FF:10727-110A7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000055,UBERON:0000061,UBERON:0000465,UBERON:0000477 | |DRA_sample_Accession=CAGE@SAMD00005770 | ||
|accession_numbers=CAGE;DRX007924;DRR008796;DRZ000221;DRZ001606;DRZ011571;DRZ012956 | |||
|ancestors_in_anatomy_facet=UBERON:0000055,UBERON:0004111,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0001062,UBERON:0000480 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet=DOID:4 | |ancestors_in_disease_facet=DOID:4 | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
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| 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| ||
Line 35: | Line 40: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/lymphangiectasia%2520cell%2520line%253aDS-1.CNhs11852.10727-110A7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/lymphangiectasia%2520cell%2520line%253aDS-1.CNhs11852.10727-110A7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/lymphangiectasia%2520cell%2520line%253aDS-1.CNhs11852.10727-110A7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/lymphangiectasia%2520cell%2520line%253aDS-1.CNhs11852.10727-110A7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/lymphangiectasia%2520cell%2520line%253aDS-1.CNhs11852.10727-110A7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10727-110A7 | |id=FF:10727-110A7 | ||
|is_a=DOID:4;;EFO:0002091;;FF:0000003;;FF:0000210;;UBERON:0000055 | |is_a=DOID:4;;EFO:0002091;;FF:0000003;;FF:0000210;;UBERON:0000055 | ||
|is_obsolete= | |||
|library_id=CNhs11852 | |||
|library_id_phase_based=2:CNhs11852 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10727 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10727 | |||
|name=lymphangiectasia cell line:DS-1 | |name=lymphangiectasia cell line:DS-1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 42: | Line 59: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11852,LSID830,release010,COMPLETED | |profile_hcage=CNhs11852,LSID830,release010,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.0156743210601423,0,-0.0751913705827085,0.064996958459854,0,0,0,0,0,0,0,0,0,0,0.252961355161605,0,0,0.223852317505244,0,0,0,0,0.202170761610805,0.454582715194748,0,0,0.0692141718319432,0,0,0,0,0,0,0,0,0,0,0,0,0.102774163420043,0.0306788948141562,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.144643709026244,0,0,0,0.201436724038002,0,0,0.20108545806751,0,0,0,0,0,0,0,0,0,0,0.078316005475075,0,0,0.078316005475075,0,0,0,0,0,0,0,0,0,0,-0.0064215246958722,0,0,0,-0.00538444264227589,-0.061982860055565,0,0,0.0391580027375375,0,0.154926003923898,0.132400454920541,0,0,0,0,0,0,0,0,0,0,0.173407235318524,0,0,0,0,0,0,0.741692949006135,0,0,0,-0.0322486825139818,-0.176155537420775,0,0,0.18068529002135,0,0,0 | |||
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| |||
|rna_box=110 | |rna_box=110 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
Line 57: | Line 77: | ||
|rna_weight_ug=37.58402 | |rna_weight_ug=37.58402 | ||
|sample_age= | |sample_age= | ||
|sample_category=cell lines | |||
|sample_cell_catalog=CRL-11102 | |sample_cell_catalog=CRL-11102 | ||
|sample_cell_line=DS-1 | |sample_cell_line=DS-1 | ||
Line 69: | Line 90: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.98657990851055e-260!GO:0043227;membrane-bound organelle;1.29501899754172e-230!GO:0043231;intracellular membrane-bound organelle;2.6576591856011e-230!GO:0043226;organelle;8.23564618927244e-221!GO:0043229;intracellular organelle;5.01917828422147e-220!GO:0005737;cytoplasm;2.51339154395396e-182!GO:0044422;organelle part;3.89178626828949e-165!GO:0044446;intracellular organelle part;1.3233717970958e-162!GO:0044444;cytoplasmic part;2.1350515822008e-137!GO:0032991;macromolecular complex;1.60533356174885e-113!GO:0044237;cellular metabolic process;2.32458261484536e-107!GO:0044238;primary metabolic process;1.63000243082632e-102!GO:0043170;macromolecule metabolic process;9.46465517108719e-97!GO:0005634;nucleus;4.01156989323444e-95!GO:0030529;ribonucleoprotein complex;1.08664507290661e-93!GO:0044428;nuclear part;2.11687742008418e-87!GO:0043233;organelle lumen;6.08552855245179e-86!GO:0031974;membrane-enclosed lumen;6.08552855245179e-86!GO:0005739;mitochondrion;1.04271626170261e-80!GO:0003723;RNA binding;1.19470604400756e-80!GO:0005515;protein binding;6.39046808782333e-68!GO:0031090;organelle membrane;9.24482470117448e-61!GO:0043283;biopolymer metabolic process;1.86029035396692e-58!GO:0043234;protein complex;2.31080466435734e-58!GO:0006412;translation;5.57827305316894e-57!GO:0006396;RNA processing;8.26419971481965e-56!GO:0005840;ribosome;3.57238232895641e-55!GO:0044429;mitochondrial part;9.11112630434257e-55!GO:0031981;nuclear lumen;9.65075904230743e-54!GO:0019538;protein metabolic process;3.74126208191403e-53!GO:0031967;organelle envelope;1.38095607909845e-50!GO:0044260;cellular macromolecule metabolic process;2.88896314763222e-50!GO:0031975;envelope;3.56692489526914e-50!GO:0010467;gene expression;1.12934770743924e-49!GO:0044267;cellular protein metabolic process;1.40902402621805e-49!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.47574976820361e-49!GO:0003735;structural constituent of ribosome;2.70792507257344e-47!GO:0009058;biosynthetic process;3.37566359747528e-47!GO:0033036;macromolecule localization;2.63147887993595e-46!GO:0009059;macromolecule biosynthetic process;3.43039403556861e-46!GO:0015031;protein transport;4.13044072393535e-45!GO:0044249;cellular biosynthetic process;2.71200137192125e-43!GO:0045184;establishment of protein localization;4.93421916800128e-43!GO:0016071;mRNA metabolic process;5.8113601429351e-43!GO:0008104;protein localization;1.30933818207071e-42!GO:0033279;ribosomal subunit;3.16740759782377e-41!GO:0016043;cellular component organization and biogenesis;4.48143901000165e-39!GO:0046907;intracellular transport;1.03065033465723e-37!GO:0008380;RNA splicing;3.8188709204179e-37!GO:0005829;cytosol;7.60401726733636e-37!GO:0006397;mRNA processing;2.63818732738447e-36!GO:0005740;mitochondrial envelope;3.95600813864675e-35!GO:0006259;DNA metabolic process;4.3265424328222e-35!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.59226597022657e-35!GO:0005654;nucleoplasm;4.31890818338044e-34!GO:0019866;organelle inner membrane;5.86966151887325e-33!GO:0006996;organelle organization and biogenesis;6.22543017345713e-33!GO:0006886;intracellular protein transport;1.21427836167128e-32!GO:0031966;mitochondrial membrane;1.38126680830326e-32!GO:0003676;nucleic acid binding;6.30245211622363e-32!GO:0065003;macromolecular complex assembly;8.51361924101701e-32!GO:0043228;non-membrane-bound organelle;2.20442664668111e-30!GO:0043232;intracellular non-membrane-bound organelle;2.20442664668111e-30!GO:0005743;mitochondrial inner membrane;2.96567990835244e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.19571228175396e-29!GO:0000166;nucleotide binding;6.14795616853587e-29!GO:0051649;establishment of cellular localization;8.9551314191678e-29!GO:0051641;cellular localization;1.74526314181365e-28!GO:0005681;spliceosome;3.1040970895914e-28!GO:0044451;nucleoplasm part;3.43980668424152e-27!GO:0022607;cellular component assembly;4.46702211159369e-27!GO:0007049;cell cycle;7.88984096013804e-27!GO:0044445;cytosolic part;2.15253749785364e-26!GO:0012505;endomembrane system;3.07318172922686e-26!GO:0006119;oxidative phosphorylation;1.10558399798214e-23!GO:0044455;mitochondrial membrane part;1.68514909608957e-23!GO:0044265;cellular macromolecule catabolic process;1.97751426421224e-23!GO:0031980;mitochondrial lumen;3.46895954855401e-23!GO:0005759;mitochondrial matrix;3.46895954855401e-23!GO:0006512;ubiquitin cycle;6.34735110492425e-23!GO:0022402;cell cycle process;3.44876308812278e-22!GO:0016070;RNA metabolic process;3.49842675417739e-22!GO:0016874;ligase activity;1.37434737120322e-21!GO:0015934;large ribosomal subunit;3.26862458579663e-21!GO:0015935;small ribosomal subunit;4.11762397772908e-21!GO:0006974;response to DNA damage stimulus;8.11563683428361e-21!GO:0005730;nucleolus;1.27187153030021e-20!GO:0032553;ribonucleotide binding;1.85439219064474e-20!GO:0032555;purine ribonucleotide binding;1.85439219064474e-20!GO:0005783;endoplasmic reticulum;2.40084110112353e-20!GO:0017076;purine nucleotide binding;2.99661304177785e-20!GO:0016462;pyrophosphatase activity;3.94346353314674e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.5090529348201e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;7.10863692581081e-20!GO:0005694;chromosome;7.87500156015189e-20!GO:0044432;endoplasmic reticulum part;8.15215718598112e-20!GO:0006457;protein folding;1.88636474102891e-19!GO:0005524;ATP binding;3.4029209175613e-19!GO:0022618;protein-RNA complex assembly;3.46306919981888e-19!GO:0032559;adenyl ribonucleotide binding;4.69315910996063e-19!GO:0043285;biopolymer catabolic process;4.73151497128719e-19!GO:0005746;mitochondrial respiratory chain;5.07824334874634e-19!GO:0017111;nucleoside-triphosphatase activity;5.14647461979838e-19!GO:0008134;transcription factor binding;6.98556102969276e-19!GO:0006511;ubiquitin-dependent protein catabolic process;6.98556102969276e-19!GO:0051603;proteolysis involved in cellular protein catabolic process;7.04245834239574e-19!GO:0019941;modification-dependent protein catabolic process;9.53289496939954e-19!GO:0043632;modification-dependent macromolecule catabolic process;9.53289496939954e-19!GO:0030554;adenyl nucleotide binding;1.34404174821801e-18!GO:0044248;cellular catabolic process;2.22377253991788e-18!GO:0044257;cellular protein catabolic process;2.27790189747661e-18!GO:0000278;mitotic cell cycle;2.34632713527901e-18!GO:0043412;biopolymer modification;2.40090588953368e-18!GO:0009057;macromolecule catabolic process;3.04308180833626e-18!GO:0044427;chromosomal part;1.89472948749966e-17!GO:0006281;DNA repair;4.13833442444049e-17!GO:0000502;proteasome complex (sensu Eukaryota);6.78692871685091e-17!GO:0050136;NADH dehydrogenase (quinone) activity;1.28211775934454e-16!GO:0003954;NADH dehydrogenase activity;1.28211775934454e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.28211775934454e-16!GO:0051276;chromosome organization and biogenesis;1.37961686027817e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.78828352185702e-16!GO:0012501;programmed cell death;2.86535900134061e-16!GO:0005761;mitochondrial ribosome;2.87240931507721e-16!GO:0000313;organellar ribosome;2.87240931507721e-16!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.98800689429344e-16!GO:0006915;apoptosis;3.06522170203499e-16!GO:0042254;ribosome biogenesis and assembly;4.00607688658154e-16!GO:0005789;endoplasmic reticulum membrane;4.0157038035118e-16!GO:0008135;translation factor activity, nucleic acid binding;5.02963323642192e-16!GO:0006605;protein targeting;5.47632667221188e-16!GO:0005635;nuclear envelope;8.63518081301897e-16!GO:0031965;nuclear membrane;1.37554652941823e-15!GO:0006464;protein modification process;1.74389865653175e-15!GO:0048770;pigment granule;2.38214346334307e-15!GO:0042470;melanosome;2.38214346334307e-15!GO:0000087;M phase of mitotic cell cycle;2.40254801211975e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.49032147220018e-15!GO:0007067;mitosis;3.08921490862117e-15!GO:0022403;cell cycle phase;3.80519053144065e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;4.39085099861777e-15!GO:0000375;RNA splicing, via transesterification reactions;4.39085099861777e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.39085099861777e-15!GO:0042775;organelle ATP synthesis coupled electron transport;4.98777927250261e-15!GO:0042773;ATP synthesis coupled electron transport;4.98777927250261e-15!GO:0006913;nucleocytoplasmic transport;8.44833405819854e-15!GO:0030964;NADH dehydrogenase complex (quinone);1.09094608692395e-14!GO:0045271;respiratory chain complex I;1.09094608692395e-14!GO:0005747;mitochondrial respiratory chain complex I;1.09094608692395e-14!GO:0051186;cofactor metabolic process;1.37848239841764e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.5378515766487e-14!GO:0008219;cell death;1.86471664972234e-14!GO:0016265;death;1.86471664972234e-14!GO:0051169;nuclear transport;1.95743678022309e-14!GO:0044453;nuclear membrane part;3.20990719574193e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.93198915707208e-14!GO:0016604;nuclear body;4.06860258649789e-14!GO:0016887;ATPase activity;5.04815095014134e-14!GO:0030163;protein catabolic process;5.97829328163604e-14!GO:0048193;Golgi vesicle transport;7.46966980106361e-14!GO:0042623;ATPase activity, coupled;8.22553133721966e-14!GO:0006260;DNA replication;8.66156810562059e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;9.44214473904706e-14!GO:0051301;cell division;1.49799227734581e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;2.82293644733272e-13!GO:0043687;post-translational protein modification;3.20362732704232e-13!GO:0051082;unfolded protein binding;6.31544286798073e-13!GO:0006399;tRNA metabolic process;6.6556173073479e-13!GO:0051726;regulation of cell cycle;9.36979209541558e-13!GO:0000074;regulation of progression through cell cycle;9.7463360869527e-13!GO:0005794;Golgi apparatus;1.0453349132076e-12!GO:0006323;DNA packaging;1.10110760915566e-12!GO:0000279;M phase;1.11076719921426e-12!GO:0009719;response to endogenous stimulus;1.45415071792004e-12!GO:0005643;nuclear pore;3.85787435137662e-12!GO:0003743;translation initiation factor activity;4.35801277391462e-12!GO:0006413;translational initiation;5.68123783043894e-12!GO:0003712;transcription cofactor activity;5.69247032314564e-12!GO:0065002;intracellular protein transport across a membrane;8.46616799187071e-12!GO:0004386;helicase activity;1.49437078162221e-11!GO:0006732;coenzyme metabolic process;2.01457364757658e-11!GO:0009259;ribonucleotide metabolic process;2.82898199384791e-11!GO:0006163;purine nucleotide metabolic process;3.5497042315394e-11!GO:0006403;RNA localization;3.64318793299664e-11!GO:0042981;regulation of apoptosis;3.70723586611616e-11!GO:0050657;nucleic acid transport;4.70711608811694e-11!GO:0051236;establishment of RNA localization;4.70711608811694e-11!GO:0050658;RNA transport;4.70711608811694e-11!GO:0006364;rRNA processing;5.05302414399543e-11!GO:0043067;regulation of programmed cell death;5.58716363875636e-11!GO:0006164;purine nucleotide biosynthetic process;6.04290327710117e-11!GO:0016607;nuclear speck;7.28103587008105e-11!GO:0006446;regulation of translational initiation;7.28103587008105e-11!GO:0008639;small protein conjugating enzyme activity;7.89649594497614e-11!GO:0016072;rRNA metabolic process;8.05110517415331e-11!GO:0009260;ribonucleotide biosynthetic process;1.56208758918415e-10!GO:0004842;ubiquitin-protein ligase activity;1.70681217940114e-10!GO:0017038;protein import;2.4040820654919e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.83455775406163e-10!GO:0004812;aminoacyl-tRNA ligase activity;2.83455775406163e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.83455775406163e-10!GO:0009150;purine ribonucleotide metabolic process;3.20477903336339e-10!GO:0016787;hydrolase activity;3.23497338750261e-10!GO:0008026;ATP-dependent helicase activity;3.64896396437882e-10!GO:0005793;ER-Golgi intermediate compartment;3.66810648644114e-10!GO:0046930;pore complex;4.20407577731265e-10!GO:0019787;small conjugating protein ligase activity;4.64700490783406e-10!GO:0043038;amino acid activation;5.37144775602602e-10!GO:0006418;tRNA aminoacylation for protein translation;5.37144775602602e-10!GO:0043039;tRNA aminoacylation;5.37144775602602e-10!GO:0009152;purine ribonucleotide biosynthetic process;5.42351626638449e-10!GO:0016740;transferase activity;6.44167562028814e-10!GO:0008565;protein transporter activity;7.12487970956797e-10!GO:0065004;protein-DNA complex assembly;9.1482820917639e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.11783186043799e-09!GO:0000785;chromatin;1.1341944105781e-09!GO:0006333;chromatin assembly or disassembly;1.13801492765043e-09!GO:0009056;catabolic process;1.5739502951615e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.64276656262771e-09!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.6954649036561e-09!GO:0016192;vesicle-mediated transport;1.94003274958084e-09!GO:0016779;nucleotidyltransferase activity;2.18604933719544e-09!GO:0003697;single-stranded DNA binding;2.4680042934216e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.93022483261713e-09!GO:0051028;mRNA transport;3.15354212396929e-09!GO:0016568;chromatin modification;3.54014968104966e-09!GO:0030532;small nuclear ribonucleoprotein complex;3.9029471808959e-09!GO:0006793;phosphorus metabolic process;4.76478534829947e-09!GO:0006796;phosphate metabolic process;4.76478534829947e-09!GO:0015078;hydrogen ion transmembrane transporter activity;5.3904297417872e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.90730972469029e-09!GO:0043566;structure-specific DNA binding;8.54860208565786e-09!GO:0007005;mitochondrion organization and biogenesis;9.79216309715645e-09!GO:0051188;cofactor biosynthetic process;1.0580559381307e-08!GO:0009060;aerobic respiration;1.2123420561718e-08!GO:0009142;nucleoside triphosphate biosynthetic process;1.46327911668865e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.46327911668865e-08!GO:0006888;ER to Golgi vesicle-mediated transport;1.7904878261602e-08!GO:0016881;acid-amino acid ligase activity;2.04158505384796e-08!GO:0009199;ribonucleoside triphosphate metabolic process;2.24578556814428e-08!GO:0009141;nucleoside triphosphate metabolic process;2.56066241234704e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.04019266671952e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.04019266671952e-08!GO:0019829;cation-transporting ATPase activity;3.26465474441953e-08!GO:0015986;ATP synthesis coupled proton transport;3.50408233956361e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.50408233956361e-08!GO:0006461;protein complex assembly;3.54931161564089e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.96672218879209e-08!GO:0006366;transcription from RNA polymerase II promoter;4.14922641533302e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.43534831660221e-08!GO:0009144;purine nucleoside triphosphate metabolic process;4.43534831660221e-08!GO:0009055;electron carrier activity;4.54734279620695e-08!GO:0005839;proteasome core complex (sensu Eukaryota);4.56243111514767e-08!GO:0005768;endosome;6.89016224377446e-08!GO:0005773;vacuole;8.44624307943768e-08!GO:0045333;cellular respiration;1.2358771536304e-07!GO:0016310;phosphorylation;1.52320337396442e-07!GO:0051170;nuclear import;1.63993051297546e-07!GO:0006261;DNA-dependent DNA replication;2.00337651527892e-07!GO:0004298;threonine endopeptidase activity;2.26611866706975e-07!GO:0000323;lytic vacuole;2.34758460985194e-07!GO:0005764;lysosome;2.34758460985194e-07!GO:0006754;ATP biosynthetic process;2.66640452287777e-07!GO:0006753;nucleoside phosphate metabolic process;2.66640452287777e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.93059390506251e-07!GO:0006606;protein import into nucleus;3.17289542410895e-07!GO:0046034;ATP metabolic process;5.05714339069298e-07!GO:0032446;protein modification by small protein conjugation;5.16825850108788e-07!GO:0009117;nucleotide metabolic process;5.72127458562358e-07!GO:0000775;chromosome, pericentric region;6.33145672911387e-07!GO:0016469;proton-transporting two-sector ATPase complex;6.61712967000384e-07!GO:0045259;proton-transporting ATP synthase complex;6.61712967000384e-07!GO:0043069;negative regulation of programmed cell death;6.63433468739904e-07!GO:0030120;vesicle coat;6.71988570079796e-07!GO:0030662;coated vesicle membrane;6.71988570079796e-07!GO:0051246;regulation of protein metabolic process;7.55119654111882e-07!GO:0043066;negative regulation of apoptosis;8.38062112346852e-07!GO:0050794;regulation of cellular process;8.78002790167074e-07!GO:0009108;coenzyme biosynthetic process;9.98994527896553e-07!GO:0006099;tricarboxylic acid cycle;1.09448841195985e-06!GO:0046356;acetyl-CoA catabolic process;1.09448841195985e-06!GO:0016567;protein ubiquitination;1.13811994131665e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.20574227396189e-06!GO:0000245;spliceosome assembly;1.38508940854673e-06!GO:0005667;transcription factor complex;1.38821028509841e-06!GO:0044431;Golgi apparatus part;1.39019560442169e-06!GO:0006084;acetyl-CoA metabolic process;1.44734016018728e-06!GO:0006916;anti-apoptosis;1.45191867280357e-06!GO:0000151;ubiquitin ligase complex;1.46003484007681e-06!GO:0003713;transcription coactivator activity;2.01176568949035e-06!GO:0065009;regulation of a molecular function;2.09481372831717e-06!GO:0015630;microtubule cytoskeleton;2.45861368517978e-06!GO:0006334;nucleosome assembly;2.60864970365733e-06!GO:0006613;cotranslational protein targeting to membrane;2.76886354588966e-06!GO:0031497;chromatin assembly;2.89686343635976e-06!GO:0045786;negative regulation of progression through cell cycle;2.91787303634808e-06!GO:0051168;nuclear export;2.9317370334402e-06!GO:0006752;group transfer coenzyme metabolic process;3.0770747169855e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.0770747169855e-06!GO:0048475;coated membrane;3.24840387033179e-06!GO:0030117;membrane coat;3.24840387033179e-06!GO:0003899;DNA-directed RNA polymerase activity;3.2900411107085e-06!GO:0016563;transcription activator activity;3.33495455379722e-06!GO:0048523;negative regulation of cellular process;3.47299673118153e-06!GO:0005819;spindle;4.33370508725591e-06!GO:0000075;cell cycle checkpoint;5.26824323727397e-06!GO:0043623;cellular protein complex assembly;5.71323474193153e-06!GO:0006401;RNA catabolic process;6.11304129034508e-06!GO:0016564;transcription repressor activity;6.11304129034508e-06!GO:0005813;centrosome;6.3189515622588e-06!GO:0051329;interphase of mitotic cell cycle;6.92582954679931e-06!GO:0005762;mitochondrial large ribosomal subunit;8.09240460204516e-06!GO:0000315;organellar large ribosomal subunit;8.09240460204516e-06!GO:0051187;cofactor catabolic process;9.62683567826644e-06!GO:0003714;transcription corepressor activity;1.15026576670311e-05!GO:0009109;coenzyme catabolic process;1.24134991004967e-05!GO:0003724;RNA helicase activity;1.37671353135573e-05!GO:0019899;enzyme binding;1.45190522868838e-05!GO:0005815;microtubule organizing center;1.70720151238777e-05!GO:0007243;protein kinase cascade;1.82298809318917e-05!GO:0031324;negative regulation of cellular metabolic process;1.83197964116052e-05!GO:0000139;Golgi membrane;1.97751925455771e-05!GO:0051325;interphase;2.00522259857168e-05!GO:0008654;phospholipid biosynthetic process;2.16439379250136e-05!GO:0045454;cell redox homeostasis;2.29878624095712e-05!GO:0000314;organellar small ribosomal subunit;2.64339378031905e-05!GO:0005763;mitochondrial small ribosomal subunit;2.64339378031905e-05!GO:0005770;late endosome;2.70116690846484e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.80639130688935e-05!GO:0019222;regulation of metabolic process;3.22986420382749e-05!GO:0005657;replication fork;3.62867642417034e-05!GO:0043021;ribonucleoprotein binding;3.67175168839161e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;4.22133557437297e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;4.22133557437297e-05!GO:0015399;primary active transmembrane transporter activity;4.22133557437297e-05!GO:0005798;Golgi-associated vesicle;4.30202756932534e-05!GO:0007051;spindle organization and biogenesis;4.91868506634636e-05!GO:0048519;negative regulation of biological process;5.53411658623584e-05!GO:0005788;endoplasmic reticulum lumen;5.94964571794824e-05!GO:0008632;apoptotic program;6.1959188746641e-05!GO:0006402;mRNA catabolic process;6.68995083758192e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;7.76522196616562e-05!GO:0006091;generation of precursor metabolites and energy;8.11308691239167e-05!GO:0044452;nucleolar part;8.8333060393639e-05!GO:0043065;positive regulation of apoptosis;9.36285085844576e-05!GO:0006383;transcription from RNA polymerase III promoter;9.72953314402477e-05!GO:0008094;DNA-dependent ATPase activity;9.76185594433262e-05!GO:0006612;protein targeting to membrane;9.90330567937012e-05!GO:0044440;endosomal part;9.90330567937012e-05!GO:0010008;endosome membrane;9.90330567937012e-05!GO:0009165;nucleotide biosynthetic process;0.000101388163747727!GO:0051427;hormone receptor binding;0.000118154990447686!GO:0003729;mRNA binding;0.000135263070755146!GO:0043068;positive regulation of programmed cell death;0.000135637318729599!GO:0008033;tRNA processing;0.000142631738479078!GO:0030384;phosphoinositide metabolic process;0.000145228414309275!GO:0006414;translational elongation;0.000149480582341137!GO:0015992;proton transport;0.000150069233323074!GO:0006818;hydrogen transport;0.000150486790631923!GO:0016853;isomerase activity;0.000157787665553483!GO:0030880;RNA polymerase complex;0.000158594118326263!GO:0005048;signal sequence binding;0.000166656817210833!GO:0004527;exonuclease activity;0.000167664208982486!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000168870726908635!GO:0006302;double-strand break repair;0.000185470780995282!GO:0046489;phosphoinositide biosynthetic process;0.000187899756906925!GO:0003924;GTPase activity;0.000195303717854631!GO:0016363;nuclear matrix;0.00020200672773823!GO:0043681;protein import into mitochondrion;0.000202481247928036!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000203657762476719!GO:0050790;regulation of catalytic activity;0.000218274017037503!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000220582823861433!GO:0033116;ER-Golgi intermediate compartment membrane;0.000227583904010543!GO:0035257;nuclear hormone receptor binding;0.000229797244397614!GO:0016741;transferase activity, transferring one-carbon groups;0.000241327620892155!GO:0003690;double-stranded DNA binding;0.000244783859271442!GO:0000776;kinetochore;0.000264916495970591!GO:0031072;heat shock protein binding;0.000265125206180868!GO:0004674;protein serine/threonine kinase activity;0.000286774016027646!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000301739889624882!GO:0006917;induction of apoptosis;0.000307937594603942!GO:0030176;integral to endoplasmic reticulum membrane;0.000316667626810382!GO:0046474;glycerophospholipid biosynthetic process;0.00032526967717201!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000327981642140811!GO:0000428;DNA-directed RNA polymerase complex;0.000327981642140811!GO:0031988;membrane-bound vesicle;0.000334211155913675!GO:0008186;RNA-dependent ATPase activity;0.000337860189703018!GO:0004576;oligosaccharyl transferase activity;0.000353172499333372!GO:0008168;methyltransferase activity;0.000353290766502336!GO:0004518;nuclease activity;0.00037872905125436!GO:0042802;identical protein binding;0.000384339608752873!GO:0000287;magnesium ion binding;0.000401353770803327!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00042918422302505!GO:0012502;induction of programmed cell death;0.000432543394698388!GO:0009892;negative regulation of metabolic process;0.000445110595788693!GO:0006891;intra-Golgi vesicle-mediated transport;0.000481373967326788!GO:0003678;DNA helicase activity;0.000488867837221792!GO:0006352;transcription initiation;0.000522723212518369!GO:0045045;secretory pathway;0.00054230134274884!GO:0051252;regulation of RNA metabolic process;0.000560331881716477!GO:0031968;organelle outer membrane;0.000590358949934324!GO:0007088;regulation of mitosis;0.00059885369426037!GO:0031323;regulation of cellular metabolic process;0.000599568671692978!GO:0048471;perinuclear region of cytoplasm;0.000601360251925631!GO:0048500;signal recognition particle;0.000607041388250149!GO:0044262;cellular carbohydrate metabolic process;0.000628562680148354!GO:0006310;DNA recombination;0.000629409518984479!GO:0006839;mitochondrial transport;0.000633803467915212!GO:0005525;GTP binding;0.000634546033505547!GO:0005741;mitochondrial outer membrane;0.00065429760438095!GO:0000786;nucleosome;0.00069375882199228!GO:0015980;energy derivation by oxidation of organic compounds;0.00069375882199228!GO:0019867;outer membrane;0.000703436423681264!GO:0043488;regulation of mRNA stability;0.000704854748756833!GO:0043487;regulation of RNA stability;0.000704854748756833!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000714678166027814!GO:0043492;ATPase activity, coupled to movement of substances;0.000723112002934745!GO:0003682;chromatin binding;0.000726881823201581!GO:0008250;oligosaccharyl transferase complex;0.000745948682274856!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000754736739103768!GO:0031982;vesicle;0.000759462346257!GO:0000082;G1/S transition of mitotic cell cycle;0.000770458819596181!GO:0022890;inorganic cation transmembrane transporter activity;0.000782458764158173!GO:0016023;cytoplasmic membrane-bound vesicle;0.000799450789233932!GO:0005637;nuclear inner membrane;0.000838740064906559!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000839435293073664!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000882488817430249!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000882488817430249!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000882488817430249!GO:0051789;response to protein stimulus;0.000883030435825302!GO:0006986;response to unfolded protein;0.000883030435825302!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00090180843653228!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000906410938558235!GO:0000049;tRNA binding;0.000913351965140378!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.000927955389557946!GO:0004004;ATP-dependent RNA helicase activity;0.00095939088315755!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.000967131148434942!GO:0006417;regulation of translation;0.000984131337736836!GO:0051920;peroxiredoxin activity;0.00100325695754375!GO:0008610;lipid biosynthetic process;0.00101922682427557!GO:0003684;damaged DNA binding;0.00102604182809547!GO:0050789;regulation of biological process;0.00103413868006404!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.00105805914695502!GO:0030433;ER-associated protein catabolic process;0.00108225836426363!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.00108225836426363!GO:0006626;protein targeting to mitochondrion;0.0011049017891704!GO:0005684;U2-dependent spliceosome;0.00112202760580905!GO:0008637;apoptotic mitochondrial changes;0.00118749944466063!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00124959331443515!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00124959331443515!GO:0030867;rough endoplasmic reticulum membrane;0.00126127324636903!GO:0016481;negative regulation of transcription;0.00129701007629468!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00133506139582784!GO:0015002;heme-copper terminal oxidase activity;0.00133506139582784!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00133506139582784!GO:0004129;cytochrome-c oxidase activity;0.00133506139582784!GO:0006611;protein export from nucleus;0.00138176900302214!GO:0018196;peptidyl-asparagine modification;0.00139286976570518!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00139286976570518!GO:0030658;transport vesicle membrane;0.00144089729410972!GO:0005885;Arp2/3 protein complex;0.00144899938105368!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00146695531468812!GO:0030127;COPII vesicle coat;0.00148372471480032!GO:0012507;ER to Golgi transport vesicle membrane;0.00148372471480032!GO:0006650;glycerophospholipid metabolic process;0.00148674863463317!GO:0007093;mitotic cell cycle checkpoint;0.00151135133858584!GO:0016491;oxidoreductase activity;0.00152146074071123!GO:0006506;GPI anchor biosynthetic process;0.00158095242997154!GO:0030134;ER to Golgi transport vesicle;0.00159698525170178!GO:0006497;protein amino acid lipidation;0.00160253047393818!GO:0000059;protein import into nucleus, docking;0.00160279709503803!GO:0032508;DNA duplex unwinding;0.00161121608018461!GO:0032392;DNA geometric change;0.00161121608018461!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00161121608018461!GO:0045047;protein targeting to ER;0.00161121608018461!GO:0008234;cysteine-type peptidase activity;0.00167842964775094!GO:0046983;protein dimerization activity;0.00172018736457304!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00173303543696538!GO:0043284;biopolymer biosynthetic process;0.00174569659868986!GO:0008312;7S RNA binding;0.00178911060158719!GO:0009116;nucleoside metabolic process;0.00185776316061694!GO:0030663;COPI coated vesicle membrane;0.00189269894722741!GO:0030126;COPI vesicle coat;0.00189269894722741!GO:0007006;mitochondrial membrane organization and biogenesis;0.00194980692124539!GO:0006405;RNA export from nucleus;0.00207313132483119!GO:0031410;cytoplasmic vesicle;0.00218282187256482!GO:0016251;general RNA polymerase II transcription factor activity;0.00225326418995222!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00225458880983591!GO:0046483;heterocycle metabolic process;0.00226466054790441!GO:0006505;GPI anchor metabolic process;0.00231671756336118!GO:0006268;DNA unwinding during replication;0.0024449507614351!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00253083880695329!GO:0030137;COPI-coated vesicle;0.0025635285496249!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00257219014382987!GO:0046822;regulation of nucleocytoplasmic transport;0.00257917090779706!GO:0032940;secretion by cell;0.0026598451335531!GO:0005876;spindle microtubule;0.00270689368860983!GO:0008139;nuclear localization sequence binding;0.00284335013075767!GO:0030660;Golgi-associated vesicle membrane;0.00300379212334314!GO:0006350;transcription;0.00319586930696973!GO:0006595;polyamine metabolic process;0.00320764019812276!GO:0042770;DNA damage response, signal transduction;0.00320764019812276!GO:0008022;protein C-terminus binding;0.00325323087375266!GO:0046966;thyroid hormone receptor binding;0.0032643805478715!GO:0007059;chromosome segregation;0.00326926745807771!GO:0005774;vacuolar membrane;0.00345953996212658!GO:0005758;mitochondrial intermembrane space;0.00358983944412302!GO:0030133;transport vesicle;0.00360913572783485!GO:0003756;protein disulfide isomerase activity;0.00370094677452323!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.00370094677452323!GO:0046467;membrane lipid biosynthetic process;0.00377308411571108!GO:0031124;mRNA 3'-end processing;0.00430210761288035!GO:0015631;tubulin binding;0.004308745784008!GO:0051098;regulation of binding;0.00431078057606178!GO:0019752;carboxylic acid metabolic process;0.00438331210659939!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00444151572697325!GO:0051052;regulation of DNA metabolic process;0.00462956139871519!GO:0008276;protein methyltransferase activity;0.00480517254313406!GO:0031326;regulation of cellular biosynthetic process;0.00484154458293358!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0048538383176447!GO:0042158;lipoprotein biosynthetic process;0.00486449157890475!GO:0051539;4 iron, 4 sulfur cluster binding;0.00489557358506284!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00501053625390338!GO:0006672;ceramide metabolic process;0.00506109154456803!GO:0006082;organic acid metabolic process;0.00508293955126585!GO:0016126;sterol biosynthetic process;0.00509455981989211!GO:0032561;guanyl ribonucleotide binding;0.00511813094173659!GO:0019001;guanyl nucleotide binding;0.00511813094173659!GO:0007052;mitotic spindle organization and biogenesis;0.00514720698394341!GO:0009112;nucleobase metabolic process;0.00540709042488077!GO:0051087;chaperone binding;0.00544571914474051!GO:0006520;amino acid metabolic process;0.00546906856892774!GO:0006144;purine base metabolic process;0.00577052263196949!GO:0019843;rRNA binding;0.00601741052810774!GO:0031902;late endosome membrane;0.00617591776957165!GO:0016859;cis-trans isomerase activity;0.00617648488390291!GO:0016791;phosphoric monoester hydrolase activity;0.00617648488390291!GO:0006007;glucose catabolic process;0.00636489942407003!GO:0032200;telomere organization and biogenesis;0.00637582341204855!GO:0000723;telomere maintenance;0.00637582341204855!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00639975902532209!GO:0033673;negative regulation of kinase activity;0.00639975902532209!GO:0006469;negative regulation of protein kinase activity;0.00639975902532209!GO:0007034;vacuolar transport;0.00650226483414732!GO:0031252;leading edge;0.00657661910757182!GO:0009451;RNA modification;0.00657903038393067!GO:0009124;nucleoside monophosphate biosynthetic process;0.00659295141551645!GO:0009123;nucleoside monophosphate metabolic process;0.00659295141551645!GO:0005769;early endosome;0.00662078760817485!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0068558189830279!GO:0051338;regulation of transferase activity;0.00701437406806958!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00702109899356758!GO:0043549;regulation of kinase activity;0.00719820099668252!GO:0031970;organelle envelope lumen;0.00726290010687429!GO:0043414;biopolymer methylation;0.00731960693144619!GO:0032259;methylation;0.00733324821855435!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00739037364109524!GO:0006270;DNA replication initiation;0.00747938297105398!GO:0010468;regulation of gene expression;0.00768623109991195!GO:0044437;vacuolar part;0.00768623109991195!GO:0016584;nucleosome positioning;0.00772833925631554!GO:0043022;ribosome binding;0.00776640872943841!GO:0003746;translation elongation factor activity;0.00803753672136154!GO:0051348;negative regulation of transferase activity;0.00839646700344388!GO:0051540;metal cluster binding;0.00849879059749524!GO:0051536;iron-sulfur cluster binding;0.00849879059749524!GO:0043433;negative regulation of transcription factor activity;0.00862703658185483!GO:0032507;maintenance of cellular protein localization;0.0086608063286171!GO:0043621;protein self-association;0.00904454239604363!GO:0031625;ubiquitin protein ligase binding;0.00914000913506894!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00919950046106211!GO:0008408;3'-5' exonuclease activity;0.00928621581614993!GO:0046519;sphingoid metabolic process;0.00930819701837594!GO:0005765;lysosomal membrane;0.00930819701837594!GO:0006984;ER-nuclear signaling pathway;0.00930819701837594!GO:0016272;prefoldin complex;0.00932598090134217!GO:0016197;endosome transport;0.00957904064623747!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00964653525365587!GO:0019210;kinase inhibitor activity;0.00971516180013194!GO:0003711;transcription elongation regulator activity;0.00998131184436172!GO:0051059;NF-kappaB binding;0.010296588386979!GO:0004860;protein kinase inhibitor activity;0.0103170399991231!GO:0006778;porphyrin metabolic process;0.0103580403381016!GO:0033013;tetrapyrrole metabolic process;0.0103580403381016!GO:0048487;beta-tubulin binding;0.010437428286684!GO:0045859;regulation of protein kinase activity;0.0106180584230822!GO:0000922;spindle pole;0.0106484061827231!GO:0008629;induction of apoptosis by intracellular signals;0.0111807609244931!GO:0006284;base-excision repair;0.0120812188819195!GO:0004003;ATP-dependent DNA helicase activity;0.0122274191832735!GO:0003725;double-stranded RNA binding;0.0124727406993999!GO:0019783;small conjugating protein-specific protease activity;0.0124730821780824!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0124945495743946!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0126514353227081!GO:0009303;rRNA transcription;0.0129371631714364!GO:0009161;ribonucleoside monophosphate metabolic process;0.0131162547433084!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0131162547433084!GO:0045185;maintenance of protein localization;0.013142377378623!GO:0047485;protein N-terminus binding;0.013368229955339!GO:0050662;coenzyme binding;0.0135274868500448!GO:0042393;histone binding;0.0136932218405321!GO:0000118;histone deacetylase complex;0.0140219410473183!GO:0006487;protein amino acid N-linked glycosylation;0.0144097621650078!GO:0015923;mannosidase activity;0.0145739462032908!GO:0016301;kinase activity;0.0146294611553161!GO:0000910;cytokinesis;0.0147199714099382!GO:0000209;protein polyubiquitination;0.0148569197952846!GO:0006289;nucleotide-excision repair;0.0150004070906038!GO:0048522;positive regulation of cellular process;0.015001058533364!GO:0007017;microtubule-based process;0.0151913528148775!GO:0043130;ubiquitin binding;0.0151913528148775!GO:0032182;small conjugating protein binding;0.0151913528148775!GO:0008180;signalosome;0.0157921212654671!GO:0004843;ubiquitin-specific protease activity;0.0161313535468345!GO:0000781;chromosome, telomeric region;0.0162638927298415!GO:0004532;exoribonuclease activity;0.0164177156160821!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0164177156160821!GO:0001836;release of cytochrome c from mitochondria;0.0165666015411294!GO:0051651;maintenance of cellular localization;0.0167329103257445!GO:0030508;thiol-disulfide exchange intermediate activity;0.016881714248411!GO:0043596;nuclear replication fork;0.0169522278631238!GO:0006779;porphyrin biosynthetic process;0.0169754677112229!GO:0033014;tetrapyrrole biosynthetic process;0.0169754677112229!GO:0005669;transcription factor TFIID complex;0.0174761659676681!GO:0007040;lysosome organization and biogenesis;0.0177455355881831!GO:0031570;DNA integrity checkpoint;0.0184995998523131!GO:0006695;cholesterol biosynthetic process;0.0186115472790983!GO:0006730;one-carbon compound metabolic process;0.0188618067722432!GO:0006378;mRNA polyadenylation;0.0190814954387964!GO:0005874;microtubule;0.0190814954387964!GO:0004659;prenyltransferase activity;0.0190814954387964!GO:0005996;monosaccharide metabolic process;0.0194677023211012!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0195426085685408!GO:0010257;NADH dehydrogenase complex assembly;0.0195426085685408!GO:0033108;mitochondrial respiratory chain complex assembly;0.0195426085685408!GO:0007050;cell cycle arrest;0.0195426085685408!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0199641568903818!GO:0016311;dephosphorylation;0.0199766547369825!GO:0008536;Ran GTPase binding;0.0200113511642186!GO:0019318;hexose metabolic process;0.02029051601809!GO:0031301;integral to organelle membrane;0.0202966638331409!GO:0000152;nuclear ubiquitin ligase complex;0.0205440738927768!GO:0031123;RNA 3'-end processing;0.0205917020899197!GO:0005832;chaperonin-containing T-complex;0.0206435622841902!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0209446210458991!GO:0008320;protein transmembrane transporter activity;0.0209446210458991!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0216855914847215!GO:0007264;small GTPase mediated signal transduction;0.0217543130744702!GO:0005869;dynactin complex;0.0217680265202479!GO:0050178;phenylpyruvate tautomerase activity;0.0217763855048923!GO:0000339;RNA cap binding;0.0225811281577984!GO:0006516;glycoprotein catabolic process;0.0231898776946563!GO:0004221;ubiquitin thiolesterase activity;0.023207628480757!GO:0016790;thiolester hydrolase activity;0.0236386370319674!GO:0007041;lysosomal transport;0.0237994278512967!GO:0009889;regulation of biosynthetic process;0.023887033973185!GO:0006096;glycolysis;0.0240657275438841!GO:0022415;viral reproductive process;0.024180865355902!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0251374454417414!GO:0008287;protein serine/threonine phosphatase complex;0.0252155698304119!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0252623964949157!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0252623964949157!GO:0009126;purine nucleoside monophosphate metabolic process;0.0252623964949157!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0252623964949157!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0252623964949157!GO:0006338;chromatin remodeling;0.0253435496151945!GO:0044438;microbody part;0.0253435496151945!GO:0044439;peroxisomal part;0.0253435496151945!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0255015441201121!GO:0015036;disulfide oxidoreductase activity;0.025546921709606!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0257139851586113!GO:0006275;regulation of DNA replication;0.0257303494233851!GO:0022884;macromolecule transmembrane transporter activity;0.0260920330648496!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0260920330648496!GO:0006400;tRNA modification;0.0262871608884984!GO:0042168;heme metabolic process;0.0267406748645549!GO:0008538;proteasome activator activity;0.0273328117020781!GO:0006376;mRNA splice site selection;0.0275307178239082!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0275307178239082!GO:0006220;pyrimidine nucleotide metabolic process;0.0277576175431994!GO:0046979;TAP2 binding;0.0278251628304453!GO:0046977;TAP binding;0.0278251628304453!GO:0046978;TAP1 binding;0.0278251628304453!GO:0006596;polyamine biosynthetic process;0.0279568803704022!GO:0046982;protein heterodimerization activity;0.0283193782991935!GO:0032039;integrator complex;0.0283300465244987!GO:0022406;membrane docking;0.0294830735378647!GO:0048278;vesicle docking;0.0294830735378647!GO:0030118;clathrin coat;0.0299243774825883!GO:0004722;protein serine/threonine phosphatase activity;0.0299243774825883!GO:0004540;ribonuclease activity;0.0300400710550672!GO:0007030;Golgi organization and biogenesis;0.0302929861985532!GO:0006118;electron transport;0.0302929861985532!GO:0005975;carbohydrate metabolic process;0.0305453985214939!GO:0051336;regulation of hydrolase activity;0.0308850592898189!GO:0016788;hydrolase activity, acting on ester bonds;0.0309311854184976!GO:0040029;regulation of gene expression, epigenetic;0.031312487053676!GO:0000178;exosome (RNase complex);0.0316815606591905!GO:0051101;regulation of DNA binding;0.0318369319155502!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0319779844687787!GO:0035267;NuA4 histone acetyltransferase complex;0.0325492864451462!GO:0003923;GPI-anchor transamidase activity;0.0327955795814623!GO:0016255;attachment of GPI anchor to protein;0.0327955795814623!GO:0042765;GPI-anchor transamidase complex;0.0327955795814623!GO:0005744;mitochondrial inner membrane presequence translocase complex;0.0331817575732856!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.0331817575732856!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.0331817575732856!GO:0030149;sphingolipid catabolic process;0.0333589635985047!GO:0046112;nucleobase biosynthetic process;0.0334758163604303!GO:0031647;regulation of protein stability;0.0343025178368943!GO:0006354;RNA elongation;0.0345621930829901!GO:0008097;5S rRNA binding;0.0346023074759941!GO:0004177;aminopeptidase activity;0.0346172339776422!GO:0005652;nuclear lamina;0.0349921359981898!GO:0045069;regulation of viral genome replication;0.0354705161511184!GO:0030968;unfolded protein response;0.0354705161511184!GO:0005791;rough endoplasmic reticulum;0.0355675734192471!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0356854742304234!GO:0004721;phosphoprotein phosphatase activity;0.0357089272936554!GO:0042054;histone methyltransferase activity;0.0357089272936554!GO:0006643;membrane lipid metabolic process;0.0357089272936554!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0357089272936554!GO:0051656;establishment of organelle localization;0.0357089272936554!GO:0000228;nuclear chromosome;0.0357089272936554!GO:0005521;lamin binding;0.0357089272936554!GO:0033367;protein localization in mast cell secretory granule;0.0357089272936554!GO:0033365;protein localization in organelle;0.0357089272936554!GO:0033371;T cell secretory granule organization and biogenesis;0.0357089272936554!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0357089272936554!GO:0033375;protease localization in T cell secretory granule;0.0357089272936554!GO:0042629;mast cell granule;0.0357089272936554!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0357089272936554!GO:0033364;mast cell secretory granule organization and biogenesis;0.0357089272936554!GO:0033380;granzyme B localization in T cell secretory granule;0.0357089272936554!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0357089272936554!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0357089272936554!GO:0033368;protease localization in mast cell secretory granule;0.0357089272936554!GO:0033366;protein localization in secretory granule;0.0357089272936554!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0357089272936554!GO:0033374;protein localization in T cell secretory granule;0.0357089272936554!GO:0006458;'de novo' protein folding;0.0357089272936554!GO:0051084;'de novo' posttranslational protein folding;0.0357089272936554!GO:0007033;vacuole organization and biogenesis;0.0362825911750638!GO:0006467;protein thiol-disulfide exchange;0.0363801180461548!GO:0003887;DNA-directed DNA polymerase activity;0.0363973559009643!GO:0030518;steroid hormone receptor signaling pathway;0.0365643655493295!GO:0008017;microtubule binding;0.0365643655493295!GO:0051287;NAD binding;0.0366814615018906!GO:0031903;microbody membrane;0.0368267145619826!GO:0005778;peroxisomal membrane;0.0368267145619826!GO:0065007;biological regulation;0.0369052377915912!GO:0017134;fibroblast growth factor binding;0.0371702991062917!GO:0004563;beta-N-acetylhexosaminidase activity;0.0371876665265758!GO:0000726;non-recombinational repair;0.0371876665265758!GO:0043281;regulation of caspase activity;0.0377469356976329!GO:0016407;acetyltransferase activity;0.0382185726950486!GO:0051235;maintenance of localization;0.0383058121080061!GO:0005784;translocon complex;0.0387181946283789!GO:0000738;DNA catabolic process, exonucleolytic;0.0390439867179658!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0392413851167787!GO:0030911;TPR domain binding;0.0397706022254812!GO:0009308;amine metabolic process;0.0401183876682089!GO:0012506;vesicle membrane;0.0406984649147208!GO:0005680;anaphase-promoting complex;0.0408069892380175!GO:0000725;recombinational repair;0.0415064869044391!GO:0000724;double-strand break repair via homologous recombination;0.0415064869044391!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0419097092168205!GO:0043189;H4/H2A histone acetyltransferase complex;0.0420490035448725!GO:0006783;heme biosynthetic process;0.0424547506647136!GO:0044275;cellular carbohydrate catabolic process;0.0424735317628269!GO:0006904;vesicle docking during exocytosis;0.0428003419090293!GO:0019904;protein domain specific binding;0.0428600620380888!GO:0006665;sphingolipid metabolic process;0.0428600620380888!GO:0000123;histone acetyltransferase complex;0.0430815377134734!GO:0006013;mannose metabolic process;0.0430815377134734!GO:0046128;purine ribonucleoside metabolic process;0.0430815377134734!GO:0042278;purine nucleoside metabolic process;0.0430815377134734!GO:0000030;mannosyltransferase activity;0.0431957705934282!GO:0007004;telomere maintenance via telomerase;0.0435873145494968!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0438858630377714!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0443365779307745!GO:0006807;nitrogen compound metabolic process;0.0444595529826039!GO:0019883;antigen processing and presentation of endogenous antigen;0.0446079228288184!GO:0031577;spindle checkpoint;0.0447758913663596!GO:0004559;alpha-mannosidase activity;0.0448814074416459!GO:0006892;post-Golgi vesicle-mediated transport;0.0448946596165408!GO:0046365;monosaccharide catabolic process;0.0451420887270906!GO:0016279;protein-lysine N-methyltransferase activity;0.0455358283249441!GO:0018024;histone-lysine N-methyltransferase activity;0.0455358283249441!GO:0016278;lysine N-methyltransferase activity;0.0455358283249441!GO:0000077;DNA damage checkpoint;0.0456933981413261!GO:0005047;signal recognition particle binding;0.0466319184272364!GO:0019511;peptidyl-proline hydroxylation;0.0466636832247692!GO:0018208;peptidyl-proline modification;0.0466636832247692!GO:0019471;4-hydroxyproline metabolic process;0.0466636832247692!GO:0018401;peptidyl-proline hydroxylation to 4-hydroxy-L-proline;0.0466636832247692!GO:0005092;GDP-dissociation inhibitor activity;0.0468581427708472!GO:0000819;sister chromatid segregation;0.0469642448691072!GO:0051053;negative regulation of DNA metabolic process;0.0473062252062329!GO:0030132;clathrin coat of coated pit;0.0478255525464442!GO:0045947;negative regulation of translational initiation;0.0478688921646791!GO:0006950;response to stress;0.0488222037434759!GO:0007265;Ras protein signal transduction;0.0491753260321836!GO:0000070;mitotic sister chromatid segregation;0.0492724502946457!GO:0003709;RNA polymerase III transcription factor activity;0.0493133110477144 | |||
|sample_id=10727 | |sample_id=10727 | ||
|sample_note= | |sample_note= | ||
Line 76: | Line 98: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=POU2F1..3:1.94087945873;AIRE:1.76029091116;TOPORS:1.11812828986;LMO2:1.03603216165;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.01936888845;MYB:1.0109278052;MYOD1:1.00303535579;PITX1..3:0.991150682828;POU5F1:0.977685903547;FOX{I1,J2}:0.971581331786;ZNF148:0.932107983991;NFY{A,B,C}:0.931003110333;AHR_ARNT_ARNT2:0.893188197413;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.877455334038;NKX6-1,2:0.862933230552;NR5A1,2:0.853329383848;E2F1..5:0.846692520098;VSX1,2:0.841152424811;HOX{A6,A7,B6,B7}:0.81362941719;BREu{core}:0.810303885818;PAX4:0.804376380388;PAX6:0.756371243795;ELF1,2,4:0.750958044239;GFI1:0.741434671214;YY1:0.725851223573;OCT4_SOX2{dimer}:0.721103502821;FOXP1:0.693800524663;FOXA2:0.675384343743;RUNX1..3:0.659623263234;HOX{A4,D4}:0.576782690146;NFKB1_REL_RELA:0.573738347655;RORA:0.572525405341;ATF6:0.539288327839;PAX8:0.521890816397;HOXA9_MEIS1:0.51093638957;ELK1,4_GABP{A,B1}:0.500306781912;NFIX:0.468395131906;CREB1:0.437824848245;IRF1,2:0.411958285567;NRF1:0.402339059916;ZNF143:0.393434622272;POU1F1:0.392656066082;bHLH_family:0.337239603488;ZEB1:0.332469926678;FOX{F1,F2,J1}:0.330151223459;GCM1,2:0.329813379066;DMAP1_NCOR{1,2}_SMARC:0.274533633835;GATA6:0.263309269747;PAX2:0.254094137309;SNAI1..3:0.249798376384;HES1:0.24356915923;FOXD3:0.220856987155;IKZF2:0.217142167398;ZBTB16:0.207461036119;SPI1:0.20652311388;FOXO1,3,4:0.206001257467;EVI1:0.2037127545;ATF5_CREB3:0.183138754727;FOXP3:0.173096107313;RFX2..5_RFXANK_RFXAP:0.168602182692;HNF4A_NR2F1,2:0.166219768605;TGIF1:0.163017088605;CRX:0.120287041964;FOXQ1:0.119823450533;MEF2{A,B,C,D}:0.107753184799;FOXN1:0.093350968708;AR:0.0885256109624;HIF1A:0.0861002129704;STAT5{A,B}:0.0282438412617;SOX5:0.0271213664073;ONECUT1,2:0.0229984656976;ETS1,2:0.0182222056371;PAX3,7:0.0100287040199;TP53:-0.00448113059414;SPIB:-0.00565975888206;CDX1,2,4:-0.0152312329509;HOX{A5,B5}:-0.0194809294153;IRF7:-0.037593556622;PBX1:-0.0498665096715;ZNF384:-0.0507943144386;NR6A1:-0.0523404746544;FOX{D1,D2}:-0.0674663164255;ZIC1..3:-0.181145230788;NFIL3:-0.194024574582;CEBPA,B_DDIT3:-0.197647055423;SOX{8,9,10}:-0.221050683759;POU3F1..4:-0.221174411011;PAX1,9:-0.252235876522;ATF4:-0.258208124127;FOSL2:-0.284562002436;HNF1A:-0.285278034252;LHX3,4:-0.303714598642;STAT2,4,6:-0.305964803046;MYFfamily:-0.333131027557;BPTF:-0.339802673247;MAFB:-0.356469841482;LEF1_TCF7_TCF7L1,2:-0.367428769162;UFEwm:-0.377100693879;NHLH1,2:-0.39261812707;SRF:-0.394696394662;NKX3-2:-0.407315424952;ARID5B:-0.407862644213;TLX2:-0.418001535784;TEF:-0.428435118813;NKX2-2,8:-0.43720000103;FOS_FOS{B,L1}_JUN{B,D}:-0.448554993697;CDC5L:-0.450561905603;NANOG{mouse}:-0.455138946048;HLF:-0.46617649163;TAL1_TCF{3,4,12}:-0.480317011886;EBF1:-0.482290822859;RFX1:-0.485385024974;ESR1:-0.49103690467;HMGA1,2:-0.503970244368;CUX2:-0.510267677178;ALX4:-0.530411003239;NFE2:-0.536727331294;ZFP161:-0.568149412358;SREBF1,2:-0.573336127749;PRRX1,2:-0.578518885242;SOX17:-0.58561845847;BACH2:-0.586789353344;DBP:-0.592775133317;REST:-0.597951292927;FOXL1:-0.601245346732;POU6F1:-0.608898995357;TFDP1:-0.624582173975;ALX1:-0.63187750302;TBP:-0.64238742235;ADNP_IRX_SIX_ZHX:-0.663972315976;GATA4:-0.670729977611;STAT1,3:-0.677961726944;JUN:-0.685687408833;HAND1,2:-0.69514913709;ESRRA:-0.70574345669;NFE2L2:-0.707796772232;EN1,2:-0.747224874724;SPZ1:-0.772987994305;ZNF423:-0.781850430661;XBP1:-0.78805914448;GTF2A1,2:-0.807685568006;RXRA_VDR{dimer}:-0.814779549593;T:-0.819127226446;HBP1_HMGB_SSRP1_UBTF:-0.839881247724;MYBL2:-0.848322593286;NANOG:-0.849794147386;SMAD1..7,9:-0.859166673185;NKX2-3_NKX2-5:-0.871906149125;RXR{A,B,G}:-0.87835870099;SP1:-0.881851908491;TFAP2B:-0.892311829478;IKZF1:-0.903967217593;TBX4,5:-0.917163048984;TFAP4:-0.923215133186;NKX3-1:-0.930525602393;NFE2L1:-0.933449995217;GZF1:-0.936904607769;FOXM1:-0.949475705697;HSF1,2:-0.967465121947;NKX2-1,4:-0.972024210413;PATZ1:-0.974241920285;ZBTB6:-0.988050718095;RREB1:-0.996251226352;GFI1B:-0.999476246997;EP300:-1.00008030732;ZNF238:-1.01935571755;NFATC1..3:-1.03460260684;PPARG:-1.03604918727;GTF2I:-1.04302755987;PDX1:-1.0612502411;TFAP2{A,C}:-1.06361890311;NR1H4:-1.07967554483;MED-1{core}:-1.09346889377;MZF1:-1.0970380773;HIC1:-1.13356192136;SOX2:-1.14240838165;XCPE1{core}:-1.14323126242;MAZ:-1.15754729202;PRDM1:-1.16511928999;MTF1:-1.17241388001;KLF4:-1.1939258306;TEAD1:-1.19893492658;ATF2:-1.24068564333;MTE{core}:-1.25384328874;RBPJ:-1.26247279264;HMX1:-1.34115692218;GLI1..3:-1.34935390795;PAX5:-1.38229470517;EGR1..3:-1.41243655362;TLX1..3_NFIC{dimer}:-1.4471779454;TFCP2:-1.63938643436;NR3C1:-1.90858019568 | |top_motifs=POU2F1..3:1.94087945873;AIRE:1.76029091116;TOPORS:1.11812828986;LMO2:1.03603216165;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.01936888845;MYB:1.0109278052;MYOD1:1.00303535579;PITX1..3:0.991150682828;POU5F1:0.977685903547;FOX{I1,J2}:0.971581331786;ZNF148:0.932107983991;NFY{A,B,C}:0.931003110333;AHR_ARNT_ARNT2:0.893188197413;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.877455334038;NKX6-1,2:0.862933230552;NR5A1,2:0.853329383848;E2F1..5:0.846692520098;VSX1,2:0.841152424811;HOX{A6,A7,B6,B7}:0.81362941719;BREu{core}:0.810303885818;PAX4:0.804376380388;PAX6:0.756371243795;ELF1,2,4:0.750958044239;GFI1:0.741434671214;YY1:0.725851223573;OCT4_SOX2{dimer}:0.721103502821;FOXP1:0.693800524663;FOXA2:0.675384343743;RUNX1..3:0.659623263234;HOX{A4,D4}:0.576782690146;NFKB1_REL_RELA:0.573738347655;RORA:0.572525405341;ATF6:0.539288327839;PAX8:0.521890816397;HOXA9_MEIS1:0.51093638957;ELK1,4_GABP{A,B1}:0.500306781912;NFIX:0.468395131906;CREB1:0.437824848245;IRF1,2:0.411958285567;NRF1:0.402339059916;ZNF143:0.393434622272;POU1F1:0.392656066082;bHLH_family:0.337239603488;ZEB1:0.332469926678;FOX{F1,F2,J1}:0.330151223459;GCM1,2:0.329813379066;DMAP1_NCOR{1,2}_SMARC:0.274533633835;GATA6:0.263309269747;PAX2:0.254094137309;SNAI1..3:0.249798376384;HES1:0.24356915923;FOXD3:0.220856987155;IKZF2:0.217142167398;ZBTB16:0.207461036119;SPI1:0.20652311388;FOXO1,3,4:0.206001257467;EVI1:0.2037127545;ATF5_CREB3:0.183138754727;FOXP3:0.173096107313;RFX2..5_RFXANK_RFXAP:0.168602182692;HNF4A_NR2F1,2:0.166219768605;TGIF1:0.163017088605;CRX:0.120287041964;FOXQ1:0.119823450533;MEF2{A,B,C,D}:0.107753184799;FOXN1:0.093350968708;AR:0.0885256109624;HIF1A:0.0861002129704;STAT5{A,B}:0.0282438412617;SOX5:0.0271213664073;ONECUT1,2:0.0229984656976;ETS1,2:0.0182222056371;PAX3,7:0.0100287040199;TP53:-0.00448113059414;SPIB:-0.00565975888206;CDX1,2,4:-0.0152312329509;HOX{A5,B5}:-0.0194809294153;IRF7:-0.037593556622;PBX1:-0.0498665096715;ZNF384:-0.0507943144386;NR6A1:-0.0523404746544;FOX{D1,D2}:-0.0674663164255;ZIC1..3:-0.181145230788;NFIL3:-0.194024574582;CEBPA,B_DDIT3:-0.197647055423;SOX{8,9,10}:-0.221050683759;POU3F1..4:-0.221174411011;PAX1,9:-0.252235876522;ATF4:-0.258208124127;FOSL2:-0.284562002436;HNF1A:-0.285278034252;LHX3,4:-0.303714598642;STAT2,4,6:-0.305964803046;MYFfamily:-0.333131027557;BPTF:-0.339802673247;MAFB:-0.356469841482;LEF1_TCF7_TCF7L1,2:-0.367428769162;UFEwm:-0.377100693879;NHLH1,2:-0.39261812707;SRF:-0.394696394662;NKX3-2:-0.407315424952;ARID5B:-0.407862644213;TLX2:-0.418001535784;TEF:-0.428435118813;NKX2-2,8:-0.43720000103;FOS_FOS{B,L1}_JUN{B,D}:-0.448554993697;CDC5L:-0.450561905603;NANOG{mouse}:-0.455138946048;HLF:-0.46617649163;TAL1_TCF{3,4,12}:-0.480317011886;EBF1:-0.482290822859;RFX1:-0.485385024974;ESR1:-0.49103690467;HMGA1,2:-0.503970244368;CUX2:-0.510267677178;ALX4:-0.530411003239;NFE2:-0.536727331294;ZFP161:-0.568149412358;SREBF1,2:-0.573336127749;PRRX1,2:-0.578518885242;SOX17:-0.58561845847;BACH2:-0.586789353344;DBP:-0.592775133317;REST:-0.597951292927;FOXL1:-0.601245346732;POU6F1:-0.608898995357;TFDP1:-0.624582173975;ALX1:-0.63187750302;TBP:-0.64238742235;ADNP_IRX_SIX_ZHX:-0.663972315976;GATA4:-0.670729977611;STAT1,3:-0.677961726944;JUN:-0.685687408833;HAND1,2:-0.69514913709;ESRRA:-0.70574345669;NFE2L2:-0.707796772232;EN1,2:-0.747224874724;SPZ1:-0.772987994305;ZNF423:-0.781850430661;XBP1:-0.78805914448;GTF2A1,2:-0.807685568006;RXRA_VDR{dimer}:-0.814779549593;T:-0.819127226446;HBP1_HMGB_SSRP1_UBTF:-0.839881247724;MYBL2:-0.848322593286;NANOG:-0.849794147386;SMAD1..7,9:-0.859166673185;NKX2-3_NKX2-5:-0.871906149125;RXR{A,B,G}:-0.87835870099;SP1:-0.881851908491;TFAP2B:-0.892311829478;IKZF1:-0.903967217593;TBX4,5:-0.917163048984;TFAP4:-0.923215133186;NKX3-1:-0.930525602393;NFE2L1:-0.933449995217;GZF1:-0.936904607769;FOXM1:-0.949475705697;HSF1,2:-0.967465121947;NKX2-1,4:-0.972024210413;PATZ1:-0.974241920285;ZBTB6:-0.988050718095;RREB1:-0.996251226352;GFI1B:-0.999476246997;EP300:-1.00008030732;ZNF238:-1.01935571755;NFATC1..3:-1.03460260684;PPARG:-1.03604918727;GTF2I:-1.04302755987;PDX1:-1.0612502411;TFAP2{A,C}:-1.06361890311;NR1H4:-1.07967554483;MED-1{core}:-1.09346889377;MZF1:-1.0970380773;HIC1:-1.13356192136;SOX2:-1.14240838165;XCPE1{core}:-1.14323126242;MAZ:-1.15754729202;PRDM1:-1.16511928999;MTF1:-1.17241388001;KLF4:-1.1939258306;TEAD1:-1.19893492658;ATF2:-1.24068564333;MTE{core}:-1.25384328874;RBPJ:-1.26247279264;HMX1:-1.34115692218;GLI1..3:-1.34935390795;PAX5:-1.38229470517;EGR1..3:-1.41243655362;TLX1..3_NFIC{dimer}:-1.4471779454;TFCP2:-1.63938643436;NR3C1:-1.90858019568 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10727-110A7;search_select_hide=table117:FF:10727-110A7 | |||
}} | }} |
Latest revision as of 15:02, 3 June 2020
Name: | lymphangiectasia cell line:DS-1 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs11852 |
Sample type: | cell lines |
Genomic View: | UCSC |
RefEX: | Specific genes |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11852
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11852
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.0351 |
10 | 10 | 0.0143 |
100 | 100 | 0.108 |
101 | 101 | 0.405 |
102 | 102 | 0.173 |
103 | 103 | 0.193 |
104 | 104 | 0.743 |
105 | 105 | 0.536 |
106 | 106 | 0.778 |
107 | 107 | 0.225 |
108 | 108 | 0.213 |
109 | 109 | 0.0811 |
11 | 11 | 0.0841 |
110 | 110 | 0.352 |
111 | 111 | 0.0644 |
112 | 112 | 0.622 |
113 | 113 | 0.666 |
114 | 114 | 0.527 |
115 | 115 | 0.565 |
116 | 116 | 0.277 |
117 | 117 | 0.00589 |
118 | 118 | 0.503 |
119 | 119 | 0.304 |
12 | 12 | 0.719 |
120 | 120 | 0.408 |
121 | 121 | 0.853 |
122 | 122 | 0.632 |
123 | 123 | 0.00135 |
124 | 124 | 0.0408 |
125 | 125 | 0.241 |
126 | 126 | 0.36 |
127 | 127 | 0.693 |
128 | 128 | 0.392 |
129 | 129 | 0.389 |
13 | 13 | 0.138 |
130 | 130 | 0.295 |
131 | 131 | 0.51 |
132 | 132 | 0.834 |
133 | 133 | 0.383 |
134 | 134 | 0.598 |
135 | 135 | 0.815 |
136 | 136 | 0.162 |
137 | 137 | 0.778 |
138 | 138 | 0.25 |
139 | 139 | 0.478 |
14 | 14 | 0.921 |
140 | 140 | 0.436 |
141 | 141 | 0.0642 |
142 | 142 | 0.708 |
143 | 143 | 0.0548 |
144 | 144 | 0.685 |
145 | 145 | 0.283 |
146 | 146 | 0.792 |
147 | 147 | 0.167 |
148 | 148 | 0.535 |
149 | 149 | 0.833 |
15 | 15 | 0.298 |
150 | 150 | 0.538 |
151 | 151 | 0.982 |
152 | 152 | 0.959 |
153 | 153 | 0.903 |
154 | 154 | 0.519 |
155 | 155 | 0.0657 |
156 | 156 | 0.151 |
157 | 157 | 0.963 |
158 | 158 | 0.915 |
159 | 159 | 0.13 |
16 | 16 | 0.875 |
160 | 160 | 0.104 |
161 | 161 | 0.852 |
162 | 162 | 0.731 |
163 | 163 | 0.92 |
164 | 164 | 0.575 |
165 | 165 | 0.845 |
166 | 166 | 0.778 |
167 | 167 | 0.135 |
168 | 168 | 0.971 |
169 | 169 | 0.294 |
17 | 17 | 0.751 |
18 | 18 | 0.861 |
19 | 19 | 0.707 |
2 | 2 | 0.755 |
20 | 20 | 0.216 |
21 | 21 | 0.352 |
22 | 22 | 0.924 |
23 | 23 | 0.147 |
24 | 24 | 0.372 |
25 | 25 | 0.127 |
26 | 26 | 0.0918 |
27 | 27 | 0.845 |
28 | 28 | 0.398 |
29 | 29 | 0.0246 |
3 | 3 | 0.169 |
30 | 30 | 0.0829 |
31 | 31 | 0.923 |
32 | 32 | 0.162 |
33 | 33 | 0.844 |
34 | 34 | 0.752 |
35 | 35 | 0.239 |
36 | 36 | 0.0357 |
37 | 37 | 0.135 |
38 | 38 | 0.595 |
39 | 39 | 0.723 |
4 | 4 | 0.031 |
40 | 40 | 0.0871 |
41 | 41 | 0.843 |
42 | 42 | 0.207 |
43 | 43 | 0.199 |
44 | 44 | 0.0852 |
45 | 45 | 0.728 |
46 | 46 | 0.265 |
47 | 47 | 0.0435 |
48 | 48 | 0.0456 |
49 | 49 | 0.00417 |
5 | 5 | 0.715 |
50 | 50 | 0.902 |
51 | 51 | 0.642 |
52 | 52 | 0.273 |
53 | 53 | 0.0752 |
54 | 54 | 0.94 |
55 | 55 | 0.386 |
56 | 56 | 0.401 |
57 | 57 | 0.222 |
58 | 58 | 0.31 |
59 | 59 | 0.631 |
6 | 6 | 0.45 |
60 | 60 | 0.448 |
61 | 61 | 0.0669 |
62 | 62 | 0.383 |
63 | 63 | 0.485 |
64 | 64 | 0.265 |
65 | 65 | 0.767 |
66 | 66 | 1.03717e-5 |
67 | 67 | 0.374 |
68 | 68 | 0.0872 |
69 | 69 | 0.491 |
7 | 7 | 0.11 |
70 | 70 | 0.36 |
71 | 71 | 0.0544 |
72 | 72 | 0.282 |
73 | 73 | 0.371 |
74 | 74 | 0.772 |
75 | 75 | 9.9811e-4 |
76 | 76 | 0.401 |
77 | 77 | 0.572 |
78 | 78 | 0.239 |
79 | 79 | 0.47 |
8 | 8 | 0.322 |
80 | 80 | 0.428 |
81 | 81 | 0.232 |
82 | 82 | 0.578 |
83 | 83 | 0.554 |
84 | 84 | 0.311 |
85 | 85 | 0.732 |
86 | 86 | 0.126 |
87 | 87 | 0.0282 |
88 | 88 | 0.845 |
89 | 89 | 0.583 |
9 | 9 | 0.482 |
90 | 90 | 0.0398 |
91 | 91 | 0.0759 |
92 | 92 | 0.959 |
93 | 93 | 0.598 |
94 | 94 | 0.376 |
95 | 95 | 0.00775 |
96 | 96 | 0.342 |
97 | 97 | 0.0721 |
98 | 98 | 0.427 |
99 | 99 | 0.682 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11852
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
DOID:4 disease
EFO:0002091 biological replicate
FF:0000003 cell line sample
FF:0000210 human sample
UBERON:0000055 vessel
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
DOID: Disease
4 (disease)
UBERON: Anatomy
0000055 (vessel)
0004111 (anatomical conduit)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0001062 (anatomical entity)
0000480 (anatomical group)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA