FF:10569-108B2: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@SAMD00004740 | |||
|accession_numbers=CAGE;DRX007915;DRR008787;DRZ000212;DRZ001597;DRZ011562;DRZ012947 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000995,UBERON:0003134,UBERON:0005156,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0003975,UBERON:0004175,UBERON:0010317,UBERON:0003100,UBERON:0000474 | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000995,UBERON:0003134,UBERON:0005156,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0003975,UBERON:0004175,UBERON:0010317,UBERON:0003100,UBERON:0000474 | ||
|ancestors_in_cell_lineage_facet=CL:0000000 | |ancestors_in_cell_lineage_facet=CL:0000000 | ||
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase= | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr4:174451370..174451387,-!p1@HAND2!1.91!80.36!HAND2;;chr2:19558373..19558392,-!p1@OSR1!1.69!126.52!OSR1;;chr3:141150883..141150961,+!p6@ZBTB38!1.67!45.61!ZBTB38;;chr7:27224842..27224872,-!p1@HOXA11!1.58!36.92!HOXA11;;chr11:65686802..65686818,+!p6@DRAP1!1.56!60.82!DRAP1;;chr7:27224795..27224840,-!p2@HOXA11!1.55!34.21!HOXA11;;chr11:46299539..46299620,+!p2@CREB3L1!1.54!55.39!CREB3L1;;chr19:13134772..13134822,+!p2@NFIX!1.54!49.41!NFIX;;chr11:46299199..46299233,+!p1@CREB3L1!1.48!144.98!CREB3L1;;chr4:174450089..174450153,-!p2@HAND2!1.38!22.81!HAND2;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.38!22.81!ZBED1;;chr2:176969228..176969260,+!p1@HOXD11!1.37!22.26!HOXD11;;chr3:25470156..25470227,+!p2@RARB!1.34!20.63!RARB;;chr11:65687362..65687436,+!p3@DRAP1!1.30!84.16!DRAP1;;chr3:141151009..141151033,+!p10@ZBTB38!1.29!18.46!ZBTB38;;chr15:96876966..96877017,+!p12@NR2F2!1.25!23.89!NR2F2;;chr19:13135582..13135600,+!p3@NFIX!1.22!15.75!NFIX;;chr6:34204921..34204939,+!p3@HMGA1!1.16!402.36!HMGA1;;chr4:174451350..174451363,-!p3@HAND2!1.16!13.57!HAND2;;chr10:119303078..119303169,+!p2@EMX2!1.07!10.86!EMX2;;chr6:19837592..19837621,+!p1@ID4!1.04!61.90!ID4;;chr15:42749722..42749739,-!p2@ZFP106!1.04!17.92!ZFP106;;chr11:65686732..65686756,+!p2@DRAP1!1.03!41.81!DRAP1;;chr11:46299443..46299459,+!p4@CREB3L1!1.03!9.77!CREB3L1;;chr11:46333934..46333963,+!p5@CREB3L1!1.03!9.77!CREB3L1;;chr7:27239703..27239715,-!p1@HOXA13!1.03!9.77!HOXA13;;chr2:239756671..239756732,+!p1@TWIST2!1.01!29.86!TWIST2;;chr2:176973498..176973524,+!p1@HOXD10!1.01!9.23!HOXD10;;chr15:96869114..96869160,+!p11@NR2F2!1.00!12.49!NR2F2;;chr17:59477233..59477263,+!p1@TBX2!0.99!27.69!TBX2;;chr2:239756739..239756755,+!p2@TWIST2!0.99!15.20!TWIST2;;chr19:13135386..13135435,+!p4@NFIX!0.99!8.69!NFIX;;chr8:11561684..11561751,+!p1@GATA4!0.99!8.69!GATA4;;chr19:13136130..13136165,+!p6@NFIX!0.96!10.86!NFIX;;chr9:77112244..77112262,+!p1@RORB!0.96!9.23!RORB;;chr6:34205372..34205412,+!p5@HMGA1!0.95!41.27!HMGA1;;chr11:65687243..65687276,+!p8@DRAP1!0.95!10.86!DRAP1;;chr4:81118647..81118666,+!p1@PRDM8!0.94!10.32!PRDM8;;chr15:37390850..37390909,-!p3@MEIS2!0.93!15.20!MEIS2;;chr10:119302232..119302265,+!p1@EMX2!0.93!7.60!EMX2;;chr2:176969179..176969226,+!p2@HOXD11!0.93!7.60!HOXD11;;chr3:138665937..138665968,-!p1@FOXL2!0.93!7.60!FOXL2;;chr18:19749541..19749557,+!p1@GATA6!0.91!23.35!GATA6;;chr3:138665969..138665993,-!p2@FOXL2!0.91!7.06!FOXL2;;chr6:28321971..28321995,-!p1@ZNF323!0.91!7.06!ZNF323;;chr7:27213893..27213954,-!p1@HOXA10!0.91!7.06!HOXA10;;chr9:35732647..35732678,+!p2@CREB3!0.90!40.18!CREB3;;chr11:65667884..65667895,-!p2@FOSL1!0.90!28.24!FOSL1;;chr19:13136241..13136258,+!p7@NFIX!0.89!9.23!NFIX;;chr15:37391588..37391604,-!p11@MEIS2!0.88!8.69!MEIS2;;chr11:65687158..65687216,+!p4@DRAP1!0.87!38.55!DRAP1;;chr5:92918919..92918942,+!p1@NR2F1!0.87!29.86!NR2F1;;chr15:96874145..96874166,+!p7@NR2F2!0.86!12.49!NR2F2;;chr16:51185172..51185197,-!p1@SALL1!0.84!5.97!SALL1;;chr10:119302645..119302712,+!p3@EMX2!0.84!5.97!EMX2;;chr2:176981499..176981522,+!p2@HOXD10!0.84!5.97!HOXD10;;chr3:25469815..25469866,+!p3@RARB!0.84!5.97!RARB;;chr17:3571863..3571881,-!p1@TAX1BP3!0.83!437.11!TAX1BP3;;chr11:65687222..65687240,+!p7@DRAP1!0.83!7.60!DRAP1;;chr3:12330560..12330579,+!p1@PPARG!0.82!6.52!PPARG;;chr7:19157043..19157088,-!p2@TWIST1!0.81!14.66!TWIST1;;chr15:96869255..96869291,+!p6@NR2F2!0.81!10.32!NR2F2;;chr3:69811858..69811881,+!p5@MITF!0.81!5.43!MITF;;chr9:128510454..128510469,+!p3@PBX3!0.80!7.06!PBX3;;chr11:65667846..65667868,-!p1@FOSL1!0.79!149.87!FOSL1;;chr17:59477275..59477286,+!p3@TBX2!0.79!7.06!TBX2;;chr6:152128810..152128827,+!p2@ESR1!0.77!4.89!ESR1;;chr2:176972000..176972025,+!p4@HOXD11!0.77!4.89!HOXD11;;chr3:141151044..141151053,+!p51@ZBTB38!0.77!4.89!ZBTB38;;chr1:170632285..170632309,+!p1@PRRX1!0.76!5.43!PRRX1;;chr7:19157248..19157268,-!p1@TWIST1!0.74!13.57!TWIST1;;chr15:96869222..96869251,+!p18@NR2F2!0.74!5.43!NR2F2;;chr17:46126136..46126152,+!p1@NFE2L1!0.73!254.67!NFE2L1;;chr15:37392724..37392757,-!p1@MEIS2!0.73!22.26!MEIS2;;chr15:96874244..96874259,+!p5@NR2F2!0.73!11.40!NR2F2;;chrX:48900782..48900793,-!p3@TFE3!0.73!8.69!TFE3;;chr3:141121847..141121868,+!p5@ZBTB38!0.73!7.06!ZBTB38;;chr18:19749386..19749404,+!p2@GATA6!0.73!6.52!GATA6;;chr2:177001290..177001315,+!p1@HOXD3!0.73!4.34!HOXD3;;chr3:69811882..69811898,+!p6@MITF!0.73!4.34!MITF;;chr3:69811899..69811913,+!p11@MITF!0.73!4.34!MITF;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.73!4.34!HOXC5;;chr12:66218904..66218913,+!p11@HMGA2!0.73!4.34!HMGA2;;chr9:35732592..35732640,+!p1@CREB3!0.72!62.44!CREB3;;chr12:53614115..53614154,-!p1@RARG!0.72!25.52!RARG;;chr15:96874927..96874938,+!p8@NR2F2!0.72!9.77!NR2F2;;chr19:13134457..13134462,+!p5@NFIX!0.72!8.14!NFIX;;chr17:7492684..7492778,-!p2@SOX15!0.70!9.23!SOX15;;chr17:46127997..46128015,+!p5@NFE2L1!0.68!5.43!NFE2L1;;chr19:50431999..50432026,+!p4@ATF5!0.68!5.43!ATF5;;chr6:28321909..28321965,-!p3@ZNF323!0.68!3.80!ZNF323;;chr2:19553530..19553547,-!p3@OSR1!0.68!3.80!OSR1;;c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| |expression_enrichment_score=chr4:174451370..174451387,-!p1@HAND2!1.91!80.36!HAND2;;chr2:19558373..19558392,-!p1@OSR1!1.69!126.52!OSR1;;chr3:141150883..141150961,+!p6@ZBTB38!1.67!45.61!ZBTB38;;chr7:27224842..27224872,-!p1@HOXA11!1.58!36.92!HOXA11;;chr11:65686802..65686818,+!p6@DRAP1!1.56!60.82!DRAP1;;chr7:27224795..27224840,-!p2@HOXA11!1.55!34.21!HOXA11;;chr11:46299539..46299620,+!p2@CREB3L1!1.54!55.39!CREB3L1;;chr19:13134772..13134822,+!p2@NFIX!1.54!49.41!NFIX;;chr11:46299199..46299233,+!p1@CREB3L1!1.48!144.98!CREB3L1;;chr4:174450089..174450153,-!p2@HAND2!1.38!22.81!HAND2;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.38!22.81!ZBED1;;chr2:176969228..176969260,+!p1@HOXD11!1.37!22.26!HOXD11;;chr3:25470156..25470227,+!p2@RARB!1.34!20.63!RARB;;chr11:65687362..65687436,+!p3@DRAP1!1.30!84.16!DRAP1;;chr3:141151009..141151033,+!p10@ZBTB38!1.29!18.46!ZBTB38;;chr15:96876966..96877017,+!p12@NR2F2!1.25!23.89!NR2F2;;chr19:13135582..13135600,+!p3@NFIX!1.22!15.75!NFIX;;chr6:34204921..34204939,+!p3@HMGA1!1.16!402.36!HMGA1;;chr4:174451350..174451363,-!p3@HAND2!1.16!13.57!HAND2;;chr10:119303078..119303169,+!p2@EMX2!1.07!10.86!EMX2;;chr6:19837592..19837621,+!p1@ID4!1.04!61.90!ID4;;chr15:42749722..42749739,-!p2@ZFP106!1.04!17.92!ZFP106;;chr11:65686732..65686756,+!p2@DRAP1!1.03!41.81!DRAP1;;chr11:46299443..46299459,+!p4@CREB3L1!1.03!9.77!CREB3L1;;chr11:46333934..46333963,+!p5@CREB3L1!1.03!9.77!CREB3L1;;chr7:27239703..27239715,-!p1@HOXA13!1.03!9.77!HOXA13;;chr2:239756671..239756732,+!p1@TWIST2!1.01!29.86!TWIST2;;chr2:176973498..176973524,+!p1@HOXD10!1.01!9.23!HOXD10;;chr15:96869114..96869160,+!p11@NR2F2!1.00!12.49!NR2F2;;chr17:59477233..59477263,+!p1@TBX2!0.99!27.69!TBX2;;chr2:239756739..239756755,+!p2@TWIST2!0.99!15.20!TWIST2;;chr19:13135386..13135435,+!p4@NFIX!0.99!8.69!NFIX;;chr8:11561684..11561751,+!p1@GATA4!0.99!8.69!GATA4;;chr19:13136130..13136165,+!p6@NFIX!0.96!10.86!NFIX;;chr9:77112244..77112262,+!p1@RORB!0.96!9.23!RORB;;chr6:34205372..34205412,+!p5@HMGA1!0.95!41.27!HMGA1;;chr11:65687243..65687276,+!p8@DRAP1!0.95!10.86!DRAP1;;chr4:81118647..81118666,+!p1@PRDM8!0.94!10.32!PRDM8;;chr15:37390850..37390909,-!p3@MEIS2!0.93!15.20!MEIS2;;chr10:119302232..119302265,+!p1@EMX2!0.93!7.60!EMX2;;chr2:176969179..176969226,+!p2@HOXD11!0.93!7.60!HOXD11;;chr3:138665937..138665968,-!p1@FOXL2!0.93!7.60!FOXL2;;chr18:19749541..19749557,+!p1@GATA6!0.91!23.35!GATA6;;chr3:138665969..138665993,-!p2@FOXL2!0.91!7.06!FOXL2;;chr6:28321971..28321995,-!p1@ZNF323!0.91!7.06!ZNF323;;chr7:27213893..27213954,-!p1@HOXA10!0.91!7.06!HOXA10;;chr9:35732647..35732678,+!p2@CREB3!0.90!40.18!CREB3;;chr11:65667884..65667895,-!p2@FOSL1!0.90!28.24!FOSL1;;chr19:13136241..13136258,+!p7@NFIX!0.89!9.23!NFIX;;chr15:37391588..37391604,-!p11@MEIS2!0.88!8.69!MEIS2;;chr11:65687158..65687216,+!p4@DRAP1!0.87!38.55!DRAP1;;chr5:92918919..92918942,+!p1@NR2F1!0.87!29.86!NR2F1;;chr15:96874145..96874166,+!p7@NR2F2!0.86!12.49!NR2F2;;chr16:51185172..51185197,-!p1@SALL1!0.84!5.97!SALL1;;chr10:119302645..119302712,+!p3@EMX2!0.84!5.97!EMX2;;chr2:176981499..176981522,+!p2@HOXD10!0.84!5.97!HOXD10;;chr3:25469815..25469866,+!p3@RARB!0.84!5.97!RARB;;chr17:3571863..3571881,-!p1@TAX1BP3!0.83!437.11!TAX1BP3;;chr11:65687222..65687240,+!p7@DRAP1!0.83!7.60!DRAP1;;chr3:12330560..12330579,+!p1@PPARG!0.82!6.52!PPARG;;chr7:19157043..19157088,-!p2@TWIST1!0.81!14.66!TWIST1;;chr15:96869255..96869291,+!p6@NR2F2!0.81!10.32!NR2F2;;chr3:69811858..69811881,+!p5@MITF!0.81!5.43!MITF;;chr9:128510454..128510469,+!p3@PBX3!0.80!7.06!PBX3;;chr11:65667846..65667868,-!p1@FOSL1!0.79!149.87!FOSL1;;chr17:59477275..59477286,+!p3@TBX2!0.79!7.06!TBX2;;chr6:152128810..152128827,+!p2@ESR1!0.77!4.89!ESR1;;chr2:176972000..176972025,+!p4@HOXD11!0.77!4.89!HOXD11;;chr3:141151044..141151053,+!p51@ZBTB38!0.77!4.89!ZBTB38;;chr1:170632285..170632309,+!p1@PRRX1!0.76!5.43!PRRX1;;chr7:19157248..19157268,-!p1@TWIST1!0.74!13.57!TWIST1;;chr15:96869222..96869251,+!p18@NR2F2!0.74!5.43!NR2F2;;chr17:46126136..46126152,+!p1@NFE2L1!0.73!254.67!NFE2L1;;chr15:37392724..37392757,-!p1@MEIS2!0.73!22.26!MEIS2;;chr15:96874244..96874259,+!p5@NR2F2!0.73!11.40!NR2F2;;chrX:48900782..48900793,-!p3@TFE3!0.73!8.69!TFE3;;chr3:141121847..141121868,+!p5@ZBTB38!0.73!7.06!ZBTB38;;chr18:19749386..19749404,+!p2@GATA6!0.73!6.52!GATA6;;chr2:177001290..177001315,+!p1@HOXD3!0.73!4.34!HOXD3;;chr3:69811882..69811898,+!p6@MITF!0.73!4.34!MITF;;chr3:69811899..69811913,+!p11@MITF!0.73!4.34!MITF;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.73!4.34!HOXC5;;chr12:66218904..66218913,+!p11@HMGA2!0.73!4.34!HMGA2;;chr9:35732592..35732640,+!p1@CREB3!0.72!62.44!CREB3;;chr12:53614115..53614154,-!p1@RARG!0.72!25.52!RARG;;chr15:96874927..96874938,+!p8@NR2F2!0.72!9.77!NR2F2;;chr19:13134457..13134462,+!p5@NFIX!0.72!8.14!NFIX;;chr17:7492684..7492778,-!p2@SOX15!0.70!9.23!SOX15;;chr17:46127997..46128015,+!p5@NFE2L1!0.68!5.43!NFE2L1;;chr19:50431999..50432026,+!p4@ATF5!0.68!5.43!ATF5;;chr6:28321909..28321965,-!p3@ZNF323!0.68!3.80!ZNF323;;chr2:19553530..19553547,-!p3@OSR1!0.68!3.80!OSR1;;chr4:111558135..111558198,-!p2@PITX2!0.68!3.80!PITX2;;chr4:26323764..26323821,+!p15@RBPJ!0.68!3.80!RBPJ;;chr15:96877047..96877056,+!p39@NR2F2!0.68!3.80!NR2F2;;chr16:31076332..31076388,-!p3@ZNF668!0.68!3.80!ZNF668;;chr17:46128217..46128243,+!p11@NFE2L1!0.68!3.80!NFE2L1;;chr5:72744445..72744466,-!p2@FOXD1!0.67!6.52!FOXD1;;chr11:8102846..8102892,+!p1@TUB!0.67!5.43!TUB;;chr17:38256799..38256815,-!p3@NR1D1!0.66!7.06!NR1D1;;chr11:65686952..65686975,+!p5@DRAP1!0.65!22.26!DRAP1;;chr5:72744594..72744609,-!p1@FOXD1!0.64!17.92!FOXD1;;chr3:114343768..114343822,-!p1@ZBTB20!0.64!16.83!ZBTB20;;chr16:86600426..86600441,+!p1@FOXC2!0.64!9.23!FOXC2;;chr19:47922750..47922795,-!p1@MEIS3!0.64!5.97!MEIS3;;chr15:37390374..37390422,-!p9@MEIS2!0.64!4.34!MEIS2;;chr15:37392094..37392116,-!p6@MEIS2!0.64!4.34!MEIS2;;chr1:170632959..170632987,+!p4@PRRX1!0.64!3.80!PRRX1;;chr15:96874216..96874236,+!p13@NR2F2!0.63!5.43!NR2F2;;chr15:37392703..37392717,-!p8@MEIS2!0.63!4.89!MEIS2;;chr11:707063..707088,-!p4@DEAF1!0.63!4.34!DEAF1;;chr11:46332679..46332695,+!p12@CREB3L1!0.63!3.26!CREB3L1;;chr12:66218923..66218934,+!p14@HMGA2!0.63!3.26!HMGA2;;chr16:51185318..51185348,-!p2@SALL1!0.63!3.26!SALL1;;chr17:59477403..59477414,+!p4@TBX2!0.63!3.26!TBX2;;chr2:176994408..176994492,+!p1@HOXD8!0.63!3.26!HOXD8;;chr5:139492456..139492489,+!p7@PURA!0.63!3.26!PURA;;chr7:27239740..27239759,-!p2@HOXA13!0.63!3.26!HOXA13;;chr17:38256822..38256851,-!p1@NR1D1!0.62!29.86!NR1D1;;chr3:12329397..12329433,+!p2@PPARG!0.62!8.14!PPARG;;chr2:200322654..200322707,-!p2@SATB2!0.62!4.89!SATB2;;chr3:25469724..25469773,+!p1@RARB!0.62!4.89!RARB;;chr5:72743793..72743855,-!p4@FOXD1!0.62!3.80!FOXD1;;chr9:35732561..35732587,+!p3@CREB3!0.61!15.20!CREB3;;chr14:24837368..24837401,+!p1@NFATC4!0.61!8.14!NFATC4;;chr9:128509663..128509715,+!p1@PBX3!0.60!11.95!PBX3;;chr15:37390482..37390572,-!p7@MEIS2!0.60!4.34!MEIS2;;chr15:37392576..37392589,-!p12@MEIS2!0.60!3.80!MEIS2;;chr5:92919100..92919135,+!p3@NR2F1!0.60!3.80!NR2F1;;chr15:96874012..96874042,+!p2@NR2F2!0.59!31.49!NR2F2;;chr15:96874063..96874074,+!p10@NR2F2!0.59!5.97!NR2F2;;chr20:39946400..39946423,-!p3@ZHX3!0.59!5.97!ZHX3;;chr11:706938..707008,-!p3@DEAF1!0.59!3.80!DEAF1;;chr15:37392534..37392562,-!p10@MEIS2!0.59!3.26!MEIS2;;chr5:92918956..92918969,+!p4@NR2F1!0.59!3.26!NR2F1;;chr1:164528410..164528428,+!p1@PBX1!0.58!25.52!PBX1;;chr12:26277956..26277980,-!p1@BHLHE41!0.58!11.95!BHLHE41;;chr10:35484053..35484076,+!p1@CREM!0.58!8.14!CREM;;chr17:59477197..59477212,+!p2@TBX2!0.58!5.43!TBX2;;chr11:46299186..46299195,+!p3@CREB3L1!0.58!3.26!CREB3L1;;chr1:151032860..151032918,+!p1@MLLT11!0.57!39.64!MLLT11;;chr15:96873984..96873999,+!p3@NR2F2!0.57!24.43!NR2F2;;chr22:41735880..41735903,+!p5@ZC3H7B!0.57!3.26!ZC3H7B;;chr1:164528687..164528711,+!p6@PBX1!0.57!3.26!PBX1;;chr1:170633262..170633285,+!p3@PRRX1!0.57!3.26!PRRX1;;chr1:170633058..170633084,+!p5@PRRX1!0.57!2.71!PRRX1;;chr15:96869165..96869183,+!p20@NR2F2!0.57!2.71!NR2F2;;chr16:67198633..67198671,+!p1@HSF4!0.57!2.71!HSF4;;chr19:13135566..13135577,+!p9@NFIX!0.57!2.71!NFIX;;chr19:13135731..13135787,+!p10@NFIX!0.57!2.71!NFIX;;chr19:13136057..13136085,+!p11@NFIX!0.57!2.71!NFIX;;chr6:152126830..152126847,+!p4@ESR1!0.57!2.71!ESR1;;chr7:100076673..100076682,-!p7@TSC22D4!0.57!2.71!TSC22D4;;chr7:27196267..27196311,-!p1@HOXA7!0.57!2.71!HOXA7;;chr10:119307702..119307723,+!p10@EMX2!0.57!2.71!EMX2;;chr11:46333883..46333900,+!p8@CREB3L1!0.57!2.71!CREB3L1;;chr12:54393880..54393962,+!p1@HOXC9!0.57!2.71!HOXC9;;chr12:54394309..54394336,+!p2@HOXC9!0.57!2.71!HOXC9;;chr12:8186270..8186292,+!p3@FOXJ2!0.57!2.71!FOXJ2;;chr22:41763452..41763466,+!p2@TEF!0.57!2.71!TEF;;chr2:85981073..85981091,+!p5@ATOH8!0.57!2.71!ATOH8;;chr3:141150971..141150978,+!p60@ZBTB38!0.57!2.71!ZBTB38;;chr4:26324474..26324501,+!p16@RBPJ!0.57!2.71!RBPJ;;chr12:124873357..124873401,-!p1@NCOR2!0.56!38.01!NCOR2;;chr14:21566731..21566836,-!p1@ZNF219!0.56!34.75!ZNF219;;chr10:77161133..77161176,-!p3@ZNF503!0.56!6.52!ZNF503;;chr5:92919068..92919082,+!p5@NR2F1!0.56!3.26!NR2F1;;chr15:37392593..37392607,-!p13@MEIS2!0.56!3.26!MEIS2;;chr9:2158443..2158481,+!p2@SMARCA2!0.55!8.69!SMARCA2;;chr12:66218255..66218304,+!p3@HMGA2!0.55!8.14!HMGA2;;chr13:45151403..45151433,-!p5@TSC22D1!0.55!6.52!TSC22D1;;chr13:45151259..45151326,-!p2@TSC22D1!0.54!18.46!TSC22D1;;chr12:57504975..57505019,-!p2@STAT6!0.54!12.49!STAT6;;chr1:164528384..164528409,+!p3@PBX1!0.54!9.23!PBX1;;chr12:26277929..26277955,-!p3@BHLHE41!0.54!3.80!BHLHE41;;chr9:35732514..35732530,+!p5@CREB3!0.54!3.80!CREB3;;chr7:106809470..106809481,+!p2@HBP1!0.54!3.80!HBP1;;chr3:157823517..157823562,-!p1@SHOX2!0.54!2.71!SHOX2;;chr19:13106214..13106382,+!p1@NFIX!0.53!71.13!NFIX;;chr17:3571887..3571918,-!p2@TAX1BP3!0.53!34.21!TAX1BP3;;chr3:178789522..178789564,-!p2@ZMAT3!0.53!22.26!ZMAT3;;chrX:66763856..66763896,+!p1@AR!0.53!3.80!AR;;chr12:66218836..66218888,+!p1@HMGA2!0.52!27.69!HMGA2;;chr2:66662281..66662308,+!p1@MEIS1!0.52!9.77!MEIS1;;chr2:85981222..85981259,+!p2@ATOH8!0.52!4.34!ATOH8;;chr3:128206762..128206781,-!p2@GATA2!0.51!1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| ||
Line 38: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/leiomyoma%2520cell%2520line%253a10964C.CNhs11722.10569-108B2.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/leiomyoma%2520cell%2520line%253a10964C.CNhs11722.10569-108B2.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/leiomyoma%2520cell%2520line%253a10964C.CNhs11722.10569-108B2.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/leiomyoma%2520cell%2520line%253a10964C.CNhs11722.10569-108B2.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/leiomyoma%2520cell%2520line%253a10964C.CNhs11722.10569-108B2.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10569-108B2 | |id=FF:10569-108B2 | ||
|is_a=EFO:0002091;;FF:0000210;;FF:0102694 | |is_a=EFO:0002091;;FF:0000210;;FF:0102694 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs11722 | |||
|library_id_phase_based=2:CNhs11722 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10569 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10569 | |||
|name=leiomyoma cell line:10964C | |name=leiomyoma cell line:10964C | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 46: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11722,LSID819,release009,COMPLETED | |profile_hcage=CNhs11722,LSID819,release009,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=108 | |rna_box=108 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
Line 61: | Line 78: | ||
|rna_weight_ug=37.0624 | |rna_weight_ug=37.0624 | ||
|sample_age= | |sample_age= | ||
|sample_category=cell lines | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 82: | Line 100: | ||
|top_motifs=HMX1:2.15924329445;NKX2-2,8:1.96522376595;ALX4:1.83318022295;UFEwm:1.82302343689;RXR{A,B,G}:1.69772687808;PPARG:1.68427574988;GCM1,2:1.65625400522;GZF1:1.65324333567;ESR1:1.51180856522;KLF4:1.45239335096;EN1,2:1.4234598563;HSF1,2:1.36943400697;ZBTB6:1.30866225352;NFE2L1:1.28319173101;ATF6:1.27996372624;HES1:1.24871225791;HOX{A4,D4}:1.24558743159;NR1H4:1.22768306743;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.15581549661;ZIC1..3:1.04809233286;TFAP4:0.991231223726;TFCP2:0.986310236948;XBP1:0.960556565772;ARID5B:0.95895512141;NKX3-1:0.953664435525;TAL1_TCF{3,4,12}:0.946244200888;SPZ1:0.930349349906;ESRRA:0.926513367197;RXRA_VDR{dimer}:0.919364562819;LHX3,4:0.832179296718;ZNF238:0.830002914714;IKZF1:0.828597168344;EBF1:0.825390244863;MAFB:0.824376401056;CRX:0.795963762297;TBX4,5:0.788885824044;bHLH_family:0.741458937205;TLX1..3_NFIC{dimer}:0.740871770183;POU6F1:0.723090967051;SRF:0.707761540509;NR6A1:0.706209328483;AIRE:0.658726256299;CDC5L:0.631429773471;MYFfamily:0.608382767862;HIC1:0.585901366377;TEAD1:0.548912200904;TP53:0.537365567032;HOXA9_MEIS1:0.535386257789;HAND1,2:0.530550675518;NKX3-2:0.470703306368;GFI1B:0.46548214475;RFX2..5_RFXANK_RFXAP:0.448122685018;TFAP2{A,C}:0.422594884205;SREBF1,2:0.392305125907;MYBL2:0.375173716169;NFE2L2:0.357824734727;GTF2A1,2:0.336572704176;SMAD1..7,9:0.330927318872;HOX{A5,B5}:0.330418038638;ZNF148:0.328536163208;PRDM1:0.315219300961;LMO2:0.306838296188;NR3C1:0.274623736912;YY1:0.241104237522;GLI1..3:0.220397540519;TBP:0.216218099348;FOSL2:0.211003618316;REST:0.186885298255;ALX1:0.185071581669;GATA4:0.172246274229;PAX5:0.144010479217;POU3F1..4:0.136904729477;GTF2I:0.129308166597;BACH2:0.125839536675;TOPORS:0.107702436441;RREB1:0.104822151234;EVI1:0.102587890181;MTE{core}:0.0871981259178;PAX1,9:0.0705691915495;HNF1A:0.068592962659;HLF:0.060225087848;T:0.0483768882383;FOS_FOS{B,L1}_JUN{B,D}:0.0474170390614;VSX1,2:0.0471081355985;AR:0.0436450327818;FOXD3:0.0415938974214;RFX1:0.03626246113;NANOG{mouse}:0.0337102021283;HNF4A_NR2F1,2:0.0165053132091;ONECUT1,2:-0.0124172294449;NFATC1..3:-0.014176265986;JUN:-0.0202534470639;TFAP2B:-0.0334965304271;NHLH1,2:-0.0403210406622;NR5A1,2:-0.0439315495735;ZNF423:-0.0443432351291;DMAP1_NCOR{1,2}_SMARC:-0.085522537954;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.11474302204;PAX4:-0.120283883011;ELK1,4_GABP{A,B1}:-0.122323985598;PAX6:-0.138785298702;NFIX:-0.170119832279;NFE2:-0.171125071134;MZF1:-0.177528165406;MAZ:-0.184084999317;NKX6-1,2:-0.198204101886;CEBPA,B_DDIT3:-0.202364309846;GFI1:-0.229814385747;NRF1:-0.235549048133;STAT2,4,6:-0.246742153549;PAX3,7:-0.274092505058;PATZ1:-0.294665445771;EGR1..3:-0.33382454077;HMGA1,2:-0.342525785329;IRF1,2:-0.413666439529;PAX2:-0.418936476745;MTF1:-0.425570838344;XCPE1{core}:-0.425578188952;SP1:-0.429185170498;FOXM1:-0.447348801038;MEF2{A,B,C,D}:-0.459076449524;RUNX1..3:-0.460337257772;ZNF384:-0.461087275866;AHR_ARNT_ARNT2:-0.462714544354;HIF1A:-0.462969209042;FOXL1:-0.473405124494;NFKB1_REL_RELA:-0.478031189963;FOXQ1:-0.48913063685;DBP:-0.492799168924;SNAI1..3:-0.494604783965;TGIF1:-0.505392778185;CDX1,2,4:-0.529462114048;HOX{A6,A7,B6,B7}:-0.546141893285;SPI1:-0.548893504007;MED-1{core}:-0.549773495198;FOX{D1,D2}:-0.553396821377;PRRX1,2:-0.558791181791;ZNF143:-0.565349794008;TEF:-0.570165630961;SOX17:-0.57034327447;MYOD1:-0.581427913367;NANOG:-0.588045427438;ATF5_CREB3:-0.604718285939;IRF7:-0.608189712134;ZFP161:-0.612179241541;FOXO1,3,4:-0.631691025224;FOXP3:-0.638121570381;ETS1,2:-0.638262922416;SOX5:-0.69199662249;SPIB:-0.714708116593;STAT5{A,B}:-0.721217101598;LEF1_TCF7_TCF7L1,2:-0.727170467448;ZBTB16:-0.728052962905;NFIL3:-0.739304957262;NKX2-3_NKX2-5:-0.750482595785;PDX1:-0.759944068595;FOXN1:-0.77785488538;POU1F1:-0.790361295857;HBP1_HMGB_SSRP1_UBTF:-0.803151600254;SOX2:-0.809906932148;EP300:-0.81238622687;ELF1,2,4:-0.82055256646;GATA6:-0.855183751137;ZEB1:-0.943183824311;PAX8:-0.962222614498;MYB:-0.981766003786;ATF2:-1.00713043779;PBX1:-1.0949341806;CREB1:-1.12072514418;OCT4_SOX2{dimer}:-1.12328262806;E2F1..5:-1.13278134056;ADNP_IRX_SIX_ZHX:-1.15501223052;ATF4:-1.18517978111;NFY{A,B,C}:-1.19285818651;TLX2:-1.20475657945;RORA:-1.2132544268;STAT1,3:-1.24175498276;BREu{core}:-1.36637790204;FOX{I1,J2}:-1.39134943554;CUX2:-1.39623181356;POU5F1:-1.43403673787;NKX2-1,4:-1.49046337062;FOXP1:-1.49231879284;TFDP1:-1.63292247114;FOX{F1,F2,J1}:-1.65187909736;PITX1..3:-1.65379446322;IKZF2:-1.70187530902;BPTF:-1.73437021752;SOX{8,9,10}:-1.76832984871;POU2F1..3:-1.86836493977;RBPJ:-2.02450490048;FOXA2:-2.38599645856 | |top_motifs=HMX1:2.15924329445;NKX2-2,8:1.96522376595;ALX4:1.83318022295;UFEwm:1.82302343689;RXR{A,B,G}:1.69772687808;PPARG:1.68427574988;GCM1,2:1.65625400522;GZF1:1.65324333567;ESR1:1.51180856522;KLF4:1.45239335096;EN1,2:1.4234598563;HSF1,2:1.36943400697;ZBTB6:1.30866225352;NFE2L1:1.28319173101;ATF6:1.27996372624;HES1:1.24871225791;HOX{A4,D4}:1.24558743159;NR1H4:1.22768306743;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.15581549661;ZIC1..3:1.04809233286;TFAP4:0.991231223726;TFCP2:0.986310236948;XBP1:0.960556565772;ARID5B:0.95895512141;NKX3-1:0.953664435525;TAL1_TCF{3,4,12}:0.946244200888;SPZ1:0.930349349906;ESRRA:0.926513367197;RXRA_VDR{dimer}:0.919364562819;LHX3,4:0.832179296718;ZNF238:0.830002914714;IKZF1:0.828597168344;EBF1:0.825390244863;MAFB:0.824376401056;CRX:0.795963762297;TBX4,5:0.788885824044;bHLH_family:0.741458937205;TLX1..3_NFIC{dimer}:0.740871770183;POU6F1:0.723090967051;SRF:0.707761540509;NR6A1:0.706209328483;AIRE:0.658726256299;CDC5L:0.631429773471;MYFfamily:0.608382767862;HIC1:0.585901366377;TEAD1:0.548912200904;TP53:0.537365567032;HOXA9_MEIS1:0.535386257789;HAND1,2:0.530550675518;NKX3-2:0.470703306368;GFI1B:0.46548214475;RFX2..5_RFXANK_RFXAP:0.448122685018;TFAP2{A,C}:0.422594884205;SREBF1,2:0.392305125907;MYBL2:0.375173716169;NFE2L2:0.357824734727;GTF2A1,2:0.336572704176;SMAD1..7,9:0.330927318872;HOX{A5,B5}:0.330418038638;ZNF148:0.328536163208;PRDM1:0.315219300961;LMO2:0.306838296188;NR3C1:0.274623736912;YY1:0.241104237522;GLI1..3:0.220397540519;TBP:0.216218099348;FOSL2:0.211003618316;REST:0.186885298255;ALX1:0.185071581669;GATA4:0.172246274229;PAX5:0.144010479217;POU3F1..4:0.136904729477;GTF2I:0.129308166597;BACH2:0.125839536675;TOPORS:0.107702436441;RREB1:0.104822151234;EVI1:0.102587890181;MTE{core}:0.0871981259178;PAX1,9:0.0705691915495;HNF1A:0.068592962659;HLF:0.060225087848;T:0.0483768882383;FOS_FOS{B,L1}_JUN{B,D}:0.0474170390614;VSX1,2:0.0471081355985;AR:0.0436450327818;FOXD3:0.0415938974214;RFX1:0.03626246113;NANOG{mouse}:0.0337102021283;HNF4A_NR2F1,2:0.0165053132091;ONECUT1,2:-0.0124172294449;NFATC1..3:-0.014176265986;JUN:-0.0202534470639;TFAP2B:-0.0334965304271;NHLH1,2:-0.0403210406622;NR5A1,2:-0.0439315495735;ZNF423:-0.0443432351291;DMAP1_NCOR{1,2}_SMARC:-0.085522537954;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.11474302204;PAX4:-0.120283883011;ELK1,4_GABP{A,B1}:-0.122323985598;PAX6:-0.138785298702;NFIX:-0.170119832279;NFE2:-0.171125071134;MZF1:-0.177528165406;MAZ:-0.184084999317;NKX6-1,2:-0.198204101886;CEBPA,B_DDIT3:-0.202364309846;GFI1:-0.229814385747;NRF1:-0.235549048133;STAT2,4,6:-0.246742153549;PAX3,7:-0.274092505058;PATZ1:-0.294665445771;EGR1..3:-0.33382454077;HMGA1,2:-0.342525785329;IRF1,2:-0.413666439529;PAX2:-0.418936476745;MTF1:-0.425570838344;XCPE1{core}:-0.425578188952;SP1:-0.429185170498;FOXM1:-0.447348801038;MEF2{A,B,C,D}:-0.459076449524;RUNX1..3:-0.460337257772;ZNF384:-0.461087275866;AHR_ARNT_ARNT2:-0.462714544354;HIF1A:-0.462969209042;FOXL1:-0.473405124494;NFKB1_REL_RELA:-0.478031189963;FOXQ1:-0.48913063685;DBP:-0.492799168924;SNAI1..3:-0.494604783965;TGIF1:-0.505392778185;CDX1,2,4:-0.529462114048;HOX{A6,A7,B6,B7}:-0.546141893285;SPI1:-0.548893504007;MED-1{core}:-0.549773495198;FOX{D1,D2}:-0.553396821377;PRRX1,2:-0.558791181791;ZNF143:-0.565349794008;TEF:-0.570165630961;SOX17:-0.57034327447;MYOD1:-0.581427913367;NANOG:-0.588045427438;ATF5_CREB3:-0.604718285939;IRF7:-0.608189712134;ZFP161:-0.612179241541;FOXO1,3,4:-0.631691025224;FOXP3:-0.638121570381;ETS1,2:-0.638262922416;SOX5:-0.69199662249;SPIB:-0.714708116593;STAT5{A,B}:-0.721217101598;LEF1_TCF7_TCF7L1,2:-0.727170467448;ZBTB16:-0.728052962905;NFIL3:-0.739304957262;NKX2-3_NKX2-5:-0.750482595785;PDX1:-0.759944068595;FOXN1:-0.77785488538;POU1F1:-0.790361295857;HBP1_HMGB_SSRP1_UBTF:-0.803151600254;SOX2:-0.809906932148;EP300:-0.81238622687;ELF1,2,4:-0.82055256646;GATA6:-0.855183751137;ZEB1:-0.943183824311;PAX8:-0.962222614498;MYB:-0.981766003786;ATF2:-1.00713043779;PBX1:-1.0949341806;CREB1:-1.12072514418;OCT4_SOX2{dimer}:-1.12328262806;E2F1..5:-1.13278134056;ADNP_IRX_SIX_ZHX:-1.15501223052;ATF4:-1.18517978111;NFY{A,B,C}:-1.19285818651;TLX2:-1.20475657945;RORA:-1.2132544268;STAT1,3:-1.24175498276;BREu{core}:-1.36637790204;FOX{I1,J2}:-1.39134943554;CUX2:-1.39623181356;POU5F1:-1.43403673787;NKX2-1,4:-1.49046337062;FOXP1:-1.49231879284;TFDP1:-1.63292247114;FOX{F1,F2,J1}:-1.65187909736;PITX1..3:-1.65379446322;IKZF2:-1.70187530902;BPTF:-1.73437021752;SOX{8,9,10}:-1.76832984871;POU2F1..3:-1.86836493977;RBPJ:-2.02450490048;FOXA2:-2.38599645856 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10569-108B2;search_select_hide=table117:FF:10569-108B2 | |||
}} | }} |
Latest revision as of 14:29, 3 June 2020
Name: | leiomyoma cell line:10964C |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs11722 |
Sample type: | cell lines |
Genomic View: | UCSC |
RefEX: | Specific genes |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11722
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11722
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.393 |
10 | 10 | 0.542 |
100 | 100 | 0.859 |
101 | 101 | 0.794 |
102 | 102 | 0.53 |
103 | 103 | 0.0713 |
104 | 104 | 0.615 |
105 | 105 | 0.233 |
106 | 106 | 0.114 |
107 | 107 | 0.268 |
108 | 108 | 0.213 |
109 | 109 | 0.14 |
11 | 11 | 0.122 |
110 | 110 | 0.292 |
111 | 111 | 0.796 |
112 | 112 | 0.0721 |
113 | 113 | 0.0294 |
114 | 114 | 0.0326 |
115 | 115 | 0.0115 |
116 | 116 | 0.062 |
117 | 117 | 0.465 |
118 | 118 | 0.506 |
119 | 119 | 0.727 |
12 | 12 | 0.531 |
120 | 120 | 0.107 |
121 | 121 | 0.228 |
122 | 122 | 0.463 |
123 | 123 | 0.0173 |
124 | 124 | 0.902 |
125 | 125 | 0.933 |
126 | 126 | 0.864 |
127 | 127 | 0.744 |
128 | 128 | 0.182 |
129 | 129 | 0.554 |
13 | 13 | 0.95 |
130 | 130 | 0.814 |
131 | 131 | 0.412 |
132 | 132 | 0.567 |
133 | 133 | 0.0564 |
134 | 134 | 0.351 |
135 | 135 | 0.976 |
136 | 136 | 0.29 |
137 | 137 | 0.298 |
138 | 138 | 0.934 |
139 | 139 | 0.104 |
14 | 14 | 0.72 |
140 | 140 | 0.877 |
141 | 141 | 0.436 |
142 | 142 | 0.947 |
143 | 143 | 0.0994 |
144 | 144 | 0.213 |
145 | 145 | 0.546 |
146 | 146 | 0.736 |
147 | 147 | 0.0509 |
148 | 148 | 0.108 |
149 | 149 | 0.00252 |
15 | 15 | 0.759 |
150 | 150 | 0.518 |
151 | 151 | 0.417 |
152 | 152 | 0.0346 |
153 | 153 | 0.873 |
154 | 154 | 0.654 |
155 | 155 | 0.313 |
156 | 156 | 0.887 |
157 | 157 | 0.882 |
158 | 158 | 0.0157 |
159 | 159 | 0.189 |
16 | 16 | 0.0134 |
160 | 160 | 0.208 |
161 | 161 | 0.618 |
162 | 162 | 0.428 |
163 | 163 | 0.752 |
164 | 164 | 0.125 |
165 | 165 | 0.917 |
166 | 166 | 0.108 |
167 | 167 | 0.752 |
168 | 168 | 0.639 |
169 | 169 | 0.0351 |
17 | 17 | 0.264 |
18 | 18 | 0.288 |
19 | 19 | 0.04 |
2 | 2 | 0.31 |
20 | 20 | 0.53 |
21 | 21 | 0.222 |
22 | 22 | 0.0573 |
23 | 23 | 0.349 |
24 | 24 | 0.429 |
25 | 25 | 0.495 |
26 | 26 | 0.356 |
27 | 27 | 0.0888 |
28 | 28 | 0.275 |
29 | 29 | 0.109 |
3 | 3 | 0.272 |
30 | 30 | 0.41 |
31 | 31 | 0.315 |
32 | 32 | 6.09292e-6 |
33 | 33 | 0.832 |
34 | 34 | 0.816 |
35 | 35 | 0.206 |
36 | 36 | 0.0853 |
37 | 37 | 0.0173 |
38 | 38 | 0.928 |
39 | 39 | 0.207 |
4 | 4 | 0.509 |
40 | 40 | 0.93 |
41 | 41 | 0.889 |
42 | 42 | 0.763 |
43 | 43 | 0.325 |
44 | 44 | 0.00459 |
45 | 45 | 0.55 |
46 | 46 | 0.09 |
47 | 47 | 0.534 |
48 | 48 | 0.511 |
49 | 49 | 0.827 |
5 | 5 | 0.815 |
50 | 50 | 0.794 |
51 | 51 | 0.362 |
52 | 52 | 0.455 |
53 | 53 | 0.154 |
54 | 54 | 0.386 |
55 | 55 | 0.318 |
56 | 56 | 0.523 |
57 | 57 | 0.876 |
58 | 58 | 0.813 |
59 | 59 | 0.0301 |
6 | 6 | 0.951 |
60 | 60 | 0.419 |
61 | 61 | 0.913 |
62 | 62 | 0.736 |
63 | 63 | 0.318 |
64 | 64 | 0.686 |
65 | 65 | 0.211 |
66 | 66 | 0.601 |
67 | 67 | 0.567 |
68 | 68 | 0.381 |
69 | 69 | 0.192 |
7 | 7 | 0.285 |
70 | 70 | 0.00759 |
71 | 71 | 0.173 |
72 | 72 | 0.872 |
73 | 73 | 0.0211 |
74 | 74 | 0.627 |
75 | 75 | 0.345 |
76 | 76 | 0.854 |
77 | 77 | 0.00662 |
78 | 78 | 0.591 |
79 | 79 | 0.00727 |
8 | 8 | 0.03 |
80 | 80 | 0.214 |
81 | 81 | 0.236 |
82 | 82 | 0.0404 |
83 | 83 | 0.353 |
84 | 84 | 0.449 |
85 | 85 | 0.101 |
86 | 86 | 0.461 |
87 | 87 | 0.0456 |
88 | 88 | 0.491 |
89 | 89 | 0.0154 |
9 | 9 | 0.435 |
90 | 90 | 0.991 |
91 | 91 | 0.93 |
92 | 92 | 0.0536 |
93 | 93 | 0.404 |
94 | 94 | 0.805 |
95 | 95 | 0.257 |
96 | 96 | 0.934 |
97 | 97 | 0.947 |
98 | 98 | 0.616 |
99 | 99 | 0.0329 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11722
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0102694 leiomyoma cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
DOID: Disease
4 (disease)
14566 (disease of cellular proliferation)
0060072 (benign neoplasm)
0060084 (cell type benign neoplasm)
127 (leiomyoma)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000995 (uterus)
0003134 (female reproductive organ)
0005156 (reproductive structure)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0003975 (internal female genitalia)
0004175 (internal genitalia)
0010317 (germ layer / neural crest derived structure)
0003100 (female organism)
0000474 (female reproductive system)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0102694 (leiomyoma cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0005795 (embryonic uterus)
UBERON:0010316 (germ layer / neural crest)