352,+!p1@BMP2!0.79!7.73!BMP2;;chr9:124976185..124976212,-!p4@LHX6!0.79!5.12!LHX6;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.79!5.12!SEBOX;;chr1:212782094..212782109,+!p1@ATF3!0.78!151.53!ATF3;;chr6:28973366..28973394,-!p2@ZNF311!0.78!6.21!ZNF311;;chr5:176738887..176738934,-!p1@MXD3!0.77!35.41!MXD3;;chr3:128206762..128206781,-!p2@GATA2!0.77!33.23!GATA2;;chr1:23857698..23857733,-!p1@E2F2!0.77!9.48!E2F2;;chr11:31832658..31832681,-!p1@PAX6!0.77!4.90!PAX6;;chr15:41913690..41913753,+!p2@MGA!0.76!12.20!MGA;;chr2:75937794..75937867,-!p2@GCFC2!0.76!11.22!GCFC2;;chr15:67418119..67418162,+!p5@SMAD3!0.76!5.34!SMAD3;;chr12:54378923..54378966,+!p1@HOXC10!0.76!4.79!HOXC10;;chrX:131623044..131623089,-!p1@MBNL3!0.75!20.92!MBNL3;;chr9:110250697..110250738,-!p2@KLF4!0.74!5.34!KLF4;;chr9:126774018..126774055,+!p1@LHX2!0.74!4.47!LHX2;;chr6:126102292..126102329,+!p3@NCOA7!0.73!15.80!NCOA7;;chr9:100616439..100616476,+!p3@FOXE1!0.73!4.36!FOXE1;;chr5:16465902..16465917,-!p1@ZNF622!0.71!110.57!ZNF622;;chr5:76383133..76383186,-!p2@ZBED3!0.71!9.04!ZBED3;;chr17:46806067..46806097,-!p1@HOXB13!0.71!4.14!HOXB13;;chr12:54380036..54380091,+!p4@HOXC10!0.71!4.14!HOXC10;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.71!4.14!HOXC5;;chr2:113012592..113012671,-!p1@ZC3H8!0.70!77.78!ZC3H8;;chr17:41277372..41277418,-!p1@BRCA1!0.70!16.34!BRCA1;;chr7:148581327..148581347,-!p2@EZH2!0.70!15.36!EZH2;;chr19:49140609..49140643,-!p1@DBP!0.69!24.73!DBP;;chr9:99180617..99180658,-!p1@ZNF367!0.68!9.04!ZNF367;;chr6:28303901..28303944,-!p2@ZNF323!0.68!6.54!ZNF323;;chrX:131624056..131624069,-!p2@MBNL3!0.68!5.34!MBNL3;;chrX:131622958..131622978,-!p3@MBNL3!0.67!4.79!MBNL3;;chr9:102584241..102584261,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| |expression_enrichment_score=chr6:10415276..10415341,-!p2@TFAP2A!1.97!112.42!TFAP2A;;chr6:10412600..10412637,-!p1@TFAP2A!1.90!128.11!TFAP2A;;chr6:10415484..10415508,-!p3@TFAP2A!1.80!62.42!TFAP2A;;chr6:1312325..1312340,+!p1@FOXQ1!1.70!77.78!FOXQ1;;chr5:134369879..134369898,-!p2@PITX1!1.49!29.96!PITX1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.40!23.97!ZBED1;;chr2:46524897..46524911,+!p2@EPAS1!1.39!64.06!EPAS1;;chr12:54380404..54380433,+!p3@HOXC10!1.34!20.70!HOXC10;;chr12:52445218..52445237,+!p1@NR4A1!1.32!241.84!NR4A1;;chr10:28034739..28034756,-!p1@MKX!1.32!20.04!MKX;;chr7:73038839..73038862,-!p1@MLXIPL!1.30!19.17!MLXIPL;;chrX:57619447..57619495,+!p2@ZXDB!1.29!18.52!ZXDB;;chr5:134369905..134369972,-!p1@PITX1!1.27!27.13!PITX1;;chr6:10412576..10412599,-!p5@TFAP2A!1.26!17.21!TFAP2A;;chr6:10412392..10412409,-!p4@TFAP2A!1.23!18.30!TFAP2A;;chr19:2867325..2867348,+!p1@ZNF556!1.17!13.73!ZNF556;;chr2:157189180..157189290,-!p1@NR4A2!1.15!67.98!NR4A2;;chr10:35484053..35484076,+!p1@CREM!1.14!32.14!CREM;;chr17:46682321..46682362,-!p1@HOXB6!1.14!12.75!HOXB6;;chr6:1389789..1389821,+!p1@FOXF2!1.12!16.67!FOXF2;;chr17:46703942..46703964,-!p4@HOXB9!1.11!11.87!HOXB9;;chr17:46687959..46688007,-!p2@HOXB7!1.10!15.91!HOXB7;;chr6:1312155..1312187,+!p2@FOXQ1!1.07!10.78!FOXQ1;;chr12:80084737..80084763,-!p3@PAWR!1.05!39.11!PAWR;;chr17:48072574..48072597,-!p1@DLX3!1.05!10.35!DLX3;;chr3:69915385..69915438,+!p3@MITF!1.01!9.15!MITF;;chr5:170736243..170736279,+!p1@TLX3!1.00!9.04!TLX3;;chr1:151804244..151804310,-!p1@RORC!1.00!9.04!RORC;;chr6:10419824..10419840,-!p9@TFAP2A!1.00!8.93!TFAP2A;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.99!8.72!HOXC5;;chr5:76383070..76383117,-!p3@ZBED3!0.98!17.43!ZBED3;;chrX:2418598..2418621,-!p2@ZBED1!0.98!8.61!ZBED1;;chr13:45010939..45011033,-!p1@TSC22D1!0.97!556.57!TSC22D1;;chr8:128748308..128748324,+!p2@MYC!0.97!236.18!MYC;;chr11:12696071..12696086,+!p3@TEAD1!0.97!11.11!TEAD1;;chr17:53342311..53342400,+!p1@HLF!0.96!9.26!HLF;;chr7:101917447..101917479,+!p4@CUX1!0.96!8.17!CUX1;;chr2:238592039..238592054,+!p4@LRRFIP1!0.94!7.73!LRRFIP1;;chr3:69915369..69915381,+!p4@MITF!0.93!7.52!MITF;;chr5:43120995..43121052,+!p1@ZNF131!0.92!38.46!ZNF131;;chr6:10415263..10415274,-!p8@TFAP2A!0.90!6.97!TFAP2A;;chr19:45971246..45971265,+!p1@FOSB!0.89!133.23!FOSB;;chr5:150284532..150284549,-!p1@ZNF300!0.89!14.49!ZNF300;;chr15:96875657..96875760,+!p14@NR2F2!0.89!11.44!NR2F2;;chr17:46703687..46703740,-!p1@HOXB9!0.89!6.75!HOXB9;;chr6:34205372..34205412,+!p5@HMGA1!0.87!33.99!HMGA1;;chr11:12696002..12696022,+!p2@TEAD1!0.87!16.45!TEAD1;;chr1:44513995..44514031,+!p1@KLF17!0.87!6.43!KLF17;;chr10:28034772..28034783,-!p4@MKX!0.86!6.32!MKX;;chr7:101460882..101460923,+!p5@CUX1!0.86!6.21!CUX1;;chr9:102584262..102584276,+!p1@NR4A3!0.85!14.27!NR4A3;;chr6:28973090..28973094,-!p1@ZNF311!0.85!7.84!ZNF311;;chr6:10419768..10419819,-!p6@TFAP2A!0.84!5.99!TFAP2A;;chr19:46271505..46271575,-!p2@SIX5!0.83!15.47!SIX5;;chr7:1577111..1577132,+!p4@MAFK!0.83!6.54!MAFK;;chr2:46524878..46524891,+!p3@EPAS1!0.81!10.02!EPAS1;;chrX:107018969..107019024,-!p6@TSC22D3!0.81!7.73!TSC22D3;;chr2:63277948..63277974,+!p1@OTX1!0.81!5.45!OTX1;;chr7:101917407..101917443,+!p3@CUX1!0.81!5.45!CUX1;;chr9:96717629..96717644,-!p1@BARX1!0.80!5.34!BARX1;;chr1:161736038..161736056,+!p4@ATF6!0.79!12.75!ATF6;;chr20:6748325..6748352,+!p1@BMP2!0.79!7.73!BMP2;;chr9:124976185..124976212,-!p4@LHX6!0.79!5.12!LHX6;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.79!5.12!SEBOX;;chr1:212782094..212782109,+!p1@ATF3!0.78!151.53!ATF3;;chr6:28973366..28973394,-!p2@ZNF311!0.78!6.21!ZNF311;;chr5:176738887..176738934,-!p1@MXD3!0.77!35.41!MXD3;;chr3:128206762..128206781,-!p2@GATA2!0.77!33.23!GATA2;;chr1:23857698..23857733,-!p1@E2F2!0.77!9.48!E2F2;;chr11:31832658..31832681,-!p1@PAX6!0.77!4.90!PAX6;;chr15:41913690..41913753,+!p2@MGA!0.76!12.20!MGA;;chr2:75937794..75937867,-!p2@GCFC2!0.76!11.22!GCFC2;;chr15:67418119..67418162,+!p5@SMAD3!0.76!5.34!SMAD3;;chr12:54378923..54378966,+!p1@HOXC10!0.76!4.79!HOXC10;;chrX:131623044..131623089,-!p1@MBNL3!0.75!20.92!MBNL3;;chr9:110250697..110250738,-!p2@KLF4!0.74!5.34!KLF4;;chr9:126774018..126774055,+!p1@LHX2!0.74!4.47!LHX2;;chr6:126102292..126102329,+!p3@NCOA7!0.73!15.80!NCOA7;;chr9:100616439..100616476,+!p3@FOXE1!0.73!4.36!FOXE1;;chr5:16465902..16465917,-!p1@ZNF622!0.71!110.57!ZNF622;;chr5:76383133..76383186,-!p2@ZBED3!0.71!9.04!ZBED3;;chr17:46806067..46806097,-!p1@HOXB13!0.71!4.14!HOXB13;;chr12:54380036..54380091,+!p4@HOXC10!0.71!4.14!HOXC10;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.71!4.14!HOXC5;;chr2:113012592..113012671,-!p1@ZC3H8!0.70!77.78!ZC3H8;;chr17:41277372..41277418,-!p1@BRCA1!0.70!16.34!BRCA1;;chr7:148581327..148581347,-!p2@EZH2!0.70!15.36!EZH2;;chr19:49140609..49140643,-!p1@DBP!0.69!24.73!DBP;;chr9:99180617..99180658,-!p1@ZNF367!0.68!9.04!ZNF367;;chr6:28303901..28303944,-!p2@ZNF323!0.68!6.54!ZNF323;;chrX:131624056..131624069,-!p2@MBNL3!0.68!5.34!MBNL3;;chrX:131622958..131622978,-!p3@MBNL3!0.67!4.79!MBNL3;;chr9:102584241..102584261,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| ||
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006603,UBERON:0010316 | |||
|fonse_cell_line=FF:0101967 | |fonse_cell_line=FF:0101967 | ||
|fonse_cell_line_closure=FF:0101967 | |fonse_cell_line_closure=FF:0101967 | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/cervical%2520cancer%2520cell%2520line%253aD98-AH2.CNhs11288.10552-107I3.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/cervical%2520cancer%2520cell%2520line%253aD98-AH2.CNhs11288.10552-107I3.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/cervical%2520cancer%2520cell%2520line%253aD98-AH2.CNhs11288.10552-107I3.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/cervical%2520cancer%2520cell%2520line%253aD98-AH2.CNhs11288.10552-107I3.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/cervical%2520cancer%2520cell%2520line%253aD98-AH2.CNhs11288.10552-107I3.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10552-107I3 | |id=FF:10552-107I3 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000210;;FF:0101967 | ||
|is_obsolete= | |||
|library_id=CNhs11288 | |||
|library_id_phase_based=2:CNhs11288 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10552 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10552 | |||
|name=cervical cancer cell line:D98-AH2 | |name=cervical cancer cell line:D98-AH2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=NCig10063,,, | |profile_cagescan=NCig10063,,, | ||
|profile_hcage=CNhs11288,LSID759,release008,COMPLETED | |profile_hcage=CNhs11288,LSID759,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.0581205176786563,0.122810500528481,-0.27483329820609,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0,0.0449074472351597,0,-0.153323010348428,0,0,0,0.0224537236175799,0,-0.0530504490328978,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,-0.0910325440779906,0,0,0,0,0,0,0,0,-0.00176129749525449,0,0,0,0,0,0,0.0449074472351597,-0.0520849140074454,0,0,0.121094920551945,0,0,0,0,0,0,0,0,0.0856034027394797,0,0,0,0,0,0,0,0,0,0.148381521410048,0,0,0,0,-0.00810239190957718,-0.212202957538817,0.0428017013697398,0,0,0.125614907685558,-0.168395701326129,0.0428017013697398,0,0.0224537236175799,0.157079990756217,-0.0531279040025467,-0.054618226919075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389918999446488,0.157079990756217,0,0,-0.144948413108805,-0.369469973175683,0.0449074472351597,0,0,0,0,0 | |||
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| |||
|rna_box=107 | |rna_box=107 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=71.77695 | |rna_weight_ug=71.77695 | ||
|sample_age=unknown | |sample_age=unknown | ||
|sample_category=cell lines | |||
|sample_cell_catalog=RCB2105 | |sample_cell_catalog=RCB2105 | ||
|sample_cell_line=D98-AH2 | |sample_cell_line=D98-AH2 | ||
| Line 69: | Line 92: | ||
|sample_ethnicity=unknown | |sample_ethnicity=unknown | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;9.98252982688994e-267!GO:0043231;intracellular membrane-bound organelle;5.26538800350387e-233!GO:0043227;membrane-bound organelle;9.04353852847405e-233!GO:0043226;organelle;3.86868371593252e-230!GO:0043229;intracellular organelle;1.23439680421222e-229!GO:0005737;cytoplasm;7.51233693049146e-172!GO:0044422;organelle part;8.8949382681038e-165!GO:0044446;intracellular organelle part;2.54264286914439e-163!GO:0044444;cytoplasmic part;4.91001217559357e-132!GO:0032991;macromolecular complex;2.93849075223997e-113!GO:0005634;nucleus;2.73234823613562e-107!GO:0044237;cellular metabolic process;2.82250490439078e-106!GO:0030529;ribonucleoprotein complex;3.04786165346342e-104!GO:0044238;primary metabolic process;3.60465867423835e-103!GO:0044428;nuclear part;5.67038082131781e-96!GO:0043233;organelle lumen;1.91315872572944e-95!GO:0031974;membrane-enclosed lumen;1.91315872572944e-95!GO:0043170;macromolecule metabolic process;3.36076697480692e-94!GO:0005739;mitochondrion;2.19117215865906e-89!GO:0003723;RNA binding;3.81464321766027e-89!GO:0006396;RNA processing;3.20713431260505e-69!GO:0005515;protein binding;2.36384941962762e-62!GO:0005840;ribosome;1.81124998079644e-60!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.4208344874668e-59!GO:0006412;translation;1.19366789484587e-58!GO:0044429;mitochondrial part;2.92701458424961e-57!GO:0043283;biopolymer metabolic process;9.17446544527377e-57!GO:0031981;nuclear lumen;1.16299030723711e-56!GO:0010467;gene expression;2.89482586538785e-56!GO:0043234;protein complex;4.84430568365904e-54!GO:0003735;structural constituent of ribosome;1.15825878856725e-51!GO:0031967;organelle envelope;2.41478685402936e-49!GO:0031090;organelle membrane;2.85795242877849e-49!GO:0031975;envelope;4.30051876454535e-49!GO:0016071;mRNA metabolic process;4.97618057953904e-49!GO:0044249;cellular biosynthetic process;1.99316813794148e-47!GO:0008380;RNA splicing;6.32162060893561e-46!GO:0006259;DNA metabolic process;6.37571130266768e-45!GO:0019538;protein metabolic process;7.9677344779496e-45!GO:0006397;mRNA processing;2.97274952741706e-44!GO:0033279;ribosomal subunit;7.06545137783266e-44!GO:0015031;protein transport;1.83084675958439e-43!GO:0033036;macromolecule localization;7.42821807852522e-43!GO:0016043;cellular component organization and biogenesis;1.73913855048489e-42!GO:0009058;biosynthetic process;3.1292085110995e-42!GO:0044267;cellular protein metabolic process;5.95142031550986e-40!GO:0044260;cellular macromolecule metabolic process;9.02286713808313e-40!GO:0045184;establishment of protein localization;2.58649670691761e-39!GO:0003676;nucleic acid binding;2.83242406985275e-39!GO:0008104;protein localization;3.87807396044289e-39!GO:0022613;ribonucleoprotein complex biogenesis and assembly;6.44967330392128e-39!GO:0009059;macromolecule biosynthetic process;7.12720548752018e-39!GO:0043228;non-membrane-bound organelle;1.01728339606698e-38!GO:0043232;intracellular non-membrane-bound organelle;1.01728339606698e-38!GO:0005829;cytosol;9.97382205153989e-37!GO:0005740;mitochondrial envelope;3.13537252568558e-35!GO:0019866;organelle inner membrane;3.17759533653684e-35!GO:0046907;intracellular transport;1.82414039895916e-34!GO:0005654;nucleoplasm;3.38075794558725e-34!GO:0005681;spliceosome;1.33703771975697e-33!GO:0005743;mitochondrial inner membrane;3.46556971355843e-33!GO:0031966;mitochondrial membrane;5.59321613216937e-33!GO:0006996;organelle organization and biogenesis;1.29777495678055e-32!GO:0065003;macromolecular complex assembly;1.34785188218301e-32!GO:0006974;response to DNA damage stimulus;2.69666912618337e-30!GO:0006886;intracellular protein transport;2.87861291397717e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.25362150394505e-29!GO:0007049;cell cycle;1.3157575216555e-29!GO:0022607;cellular component assembly;6.74436420802206e-28!GO:0044451;nucleoplasm part;4.73419204301976e-27!GO:0016070;RNA metabolic process;4.79738093631136e-27!GO:0006281;DNA repair;1.09646236011647e-26!GO:0031980;mitochondrial lumen;1.1159658622555e-26!GO:0005759;mitochondrial matrix;1.1159658622555e-26!GO:0005730;nucleolus;8.64291005918069e-26!GO:0044455;mitochondrial membrane part;1.63012099658319e-25!GO:0000166;nucleotide binding;6.67282178920085e-25!GO:0016874;ligase activity;3.99428819392134e-24!GO:0044445;cytosolic part;6.54017883827833e-24!GO:0015934;large ribosomal subunit;1.33613716258125e-23!GO:0006119;oxidative phosphorylation;2.68512995982135e-23!GO:0006457;protein folding;2.59151234480868e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.10210289627668e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;3.90834754712006e-22!GO:0016462;pyrophosphatase activity;3.95585683966201e-22!GO:0009719;response to endogenous stimulus;4.27009429914072e-22!GO:0051649;establishment of cellular localization;4.85048209261084e-22!GO:0006260;DNA replication;1.24402501877014e-21!GO:0051641;cellular localization;1.32989966503825e-21!GO:0017111;nucleoside-triphosphatase activity;1.59735561131251e-21!GO:0015935;small ribosomal subunit;2.064424447012e-21!GO:0022402;cell cycle process;2.40070791715093e-21!GO:0006512;ubiquitin cycle;2.513512343314e-21!GO:0000278;mitotic cell cycle;7.01238503896405e-21!GO:0005694;chromosome;1.20827444992231e-20!GO:0044265;cellular macromolecule catabolic process;7.20660981412477e-20!GO:0042254;ribosome biogenesis and assembly;7.8564826800861e-20!GO:0022618;protein-RNA complex assembly;8.56836553043902e-20!GO:0005746;mitochondrial respiratory chain;6.86705834642999e-19!GO:0005783;endoplasmic reticulum;6.88664446751161e-19!GO:0051603;proteolysis involved in cellular protein catabolic process;1.15461082523533e-18!GO:0005761;mitochondrial ribosome;1.25411658109353e-18!GO:0000313;organellar ribosome;1.25411658109353e-18!GO:0019941;modification-dependent protein catabolic process;2.08833356265077e-18!GO:0043632;modification-dependent macromolecule catabolic process;2.08833356265077e-18!GO:0012505;endomembrane system;3.41845807224776e-18!GO:0006511;ubiquitin-dependent protein catabolic process;4.27133793063147e-18!GO:0044257;cellular protein catabolic process;4.28598770071185e-18!GO:0006399;tRNA metabolic process;7.56041320101451e-18!GO:0044248;cellular catabolic process;2.43704260553077e-17!GO:0006605;protein targeting;3.01949476138463e-17!GO:0051186;cofactor metabolic process;3.28365007714451e-17!GO:0044427;chromosomal part;3.50606275776716e-17!GO:0008135;translation factor activity, nucleic acid binding;3.6108802125403e-17!GO:0044432;endoplasmic reticulum part;4.55054837578121e-17!GO:0032553;ribonucleotide binding;7.32446588298778e-17!GO:0032555;purine ribonucleotide binding;7.32446588298778e-17!GO:0022403;cell cycle phase;7.67512528041521e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.07915580155693e-16!GO:0017076;purine nucleotide binding;1.73330092960342e-16!GO:0043285;biopolymer catabolic process;3.27570022405046e-16!GO:0016887;ATPase activity;4.62684743947097e-16!GO:0005524;ATP binding;5.9518654962897e-16!GO:0050136;NADH dehydrogenase (quinone) activity;7.49030625463451e-16!GO:0003954;NADH dehydrogenase activity;7.49030625463451e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.49030625463451e-16!GO:0008134;transcription factor binding;7.85235852383657e-16!GO:0051082;unfolded protein binding;8.43198379197588e-16!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);8.43198379197588e-16!GO:0009057;macromolecule catabolic process;9.76507292034898e-16!GO:0032559;adenyl ribonucleotide binding;9.76507292034898e-16!GO:0042623;ATPase activity, coupled;1.0366464591788e-15!GO:0000502;proteasome complex (sensu Eukaryota);1.30090900766689e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;2.0963455163628e-15!GO:0000375;RNA splicing, via transesterification reactions;2.0963455163628e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.0963455163628e-15!GO:0030554;adenyl nucleotide binding;4.15608247245968e-15!GO:0051276;chromosome organization and biogenesis;9.78562442247725e-15!GO:0006732;coenzyme metabolic process;1.28040375364823e-14!GO:0005635;nuclear envelope;1.36850723507625e-14!GO:0000087;M phase of mitotic cell cycle;2.45960734812547e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.84770776998077e-14!GO:0042775;organelle ATP synthesis coupled electron transport;2.86207933233546e-14!GO:0042773;ATP synthesis coupled electron transport;2.86207933233546e-14!GO:0044453;nuclear membrane part;4.34005647411365e-14!GO:0007067;mitosis;4.94490561022238e-14!GO:0031965;nuclear membrane;7.47861618381303e-14!GO:0030964;NADH dehydrogenase complex (quinone);7.82788699387394e-14!GO:0045271;respiratory chain complex I;7.82788699387394e-14!GO:0005747;mitochondrial respiratory chain complex I;7.82788699387394e-14!GO:0003743;translation initiation factor activity;1.22182892161635e-13!GO:0051301;cell division;1.38119767965945e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.77437611237729e-13!GO:0048770;pigment granule;1.77437611237729e-13!GO:0042470;melanosome;1.77437611237729e-13!GO:0006364;rRNA processing;2.11112721139552e-13!GO:0004386;helicase activity;2.12414006544932e-13!GO:0030163;protein catabolic process;2.34355801355784e-13!GO:0016604;nuclear body;3.18772356056596e-13!GO:0065002;intracellular protein transport across a membrane;3.28528919802787e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.17849595276671e-13!GO:0016072;rRNA metabolic process;4.80440528661675e-13!GO:0005643;nuclear pore;9.08550061445345e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.33623195937992e-12!GO:0000279;M phase;1.69213834631659e-12!GO:0005789;endoplasmic reticulum membrane;2.000084874992e-12!GO:0048193;Golgi vesicle transport;2.36283261891841e-12!GO:0008026;ATP-dependent helicase activity;3.9376926401698e-12!GO:0006413;translational initiation;4.35672698847066e-12!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.63959005929594e-12!GO:0009055;electron carrier activity;1.73600157470097e-11!GO:0006325;establishment and/or maintenance of chromatin architecture;1.85347178335921e-11!GO:0009259;ribonucleotide metabolic process;1.9022085708352e-11!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.12563348048131e-11!GO:0004812;aminoacyl-tRNA ligase activity;2.12563348048131e-11!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.12563348048131e-11!GO:0043566;structure-specific DNA binding;2.78805290023623e-11!GO:0043038;amino acid activation;2.96868543280489e-11!GO:0006418;tRNA aminoacylation for protein translation;2.96868543280489e-11!GO:0043039;tRNA aminoacylation;2.96868543280489e-11!GO:0006366;transcription from RNA polymerase II promoter;2.99985396592495e-11!GO:0050657;nucleic acid transport;3.6123018984623e-11!GO:0051236;establishment of RNA localization;3.6123018984623e-11!GO:0050658;RNA transport;3.6123018984623e-11!GO:0006913;nucleocytoplasmic transport;3.93731820261563e-11!GO:0006403;RNA localization;4.68041552487534e-11!GO:0006323;DNA packaging;5.66302985671574e-11!GO:0006446;regulation of translational initiation;6.10652755870254e-11!GO:0046930;pore complex;6.82710320409866e-11!GO:0016607;nuclear speck;8.30970212128359e-11!GO:0051169;nuclear transport;9.29583254843077e-11!GO:0008565;protein transporter activity;9.76965847132724e-11!GO:0007005;mitochondrion organization and biogenesis;1.09387918609103e-10!GO:0043412;biopolymer modification;1.16676711718633e-10!GO:0006163;purine nucleotide metabolic process;1.16750025210565e-10!GO:0006261;DNA-dependent DNA replication;1.30404445681816e-10!GO:0003697;single-stranded DNA binding;1.82352979189524e-10!GO:0051726;regulation of cell cycle;2.96142649346322e-10!GO:0009260;ribonucleotide biosynthetic process;2.96852420453232e-10!GO:0051188;cofactor biosynthetic process;3.32744089086955e-10!GO:0000074;regulation of progression through cell cycle;3.36131306087243e-10!GO:0016779;nucleotidyltransferase activity;4.48208591490766e-10!GO:0003712;transcription cofactor activity;5.4675512224259e-10!GO:0008639;small protein conjugating enzyme activity;5.91258363265091e-10!GO:0009150;purine ribonucleotide metabolic process;7.29954492881419e-10!GO:0006164;purine nucleotide biosynthetic process;7.55694943960198e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.21658875267813e-09!GO:0004842;ubiquitin-protein ligase activity;1.38048152951783e-09!GO:0019787;small conjugating protein ligase activity;1.43264204018582e-09!GO:0006461;protein complex assembly;1.60542475633524e-09!GO:0009056;catabolic process;1.72653366266669e-09!GO:0017038;protein import;2.33933409963265e-09!GO:0005794;Golgi apparatus;2.43191123036541e-09!GO:0045333;cellular respiration;2.72297693052274e-09!GO:0009060;aerobic respiration;2.72714624471182e-09!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.86146517075425e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.21060468529548e-09!GO:0030532;small nuclear ribonucleoprotein complex;3.51136685890401e-09!GO:0012501;programmed cell death;3.65887076607056e-09!GO:0051028;mRNA transport;4.09961424836676e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.35906524261998e-09!GO:0009152;purine ribonucleotide biosynthetic process;4.68925074368761e-09!GO:0006915;apoptosis;4.98517211531328e-09!GO:0009199;ribonucleoside triphosphate metabolic process;7.54275016433893e-09!GO:0009141;nucleoside triphosphate metabolic process;8.41934097813289e-09!GO:0016881;acid-amino acid ligase activity;8.44120459595846e-09!GO:0009108;coenzyme biosynthetic process;9.41551538663373e-09!GO:0016787;hydrolase activity;1.1987981405874e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.3497027634053e-08!GO:0016568;chromatin modification;1.40942425252905e-08!GO:0005667;transcription factor complex;1.51271875051372e-08!GO:0051329;interphase of mitotic cell cycle;1.78968628132947e-08!GO:0009142;nucleoside triphosphate biosynthetic process;1.81528192323227e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.81528192323227e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.96091759511715e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.96091759511715e-08!GO:0015986;ATP synthesis coupled proton transport;1.99083622866323e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.99083622866323e-08!GO:0065004;protein-DNA complex assembly;2.20463049291186e-08!GO:0006464;protein modification process;2.3988632697033e-08!GO:0016192;vesicle-mediated transport;3.13805065596802e-08!GO:0008219;cell death;3.39481196049385e-08!GO:0016265;death;3.39481196049385e-08!GO:0008033;tRNA processing;3.74274151107969e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.93315455895507e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.93315455895507e-08!GO:0051325;interphase;5.48125640987833e-08!GO:0000785;chromatin;5.65115440758411e-08!GO:0009117;nucleotide metabolic process;5.80069998141456e-08!GO:0046034;ATP metabolic process;8.17764261453116e-08!GO:0006333;chromatin assembly or disassembly;8.80234350983103e-08!GO:0043687;post-translational protein modification;8.88759499473056e-08!GO:0003899;DNA-directed RNA polymerase activity;9.0299688795741e-08!GO:0005657;replication fork;1.31350496250063e-07!GO:0006754;ATP biosynthetic process;1.60685612423033e-07!GO:0006753;nucleoside phosphate metabolic process;1.60685612423033e-07!GO:0032446;protein modification by small protein conjugation;1.72991887296388e-07!GO:0006099;tricarboxylic acid cycle;1.86821762649115e-07!GO:0046356;acetyl-CoA catabolic process;1.86821762649115e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.19481344613369e-07!GO:0030120;vesicle coat;2.25712985273005e-07!GO:0030662;coated vesicle membrane;2.25712985273005e-07!GO:0016741;transferase activity, transferring one-carbon groups;2.3934678177645e-07!GO:0016567;protein ubiquitination;2.46338634029536e-07!GO:0006752;group transfer coenzyme metabolic process;2.84895077887612e-07!GO:0019829;cation-transporting ATPase activity;2.84936157912515e-07!GO:0000245;spliceosome assembly;2.92912393587151e-07!GO:0008168;methyltransferase activity;2.98677632686707e-07!GO:0000775;chromosome, pericentric region;3.19257258866476e-07!GO:0005793;ER-Golgi intermediate compartment;3.28157556618355e-07!GO:0006084;acetyl-CoA metabolic process;3.69513415430968e-07!GO:0009109;coenzyme catabolic process;3.84752871122662e-07!GO:0000151;ubiquitin ligase complex;4.1423695988277e-07!GO:0005819;spindle;4.19687886967779e-07!GO:0016491;oxidoreductase activity;4.97158645835492e-07!GO:0048475;coated membrane;5.10259363690843e-07!GO:0030117;membrane coat;5.10259363690843e-07!GO:0016469;proton-transporting two-sector ATPase complex;6.08602240898762e-07!GO:0045259;proton-transporting ATP synthase complex;6.30714826594027e-07!GO:0015630;microtubule cytoskeleton;6.76257272657343e-07!GO:0043623;cellular protein complex assembly;7.86415467772247e-07!GO:0005762;mitochondrial large ribosomal subunit;9.43766387509243e-07!GO:0000315;organellar large ribosomal subunit;9.43766387509243e-07!GO:0005788;endoplasmic reticulum lumen;1.13974859423746e-06!GO:0005768;endosome;1.21993657093239e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.22478748583179e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.25017620708669e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.27173420065622e-06!GO:0051187;cofactor catabolic process;1.38259146880658e-06!GO:0051427;hormone receptor binding;1.73482923855882e-06!GO:0003690;double-stranded DNA binding;2.21864948406202e-06!GO:0008654;phospholipid biosynthetic process;2.33028796790378e-06!GO:0006613;cotranslational protein targeting to membrane;2.62659592883299e-06!GO:0016740;transferase activity;2.90067956407734e-06!GO:0005813;centrosome;2.91785957553948e-06!GO:0008094;DNA-dependent ATPase activity;3.16993058940376e-06!GO:0003713;transcription coactivator activity;3.55668828881169e-06!GO:0000314;organellar small ribosomal subunit;3.7117298431267e-06!GO:0005763;mitochondrial small ribosomal subunit;3.7117298431267e-06!GO:0035257;nuclear hormone receptor binding;4.18151878873275e-06!GO:0006839;mitochondrial transport;5.13334317574819e-06!GO:0044452;nucleolar part;5.21308511974123e-06!GO:0003724;RNA helicase activity;5.69148218872937e-06!GO:0006414;translational elongation;6.08724690417288e-06!GO:0005815;microtubule organizing center;6.3216313759576e-06!GO:0000075;cell cycle checkpoint;6.58515089488844e-06!GO:0004298;threonine endopeptidase activity;7.16927178655607e-06!GO:0003684;damaged DNA binding;9.30024206935315e-06!GO:0006626;protein targeting to mitochondrion;1.11674238089973e-05!GO:0006302;double-strand break repair;1.17554246434939e-05!GO:0051170;nuclear import;1.25235514787294e-05!GO:0007051;spindle organization and biogenesis;1.3339533181271e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.37172623288741e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.40159927582795e-05!GO:0016859;cis-trans isomerase activity;1.52180164460631e-05!GO:0050794;regulation of cellular process;1.54763242260234e-05!GO:0051168;nuclear export;1.75236948513122e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.77235317564858e-05!GO:0046474;glycerophospholipid biosynthetic process;2.11924324729555e-05!GO:0019222;regulation of metabolic process;2.16193510172271e-05!GO:0051246;regulation of protein metabolic process;2.23637195991057e-05!GO:0046489;phosphoinositide biosynthetic process;2.23637195991057e-05!GO:0043021;ribonucleoprotein binding;2.39680387613128e-05!GO:0016853;isomerase activity;2.69007730612117e-05!GO:0006606;protein import into nucleus;2.83533123810843e-05!GO:0043681;protein import into mitochondrion;3.24713801816379e-05!GO:0004518;nuclease activity;3.49917154621896e-05!GO:0006091;generation of precursor metabolites and energy;3.59939844899649e-05!GO:0000079;regulation of cyclin-dependent protein kinase activity;4.09784601894507e-05!GO:0051052;regulation of DNA metabolic process;4.09784601894507e-05!GO:0006612;protein targeting to membrane;4.3431141295832e-05!GO:0006520;amino acid metabolic process;4.46038405824237e-05!GO:0042981;regulation of apoptosis;4.58917337318464e-05!GO:0006310;DNA recombination;5.20238626300216e-05!GO:0004527;exonuclease activity;5.20238626300216e-05!GO:0016563;transcription activator activity;5.24147089211568e-05!GO:0043067;regulation of programmed cell death;5.38065052236181e-05!GO:0015980;energy derivation by oxidation of organic compounds;5.42905748162035e-05!GO:0005798;Golgi-associated vesicle;6.30672801097125e-05!GO:0048471;perinuclear region of cytoplasm;6.45061096761564e-05!GO:0003682;chromatin binding;6.8060476949533e-05!GO:0000049;tRNA binding;6.95970831675638e-05!GO:0019752;carboxylic acid metabolic process;8.54489204031661e-05!GO:0051789;response to protein stimulus;8.54489204031661e-05!GO:0006986;response to unfolded protein;8.54489204031661e-05!GO:0031324;negative regulation of cellular metabolic process;9.0931240144713e-05!GO:0006352;transcription initiation;0.000100563984442765!GO:0046483;heterocycle metabolic process;0.000100732283526407!GO:0006082;organic acid metabolic process;0.000101883116437351!GO:0045454;cell redox homeostasis;0.000109551362103646!GO:0009165;nucleotide biosynthetic process;0.000117786498976578!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00012490820423133!GO:0016564;transcription repressor activity;0.000130256741992336!GO:0030880;RNA polymerase complex;0.000130546559097805!GO:0043069;negative regulation of programmed cell death;0.000130546559097805!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000145694215040094!GO:0006383;transcription from RNA polymerase III promoter;0.000157555559272178!GO:0006916;anti-apoptosis;0.000160690658423613!GO:0043066;negative regulation of apoptosis;0.000167041667854821!GO:0031497;chromatin assembly;0.00017033318377866!GO:0016363;nuclear matrix;0.000173526495564613!GO:0003678;DNA helicase activity;0.000189426656227626!GO:0006334;nucleosome assembly;0.000193165305866139!GO:0008186;RNA-dependent ATPase activity;0.00019830092049461!GO:0000776;kinetochore;0.000205115082275938!GO:0030867;rough endoplasmic reticulum membrane;0.000223952718837862!GO:0030384;phosphoinositide metabolic process;0.000247362274095086!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000249531394171172!GO:0015399;primary active transmembrane transporter activity;0.000249531394171172!GO:0006506;GPI anchor biosynthetic process;0.000271656126302425!GO:0006650;glycerophospholipid metabolic process;0.000273196542606035!GO:0005770;late endosome;0.00027865148802104!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00027869419729646!GO:0000428;DNA-directed RNA polymerase complex;0.00027869419729646!GO:0031072;heat shock protein binding;0.00028898749412425!GO:0045786;negative regulation of progression through cell cycle;0.00029036088086405!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000290450333351962!GO:0008652;amino acid biosynthetic process;0.000313882832500416!GO:0031970;organelle envelope lumen;0.000323377706721107!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000342427098148891!GO:0006289;nucleotide-excision repair;0.000355554146435666!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00037324956958306!GO:0006402;mRNA catabolic process;0.000379758398275496!GO:0006611;protein export from nucleus;0.000382864784901303!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000401530700516226!GO:0000096;sulfur amino acid metabolic process;0.00042341319645759!GO:0005048;signal sequence binding;0.00044052124691127!GO:0006505;GPI anchor metabolic process;0.00044052124691127!GO:0000082;G1/S transition of mitotic cell cycle;0.000495412707639225!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000500631062279298!GO:0043596;nuclear replication fork;0.000504394739453018!GO:0019867;outer membrane;0.000522878453975505!GO:0005758;mitochondrial intermembrane space;0.000534182239431576!GO:0003729;mRNA binding;0.00054201772416566!GO:0051920;peroxiredoxin activity;0.000564431014979793!GO:0005791;rough endoplasmic reticulum;0.000565262982738841!GO:0007006;mitochondrial membrane organization and biogenesis;0.000565262982738841!GO:0004004;ATP-dependent RNA helicase activity;0.000575664508755388!GO:0044440;endosomal part;0.000634529929491363!GO:0010008;endosome membrane;0.000634529929491363!GO:0005684;U2-dependent spliceosome;0.000647307230351998!GO:0048523;negative regulation of cellular process;0.000675531188238831!GO:0006284;base-excision repair;0.000682840561605204!GO:0016251;general RNA polymerase II transcription factor activity;0.000697708101582446!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000713814891263841!GO:0000059;protein import into nucleus, docking;0.000732515056970937!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000753810844237767!GO:0009892;negative regulation of metabolic process;0.000758510251037064!GO:0003924;GTPase activity;0.000758949370836957!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000779262220631129!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000779262220631129!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000779262220631129!GO:0030663;COPI coated vesicle membrane;0.000781080606255784!GO:0030126;COPI vesicle coat;0.000781080606255784!GO:0006270;DNA replication initiation;0.000781699428930799!GO:0031323;regulation of cellular metabolic process;0.000798557337216717!GO:0003711;transcription elongation regulator activity;0.000812800445762576!GO:0019843;rRNA binding;0.000863266959920745!GO:0006519;amino acid and derivative metabolic process;0.000864961155449882!GO:0032508;DNA duplex unwinding;0.000870294835640174!GO:0032392;DNA geometric change;0.000870294835640174!GO:0009451;RNA modification;0.000870834154240579!GO:0048500;signal recognition particle;0.000875163804690113!GO:0031968;organelle outer membrane;0.000877365149491815!GO:0003714;transcription corepressor activity;0.000882860116611631!GO:0006401;RNA catabolic process;0.000922019802883624!GO:0000228;nuclear chromosome;0.000934425265767451!GO:0007052;mitotic spindle organization and biogenesis;0.00105293242470815!GO:0048037;cofactor binding;0.00105534458805245!GO:0005741;mitochondrial outer membrane;0.0010748454432669!GO:0008022;protein C-terminus binding;0.00109060910854339!GO:0043284;biopolymer biosynthetic process;0.00111853560593161!GO:0008408;3'-5' exonuclease activity;0.00116055425133552!GO:0008312;7S RNA binding;0.00116576142597587!GO:0030176;integral to endoplasmic reticulum membrane;0.00118735990585794!GO:0050662;coenzyme binding;0.00121913502469209!GO:0051252;regulation of RNA metabolic process;0.00133149261860958!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00136555651027928!GO:0035258;steroid hormone receptor binding;0.00147238818658161!GO:0015631;tubulin binding;0.00156403131782982!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00156609751964699!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00160791316045632!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00160791316045632!GO:0042802;identical protein binding;0.00160864439651641!GO:0006350;transcription;0.00162655170655996!GO:0044431;Golgi apparatus part;0.00169734373631282!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00171968358531033!GO:0006275;regulation of DNA replication;0.00173238717106209!GO:0033116;ER-Golgi intermediate compartment membrane;0.00178083511070003!GO:0009112;nucleobase metabolic process;0.00184738973513813!GO:0030137;COPI-coated vesicle;0.00189531969503728!GO:0043601;nuclear replisome;0.00191387812965161!GO:0030894;replisome;0.00191387812965161!GO:0006818;hydrogen transport;0.00208673891502829!GO:0015992;proton transport;0.00211119474197025!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00222106622032208!GO:0045047;protein targeting to ER;0.00222106622032208!GO:0006891;intra-Golgi vesicle-mediated transport;0.00229040208444379!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00232451573085678!GO:0048487;beta-tubulin binding;0.00234828723791533!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00241860298406979!GO:0006400;tRNA modification;0.00242417808597984!GO:0051087;chaperone binding;0.00257787866822013!GO:0043414;biopolymer methylation;0.00259147199571089!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00268605505380819!GO:0031124;mRNA 3'-end processing;0.00269670588200637!GO:0007059;chromosome segregation;0.00279904002075411!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00281293791213437!GO:0019899;enzyme binding;0.00290542294672475!GO:0005876;spindle microtubule;0.00294551068590148!GO:0046983;protein dimerization activity;0.00294819612381524!GO:0006793;phosphorus metabolic process;0.00300643770435297!GO:0006796;phosphate metabolic process;0.00300643770435297!GO:0005769;early endosome;0.00304977619433256!GO:0004532;exoribonuclease activity;0.00312255410209652!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00312255410209652!GO:0032259;methylation;0.00326199429989041!GO:0031252;leading edge;0.00326648372193877!GO:0008320;protein transmembrane transporter activity;0.00327415347110023!GO:0006268;DNA unwinding during replication;0.00344438155408057!GO:0046467;membrane lipid biosynthetic process;0.00345556618585385!GO:0000178;exosome (RNase complex);0.00347572199802632!GO:0005669;transcription factor TFIID complex;0.00348734890214689!GO:0051287;NAD binding;0.00349739635440372!GO:0050789;regulation of biological process;0.00354443189215706!GO:0000086;G2/M transition of mitotic cell cycle;0.00355250280321128!GO:0030521;androgen receptor signaling pathway;0.00360131731780389!GO:0042770;DNA damage response, signal transduction;0.00360583929954048!GO:0043492;ATPase activity, coupled to movement of substances;0.00362087567629556!GO:0000097;sulfur amino acid biosynthetic process;0.00363655645168929!GO:0005525;GTP binding;0.00371146303126682!GO:0007088;regulation of mitosis;0.00383836790203249!GO:0016481;negative regulation of transcription;0.00386697093361834!GO:0046966;thyroid hormone receptor binding;0.00392337015999331!GO:0030658;transport vesicle membrane;0.00392337015999331!GO:0003702;RNA polymerase II transcription factor activity;0.00399547901532287!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00411692275469543!GO:0030118;clathrin coat;0.00414961486948593!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.00419186312948135!GO:0008180;signalosome;0.00420235114198243!GO:0006497;protein amino acid lipidation;0.00424731803878453!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00430229864361833!GO:0005773;vacuole;0.00434437844159124!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0043522857496211!GO:0008250;oligosaccharyl transferase complex;0.0044720538996416!GO:0042393;histone binding;0.00453008282023797!GO:0030132;clathrin coat of coated pit;0.00461326259195279!GO:0031988;membrane-bound vesicle;0.00461326259195279!GO:0006405;RNA export from nucleus;0.00468146936563323!GO:0051539;4 iron, 4 sulfur cluster binding;0.00476623741977192!GO:0000922;spindle pole;0.00477221108045717!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00481891600446306!GO:0003725;double-stranded RNA binding;0.00487567959026181!GO:0006595;polyamine metabolic process;0.00488527406990623!GO:0003746;translation elongation factor activity;0.00493394493650666!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00499829417865926!GO:0016272;prefoldin complex;0.00513322915837283!GO:0032200;telomere organization and biogenesis;0.00528261364904893!GO:0000723;telomere maintenance;0.00528261364904893!GO:0043022;ribosome binding;0.00530450051162175!GO:0016023;cytoplasmic membrane-bound vesicle;0.00537422629212629!GO:0005637;nuclear inner membrane;0.00538074179305362!GO:0065009;regulation of a molecular function;0.00540157198465809!GO:0004576;oligosaccharyl transferase activity;0.00548484741487402!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.00548646797419959!GO:0006378;mRNA polyadenylation;0.00572188193737889!GO:0007034;vacuolar transport;0.00575019607019906!GO:0016788;hydrolase activity, acting on ester bonds;0.00590405710398076!GO:0010468;regulation of gene expression;0.00607890593858675!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00616495505621999!GO:0006144;purine base metabolic process;0.00622026970542531!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0062446819522831!GO:0008276;protein methyltransferase activity;0.00626507253837672!GO:0048519;negative regulation of biological process;0.00626631896582046!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.00630180676946195!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00650047492565112!GO:0009116;nucleoside metabolic process;0.00662023719456525!GO:0050681;androgen receptor binding;0.00666073048307273!GO:0043488;regulation of mRNA stability;0.00690554924876842!GO:0043487;regulation of RNA stability;0.00690554924876842!GO:0031123;RNA 3'-end processing;0.00692163823699444!GO:0031570;DNA integrity checkpoint;0.00731415994134964!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00743053165492633!GO:0015002;heme-copper terminal oxidase activity;0.00743053165492633!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00743053165492633!GO:0004129;cytochrome-c oxidase activity;0.00743053165492633!GO:0030660;Golgi-associated vesicle membrane;0.00754988721460775!GO:0000339;RNA cap binding;0.00768793262402509!GO:0005905;coated pit;0.00783166159912607!GO:0000139;Golgi membrane;0.00793940019636688!GO:0006376;mRNA splice site selection;0.00794760748716002!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00794760748716002!GO:0051540;metal cluster binding;0.00810765169981783!GO:0051536;iron-sulfur cluster binding;0.00810765169981783!GO:0006007;glucose catabolic process;0.00810765169981783!GO:0009303;rRNA transcription;0.00847241664367468!GO:0007093;mitotic cell cycle checkpoint;0.00857118316973381!GO:0006220;pyrimidine nucleotide metabolic process;0.00865699653834291!GO:0009124;nucleoside monophosphate biosynthetic process;0.00879673540486946!GO:0009123;nucleoside monophosphate metabolic process;0.00879673540486946!GO:0007017;microtubule-based process;0.00883102807145513!GO:0008097;5S rRNA binding;0.00894103419452695!GO:0016310;phosphorylation;0.00944724403219609!GO:0000781;chromosome, telomeric region;0.00965973030949093!GO:0043433;negative regulation of transcription factor activity;0.00969989514436331!GO:0005832;chaperonin-containing T-complex;0.00998527912608054!GO:0022406;membrane docking;0.0111532444053728!GO:0048278;vesicle docking;0.0111532444053728!GO:0006950;response to stress;0.011154369587685!GO:0030134;ER to Golgi transport vesicle;0.0111774484958667!GO:0030433;ER-associated protein catabolic process;0.0112554821486851!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0112554821486851!GO:0009067;aspartate family amino acid biosynthetic process;0.0115662749054992!GO:0006541;glutamine metabolic process;0.0116171593579867!GO:0022890;inorganic cation transmembrane transporter activity;0.0116532705372579!GO:0031982;vesicle;0.0119052447760687!GO:0000725;recombinational repair;0.0119052447760687!GO:0000724;double-strand break repair via homologous recombination;0.0119052447760687!GO:0042158;lipoprotein biosynthetic process;0.0123074213735705!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0123725336304721!GO:0045039;protein import into mitochondrial inner membrane;0.0123725336304721!GO:0040029;regulation of gene expression, epigenetic;0.012399267592932!GO:0000323;lytic vacuole;0.012399267592932!GO:0005764;lysosome;0.012399267592932!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0126658832653985!GO:0005869;dynactin complex;0.0134065959539243!GO:0005885;Arp2/3 protein complex;0.0137275135506788!GO:0008632;apoptotic program;0.0137878281602937!GO:0006904;vesicle docking during exocytosis;0.013915717281563!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0142522101925842!GO:0019783;small conjugating protein-specific protease activity;0.0144484955589826!GO:0004003;ATP-dependent DNA helicase activity;0.0148403321641439!GO:0031410;cytoplasmic vesicle;0.0150848774294726!GO:0030127;COPII vesicle coat;0.0152346022465445!GO:0012507;ER to Golgi transport vesicle membrane;0.0152346022465445!GO:0008017;microtubule binding;0.0153474402578836!GO:0003887;DNA-directed DNA polymerase activity;0.0154316519976631!GO:0051053;negative regulation of DNA metabolic process;0.0154316519976631!GO:0009161;ribonucleoside monophosphate metabolic process;0.0155497442736189!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0155497442736189!GO:0000152;nuclear ubiquitin ligase complex;0.015609036336335!GO:0043624;cellular protein complex disassembly;0.015690221816479!GO:0008361;regulation of cell size;0.0157438182934649!GO:0007050;cell cycle arrest;0.0160429546930824!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.016119763928859!GO:0003677;DNA binding;0.0164389907189666!GO:0008234;cysteine-type peptidase activity;0.016493340653109!GO:0030119;AP-type membrane coat adaptor complex;0.0166606485756537!GO:0000175;3'-5'-exoribonuclease activity;0.0168813347540273!GO:0009070;serine family amino acid biosynthetic process;0.0169291299594053!GO:0032774;RNA biosynthetic process;0.0170445312143736!GO:0005874;microtubule;0.017113219386287!GO:0008139;nuclear localization sequence binding;0.0172696727186586!GO:0008601;protein phosphatase type 2A regulator activity;0.0173083931684308!GO:0005850;eukaryotic translation initiation factor 2 complex;0.017407641453367!GO:0006118;electron transport;0.0174750370232034!GO:0005663;DNA replication factor C complex;0.0175120236129864!GO:0006730;one-carbon compound metabolic process;0.0176908275964802!GO:0046112;nucleobase biosynthetic process;0.0177928961338131!GO:0007004;telomere maintenance via telomerase;0.017813609826569!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0179765246709139!GO:0032561;guanyl ribonucleotide binding;0.0185148914586946!GO:0019001;guanyl nucleotide binding;0.0185148914586946!GO:0006984;ER-nuclear signaling pathway;0.0185650753536098!GO:0009066;aspartate family amino acid metabolic process;0.0185650753536098!GO:0006417;regulation of translation;0.0186594665620646!GO:0016049;cell growth;0.0189213083037238!GO:0004087;carbamoyl-phosphate synthase (ammonia) activity;0.0190113719601929!GO:0030131;clathrin adaptor complex;0.0190113719601929!GO:0004536;deoxyribonuclease activity;0.019125927272919!GO:0016790;thiolester hydrolase activity;0.0193207256945352!GO:0005744;mitochondrial inner membrane presequence translocase complex;0.0196874350406337!GO:0007041;lysosomal transport;0.0198012593111762!GO:0030503;regulation of cell redox homeostasis;0.0198163912339521!GO:0004843;ubiquitin-specific protease activity;0.0200097653059108!GO:0017134;fibroblast growth factor binding;0.0200097653059108!GO:0030125;clathrin vesicle coat;0.0201004623865012!GO:0030665;clathrin coated vesicle membrane;0.0201004623865012!GO:0009003;signal peptidase activity;0.0201004623865012!GO:0022884;macromolecule transmembrane transporter activity;0.0203313375264623!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0203313375264623!GO:0006351;transcription, DNA-dependent;0.0205763318674974!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0205963294896752!GO:0010257;NADH dehydrogenase complex assembly;0.0205963294896752!GO:0033108;mitochondrial respiratory chain complex assembly;0.0205963294896752!GO:0009081;branched chain family amino acid metabolic process;0.0206395305434136!GO:0051059;NF-kappaB binding;0.0207376412267024!GO:0035267;NuA4 histone acetyltransferase complex;0.0214785646784015!GO:0044262;cellular carbohydrate metabolic process;0.0217030481603824!GO:0006360;transcription from RNA polymerase I promoter;0.0221463290517787!GO:0006509;membrane protein ectodomain proteolysis;0.0222727274739966!GO:0033619;membrane protein proteolysis;0.0222727274739966!GO:0031529;ruffle organization and biogenesis;0.0224452271557607!GO:0001558;regulation of cell growth;0.0224452271557607!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0225597158806064!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0225731381614694!GO:0008536;Ran GTPase binding;0.0226751612756339!GO:0006338;chromatin remodeling;0.0228540210036431!GO:0030659;cytoplasmic vesicle membrane;0.0229161503107824!GO:0030518;steroid hormone receptor signaling pathway;0.0230404144568717!GO:0018196;peptidyl-asparagine modification;0.0230625580058207!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0230625580058207!GO:0007021;tubulin folding;0.0235310726792424!GO:0006740;NADPH regeneration;0.0236272545725709!GO:0006098;pentose-phosphate shunt;0.0236272545725709!GO:0031625;ubiquitin protein ligase binding;0.0236990836134282!GO:0032984;macromolecular complex disassembly;0.0237316396441085!GO:0044454;nuclear chromosome part;0.0238504097482855!GO:0000287;magnesium ion binding;0.0241191109437913!GO:0008287;protein serine/threonine phosphatase complex;0.0241191109437913!GO:0000030;mannosyltransferase activity;0.024303611589392!GO:0000077;DNA damage checkpoint;0.0245221985278585!GO:0046982;protein heterodimerization activity;0.0245305752282421!GO:0031326;regulation of cellular biosynthetic process;0.0254969718928299!GO:0001836;release of cytochrome c from mitochondria;0.0254969718928299!GO:0003923;GPI-anchor transamidase activity;0.0254969718928299!GO:0016255;attachment of GPI anchor to protein;0.0254969718928299!GO:0042765;GPI-anchor transamidase complex;0.0254969718928299!GO:0009308;amine metabolic process;0.0263262301268777!GO:0043631;RNA polyadenylation;0.0264756728293017!GO:0005732;small nucleolar ribonucleoprotein complex;0.0264756728293017!GO:0006807;nitrogen compound metabolic process;0.0267014786607461!GO:0016408;C-acyltransferase activity;0.0268524158166524!GO:0006733;oxidoreduction coenzyme metabolic process;0.0277682671533796!GO:0005784;translocon complex;0.0278537925033232!GO:0004221;ubiquitin thiolesterase activity;0.0281782510366139!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0285222664216284!GO:0008637;apoptotic mitochondrial changes;0.0285907179783147!GO:0045892;negative regulation of transcription, DNA-dependent;0.0287576799098276!GO:0005996;monosaccharide metabolic process;0.0287576799098276!GO:0004300;enoyl-CoA hydratase activity;0.0291459580712791!GO:0004540;ribonuclease activity;0.0304418565096817!GO:0016407;acetyltransferase activity;0.0306256113662937!GO:0033673;negative regulation of kinase activity;0.0306256113662937!GO:0006469;negative regulation of protein kinase activity;0.0306256113662937!GO:0031647;regulation of protein stability;0.0313664855327646!GO:0050811;GABA receptor binding;0.0314474892468157!GO:0019318;hexose metabolic process;0.0317807006646383!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0320306295193169!GO:0006596;polyamine biosynthetic process;0.0323164605534453!GO:0007030;Golgi organization and biogenesis;0.0327732633450042!GO:0000786;nucleosome;0.0338028693803417!GO:0000726;non-recombinational repair;0.0341417565119707!GO:0008156;negative regulation of DNA replication;0.0353575938030661!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0354861087409374!GO:0043189;H4/H2A histone acetyltransferase complex;0.0355356933449528!GO:0004523;ribonuclease H activity;0.0356724012866583!GO:0006564;L-serine biosynthetic process;0.0358441531250955!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0358501427948434!GO:0044450;microtubule organizing center part;0.0360755767286232!GO:0043241;protein complex disassembly;0.0362393113850478!GO:0004520;endodeoxyribonuclease activity;0.0362852008107287!GO:0016884;carbon-nitrogen ligase activity, with glutamine as amido-N-donor;0.0368305329338464!GO:0006278;RNA-dependent DNA replication;0.0368489971140786!GO:0005754;mitochondrial proton-transporting ATP synthase, catalytic core;0.0374388289195591!GO:0000275;mitochondrial proton-transporting ATP synthase complex, catalytic core F(1);0.0374388289195591!GO:0045267;proton-transporting ATP synthase, catalytic core;0.0374388289195591!GO:0004549;tRNA-specific ribonuclease activity;0.0381132072321116!GO:0004659;prenyltransferase activity;0.0381608335797869!GO:0009889;regulation of biosynthetic process;0.0381881359636468!GO:0004526;ribonuclease P activity;0.0382359736457239!GO:0030508;thiol-disulfide exchange intermediate activity;0.038474370398678!GO:0047485;protein N-terminus binding;0.0386862265606072!GO:0044438;microbody part;0.0391412318161859!GO:0044439;peroxisomal part;0.0391412318161859!GO:0006644;phospholipid metabolic process;0.0391670431686117!GO:0031902;late endosome membrane;0.0391670431686117!GO:0030133;transport vesicle;0.0392101083535432!GO:0000792;heterochromatin;0.0397778668734173!GO:0004722;protein serine/threonine phosphatase activity;0.03999427905778!GO:0042769;DNA damage response, detection of DNA damage;0.0406149547417703!GO:0045045;secretory pathway;0.0407513712844739!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0412246097441165!GO:0009396;folic acid and derivative biosynthetic process;0.0412634549645479!GO:0009113;purine base biosynthetic process;0.0415272596663832!GO:0005658;alpha DNA polymerase:primase complex;0.0417422376993054!GO:0051604;protein maturation;0.0420273013256966!GO:0016197;endosome transport;0.0425213559059975!GO:0006767;water-soluble vitamin metabolic process;0.0427386094379614!GO:0012506;vesicle membrane;0.0432747426440611!GO:0008144;drug binding;0.0435905541996808!GO:0006518;peptide metabolic process;0.0437014944581254!GO:0006006;glucose metabolic process;0.0437014944581254!GO:0006096;glycolysis;0.0440686404649202!GO:0000819;sister chromatid segregation;0.0443913765605072!GO:0051348;negative regulation of transferase activity;0.044460300252152!GO:0044433;cytoplasmic vesicle part;0.044460300252152!GO:0045736;negative regulation of cyclin-dependent protein kinase activity;0.0449684025676007!GO:0005675;holo TFIIH complex;0.0452520859964611!GO:0043154;negative regulation of caspase activity;0.0458622638581747!GO:0030968;unfolded protein response;0.046154465612024!GO:0040008;regulation of growth;0.0463202197520432!GO:0030911;TPR domain binding;0.0465315634606478!GO:0008538;proteasome activator activity;0.0469609609117521!GO:0000070;mitotic sister chromatid segregation;0.0469609609117521!GO:0050790;regulation of catalytic activity;0.0469609609117521!GO:0032507;maintenance of cellular protein localization;0.0477584613362003!GO:0006739;NADP metabolic process;0.0478745871157544!GO:0031461;cullin-RING ubiquitin ligase complex;0.0486325892498229!GO:0017166;vinculin binding;0.0487483529368605!GO:0003756;protein disulfide isomerase activity;0.0492184001730226!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0492184001730226!GO:0032404;mismatch repair complex binding;0.0494381625732115!GO:0005851;eukaryotic translation initiation factor 2B complex;0.0495109101376132!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0497214326710941 | |||
|sample_id=10552 | |sample_id=10552 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=cervix | |sample_tissue=cervix | ||
|top_motifs=ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:2.70652013438;ELK1,4_GABP{A,B1}:2.47713655955;RXR{A,B,G}_{NR1H2,PPAR}dimers:2.01756271496;bHLH_family:1.85637541977;HOX{A6,A7,B6,B7}:1.8545014033;HES1:1.76531583895;E2F1..5:1.5000281673;NKX3-1:1.44673627788;FOXQ1:1.44324465993;ZNF143:1.39383147563;HIF1A:1.29468401848;VSX1,2:1.25324464657;ATF4:1.2506000609;NRF1:1.24403632226;RORA:1.23575221103;YY1:1.12302091081;CREB1:1.09767635229;NR6A1:1.00065725925;PBX1:0.973092515075;FOXN1:0.953893110721;NR5A1,2:0.933364843341;NKX2-1,4:0.846919470493;IKZF1:0.822550161654;CEBPA,B_DDIT3:0.806726947469;TBX4,5:0.77658260588;FOX{F1,F2,J1}:0.760832477749;AHR_ARNT_ARNT2:0.742781941421;MYB:0.670556214194;EN1,2:0.639120706336;RBPJ:0.638443282057;ARID5B:0.606446526457;ESRRA:0.604341611647;CRX:0.599510958427;BREu{core}:0.59178174078;PPARG:0.581833051262;NFY{A,B,C}:0.581424802446;STAT1,3:0.575224057407;TFDP1:0.574022617564;FOX{I1,J2}:0.5580360341;PRRX1,2:0.543614237585;ELF1,2,4:0.530741584487;HOXA9_MEIS1:0.516640770286;POU1F1:0.514382478005;ATF5_CREB3:0.512749560533;PITX1..3:0.505865745894;POU2F1..3:0.477406460753;HBP1_HMGB_SSRP1_UBTF:0.430595096872;HOX{A5,B5}:0.427116582387;GFI1:0.412007267888;PDX1:0.397658609994;LHX3,4:0.343800064936;FOXP1:0.337616878256;LMO2:0.329185537877;HLF:0.326789004476;FOXM1:0.311513664815;ZBTB16:0.304923861319;EVI1:0.268192616581;LEF1_TCF7_TCF7L1,2:0.265986058165;NKX6-1,2:0.265912902834;ZEB1:0.246726828404;TEAD1:0.243435012127;HNF4A_NR2F1,2:0.228924444837;TEF:0.201132034731;PAX1,9:0.197057020576;MEF2{A,B,C,D}:0.189493328552;ADNP_IRX_SIX_ZHX:0.175005005049;NANOG:0.082240742794;BPTF:0.0725219629553;CUX2:0.0693421747757;RXR{A,B,G}:0.0683458943433;PAX3,7:0.0635026978346;PAX2:0.0588017982585;IRF7:0.0530749220206;SNAI1..3:0.0501689977962;RFX1:0.0472486868078;DBP:0.0254751885912;GATA6:0.0170529605746;TP53:0.0141136924857;OCT4_SOX2{dimer}:0.00106135823773;FOX{D1,D2}:-0.00845652578332;NR1H4:-0.0159152086131;TLX1..3_NFIC{dimer}:-0.015915477507;POU5F1:-0.0278058871346;T:-0.0281048091737;JUN:-0.0479987245362;PAX4:-0.061530607852;FOXA2:-0.0651722610302;STAT5{A,B}:-0.0776546958569;RFX2..5_RFXANK_RFXAP:-0.0844332789921;POU6F1:-0.0846906499669;NFE2:-0.106067940896;AIRE:-0.137965545512;CDX1,2,4:-0.149004907731;ATF2:-0.180961125397;NFIL3:-0.18200314664;MYBL2:-0.184808323043;ATF6:-0.186280988396;FOXD3:-0.1890678855;ZNF423:-0.194285440222;TOPORS:-0.212788199299;SOX2:-0.219320694736;HMGA1,2:-0.221175858341;FOXL1:-0.237945008818;NFE2L2:-0.238194081158;HNF1A:-0.247554160708;PAX8:-0.250290488556;IRF1,2:-0.255802439471;HOX{A4,D4}:-0.260526251413;MAFB:-0.262008011744;GLI1..3:-0.279720382073;GTF2A1,2:-0.285174670908;SOX{8,9,10}:-0.296331481648;BACH2:-0.302250096498;SOX5:-0.303523533497;IKZF2:-0.30763114155;FOS_FOS{B,L1}_JUN{B,D}:-0.31756787509;NKX2-3_NKX2-5:-0.319887522889;ZNF148:-0.326017404296;CDC5L:-0.333554508143;ZBTB6:-0.341418572763;FOXO1,3,4:-0.359748307656;MYOD1:-0.360375540933;STAT2,4,6:-0.361653790698;ZFP161:-0.381963477838;NFE2L1:-0.396866279364;HIC1:-0.402793491619;NR3C1:-0.412457427496;NFKB1_REL_RELA:-0.422812811458;MTF1:-0.432117457562;FOXP3:-0.469020430037;AR:-0.472571998159;ZNF384:-0.480703567716;SPIB:-0.482777065946;FOSL2:-0.483572421454;DMAP1_NCOR{1,2}_SMARC:-0.494129787081;NKX3-2:-0.520250234445;PAX5:-0.528424398887;EBF1:-0.53878934472;XBP1:-0.541211097972;MED-1{core}:-0.551710942317;REST:-0.553761695047;HAND1,2:-0.564215725029;RXRA_VDR{dimer}:-0.564670489789;GZF1:-0.565188237976;SREBF1,2:-0.568376954334;RUNX1..3:-0.575382708857;NKX2-2,8:-0.575923393895;SPI1:-0.579228150354;MTE{core}:-0.580224096752;EP300:-0.585592832095;KLF4:-0.612880190383;GTF2I:-0.616432956061;UFEwm:-0.639599749093;NHLH1,2:-0.667920686794;NFIX:-0.676715924569;ETS1,2:-0.68646579117;TAL1_TCF{3,4,12}:-0.700711534649;ESR1:-0.728090326509;GFI1B:-0.730193323315;TFAP2{A,C}:-0.734062994595;GCM1,2:-0.746688062952;ONECUT1,2:-0.75327221215;ALX4:-0.767083196553;SRF:-0.792301696047;TFAP2B:-0.799940491682;RREB1:-0.833187375145;HSF1,2:-0.857240426245;SOX17:-0.873492247962;MAZ:-0.887112420934;TBP:-0.911237320166;PRDM1:-0.911877158544;POU3F1..4:-0.912304968674;MYFfamily:-0.997442687091;PATZ1:-1.0176501573;ZNF238:-1.02519501217;EGR1..3:-1.0418087735;ALX1:-1.04396416462;MZF1:-1.09396693022;PAX6:-1.11266399213;TLX2:-1.11455716278;TGIF1:-1.11954784659;NFATC1..3:-1.13260615601;SP1:-1.16124136206;XCPE1{core}:-1.19671531234;ZIC1..3:-1.29814853282;GATA4:-1.38233522178;NANOG{mouse}:-1.44273104423;TFCP2:-1.58941646746;SMAD1..7,9:-1.61436912623;HMX1:-1.73308112872;TFAP4:-2.0746764094;SPZ1:-2.49989115833 | |top_motifs=ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:2.70652013438;ELK1,4_GABP{A,B1}:2.47713655955;RXR{A,B,G}_{NR1H2,PPAR}dimers:2.01756271496;bHLH_family:1.85637541977;HOX{A6,A7,B6,B7}:1.8545014033;HES1:1.76531583895;E2F1..5:1.5000281673;NKX3-1:1.44673627788;FOXQ1:1.44324465993;ZNF143:1.39383147563;HIF1A:1.29468401848;VSX1,2:1.25324464657;ATF4:1.2506000609;NRF1:1.24403632226;RORA:1.23575221103;YY1:1.12302091081;CREB1:1.09767635229;NR6A1:1.00065725925;PBX1:0.973092515075;FOXN1:0.953893110721;NR5A1,2:0.933364843341;NKX2-1,4:0.846919470493;IKZF1:0.822550161654;CEBPA,B_DDIT3:0.806726947469;TBX4,5:0.77658260588;FOX{F1,F2,J1}:0.760832477749;AHR_ARNT_ARNT2:0.742781941421;MYB:0.670556214194;EN1,2:0.639120706336;RBPJ:0.638443282057;ARID5B:0.606446526457;ESRRA:0.604341611647;CRX:0.599510958427;BREu{core}:0.59178174078;PPARG:0.581833051262;NFY{A,B,C}:0.581424802446;STAT1,3:0.575224057407;TFDP1:0.574022617564;FOX{I1,J2}:0.5580360341;PRRX1,2:0.543614237585;ELF1,2,4:0.530741584487;HOXA9_MEIS1:0.516640770286;POU1F1:0.514382478005;ATF5_CREB3:0.512749560533;PITX1..3:0.505865745894;POU2F1..3:0.477406460753;HBP1_HMGB_SSRP1_UBTF:0.430595096872;HOX{A5,B5}:0.427116582387;GFI1:0.412007267888;PDX1:0.397658609994;LHX3,4:0.343800064936;FOXP1:0.337616878256;LMO2:0.329185537877;HLF:0.326789004476;FOXM1:0.311513664815;ZBTB16:0.304923861319;EVI1:0.268192616581;LEF1_TCF7_TCF7L1,2:0.265986058165;NKX6-1,2:0.265912902834;ZEB1:0.246726828404;TEAD1:0.243435012127;HNF4A_NR2F1,2:0.228924444837;TEF:0.201132034731;PAX1,9:0.197057020576;MEF2{A,B,C,D}:0.189493328552;ADNP_IRX_SIX_ZHX:0.175005005049;NANOG:0.082240742794;BPTF:0.0725219629553;CUX2:0.0693421747757;RXR{A,B,G}:0.0683458943433;PAX3,7:0.0635026978346;PAX2:0.0588017982585;IRF7:0.0530749220206;SNAI1..3:0.0501689977962;RFX1:0.0472486868078;DBP:0.0254751885912;GATA6:0.0170529605746;TP53:0.0141136924857;OCT4_SOX2{dimer}:0.00106135823773;FOX{D1,D2}:-0.00845652578332;NR1H4:-0.0159152086131;TLX1..3_NFIC{dimer}:-0.015915477507;POU5F1:-0.0278058871346;T:-0.0281048091737;JUN:-0.0479987245362;PAX4:-0.061530607852;FOXA2:-0.0651722610302;STAT5{A,B}:-0.0776546958569;RFX2..5_RFXANK_RFXAP:-0.0844332789921;POU6F1:-0.0846906499669;NFE2:-0.106067940896;AIRE:-0.137965545512;CDX1,2,4:-0.149004907731;ATF2:-0.180961125397;NFIL3:-0.18200314664;MYBL2:-0.184808323043;ATF6:-0.186280988396;FOXD3:-0.1890678855;ZNF423:-0.194285440222;TOPORS:-0.212788199299;SOX2:-0.219320694736;HMGA1,2:-0.221175858341;FOXL1:-0.237945008818;NFE2L2:-0.238194081158;HNF1A:-0.247554160708;PAX8:-0.250290488556;IRF1,2:-0.255802439471;HOX{A4,D4}:-0.260526251413;MAFB:-0.262008011744;GLI1..3:-0.279720382073;GTF2A1,2:-0.285174670908;SOX{8,9,10}:-0.296331481648;BACH2:-0.302250096498;SOX5:-0.303523533497;IKZF2:-0.30763114155;FOS_FOS{B,L1}_JUN{B,D}:-0.31756787509;NKX2-3_NKX2-5:-0.319887522889;ZNF148:-0.326017404296;CDC5L:-0.333554508143;ZBTB6:-0.341418572763;FOXO1,3,4:-0.359748307656;MYOD1:-0.360375540933;STAT2,4,6:-0.361653790698;ZFP161:-0.381963477838;NFE2L1:-0.396866279364;HIC1:-0.402793491619;NR3C1:-0.412457427496;NFKB1_REL_RELA:-0.422812811458;MTF1:-0.432117457562;FOXP3:-0.469020430037;AR:-0.472571998159;ZNF384:-0.480703567716;SPIB:-0.482777065946;FOSL2:-0.483572421454;DMAP1_NCOR{1,2}_SMARC:-0.494129787081;NKX3-2:-0.520250234445;PAX5:-0.528424398887;EBF1:-0.53878934472;XBP1:-0.541211097972;MED-1{core}:-0.551710942317;REST:-0.553761695047;HAND1,2:-0.564215725029;RXRA_VDR{dimer}:-0.564670489789;GZF1:-0.565188237976;SREBF1,2:-0.568376954334;RUNX1..3:-0.575382708857;NKX2-2,8:-0.575923393895;SPI1:-0.579228150354;MTE{core}:-0.580224096752;EP300:-0.585592832095;KLF4:-0.612880190383;GTF2I:-0.616432956061;UFEwm:-0.639599749093;NHLH1,2:-0.667920686794;NFIX:-0.676715924569;ETS1,2:-0.68646579117;TAL1_TCF{3,4,12}:-0.700711534649;ESR1:-0.728090326509;GFI1B:-0.730193323315;TFAP2{A,C}:-0.734062994595;GCM1,2:-0.746688062952;ONECUT1,2:-0.75327221215;ALX4:-0.767083196553;SRF:-0.792301696047;TFAP2B:-0.799940491682;RREB1:-0.833187375145;HSF1,2:-0.857240426245;SOX17:-0.873492247962;MAZ:-0.887112420934;TBP:-0.911237320166;PRDM1:-0.911877158544;POU3F1..4:-0.912304968674;MYFfamily:-0.997442687091;PATZ1:-1.0176501573;ZNF238:-1.02519501217;EGR1..3:-1.0418087735;ALX1:-1.04396416462;MZF1:-1.09396693022;PAX6:-1.11266399213;TLX2:-1.11455716278;TGIF1:-1.11954784659;NFATC1..3:-1.13260615601;SP1:-1.16124136206;XCPE1{core}:-1.19671531234;ZIC1..3:-1.29814853282;GATA4:-1.38233522178;NANOG{mouse}:-1.44273104423;TFCP2:-1.58941646746;SMAD1..7,9:-1.61436912623;HMX1:-1.73308112872;TFAP4:-2.0746764094;SPZ1:-2.49989115833 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10552-107I3;search_select_hide=table117:FF:10552-107I3 | |||
}} | }} | ||
Latest revision as of 14:29, 3 June 2020
| Name: | cervical cancer cell line:D98-AH2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11288 |
| Sample type: | cell lines |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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| HumanCAGEScan Download raw sequence, BAM & CTSS | |||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11288
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11288
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.256 |
| 10 | 10 | 0.115 |
| 100 | 100 | 0.0552 |
| 101 | 101 | 0.285 |
| 102 | 102 | 0.643 |
| 103 | 103 | 0.251 |
| 104 | 104 | 0.664 |
| 105 | 105 | 0.698 |
| 106 | 106 | 6.21234e-4 |
| 107 | 107 | 0.00433 |
| 108 | 108 | 0.324 |
| 109 | 109 | 0.0429 |
| 11 | 11 | 0.654 |
| 110 | 110 | 0.421 |
| 111 | 111 | 0.406 |
| 112 | 112 | 0.0783 |
| 113 | 113 | 0.0304 |
| 114 | 114 | 0.721 |
| 115 | 115 | 0.297 |
| 116 | 116 | 0.762 |
| 117 | 117 | 0.129 |
| 118 | 118 | 0.632 |
| 119 | 119 | 0.607 |
| 12 | 12 | 0.512 |
| 120 | 120 | 0.98 |
| 121 | 121 | 0.942 |
| 122 | 122 | 0.198 |
| 123 | 123 | 0.621 |
| 124 | 124 | 0.775 |
| 125 | 125 | 0.642 |
| 126 | 126 | 0.894 |
| 127 | 127 | 0.902 |
| 128 | 128 | 2.78366e-4 |
| 129 | 129 | 0.654 |
| 13 | 13 | 9.55915e-5 |
| 130 | 130 | 0.84 |
| 131 | 131 | 0.312 |
| 132 | 132 | 0.525 |
| 133 | 133 | 0.00154 |
| 134 | 134 | 0.586 |
| 135 | 135 | 0.0687 |
| 136 | 136 | 0.088 |
| 137 | 137 | 0.185 |
| 138 | 138 | 0.913 |
| 139 | 139 | 0.92 |
| 14 | 14 | 0.581 |
| 140 | 140 | 0.0716 |
| 141 | 141 | 0.811 |
| 142 | 142 | 0.346 |
| 143 | 143 | 0.0114 |
| 144 | 144 | 0.147 |
| 145 | 145 | 0.0353 |
| 146 | 146 | 0.922 |
| 147 | 147 | 0.579 |
| 148 | 148 | 0.871 |
| 149 | 149 | 0.536 |
| 15 | 15 | 0.952 |
| 150 | 150 | 0.962 |
| 151 | 151 | 0.765 |
| 152 | 152 | 0.04 |
| 153 | 153 | 0.465 |
| 154 | 154 | 0.329 |
| 155 | 155 | 0.671 |
| 156 | 156 | 0.412 |
| 157 | 157 | 0.675 |
| 158 | 158 | 0.555 |
| 159 | 159 | 0.111 |
| 16 | 16 | 0.485 |
| 160 | 160 | 0.407 |
| 161 | 161 | 0.596 |
| 162 | 162 | 0.966 |
| 163 | 163 | 0.527 |
| 164 | 164 | 0.0232 |
| 165 | 165 | 0.681 |
| 166 | 166 | 0.066 |
| 167 | 167 | 0.0594 |
| 168 | 168 | 0.847 |
| 169 | 169 | 0.671 |
| 17 | 17 | 0.54 |
| 18 | 18 | 0.645 |
| 19 | 19 | 0.321 |
| 2 | 2 | 0.116 |
| 20 | 20 | 0.0391 |
| 21 | 21 | 0.641 |
| 22 | 22 | 0.661 |
| 23 | 23 | 0.00438 |
| 24 | 24 | 0.175 |
| 25 | 25 | 0.404 |
| 26 | 26 | 0.698 |
| 27 | 27 | 0.235 |
| 28 | 28 | 0.816 |
| 29 | 29 | 0.0194 |
| 3 | 3 | 0.791 |
| 30 | 30 | 0.277 |
| 31 | 31 | 0.416 |
| 32 | 32 | 0.165 |
| 33 | 33 | 0.0801 |
| 34 | 34 | 0.191 |
| 35 | 35 | 0.871 |
| 36 | 36 | 0.0379 |
| 37 | 37 | 0.753 |
| 38 | 38 | 0.577 |
| 39 | 39 | 0.318 |
| 4 | 4 | 0.511 |
| 40 | 40 | 0.105 |
| 41 | 41 | 0.085 |
| 42 | 42 | 0.326 |
| 43 | 43 | 0.248 |
| 44 | 44 | 0.46 |
| 45 | 45 | 0.109 |
| 46 | 46 | 0.398 |
| 47 | 47 | 0.486 |
| 48 | 48 | 0.751 |
| 49 | 49 | 0.584 |
| 5 | 5 | 0.399 |
| 50 | 50 | 0.994 |
| 51 | 51 | 0.343 |
| 52 | 52 | 0.045 |
| 53 | 53 | 0.437 |
| 54 | 54 | 0.511 |
| 55 | 55 | 0.197 |
| 56 | 56 | 0.573 |
| 57 | 57 | 0.419 |
| 58 | 58 | 0.917 |
| 59 | 59 | 0.146 |
| 6 | 6 | 0.316 |
| 60 | 60 | 0.186 |
| 61 | 61 | 0.0463 |
| 62 | 62 | 0.842 |
| 63 | 63 | 0.883 |
| 64 | 64 | 0.924 |
| 65 | 65 | 0.274 |
| 66 | 66 | 0.164 |
| 67 | 67 | 0.854 |
| 68 | 68 | 0.668 |
| 69 | 69 | 0.214 |
| 7 | 7 | 0.0831 |
| 70 | 70 | 0.481 |
| 71 | 71 | 0.141 |
| 72 | 72 | 0.677 |
| 73 | 73 | 0.738 |
| 74 | 74 | 0.137 |
| 75 | 75 | 0.0449 |
| 76 | 76 | 0.274 |
| 77 | 77 | 0.502 |
| 78 | 78 | 0.361 |
| 79 | 79 | 0.0708 |
| 8 | 8 | 0.863 |
| 80 | 80 | 0.497 |
| 81 | 81 | 0.601 |
| 82 | 82 | 0.259 |
| 83 | 83 | 0.821 |
| 84 | 84 | 0.312 |
| 85 | 85 | 0.0193 |
| 86 | 86 | 0.568 |
| 87 | 87 | 0.34 |
| 88 | 88 | 0.983 |
| 89 | 89 | 0.538 |
| 9 | 9 | 0.208 |
| 90 | 90 | 0.369 |
| 91 | 91 | 0.00135 |
| 92 | 92 | 0.181 |
| 93 | 93 | 0.941 |
| 94 | 94 | 0.961 |
| 95 | 95 | 0.23 |
| 96 | 96 | 0.457 |
| 97 | 97 | 0.774 |
| 98 | 98 | 0.967 |
| 99 | 99 | 0.517 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11288
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0101967 cervical cancer cell line sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
120 (female reproductive organ cancer)
4362 (cervical cancer)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000002 (uterine cervix)
0000995 (uterus)
0003134 (female reproductive organ)
0001560 (neck of organ)
0005156 (reproductive structure)
0000064 (organ part)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0003975 (internal female genitalia)
0004175 (internal genitalia)
0010317 (germ layer / neural crest derived structure)
0003100 (female organism)
0000474 (female reproductive system)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0101967 (cervical cancer cell line sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0010316 (germ layer / neural crest)
