FF:10824-111C5: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00004982 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX007855;DRR008727;DRZ000152;DRZ001537;DRZ011502;DRZ012887 | ||
| | |ancestors_in_anatomy_facet= | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000255 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:2531,DOID:14566,DOID:0060083,DOID:1240,DOID:1036,DOID:8692 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100737,FF:0102580,FF:0101035,FF:0100740,FF:0100664 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line=FF:0101035 | |fonse_cell_line=FF:0101035 | ||
|fonse_cell_line_closure=FF:0101035 | |fonse_cell_line_closure=FF:0101035 | ||
Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/chronic%2520myelogenous%2520leukemia%2520cell%2520line%253aK562%2520ENCODE%252c%2520biol_rep1.CNhs12334.10824-111C5.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/chronic%2520myelogenous%2520leukemia%2520cell%2520line%253aK562%2520ENCODE%252c%2520biol_rep1.CNhs12334.10824-111C5.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/chronic%2520myelogenous%2520leukemia%2520cell%2520line%253aK562%2520ENCODE%252c%2520biol_rep1.CNhs12334.10824-111C5.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/chronic%2520myelogenous%2520leukemia%2520cell%2520line%253aK562%2520ENCODE%252c%2520biol_rep1.CNhs12334.10824-111C5.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/chronic%2520myelogenous%2520leukemia%2520cell%2520line%253aK562%2520ENCODE%252c%2520biol_rep1.CNhs12334.10824-111C5.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10824-111C5 | |id=FF:10824-111C5 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000210;;FF:0100664 | ||
|is_obsolete= | |||
|library_id=CNhs12334 | |||
|library_id_phase_based=2:CNhs12334 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10824 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10824 | |||
|name=chronic myelogenous leukemia cell line:K562 ENCODE, biol_rep1 | |name=chronic myelogenous leukemia cell line:K562 ENCODE, biol_rep1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12334,LSID913,release011,COMPLETED | |profile_hcage=CNhs12334,LSID913,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=111 | |rna_box=111 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
Line 57: | Line 78: | ||
|rna_weight_ug=53.5624 | |rna_weight_ug=53.5624 | ||
|sample_age=53 | |sample_age=53 | ||
|sample_category=cell lines | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line=K562 | |sample_cell_line=K562 | ||
Line 69: | Line 91: | ||
|sample_ethnicity=unknown | |sample_ethnicity=unknown | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.56400536300114e-310!GO:0043227;membrane-bound organelle;3.02647567286923e-260!GO:0043231;intracellular membrane-bound organelle;5.80402565236845e-260!GO:0043226;organelle;9.05678442883299e-259!GO:0043229;intracellular organelle;4.44500756234062e-258!GO:0044422;organelle part;1.21122705943741e-186!GO:0044446;intracellular organelle part;3.64166699372683e-185!GO:0005737;cytoplasm;4.83785280430398e-178!GO:0044237;cellular metabolic process;2.73925479627451e-134!GO:0044444;cytoplasmic part;3.81799292234006e-132!GO:0005634;nucleus;6.02779625739088e-130!GO:0044238;primary metabolic process;1.53137670272567e-127!GO:0032991;macromolecular complex;9.74025712730792e-125!GO:0043170;macromolecule metabolic process;3.47486447354171e-118!GO:0030529;ribonucleoprotein complex;1.69037733005867e-105!GO:0044428;nuclear part;2.14645661091934e-104!GO:0043233;organelle lumen;1.12067734415981e-100!GO:0031974;membrane-enclosed lumen;1.12067734415981e-100!GO:0003723;RNA binding;6.24804997407913e-95!GO:0005739;mitochondrion;1.1041904440744e-87!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.69835003426207e-74!GO:0043283;biopolymer metabolic process;4.63500237092942e-73!GO:0006396;RNA processing;9.03735641365581e-69!GO:0010467;gene expression;1.49839943996089e-68!GO:0006412;translation;2.06488962779864e-63!GO:0031981;nuclear lumen;1.04757596270692e-62!GO:0043234;protein complex;1.8255835045419e-62!GO:0044429;mitochondrial part;3.69665122017325e-61!GO:0005840;ribosome;2.16938214386969e-60!GO:0005515;protein binding;1.07211438964951e-58!GO:0006259;DNA metabolic process;3.62800180293684e-57!GO:0031967;organelle envelope;2.53816257984915e-56!GO:0031975;envelope;6.91744836781909e-56!GO:0009058;biosynthetic process;3.07908333809901e-53!GO:0003735;structural constituent of ribosome;2.13078578866574e-52!GO:0003676;nucleic acid binding;4.8770334347992e-52!GO:0044249;cellular biosynthetic process;4.92900897058127e-52!GO:0016071;mRNA metabolic process;9.49605667103652e-52!GO:0031090;organelle membrane;1.21660095987472e-51!GO:0019538;protein metabolic process;3.52394798650527e-50!GO:0009059;macromolecule biosynthetic process;5.86685743358679e-48!GO:0008380;RNA splicing;1.20512484166568e-46!GO:0006397;mRNA processing;1.27716208946034e-46!GO:0044267;cellular protein metabolic process;2.25272403573724e-45!GO:0033279;ribosomal subunit;7.37390520522169e-45!GO:0016043;cellular component organization and biogenesis;1.13615079865833e-44!GO:0044260;cellular macromolecule metabolic process;1.19425512154886e-44!GO:0043228;non-membrane-bound organelle;2.23011862638622e-44!GO:0043232;intracellular non-membrane-bound organelle;2.23011862638622e-44!GO:0022613;ribonucleoprotein complex biogenesis and assembly;7.70357428053662e-43!GO:0006996;organelle organization and biogenesis;1.42992854636772e-42!GO:0033036;macromolecule localization;4.0484150518172e-42!GO:0015031;protein transport;1.11179667132026e-40!GO:0005829;cytosol;2.74630660378856e-40!GO:0065003;macromolecular complex assembly;3.51296171777048e-39!GO:0005740;mitochondrial envelope;1.39104849255222e-38!GO:0005654;nucleoplasm;1.95065064465293e-38!GO:0045184;establishment of protein localization;2.40998947980232e-37!GO:0019866;organelle inner membrane;4.14581638701334e-37!GO:0008104;protein localization;4.14581638701334e-37!GO:0007049;cell cycle;3.27661885377842e-36!GO:0016070;RNA metabolic process;6.99337573202419e-36!GO:0046907;intracellular transport;1.85458831124525e-35!GO:0031966;mitochondrial membrane;2.12448496031214e-35!GO:0000166;nucleotide binding;1.02442813159068e-34!GO:0005743;mitochondrial inner membrane;3.0012934987232e-34!GO:0022607;cellular component assembly;5.73442847179441e-34!GO:0005681;spliceosome;7.63889553622571e-34!GO:0005830;cytosolic ribosome (sensu Eukaryota);8.74816171553675e-31!GO:0044445;cytosolic part;1.82427084002674e-30!GO:0006974;response to DNA damage stimulus;2.11820023744816e-30!GO:0044451;nucleoplasm part;9.41385367817387e-30!GO:0006886;intracellular protein transport;1.48072638952718e-29!GO:0005694;chromosome;6.10954744726687e-29!GO:0006281;DNA repair;1.53976971150283e-28!GO:0000278;mitotic cell cycle;4.39759301855167e-28!GO:0031980;mitochondrial lumen;3.44538888151093e-27!GO:0005759;mitochondrial matrix;3.44538888151093e-27!GO:0022402;cell cycle process;7.82049163799612e-27!GO:0051276;chromosome organization and biogenesis;1.12434051772748e-26!GO:0016462;pyrophosphatase activity;1.50844899058587e-26!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.84828300621351e-26!GO:0016817;hydrolase activity, acting on acid anhydrides;2.74014966834077e-26!GO:0017111;nucleoside-triphosphatase activity;3.5744642271902e-26!GO:0005730;nucleolus;1.14158624627739e-25!GO:0044455;mitochondrial membrane part;1.14158624627739e-25!GO:0051649;establishment of cellular localization;3.2876364032142e-25!GO:0044427;chromosomal part;4.45793315280211e-25!GO:0006260;DNA replication;5.00348260402825e-25!GO:0006119;oxidative phosphorylation;7.66608049053376e-25!GO:0051641;cellular localization;2.66131957794321e-24!GO:0016874;ligase activity;3.85107428850915e-24!GO:0022403;cell cycle phase;7.74741214114562e-24!GO:0015934;large ribosomal subunit;1.06821117868669e-23!GO:0032553;ribonucleotide binding;3.181254398983e-23!GO:0032555;purine ribonucleotide binding;3.181254398983e-23!GO:0000087;M phase of mitotic cell cycle;3.72797877799365e-23!GO:0017076;purine nucleotide binding;5.53052688894956e-23!GO:0022618;protein-RNA complex assembly;6.38730418393388e-23!GO:0006457;protein folding;1.02820364314003e-22!GO:0007067;mitosis;1.07898428577614e-22!GO:0032559;adenyl ribonucleotide binding;2.26116543521243e-22!GO:0005524;ATP binding;2.70893938617451e-22!GO:0015935;small ribosomal subunit;2.85859944750648e-22!GO:0030554;adenyl nucleotide binding;7.66084246550981e-22!GO:0042254;ribosome biogenesis and assembly;3.20252280897428e-21!GO:0051301;cell division;6.03884570174415e-21!GO:0000279;M phase;7.21577290961423e-21!GO:0009719;response to endogenous stimulus;1.03575567152209e-20!GO:0006512;ubiquitin cycle;1.08588903307189e-20!GO:0044265;cellular macromolecule catabolic process;3.41872465702485e-20!GO:0006325;establishment and/or maintenance of chromatin architecture;8.44212131635735e-20!GO:0012505;endomembrane system;1.02363326208448e-19!GO:0016887;ATPase activity;1.40378479589531e-19!GO:0051186;cofactor metabolic process;2.45098953755235e-19!GO:0006323;DNA packaging;3.82681161823216e-19!GO:0005746;mitochondrial respiratory chain;7.57407871087427e-19!GO:0008135;translation factor activity, nucleic acid binding;7.91443392679404e-19!GO:0042623;ATPase activity, coupled;1.23203594322201e-18!GO:0005635;nuclear envelope;1.77437013792094e-18!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.27783773920809e-18!GO:0005761;mitochondrial ribosome;3.49330350055788e-18!GO:0000313;organellar ribosome;3.49330350055788e-18!GO:0006399;tRNA metabolic process;5.42858748654352e-18!GO:0044453;nuclear membrane part;5.67037198279441e-18!GO:0009057;macromolecule catabolic process;1.37083070412196e-17!GO:0043285;biopolymer catabolic process;1.79833226549929e-17!GO:0031965;nuclear membrane;3.19456348522017e-17!GO:0044248;cellular catabolic process;3.97041720251374e-17!GO:0050136;NADH dehydrogenase (quinone) activity;4.27746439001983e-17!GO:0003954;NADH dehydrogenase activity;4.27746439001983e-17!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.27746439001983e-17!GO:0000398;nuclear mRNA splicing, via spliceosome;5.26975671448784e-17!GO:0000375;RNA splicing, via transesterification reactions;5.26975671448784e-17!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;5.26975671448784e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;1.49217171119431e-16!GO:0019941;modification-dependent protein catabolic process;1.80632000002134e-16!GO:0043632;modification-dependent macromolecule catabolic process;1.80632000002134e-16!GO:0006511;ubiquitin-dependent protein catabolic process;2.0720197814107e-16!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.39973162692753e-16!GO:0006605;protein targeting;2.39973162692753e-16!GO:0044257;cellular protein catabolic process;3.21894105632745e-16!GO:0005643;nuclear pore;7.41342952244096e-16!GO:0051082;unfolded protein binding;8.45360559107446e-16!GO:0016604;nuclear body;1.53987495951245e-15!GO:0006732;coenzyme metabolic process;2.11239368949653e-15!GO:0042775;organelle ATP synthesis coupled electron transport;2.17277486585541e-15!GO:0042773;ATP synthesis coupled electron transport;2.17277486585541e-15!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.39588341720341e-15!GO:0000502;proteasome complex (sensu Eukaryota);3.06310282540505e-15!GO:0050657;nucleic acid transport;3.39202533402957e-15!GO:0051236;establishment of RNA localization;3.39202533402957e-15!GO:0050658;RNA transport;3.39202533402957e-15!GO:0030964;NADH dehydrogenase complex (quinone);3.51302188919805e-15!GO:0045271;respiratory chain complex I;3.51302188919805e-15!GO:0005747;mitochondrial respiratory chain complex I;3.51302188919805e-15!GO:0004386;helicase activity;3.73567926462183e-15!GO:0006403;RNA localization;4.39567106769303e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.90250872052179e-15!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.13531175111968e-14!GO:0003743;translation initiation factor activity;1.32077352902854e-14!GO:0048770;pigment granule;1.36984765809245e-14!GO:0042470;melanosome;1.36984765809245e-14!GO:0006413;translational initiation;4.92642396103214e-14!GO:0016568;chromatin modification;6.0427632842969e-14!GO:0008134;transcription factor binding;6.41053859602002e-14!GO:0006364;rRNA processing;8.78986518843355e-14!GO:0016072;rRNA metabolic process;1.35008217476109e-13!GO:0046930;pore complex;1.39985656150198e-13!GO:0006913;nucleocytoplasmic transport;1.57327682728729e-13!GO:0006261;DNA-dependent DNA replication;2.00041879614594e-13!GO:0065002;intracellular protein transport across a membrane;2.24334033867482e-13!GO:0051028;mRNA transport;3.05389336049222e-13!GO:0030163;protein catabolic process;3.6354320179699e-13!GO:0008026;ATP-dependent helicase activity;3.95316144088156e-13!GO:0051169;nuclear transport;4.05297526998961e-13!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;5.21670290809754e-13!GO:0004812;aminoacyl-tRNA ligase activity;5.21670290809754e-13!GO:0016875;ligase activity, forming carbon-oxygen bonds;5.21670290809754e-13!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.47581099212727e-13!GO:0043412;biopolymer modification;5.87380626654617e-13!GO:0051188;cofactor biosynthetic process;1.20484774994202e-12!GO:0043038;amino acid activation;1.20484774994202e-12!GO:0006418;tRNA aminoacylation for protein translation;1.20484774994202e-12!GO:0043039;tRNA aminoacylation;1.20484774994202e-12!GO:0005783;endoplasmic reticulum;1.2736525483807e-12!GO:0065004;protein-DNA complex assembly;1.33906939513871e-12!GO:0006446;regulation of translational initiation;2.769653695642e-12!GO:0006333;chromatin assembly or disassembly;2.9094754346178e-12!GO:0044432;endoplasmic reticulum part;2.95168154455154e-12!GO:0006163;purine nucleotide metabolic process;3.18484377544853e-12!GO:0009259;ribonucleotide metabolic process;3.9533693771928e-12!GO:0048193;Golgi vesicle transport;4.36902226531894e-12!GO:0000775;chromosome, pericentric region;4.67732379359439e-12!GO:0016607;nuclear speck;6.78359371548228e-12!GO:0000785;chromatin;2.08693344033175e-11!GO:0006164;purine nucleotide biosynthetic process;3.11250366865888e-11!GO:0016779;nucleotidyltransferase activity;3.1989311545153e-11!GO:0000074;regulation of progression through cell cycle;4.40230431914576e-11!GO:0051726;regulation of cell cycle;4.47628417368099e-11!GO:0009055;electron carrier activity;6.33203452087329e-11!GO:0009150;purine ribonucleotide metabolic process;6.77129193785161e-11!GO:0017038;protein import;6.96864318542927e-11!GO:0015630;microtubule cytoskeleton;7.66502128418328e-11!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.24394178526222e-11!GO:0009260;ribonucleotide biosynthetic process;8.96478645033724e-11!GO:0003712;transcription cofactor activity;9.91313735177916e-11!GO:0016740;transferase activity;1.02613380298889e-10!GO:0006464;protein modification process;2.1317750499915e-10!GO:0008565;protein transporter activity;2.45193662931023e-10!GO:0003697;single-stranded DNA binding;3.23084262192565e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.76181906982013e-10!GO:0006366;transcription from RNA polymerase II promoter;5.89094690224902e-10!GO:0009152;purine ribonucleotide biosynthetic process;6.64278316191404e-10!GO:0006461;protein complex assembly;7.43404400267947e-10!GO:0009108;coenzyme biosynthetic process;7.64112045255908e-10!GO:0043687;post-translational protein modification;8.18658490464801e-10!GO:0007005;mitochondrion organization and biogenesis;8.48240937882045e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.13489169511672e-09!GO:0009056;catabolic process;1.23668821081429e-09!GO:0005794;Golgi apparatus;1.93513912778109e-09!GO:0009141;nucleoside triphosphate metabolic process;2.15850000224472e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.45382723290227e-09!GO:0019222;regulation of metabolic process;3.04486814849773e-09!GO:0009199;ribonucleoside triphosphate metabolic process;3.57043002465455e-09!GO:0016192;vesicle-mediated transport;3.74883826368046e-09!GO:0043566;structure-specific DNA binding;4.90230173626339e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.95749108264245e-09!GO:0005819;spindle;6.23215123485868e-09!GO:0003899;DNA-directed RNA polymerase activity;6.51998953519113e-09!GO:0008094;DNA-dependent ATPase activity;7.25088153605541e-09!GO:0015986;ATP synthesis coupled proton transport;8.32587074758833e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;8.32587074758833e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.3315465010245e-09!GO:0009144;purine nucleoside triphosphate metabolic process;8.3315465010245e-09!GO:0005789;endoplasmic reticulum membrane;9.51788896762793e-09!GO:0008639;small protein conjugating enzyme activity;1.0887939026375e-08!GO:0009142;nucleoside triphosphate biosynthetic process;1.42011873833704e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.42011873833704e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.61466375488277e-08!GO:0012501;programmed cell death;1.61466375488277e-08!GO:0046034;ATP metabolic process;2.0709997211979e-08!GO:0006915;apoptosis;2.22057564741592e-08!GO:0005813;centrosome;2.22378844067256e-08!GO:0009060;aerobic respiration;2.34588309101126e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.82471501918335e-08!GO:0004842;ubiquitin-protein ligase activity;3.13049668796271e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.36674667820528e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.36674667820528e-08!GO:0016741;transferase activity, transferring one-carbon groups;3.37598446465226e-08!GO:0015078;hydrogen ion transmembrane transporter activity;3.37598446465226e-08!GO:0019829;cation-transporting ATPase activity;3.74418796470534e-08!GO:0016787;hydrolase activity;3.95912466912213e-08!GO:0006334;nucleosome assembly;4.20675406410262e-08!GO:0008168;methyltransferase activity;4.20728718520449e-08!GO:0031497;chromatin assembly;4.66804782310406e-08!GO:0000245;spliceosome assembly;4.89194110929513e-08!GO:0006752;group transfer coenzyme metabolic process;4.95731354547036e-08!GO:0019787;small conjugating protein ligase activity;5.18076522514431e-08!GO:0006754;ATP biosynthetic process;6.23839857849244e-08!GO:0006753;nucleoside phosphate metabolic process;6.23839857849244e-08!GO:0000075;cell cycle checkpoint;6.71739792505067e-08!GO:0005815;microtubule organizing center;7.57289685975721e-08!GO:0008219;cell death;7.93094154083579e-08!GO:0016265;death;7.93094154083579e-08!GO:0005657;replication fork;1.06924342612169e-07!GO:0051329;interphase of mitotic cell cycle;1.24548123782194e-07!GO:0051170;nuclear import;1.66268232767921e-07!GO:0045333;cellular respiration;1.69691270333121e-07!GO:0031323;regulation of cellular metabolic process;1.98822933460354e-07!GO:0006084;acetyl-CoA metabolic process;2.1075631999411e-07!GO:0006099;tricarboxylic acid cycle;2.2257032492023e-07!GO:0046356;acetyl-CoA catabolic process;2.2257032492023e-07!GO:0051325;interphase;2.3939415054063e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.73718566011817e-07!GO:0045259;proton-transporting ATP synthase complex;3.10515357469846e-07!GO:0006606;protein import into nucleus;4.48236662039728e-07!GO:0009117;nucleotide metabolic process;4.5641789965449e-07!GO:0008033;tRNA processing;4.64190299052398e-07!GO:0016881;acid-amino acid ligase activity;4.87216574370546e-07!GO:0050794;regulation of cellular process;4.90612354261842e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;5.13384879968133e-07!GO:0006350;transcription;5.43120084710426e-07!GO:0043623;cellular protein complex assembly;8.09928742972757e-07!GO:0051246;regulation of protein metabolic process;8.86311724866946e-07!GO:0003724;RNA helicase activity;8.94205391125847e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;9.57379480502829e-07!GO:0006302;double-strand break repair;9.91222174455842e-07!GO:0005667;transcription factor complex;1.09942377351592e-06!GO:0005793;ER-Golgi intermediate compartment;1.11435386291435e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.13595266965599e-06!GO:0009109;coenzyme catabolic process;1.41821618733709e-06!GO:0048475;coated membrane;1.50186009431773e-06!GO:0030117;membrane coat;1.50186009431773e-06!GO:0016853;isomerase activity;1.54083609843023e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.68405068905037e-06!GO:0005762;mitochondrial large ribosomal subunit;1.76051879437133e-06!GO:0000315;organellar large ribosomal subunit;1.76051879437133e-06!GO:0005768;endosome;2.39425894547492e-06!GO:0032446;protein modification by small protein conjugation;2.44025391692663e-06!GO:0044452;nucleolar part;2.73479703334002e-06!GO:0000776;kinetochore;2.94932580878345e-06!GO:0016491;oxidoreductase activity;3.09243134709772e-06!GO:0003684;damaged DNA binding;3.68756170461604e-06!GO:0007051;spindle organization and biogenesis;3.70533917482803e-06!GO:0006352;transcription initiation;4.52701815366061e-06!GO:0000314;organellar small ribosomal subunit;4.59275269538015e-06!GO:0005763;mitochondrial small ribosomal subunit;4.59275269538015e-06!GO:0003682;chromatin binding;4.69835759804721e-06!GO:0007059;chromosome segregation;5.78899653921476e-06!GO:0016567;protein ubiquitination;6.29743043743912e-06!GO:0051187;cofactor catabolic process;6.30210336616313e-06!GO:0000151;ubiquitin ligase complex;6.43388880120418e-06!GO:0004527;exonuclease activity;6.43388880120418e-06!GO:0006839;mitochondrial transport;6.5915727424034e-06!GO:0003713;transcription coactivator activity;7.53401478450083e-06!GO:0003677;DNA binding;8.11437957165018e-06!GO:0019752;carboxylic acid metabolic process;8.57830912214146e-06!GO:0016310;phosphorylation;8.62038494590354e-06!GO:0030120;vesicle coat;8.85634197623123e-06!GO:0030662;coated vesicle membrane;8.85634197623123e-06!GO:0006082;organic acid metabolic process;9.60309300973559e-06!GO:0010468;regulation of gene expression;9.61338013767443e-06!GO:0008654;phospholipid biosynthetic process;1.02801479299307e-05!GO:0003678;DNA helicase activity;1.02854389373639e-05!GO:0006310;DNA recombination;1.04236519180054e-05!GO:0051052;regulation of DNA metabolic process;1.06169461983261e-05!GO:0051168;nuclear export;1.07339723690694e-05!GO:0006793;phosphorus metabolic process;1.37924999600329e-05!GO:0006796;phosphate metabolic process;1.37924999600329e-05!GO:0043021;ribonucleoprotein binding;1.62375687183192e-05!GO:0006091;generation of precursor metabolites and energy;1.68754563138847e-05!GO:0006613;cotranslational protein targeting to membrane;1.73404161085739e-05!GO:0006383;transcription from RNA polymerase III promoter;2.09918695438072e-05!GO:0016563;transcription activator activity;2.15263647435472e-05!GO:0004518;nuclease activity;2.38193211818351e-05!GO:0007088;regulation of mitosis;2.45146834875529e-05!GO:0032508;DNA duplex unwinding;2.55953645394254e-05!GO:0032392;DNA geometric change;2.55953645394254e-05!GO:0042981;regulation of apoptosis;2.61487178265391e-05!GO:0043067;regulation of programmed cell death;2.74868594339867e-05!GO:0016363;nuclear matrix;2.88676976902699e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.92688720301951e-05!GO:0006520;amino acid metabolic process;3.15773063742476e-05!GO:0006414;translational elongation;3.41487483301232e-05!GO:0007093;mitotic cell cycle checkpoint;3.41487483301232e-05!GO:0032774;RNA biosynthetic process;3.76801610514135e-05!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;3.84725759781953e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;3.87800668806875e-05!GO:0015399;primary active transmembrane transporter activity;3.87800668806875e-05!GO:0051427;hormone receptor binding;4.14622136370968e-05!GO:0005839;proteasome core complex (sensu Eukaryota);4.20743031801941e-05!GO:0044440;endosomal part;4.38215881210556e-05!GO:0010008;endosome membrane;4.38215881210556e-05!GO:0005798;Golgi-associated vesicle;4.59612273206188e-05!GO:0005788;endoplasmic reticulum lumen;4.69196025731664e-05!GO:0009165;nucleotide biosynthetic process;4.96490171553492e-05!GO:0006351;transcription, DNA-dependent;5.10848541217953e-05!GO:0003729;mRNA binding;5.1279963959923e-05!GO:0022890;inorganic cation transmembrane transporter activity;5.25536402389715e-05!GO:0006338;chromatin remodeling;5.32004916656462e-05!GO:0006401;RNA catabolic process;5.62516063778417e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;5.6280312934336e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;5.69621797075321e-05!GO:0030880;RNA polymerase complex;5.76178104382491e-05!GO:0000049;tRNA binding;5.79525429240573e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;5.93517985250009e-05!GO:0006626;protein targeting to mitochondrion;6.15575433308859e-05!GO:0006268;DNA unwinding during replication;6.44659934458238e-05!GO:0044431;Golgi apparatus part;7.15846319446051e-05!GO:0006270;DNA replication initiation;7.29843647588317e-05!GO:0008186;RNA-dependent ATPase activity;7.29843647588317e-05!GO:0016859;cis-trans isomerase activity;7.35244729555912e-05!GO:0035257;nuclear hormone receptor binding;8.72197351703384e-05!GO:0000079;regulation of cyclin-dependent protein kinase activity;8.89910520541242e-05!GO:0005753;mitochondrial proton-transporting ATP synthase complex;9.19052872418984e-05!GO:0043681;protein import into mitochondrion;9.22107136502466e-05!GO:0031072;heat shock protein binding;9.36788507620178e-05!GO:0006402;mRNA catabolic process;0.000104005026124818!GO:0003924;GTPase activity;0.000115446536081936!GO:0046483;heterocycle metabolic process;0.000126749899251319!GO:0004298;threonine endopeptidase activity;0.000151191071490581!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00015295488295368!GO:0000428;DNA-directed RNA polymerase complex;0.00015295488295368!GO:0005758;mitochondrial intermembrane space;0.000154384372462725!GO:0031988;membrane-bound vesicle;0.000169301616697439!GO:0000059;protein import into nucleus, docking;0.000171605788089745!GO:0005874;microtubule;0.000189110175936397!GO:0007052;mitotic spindle organization and biogenesis;0.000208714978977478!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000211188263004523!GO:0004004;ATP-dependent RNA helicase activity;0.000211909554121935!GO:0003714;transcription corepressor activity;0.000236113964499988!GO:0008610;lipid biosynthetic process;0.00024808516132592!GO:0015631;tubulin binding;0.000251968595510744!GO:0003690;double-stranded DNA binding;0.000268386604924199!GO:0007017;microtubule-based process;0.000272615597165664!GO:0031970;organelle envelope lumen;0.000281999579051253!GO:0019899;enzyme binding;0.000291220504799517!GO:0005770;late endosome;0.000305616711752558!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00032558402821539!GO:0015992;proton transport;0.000331564767605898!GO:0016564;transcription repressor activity;0.000356171731906591!GO:0006612;protein targeting to membrane;0.000357192175679752!GO:0016023;cytoplasmic membrane-bound vesicle;0.000364519892861609!GO:0046474;glycerophospholipid biosynthetic process;0.000372916882235165!GO:0005684;U2-dependent spliceosome;0.000387954478379097!GO:0046467;membrane lipid biosynthetic process;0.000394388143091494!GO:0006818;hydrogen transport;0.000401232666124334!GO:0006275;regulation of DNA replication;0.000401232666124334!GO:0050789;regulation of biological process;0.000422720069833207!GO:0043492;ATPase activity, coupled to movement of substances;0.000425656662800153!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000442559846161248!GO:0006405;RNA export from nucleus;0.000450450867504002!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000471755186164244!GO:0016251;general RNA polymerase II transcription factor activity;0.000489600140507599!GO:0031968;organelle outer membrane;0.000501680540409956!GO:0046489;phosphoinositide biosynthetic process;0.000518681225619571!GO:0005669;transcription factor TFIID complex;0.000523712091967539!GO:0006519;amino acid and derivative metabolic process;0.000549239821500624!GO:0009451;RNA modification;0.000562026015075867!GO:0000786;nucleosome;0.000568365406242349!GO:0051789;response to protein stimulus;0.000584430657095688!GO:0006986;response to unfolded protein;0.000584430657095688!GO:0000922;spindle pole;0.000586789232805308!GO:0019867;outer membrane;0.000598012561946395!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000598446866618966!GO:0051539;4 iron, 4 sulfur cluster binding;0.000609375225953832!GO:0007006;mitochondrial membrane organization and biogenesis;0.00063872007948068!GO:0005637;nuclear inner membrane;0.000643026937457667!GO:0045449;regulation of transcription;0.000658377483993933!GO:0032200;telomere organization and biogenesis;0.000682386409524244!GO:0000723;telomere maintenance;0.000682386409524244!GO:0000139;Golgi membrane;0.000694864789146169!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00073388594327199!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00073388594327199!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00073388594327199!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00073388594327199!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000755588363492788!GO:0008276;protein methyltransferase activity;0.000757555564196377!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000783659882793584!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000788030924219662!GO:0005741;mitochondrial outer membrane;0.000819596871009116!GO:0003711;transcription elongation regulator activity;0.000840436477606299!GO:0045454;cell redox homeostasis;0.000849343281516746!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.000911361853730541!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.000911361853730541!GO:0005048;signal sequence binding;0.000912736829725506!GO:0043069;negative regulation of programmed cell death;0.000940996180299127!GO:0051920;peroxiredoxin activity;0.000940996180299127!GO:0051540;metal cluster binding;0.000941762001329487!GO:0051536;iron-sulfur cluster binding;0.000941762001329487!GO:0031982;vesicle;0.000941762001329487!GO:0006144;purine base metabolic process;0.0009511150104796!GO:0006284;base-excision repair;0.00098149951149368!GO:0000819;sister chromatid segregation;0.00101622954334956!GO:0043284;biopolymer biosynthetic process;0.00102383664331949!GO:0008250;oligosaccharyl transferase complex;0.00102668169427335!GO:0000096;sulfur amino acid metabolic process;0.0010274270913877!GO:0030867;rough endoplasmic reticulum membrane;0.00107477533601151!GO:0050662;coenzyme binding;0.00108246585887032!GO:0042393;histone binding;0.00108246585887032!GO:0006007;glucose catabolic process;0.00115916763609831!GO:0031324;negative regulation of cellular metabolic process;0.0012271800921172!GO:0051252;regulation of RNA metabolic process;0.00122772473754466!GO:0043066;negative regulation of apoptosis;0.00124042807643738!GO:0015980;energy derivation by oxidation of organic compounds;0.00128861594873007!GO:0005885;Arp2/3 protein complex;0.00128861594873007!GO:0043596;nuclear replication fork;0.00132074990145364!GO:0005525;GTP binding;0.00139416351248726!GO:0006891;intra-Golgi vesicle-mediated transport;0.00147530736362647!GO:0006916;anti-apoptosis;0.00151276443341673!GO:0016272;prefoldin complex;0.00155285225431899!GO:0009892;negative regulation of metabolic process;0.00156904405369265!GO:0006611;protein export from nucleus;0.00158686630331203!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00158921896797967!GO:0000070;mitotic sister chromatid segregation;0.00160472304483881!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00162739916597437!GO:0048500;signal recognition particle;0.00163855347731432!GO:0004576;oligosaccharyl transferase activity;0.0016504750568237!GO:0031570;DNA integrity checkpoint;0.00165307819120086!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00165327216039225!GO:0005769;early endosome;0.00170479923724013!GO:0051087;chaperone binding;0.00175802752967767!GO:0000725;recombinational repair;0.00179503804008364!GO:0000724;double-strand break repair via homologous recombination;0.00179503804008364!GO:0005791;rough endoplasmic reticulum;0.00183731616039277!GO:0004003;ATP-dependent DNA helicase activity;0.00187478162463786!GO:0006950;response to stress;0.00192447726294591!GO:0030384;phosphoinositide metabolic process;0.00214178135731305!GO:0031410;cytoplasmic vesicle;0.00220930381576346!GO:0019843;rRNA binding;0.00246348911807578!GO:0008408;3'-5' exonuclease activity;0.00249760019503337!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00249999224208654!GO:0008312;7S RNA binding;0.00255826318166087!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00258795276126209!GO:0008017;microtubule binding;0.00264500113984269!GO:0006779;porphyrin biosynthetic process;0.00270640962027397!GO:0033014;tetrapyrrole biosynthetic process;0.00270640962027397!GO:0031124;mRNA 3'-end processing;0.00277295793869072!GO:0048471;perinuclear region of cytoplasm;0.00283670810786046!GO:0005876;spindle microtubule;0.00284157528567467!GO:0048037;cofactor binding;0.00294942305732503!GO:0016126;sterol biosynthetic process;0.0030033576603169!GO:0000178;exosome (RNase complex);0.00311105349432974!GO:0009112;nucleobase metabolic process;0.00313086139591514!GO:0006417;regulation of translation;0.00335982291784638!GO:0000781;chromosome, telomeric region;0.00344955312677872!GO:0047485;protein N-terminus binding;0.00347374810225443!GO:0008652;amino acid biosynthetic process;0.00359462132898385!GO:0009124;nucleoside monophosphate biosynthetic process;0.00378632715937591!GO:0009123;nucleoside monophosphate metabolic process;0.00378632715937591!GO:0043601;nuclear replisome;0.00392364942176975!GO:0030894;replisome;0.00392364942176975!GO:0006289;nucleotide-excision repair;0.00399320478409194!GO:0006355;regulation of transcription, DNA-dependent;0.00402448648662048!GO:0006595;polyamine metabolic process;0.00413858466884374!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00435408984820011!GO:0045047;protein targeting to ER;0.00435408984820011!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00444632728609841!GO:0018196;peptidyl-asparagine modification;0.00460786781439749!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00460786781439749!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00462108200832408!GO:0015002;heme-copper terminal oxidase activity;0.00462108200832408!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00462108200832408!GO:0004129;cytochrome-c oxidase activity;0.00462108200832408!GO:0043624;cellular protein complex disassembly;0.00463263677864657!GO:0030133;transport vesicle;0.00468000299170319!GO:0006650;glycerophospholipid metabolic process;0.00478402288650064!GO:0000228;nuclear chromosome;0.0049559513326954!GO:0030118;clathrin coat;0.005006451690415!GO:0008287;protein serine/threonine phosphatase complex;0.00505811851249445!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00507342091992868!GO:0032259;methylation;0.00508729637063366!GO:0016584;nucleosome positioning;0.00518984643449559!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00521126018695869!GO:0030658;transport vesicle membrane;0.00528162118771518!GO:0022411;cellular component disassembly;0.00531678131313228!GO:0051053;negative regulation of DNA metabolic process;0.00538941473037148!GO:0030663;COPI coated vesicle membrane;0.00541560156045826!GO:0030126;COPI vesicle coat;0.00541560156045826!GO:0000082;G1/S transition of mitotic cell cycle;0.0056604223589565!GO:0035258;steroid hormone receptor binding;0.00567605342005403!GO:0006783;heme biosynthetic process;0.00570954628420772!GO:0045045;secretory pathway;0.00570968066522744!GO:0030134;ER to Golgi transport vesicle;0.00577081134519402!GO:0016407;acetyltransferase activity;0.00591098711165527!GO:0004532;exoribonuclease activity;0.00598081645587105!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00598081645587105!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00603525024031095!GO:0006400;tRNA modification;0.00605724739962413!GO:0046966;thyroid hormone receptor binding;0.00618751720907624!GO:0000287;magnesium ion binding;0.00618751720907624!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00618751720907624!GO:0007004;telomere maintenance via telomerase;0.00618751720907624!GO:0004674;protein serine/threonine kinase activity;0.0063492037123987!GO:0006778;porphyrin metabolic process;0.00651016514213208!GO:0033013;tetrapyrrole metabolic process;0.00651016514213208!GO:0043022;ribosome binding;0.00657006049815275!GO:0006506;GPI anchor biosynthetic process;0.00673777252411008!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00675479964284501!GO:0003746;translation elongation factor activity;0.00691649745753588!GO:0006096;glycolysis;0.00695121088122502!GO:0031123;RNA 3'-end processing;0.00699343657423096!GO:0000339;RNA cap binding;0.00699473841682596!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00721645438225273!GO:0000152;nuclear ubiquitin ligase complex;0.00729083106925333!GO:0008022;protein C-terminus binding;0.00731389703593357!GO:0009308;amine metabolic process;0.00745628512301773!GO:0045786;negative regulation of progression through cell cycle;0.00749186429301274!GO:0043488;regulation of mRNA stability;0.00749186429301274!GO:0043487;regulation of RNA stability;0.00749186429301274!GO:0003887;DNA-directed DNA polymerase activity;0.00756232188259613!GO:0048487;beta-tubulin binding;0.00756232188259613!GO:0005832;chaperonin-containing T-complex;0.00760058993086271!GO:0006607;NLS-bearing substrate import into nucleus;0.00765851730688127!GO:0000077;DNA damage checkpoint;0.00779645582660131!GO:0000097;sulfur amino acid biosynthetic process;0.00805297379617773!GO:0022406;membrane docking;0.00818306500990509!GO:0048278;vesicle docking;0.00818306500990509!GO:0006376;mRNA splice site selection;0.00826200549676719!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00826200549676719!GO:0032984;macromolecular complex disassembly;0.00841610956078345!GO:0006378;mRNA polyadenylation;0.00841610956078345!GO:0030660;Golgi-associated vesicle membrane;0.00841610956078345!GO:0030127;COPII vesicle coat;0.00852768296287728!GO:0012507;ER to Golgi transport vesicle membrane;0.00852768296287728!GO:0009161;ribonucleoside monophosphate metabolic process;0.00855764768613008!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.00855764768613008!GO:0006695;cholesterol biosynthetic process;0.0086997811675311!GO:0006730;one-carbon compound metabolic process;0.00885195435572292!GO:0000080;G1 phase of mitotic cell cycle;0.00894713672891483!GO:0046365;monosaccharide catabolic process;0.00897856431908549!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00930134500004193!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00939301514804677!GO:0042054;histone methyltransferase activity;0.00944919340803177!GO:0000726;non-recombinational repair;0.010121330303876!GO:0006118;electron transport;0.010218882094137!GO:0043189;H4/H2A histone acetyltransferase complex;0.0104252341557597!GO:0006505;GPI anchor metabolic process;0.0108151171793293!GO:0008139;nuclear localization sequence binding;0.0108174010906946!GO:0035267;NuA4 histone acetyltransferase complex;0.0109736533478166!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0110767768255748!GO:0032561;guanyl ribonucleotide binding;0.0110767768255748!GO:0019001;guanyl nucleotide binding;0.0110767768255748!GO:0031577;spindle checkpoint;0.0110767768255748!GO:0030137;COPI-coated vesicle;0.0113074627879029!GO:0006278;RNA-dependent DNA replication;0.0117212576319294!GO:0048523;negative regulation of cellular process;0.0118292238274782!GO:0019783;small conjugating protein-specific protease activity;0.0120969943133164!GO:0005663;DNA replication factor C complex;0.01213456541951!GO:0043414;biopolymer methylation;0.012143360618604!GO:0006807;nitrogen compound metabolic process;0.012143360618604!GO:0008632;apoptotic program;0.0122186371718344!GO:0043241;protein complex disassembly;0.0122186371718344!GO:0006904;vesicle docking during exocytosis;0.0124258038068906!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0129999969065165!GO:0009303;rRNA transcription;0.0130076113001327!GO:0004523;ribonuclease H activity;0.0130962474980367!GO:0009116;nucleoside metabolic process;0.0133642402083103!GO:0006541;glutamine metabolic process;0.0135972829707946!GO:0015036;disulfide oxidoreductase activity;0.0136033982772311!GO:0005680;anaphase-promoting complex;0.0140216394910811!GO:0030119;AP-type membrane coat adaptor complex;0.0140251983842665!GO:0008170;N-methyltransferase activity;0.0140251983842665!GO:0008180;signalosome;0.0140498070101483!GO:0008234;cysteine-type peptidase activity;0.0140498070101483!GO:0009067;aspartate family amino acid biosynthetic process;0.0141092300977707!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.014293104414191!GO:0000086;G2/M transition of mitotic cell cycle;0.0143213105606073!GO:0042168;heme metabolic process;0.0144002649142491!GO:0019320;hexose catabolic process;0.0145057873872165!GO:0046164;alcohol catabolic process;0.0146002828053423!GO:0030176;integral to endoplasmic reticulum membrane;0.0148283907686741!GO:0009081;branched chain family amino acid metabolic process;0.0149798416661939!GO:0007021;tubulin folding;0.0149837120689063!GO:0007010;cytoskeleton organization and biogenesis;0.0149837120689063!GO:0030521;androgen receptor signaling pathway;0.0154829859660015!GO:0051287;NAD binding;0.0154829859660015!GO:0030262;apoptotic nuclear changes;0.0154829859660015!GO:0030518;steroid hormone receptor signaling pathway;0.0156406789145092!GO:0006406;mRNA export from nucleus;0.0156657637365643!GO:0004843;ubiquitin-specific protease activity;0.0158032562731835!GO:0009066;aspartate family amino acid metabolic process;0.0158032562731835!GO:0044262;cellular carbohydrate metabolic process;0.0161820633205795!GO:0006733;oxidoreduction coenzyme metabolic process;0.0161820633205795!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0167320813913681!GO:0031901;early endosome membrane;0.0171789056063424!GO:0001522;pseudouridine synthesis;0.0171871716366217!GO:0044450;microtubule organizing center part;0.0176451534822079!GO:0033116;ER-Golgi intermediate compartment membrane;0.0176451534822079!GO:0016481;negative regulation of transcription;0.0178130962325402!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0181061070213945!GO:0006360;transcription from RNA polymerase I promoter;0.0182959484276259!GO:0000910;cytokinesis;0.0185098836533067!GO:0040029;regulation of gene expression, epigenetic;0.0192964309792828!GO:0030131;clathrin adaptor complex;0.0198720033163059!GO:0005652;nuclear lamina;0.0198785038070828!GO:0008156;negative regulation of DNA replication;0.0201219102773814!GO:0030496;midbody;0.0201298088987833!GO:0006643;membrane lipid metabolic process;0.0201469701444661!GO:0030145;manganese ion binding;0.0203849427484366!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.0204061846481631!GO:0031326;regulation of cellular biosynthetic process;0.0206918652997734!GO:0000123;histone acetyltransferase complex;0.0216208086961976!GO:0006497;protein amino acid lipidation;0.0216208086961976!GO:0046914;transition metal ion binding;0.0216208086961976!GO:0030508;thiol-disulfide exchange intermediate activity;0.0217852151292378!GO:0000209;protein polyubiquitination;0.0220929781823241!GO:0051297;centrosome organization and biogenesis;0.0221701989138423!GO:0031023;microtubule organizing center organization and biogenesis;0.0221701989138423!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.0221701989138423!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0222468469862167!GO:0045039;protein import into mitochondrial inner membrane;0.0222468469862167!GO:0006301;postreplication repair;0.0222884902845694!GO:0030132;clathrin coat of coated pit;0.0224656982013703!GO:0005773;vacuole;0.0233964321906807!GO:0000793;condensed chromosome;0.0235795704468501!GO:0046128;purine ribonucleoside metabolic process;0.023786391529354!GO:0042278;purine nucleoside metabolic process;0.023786391529354!GO:0006740;NADPH regeneration;0.0238181173902323!GO:0006098;pentose-phosphate shunt;0.0238181173902323!GO:0009113;purine base biosynthetic process;0.0238181173902323!GO:0006220;pyrimidine nucleotide metabolic process;0.0242419356373568!GO:0000930;gamma-tubulin complex;0.0244087900349313!GO:0000118;histone deacetylase complex;0.0244419001004925!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0244419001004925!GO:0010257;NADH dehydrogenase complex assembly;0.0244419001004925!GO:0033108;mitochondrial respiratory chain complex assembly;0.0244419001004925!GO:0000175;3'-5'-exoribonuclease activity;0.0244419001004925!GO:0007346;regulation of progression through mitotic cell cycle;0.0244419001004925!GO:0008299;isoprenoid biosynthetic process;0.0245088554003498!GO:0006308;DNA catabolic process;0.0245088554003498!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0246318063253906!GO:0008536;Ran GTPase binding;0.0246983042315837!GO:0008144;drug binding;0.0248398541517968!GO:0044454;nuclear chromosome part;0.0252281852664644!GO:0031371;ubiquitin conjugating enzyme complex;0.0253577091693313!GO:0016279;protein-lysine N-methyltransferase activity;0.0253577091693313!GO:0018024;histone-lysine N-methyltransferase activity;0.0253577091693313!GO:0016278;lysine N-methyltransferase activity;0.0253577091693313!GO:0051318;G1 phase;0.0254284379692058!GO:0016790;thiolester hydrolase activity;0.0254718849732421!GO:0031252;leading edge;0.0255795059978881!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0264755833066082!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0264755833066082!GO:0009126;purine nucleoside monophosphate metabolic process;0.0264755833066082!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0264755833066082!GO:0019318;hexose metabolic process;0.026540023474468!GO:0030218;erythrocyte differentiation;0.0273104525033978!GO:0016835;carbon-oxygen lyase activity;0.0277755400423815!GO:0004221;ubiquitin thiolesterase activity;0.0278854194041216!GO:0017056;structural constituent of nuclear pore;0.0282972570734151!GO:0042802;identical protein binding;0.0287667865673014!GO:0016585;chromatin remodeling complex;0.0287973507133953!GO:0044438;microbody part;0.0298141971438955!GO:0044439;peroxisomal part;0.0298141971438955!GO:0042770;DNA damage response, signal transduction;0.0300163826176415!GO:0000305;response to oxygen radical;0.0301281115756955!GO:0005996;monosaccharide metabolic process;0.0301281115756955!GO:0051656;establishment of organelle localization;0.030206702835412!GO:0005744;mitochondrial inner membrane presequence translocase complex;0.0303306061005378!GO:0016408;C-acyltransferase activity;0.0303887786143247!GO:0042026;protein refolding;0.0305245757428906!GO:0032039;integrator complex;0.0306380013770253!GO:0043631;RNA polyadenylation;0.0308823927021846!GO:0003702;RNA polymerase II transcription factor activity;0.0317742826103117!GO:0006672;ceramide metabolic process;0.031835361980568!GO:0004520;endodeoxyribonuclease activity;0.0321352413854753!GO:0042158;lipoprotein biosynthetic process;0.0321568894772086!GO:0007094;mitotic cell cycle spindle assembly checkpoint;0.0321568894772086!GO:0016453;C-acetyltransferase activity;0.0326730208030554!GO:0046112;nucleobase biosynthetic process;0.0328732848782267!GO:0031902;late endosome membrane;0.0333026406117069!GO:0065007;biological regulation;0.0345105867120142!GO:0065009;regulation of a molecular function;0.0347310923514078!GO:0003725;double-stranded RNA binding;0.0348589845980073!GO:0004448;isocitrate dehydrogenase activity;0.035005799603139!GO:0005851;eukaryotic translation initiation factor 2B complex;0.0357160784560617!GO:0006610;ribosomal protein import into nucleus;0.0358392945672927!GO:0008320;protein transmembrane transporter activity;0.036734941114742!GO:0031057;negative regulation of histone modification;0.0368895333601216!GO:0035067;negative regulation of histone acetylation;0.0368895333601216!GO:0012506;vesicle membrane;0.0371026719730508!GO:0006415;translational termination;0.0375239260022178!GO:0005784;translocon complex;0.0378025897972049!GO:0004540;ribonuclease activity;0.0384338545376562!GO:0033170;DNA-protein loading ATPase activity;0.0384516722327519!GO:0003689;DNA clamp loader activity;0.0384516722327519!GO:0030911;TPR domain binding;0.038635206188652!GO:0031625;ubiquitin protein ligase binding;0.0389026566102536!GO:0003985;acetyl-CoA C-acetyltransferase activity;0.0390060510079603!GO:0005666;DNA-directed RNA polymerase III complex;0.0395194738783828!GO:0030174;regulation of DNA replication initiation;0.0401288636587646!GO:0008097;5S rRNA binding;0.0401766837833396!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0403192628496247!GO:0004536;deoxyribonuclease activity;0.0404105997447636!GO:0046519;sphingoid metabolic process;0.040926828843156!GO:0042809;vitamin D receptor binding;0.0412075622544127!GO:0007050;cell cycle arrest;0.0413022686954418!GO:0031903;microbody membrane;0.0417134977841238!GO:0005778;peroxisomal membrane;0.0417134977841238!GO:0008601;protein phosphatase type 2A regulator activity;0.0418261904683317!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0418659000276001!GO:0006644;phospholipid metabolic process;0.0423590544970938!GO:0030433;ER-associated protein catabolic process;0.0424472237162612!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0424472237162612!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0429510607179485!GO:0005732;small nucleolar ribonucleoprotein complex;0.0436208457459271!GO:0030659;cytoplasmic vesicle membrane;0.0437309608622691!GO:0016018;cyclosporin A binding;0.0438077423963696!GO:0032940;secretion by cell;0.0438149140614617!GO:0004239;methionyl aminopeptidase activity;0.0439863365146599!GO:0009083;branched chain family amino acid catabolic process;0.0442043510683169!GO:0032287;myelin maintenance in the peripheral nervous system;0.0444601204058218!GO:0032838;cell projection cytoplasm;0.0444601204058218!GO:0033081;regulation of T cell differentiation in the thymus;0.0444601204058218!GO:0043217;myelin maintenance;0.0444601204058218!GO:0060087;relaxation of vascular smooth muscle;0.0444601204058218!GO:0032839;dendrite cytoplasm;0.0444601204058218!GO:0031647;regulation of protein stability;0.0446099556597381!GO:0019206;nucleoside kinase activity;0.0447561267862766!GO:0004722;protein serine/threonine phosphatase activity;0.0447561267862766!GO:0006555;methionine metabolic process;0.0449752869059008!GO:0050000;chromosome localization;0.0449752869059008!GO:0051303;establishment of chromosome localization;0.0449752869059008!GO:0003756;protein disulfide isomerase activity;0.0449752869059008!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0449752869059008!GO:0022884;macromolecule transmembrane transporter activity;0.0451691069271352!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0451691069271352!GO:0005754;mitochondrial proton-transporting ATP synthase, catalytic core;0.0457328008178329!GO:0000275;mitochondrial proton-transporting ATP synthase complex, catalytic core F(1);0.0457328008178329!GO:0045267;proton-transporting ATP synthase, catalytic core;0.0457328008178329!GO:0044255;cellular lipid metabolic process;0.0457509984183325!GO:0016197;endosome transport;0.0462611717996085!GO:0006596;polyamine biosynthetic process;0.047025507858351!GO:0000323;lytic vacuole;0.047025507858351!GO:0005764;lysosome;0.047025507858351!GO:0005777;peroxisome;0.0474544695977855!GO:0042579;microbody;0.0474544695977855!GO:0005938;cell cortex;0.0476591745755941!GO:0004815;aspartate-tRNA ligase activity;0.0481702141651545!GO:0006422;aspartyl-tRNA aminoacylation;0.0481702141651545!GO:0007098;centrosome cycle;0.0486388155498031!GO:0032040;small subunit processome;0.0486675832363466!GO:0045815;positive regulation of gene expression, epigenetic;0.048760855237887!GO:0008538;proteasome activator activity;0.0490579578927328!GO:0009396;folic acid and derivative biosynthetic process;0.0490579578927328!GO:0000303;response to superoxide;0.049924078308329 | |||
|sample_id=10824 | |sample_id=10824 | ||
|sample_note= | |sample_note= | ||
|sample_sex=female | |sample_sex=female | ||
|sample_species= | |sample_species=Human (Homo sapiens) | ||
|sample_strain= | |sample_strain= | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=GATA6:3.53652371598;MYB:1.91453892144;POU3F1..4:1.74755117282;ELK1,4_GABP{A,B1}:1.72376020444;CDX1,2,4:1.61974095594;NFY{A,B,C}:1.56042023151;E2F1..5:1.4613624517;STAT5{A,B}:1.44117801259;PBX1:1.4091373062;NRF1:1.25442316536;ZBTB16:1.18957979687;HOXA9_MEIS1:1.15130310269;POU2F1..3:1.14372193455;NR5A1,2:1.0262560085;STAT1,3:1.00035840005;ZNF143:0.918492872862;NR6A1:0.915796800515;HOX{A5,B5}:0.901471019923;FOXQ1:0.874705666783;HOX{A6,A7,B6,B7}:0.855276492784;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.846138406838;NFIX:0.836956871802;CRX:0.816736798038;PITX1..3:0.805969084698;PAX8:0.788546778225;ADNP_IRX_SIX_ZHX:0.786311170949;AHR_ARNT_ARNT2:0.716351500623;OCT4_SOX2{dimer}:0.707103880869;NANOG:0.669331052;YY1:0.617680934879;RBPJ:0.579791663222;ESRRA:0.541530273508;BREu{core}:0.497944589027;T:0.485893145073;NKX3-2:0.456607763512;CUX2:0.443546067981;HES1:0.414793747667;ZNF148:0.41384592722;FOXA2:0.41160909819;NFE2:0.388525085442;NR1H4:0.385966247776;SOX{8,9,10}:0.384563857161;AIRE:0.372728766528;NANOG{mouse}:0.367608422409;RORA:0.362137261442;NKX2-3_NKX2-5:0.351385642758;SPZ1:0.344179341813;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.340118193078;GFI1:0.322626901166;AR:0.307809098904;PAX3,7:0.296561083044;PRRX1,2:0.293723737318;ALX1:0.2642898499;ELF1,2,4:0.2497139854;IKZF2:0.213600292967;SMAD1..7,9:0.179046378986;NKX2-1,4:0.167779797709;HAND1,2:0.165403829907;ONECUT1,2:0.152498540007;POU1F1:0.140013642674;IKZF1:0.134282705257;HSF1,2:0.132213264071;SNAI1..3:0.129680400804;ARID5B:0.118578008891;TEF:0.109692424927;EVI1:0.0869621937093;HOX{A4,D4}:0.0816463196069;HNF4A_NR2F1,2:0.0802512869104;TOPORS:0.0770596300312;LEF1_TCF7_TCF7L1,2:0.0732310493206;RXRA_VDR{dimer}:0.0705047382963;ZEB1:0.0132699284635;PAX6:0.0113276529421;bHLH_family:-0.0034353740966;PPARG:-0.0215664296553;ZNF384:-0.03978882248;VSX1,2:-0.0614903122551;NKX6-1,2:-0.0660615309187;FOX{F1,F2,J1}:-0.0769345728588;SPIB:-0.105306256265;FOXD3:-0.106544723405;EN1,2:-0.117498650651;POU6F1:-0.133630576047;POU5F1:-0.136271548282;TFDP1:-0.174612591934;MYOD1:-0.176784669786;CREB1:-0.190344383996;ATF5_CREB3:-0.193153360559;HIF1A:-0.198030564407;NFE2L2:-0.201054212393;FOSL2:-0.202713192239;HLF:-0.219334957506;HNF1A:-0.220464085939;NKX2-2,8:-0.245034315149;FOXP1:-0.245318219548;MEF2{A,B,C,D}:-0.255315644372;ATF4:-0.264841872441;PAX1,9:-0.274641912115;SPI1:-0.279628156928;PAX2:-0.314186554547;MAFB:-0.339616255434;RUNX1..3:-0.367677767482;SP1:-0.367976939418;CEBPA,B_DDIT3:-0.386004883892;BACH2:-0.387821993281;FOXN1:-0.392424869475;KLF4:-0.400445578736;NKX3-1:-0.405535948008;UFEwm:-0.405720379578;NFKB1_REL_RELA:-0.425646127706;RFX2..5_RFXANK_RFXAP:-0.42691972242;FOS_FOS{B,L1}_JUN{B,D}:-0.427966165565;TGIF1:-0.461661223574;ZFP161:-0.46625398179;LMO2:-0.472660428975;STAT2,4,6:-0.472968873674;RXR{A,B,G}:-0.477064623425;ETS1,2:-0.497119908965;RFX1:-0.497304497589;GATA4:-0.499727008144;PAX4:-0.5254973553;HBP1_HMGB_SSRP1_UBTF:-0.52907634838;SOX17:-0.55306495804;SOX5:-0.599823165534;REST:-0.606422246064;NFE2L1:-0.615308814858;ZBTB6:-0.637096372405;FOXP3:-0.644579721886;PDX1:-0.685507459405;ZNF238:-0.693993412417;DMAP1_NCOR{1,2}_SMARC:-0.705450540549;NFATC1..3:-0.705505651969;XBP1:-0.708478957196;FOXM1:-0.710244465432;ZIC1..3:-0.724887335483;FOX{I1,J2}:-0.731193697884;ATF2:-0.764470000169;LHX3,4:-0.766375113058;EP300:-0.767645521879;GTF2I:-0.774457308604;ALX4:-0.780244335511;TLX2:-0.782544378655;PATZ1:-0.78361439432;TP53:-0.784820861467;XCPE1{core}:-0.793935450872;RREB1:-0.806558187381;NFIL3:-0.816496928995;IRF7:-0.8201098061;SOX2:-0.820353220335;NHLH1,2:-0.838919133768;TBP:-0.876676666274;DBP:-0.888691669816;EGR1..3:-0.892953561855;SREBF1,2:-0.89426419778;CDC5L:-0.908700143685;GTF2A1,2:-0.931508775393;MZF1:-0.936737286754;JUN:-0.948468380312;TFAP4:-0.951965080433;MED-1{core}:-0.976922786441;TEAD1:-0.993901662705;MYBL2:-1.01467153037;NR3C1:-1.01840907584;FOX{D1,D2}:-1.06897499777;IRF1,2:-1.07555106019;GCM1,2:-1.09826223529;HMGA1,2:-1.11407798163;BPTF:-1.12292427363;SRF:-1.12435475988;MYFfamily:-1.14102252043;ESR1:-1.16566651518;HMX1:-1.19475239375;EBF1:-1.21679555089;ZNF423:-1.23323316816;HIC1:-1.26138132456;TLX1..3_NFIC{dimer}:-1.27587505892;ATF6:-1.30420371393;GLI1..3:-1.30458862737;MAZ:-1.31920053115;FOXO1,3,4:-1.34189782984;PRDM1:-1.34996943757;PAX5:-1.36593577834;TAL1_TCF{3,4,12}:-1.36821160858;MTF1:-1.39898631688;TBX4,5:-1.47215758332;MTE{core}:-1.48960064267;GFI1B:-1.53835839663;GZF1:-1.55389893194;TFAP2{A,C}:-1.64978376585;TFAP2B:-1.73834296513;FOXL1:-1.94267775347;TFCP2:-2.30759003768 | |top_motifs=GATA6:3.53652371598;MYB:1.91453892144;POU3F1..4:1.74755117282;ELK1,4_GABP{A,B1}:1.72376020444;CDX1,2,4:1.61974095594;NFY{A,B,C}:1.56042023151;E2F1..5:1.4613624517;STAT5{A,B}:1.44117801259;PBX1:1.4091373062;NRF1:1.25442316536;ZBTB16:1.18957979687;HOXA9_MEIS1:1.15130310269;POU2F1..3:1.14372193455;NR5A1,2:1.0262560085;STAT1,3:1.00035840005;ZNF143:0.918492872862;NR6A1:0.915796800515;HOX{A5,B5}:0.901471019923;FOXQ1:0.874705666783;HOX{A6,A7,B6,B7}:0.855276492784;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.846138406838;NFIX:0.836956871802;CRX:0.816736798038;PITX1..3:0.805969084698;PAX8:0.788546778225;ADNP_IRX_SIX_ZHX:0.786311170949;AHR_ARNT_ARNT2:0.716351500623;OCT4_SOX2{dimer}:0.707103880869;NANOG:0.669331052;YY1:0.617680934879;RBPJ:0.579791663222;ESRRA:0.541530273508;BREu{core}:0.497944589027;T:0.485893145073;NKX3-2:0.456607763512;CUX2:0.443546067981;HES1:0.414793747667;ZNF148:0.41384592722;FOXA2:0.41160909819;NFE2:0.388525085442;NR1H4:0.385966247776;SOX{8,9,10}:0.384563857161;AIRE:0.372728766528;NANOG{mouse}:0.367608422409;RORA:0.362137261442;NKX2-3_NKX2-5:0.351385642758;SPZ1:0.344179341813;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.340118193078;GFI1:0.322626901166;AR:0.307809098904;PAX3,7:0.296561083044;PRRX1,2:0.293723737318;ALX1:0.2642898499;ELF1,2,4:0.2497139854;IKZF2:0.213600292967;SMAD1..7,9:0.179046378986;NKX2-1,4:0.167779797709;HAND1,2:0.165403829907;ONECUT1,2:0.152498540007;POU1F1:0.140013642674;IKZF1:0.134282705257;HSF1,2:0.132213264071;SNAI1..3:0.129680400804;ARID5B:0.118578008891;TEF:0.109692424927;EVI1:0.0869621937093;HOX{A4,D4}:0.0816463196069;HNF4A_NR2F1,2:0.0802512869104;TOPORS:0.0770596300312;LEF1_TCF7_TCF7L1,2:0.0732310493206;RXRA_VDR{dimer}:0.0705047382963;ZEB1:0.0132699284635;PAX6:0.0113276529421;bHLH_family:-0.0034353740966;PPARG:-0.0215664296553;ZNF384:-0.03978882248;VSX1,2:-0.0614903122551;NKX6-1,2:-0.0660615309187;FOX{F1,F2,J1}:-0.0769345728588;SPIB:-0.105306256265;FOXD3:-0.106544723405;EN1,2:-0.117498650651;POU6F1:-0.133630576047;POU5F1:-0.136271548282;TFDP1:-0.174612591934;MYOD1:-0.176784669786;CREB1:-0.190344383996;ATF5_CREB3:-0.193153360559;HIF1A:-0.198030564407;NFE2L2:-0.201054212393;FOSL2:-0.202713192239;HLF:-0.219334957506;HNF1A:-0.220464085939;NKX2-2,8:-0.245034315149;FOXP1:-0.245318219548;MEF2{A,B,C,D}:-0.255315644372;ATF4:-0.264841872441;PAX1,9:-0.274641912115;SPI1:-0.279628156928;PAX2:-0.314186554547;MAFB:-0.339616255434;RUNX1..3:-0.367677767482;SP1:-0.367976939418;CEBPA,B_DDIT3:-0.386004883892;BACH2:-0.387821993281;FOXN1:-0.392424869475;KLF4:-0.400445578736;NKX3-1:-0.405535948008;UFEwm:-0.405720379578;NFKB1_REL_RELA:-0.425646127706;RFX2..5_RFXANK_RFXAP:-0.42691972242;FOS_FOS{B,L1}_JUN{B,D}:-0.427966165565;TGIF1:-0.461661223574;ZFP161:-0.46625398179;LMO2:-0.472660428975;STAT2,4,6:-0.472968873674;RXR{A,B,G}:-0.477064623425;ETS1,2:-0.497119908965;RFX1:-0.497304497589;GATA4:-0.499727008144;PAX4:-0.5254973553;HBP1_HMGB_SSRP1_UBTF:-0.52907634838;SOX17:-0.55306495804;SOX5:-0.599823165534;REST:-0.606422246064;NFE2L1:-0.615308814858;ZBTB6:-0.637096372405;FOXP3:-0.644579721886;PDX1:-0.685507459405;ZNF238:-0.693993412417;DMAP1_NCOR{1,2}_SMARC:-0.705450540549;NFATC1..3:-0.705505651969;XBP1:-0.708478957196;FOXM1:-0.710244465432;ZIC1..3:-0.724887335483;FOX{I1,J2}:-0.731193697884;ATF2:-0.764470000169;LHX3,4:-0.766375113058;EP300:-0.767645521879;GTF2I:-0.774457308604;ALX4:-0.780244335511;TLX2:-0.782544378655;PATZ1:-0.78361439432;TP53:-0.784820861467;XCPE1{core}:-0.793935450872;RREB1:-0.806558187381;NFIL3:-0.816496928995;IRF7:-0.8201098061;SOX2:-0.820353220335;NHLH1,2:-0.838919133768;TBP:-0.876676666274;DBP:-0.888691669816;EGR1..3:-0.892953561855;SREBF1,2:-0.89426419778;CDC5L:-0.908700143685;GTF2A1,2:-0.931508775393;MZF1:-0.936737286754;JUN:-0.948468380312;TFAP4:-0.951965080433;MED-1{core}:-0.976922786441;TEAD1:-0.993901662705;MYBL2:-1.01467153037;NR3C1:-1.01840907584;FOX{D1,D2}:-1.06897499777;IRF1,2:-1.07555106019;GCM1,2:-1.09826223529;HMGA1,2:-1.11407798163;BPTF:-1.12292427363;SRF:-1.12435475988;MYFfamily:-1.14102252043;ESR1:-1.16566651518;HMX1:-1.19475239375;EBF1:-1.21679555089;ZNF423:-1.23323316816;HIC1:-1.26138132456;TLX1..3_NFIC{dimer}:-1.27587505892;ATF6:-1.30420371393;GLI1..3:-1.30458862737;MAZ:-1.31920053115;FOXO1,3,4:-1.34189782984;PRDM1:-1.34996943757;PAX5:-1.36593577834;TAL1_TCF{3,4,12}:-1.36821160858;MTF1:-1.39898631688;TBX4,5:-1.47215758332;MTE{core}:-1.48960064267;GFI1B:-1.53835839663;GZF1:-1.55389893194;TFAP2{A,C}:-1.64978376585;TFAP2B:-1.73834296513;FOXL1:-1.94267775347;TFCP2:-2.30759003768 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10824-111C5;search_select_hide=table117:FF:10824-111C5 | |||
}} | }} |
Latest revision as of 15:07, 3 June 2020
Name: | chronic myelogenous leukemia cell line:K562 ENCODE, biol_rep1 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs12334 |
Sample type: | cell lines |
Genomic View: | UCSC |
RefEX: | Specific genes |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12334
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12334
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.0132 |
10 | 10 | 0.0637 |
100 | 100 | 0.271 |
101 | 101 | 0.403 |
102 | 102 | 0.368 |
103 | 103 | 0.897 |
104 | 104 | 0.692 |
105 | 105 | 0.915 |
106 | 106 | 0.0432 |
107 | 107 | 0.0318 |
108 | 108 | 0.981 |
109 | 109 | 0.0174 |
11 | 11 | 0.114 |
110 | 110 | 0.168 |
111 | 111 | 0.435 |
112 | 112 | 0.788 |
113 | 113 | 0.129 |
114 | 114 | 0.0488 |
115 | 115 | 0.405 |
116 | 116 | 0.38 |
117 | 117 | 0.013 |
118 | 118 | 0.206 |
119 | 119 | 0.821 |
12 | 12 | 0.817 |
120 | 120 | 0.647 |
121 | 121 | 0.886 |
122 | 122 | 0.107 |
123 | 123 | 0.667 |
124 | 124 | 0.433 |
125 | 125 | 0.456 |
126 | 126 | 0.117 |
127 | 127 | 0.204 |
128 | 128 | 0.0953 |
129 | 129 | 0.601 |
13 | 13 | 0.00121 |
130 | 130 | 0.0466 |
131 | 131 | 0.287 |
132 | 132 | 0.182 |
133 | 133 | 0.102 |
134 | 134 | 0.942 |
135 | 135 | 0.31 |
136 | 136 | 0.0398 |
137 | 137 | 0.32 |
138 | 138 | 0.503 |
139 | 139 | 0.361 |
14 | 14 | 0.505 |
140 | 140 | 0.0181 |
141 | 141 | 0.0191 |
142 | 142 | 0.941 |
143 | 143 | 0.706 |
144 | 144 | 0.866 |
145 | 145 | 0.989 |
146 | 146 | 0.924 |
147 | 147 | 0.904 |
148 | 148 | 0.91 |
149 | 149 | 0.206 |
15 | 15 | 0.485 |
150 | 150 | 0.448 |
151 | 151 | 0.365 |
152 | 152 | 0.0733 |
153 | 153 | 0.952 |
154 | 154 | 0.366 |
155 | 155 | 0.153 |
156 | 156 | 0.447 |
157 | 157 | 0.41 |
158 | 158 | 0.888 |
159 | 159 | 0.135 |
16 | 16 | 0.865 |
160 | 160 | 0.583 |
161 | 161 | 0.0417 |
162 | 162 | 0.703 |
163 | 163 | 0.337 |
164 | 164 | 0.425 |
165 | 165 | 0.793 |
166 | 166 | 0.089 |
167 | 167 | 0.233 |
168 | 168 | 0.519 |
169 | 169 | 0.601 |
17 | 17 | 0.628 |
18 | 18 | 0.804 |
19 | 19 | 0.947 |
2 | 2 | 0.226 |
20 | 20 | 0.0745 |
21 | 21 | 0.339 |
22 | 22 | 0.614 |
23 | 23 | 0.0405 |
24 | 24 | 0.112 |
25 | 25 | 0.334 |
26 | 26 | 0.113 |
27 | 27 | 0.404 |
28 | 28 | 0.635 |
29 | 29 | 0.0223 |
3 | 3 | 0.37 |
30 | 30 | 0.155 |
31 | 31 | 0.593 |
32 | 32 | 0.112 |
33 | 33 | 0.0513 |
34 | 34 | 0.36 |
35 | 35 | 0.248 |
36 | 36 | 0.0283 |
37 | 37 | 0.257 |
38 | 38 | 0.289 |
39 | 39 | 0.237 |
4 | 4 | 0.0546 |
40 | 40 | 0.123 |
41 | 41 | 0.925 |
42 | 42 | 0.253 |
43 | 43 | 0.504 |
44 | 44 | 0.57 |
45 | 45 | 0.496 |
46 | 46 | 0.379 |
47 | 47 | 0.0196 |
48 | 48 | 0.139 |
49 | 49 | 0.112 |
5 | 5 | 0.805 |
50 | 50 | 0.937 |
51 | 51 | 0.969 |
52 | 52 | 0.0495 |
53 | 53 | 0.922 |
54 | 54 | 0.761 |
55 | 55 | 0.0235 |
56 | 56 | 0.818 |
57 | 57 | 0.269 |
58 | 58 | 0.399 |
59 | 59 | 0.977 |
6 | 6 | 0.325 |
60 | 60 | 0.43 |
61 | 61 | 0.074 |
62 | 62 | 0.327 |
63 | 63 | 0.475 |
64 | 64 | 0.402 |
65 | 65 | 0.629 |
66 | 66 | 5.17975e-6 |
67 | 67 | 0.559 |
68 | 68 | 0.177 |
69 | 69 | 0.652 |
7 | 7 | 0.0418 |
70 | 70 | 0.364 |
71 | 71 | 0.0233 |
72 | 72 | 0.319 |
73 | 73 | 0.82 |
74 | 74 | 0.479 |
75 | 75 | 0.00736 |
76 | 76 | 0.572 |
77 | 77 | 0.555 |
78 | 78 | 6.79721e-4 |
79 | 79 | 0.142 |
8 | 8 | 0.393 |
80 | 80 | 0.126 |
81 | 81 | 0.503 |
82 | 82 | 0.984 |
83 | 83 | 0.139 |
84 | 84 | 0.697 |
85 | 85 | 0.23 |
86 | 86 | 0.808 |
87 | 87 | 0.0856 |
88 | 88 | 0.873 |
89 | 89 | 0.77 |
9 | 9 | 0.441 |
90 | 90 | 0.429 |
91 | 91 | 0.0631 |
92 | 92 | 0.695 |
93 | 93 | 0.835 |
94 | 94 | 0.955 |
95 | 95 | 0.0267 |
96 | 96 | 0.537 |
97 | 97 | 0.365 |
98 | 98 | 0.219 |
99 | 99 | 0.602 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12334
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0100664 K-562 cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
2531 (hematologic cancer)
14566 (disease of cellular proliferation)
0060083 (immune system cancer)
1240 (leukemia)
1036 (chronic leukemia)
8692 (myeloid leukemia)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100737 (leukemia cell line sample)
0102580 (chronic myeloid leukemia cell line sample)
0101035 (hematopoietic cell line sample)
0100740 (myeloid leukemia cell line sample)
0100664 (K-562 cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)