FF:10840-111E3: Difference between revisions

Latest revision as of 15:08, 3 June 2020

Name:	plasma cell leukemia cell line:ARH-77
Species:	Human (Homo sapiens)
Library ID:	CNhs12807
Sample type:	cell lines
Genomic View:	UCSC
RefEX:	Specific genes
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	NA
sex	female
age	33
cell type	plasma cell
cell line	ARH-77
company	ATCC
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00004916

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12807		CAGE		DRX007985		DRR008857

Accession ID Hg19

Library id		BAM		CTSS
CNhs12807		DRZ000282		DRZ001667

Accession ID Hg38

Library id		BAM		CTSS
CNhs12807		DRZ011632		DRZ013017

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.101
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0.0182
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.548
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.00912
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0.0474
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0384
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0.0474
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0.892
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.0474
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.0336
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0.0901
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.0928
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.504
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0.0474
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0.0474
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.0205
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.0666
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.053
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0.0474
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.7
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.153
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.00134
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0474
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.0026
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.165
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.0474
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.486
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.0901
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.0474
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.0474
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0.0901
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0.145
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.356
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0.0474
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0.0474
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12807

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0139
MA0003.1	MA0003.1	0.522
MA0004.1	MA0004.1	0.0129
MA0006.1	MA0006.1	0.172
MA0007.1	MA0007.1	0.702
MA0009.1	MA0009.1	0.612
MA0014.1	MA0014.1	0.937
MA0017.1	MA0017.1	0.486
MA0018.2	MA0018.2	0.593
MA0019.1	MA0019.1	0.967
MA0024.1	MA0024.1	1.50395e-7
MA0025.1	MA0025.1	0.502
MA0027.1	MA0027.1	0.816
MA0028.1	MA0028.1	2.53444e-5
MA0029.1	MA0029.1	0.327
MA0030.1	MA0030.1	0.106
MA0031.1	MA0031.1	0.603
MA0035.2	MA0035.2	0.113
MA0038.1	MA0038.1	0.133
MA0039.2	MA0039.2	0.964
MA0040.1	MA0040.1	0.11
MA0041.1	MA0041.1	0.227
MA0042.1	MA0042.1	0.466
MA0043.1	MA0043.1	0.949
MA0046.1	MA0046.1	0.252
MA0047.2	MA0047.2	0.852
MA0048.1	MA0048.1	0.936
MA0050.1	MA0050.1	1.39552e-19
MA0051.1	MA0051.1	1.29241e-14
MA0052.1	MA0052.1	0.401
MA0055.1	MA0055.1	0.157
MA0057.1	MA0057.1	0.767
MA0058.1	MA0058.1	0.00846
MA0059.1	MA0059.1	2.43636e-4
MA0060.1	MA0060.1	4.98294e-17
MA0061.1	MA0061.1	3.37274e-9
MA0062.2	MA0062.2	2.02209e-8
MA0065.2	MA0065.2	0.0671
MA0066.1	MA0066.1	0.706
MA0067.1	MA0067.1	0.478
MA0068.1	MA0068.1	0.257
MA0069.1	MA0069.1	0.927
MA0070.1	MA0070.1	0.762
MA0071.1	MA0071.1	0.834
MA0072.1	MA0072.1	0.12
MA0073.1	MA0073.1	0.595
MA0074.1	MA0074.1	0.644
MA0076.1	MA0076.1	5.13093e-8
MA0077.1	MA0077.1	0.446
MA0078.1	MA0078.1	0.107
MA0079.2	MA0079.2	0.32
MA0080.2	MA0080.2	2.99287e-5
MA0081.1	MA0081.1	0.0209
MA0083.1	MA0083.1	0.416
MA0084.1	MA0084.1	0.105
MA0087.1	MA0087.1	0.0903
MA0088.1	MA0088.1	0.0274
MA0090.1	MA0090.1	1.91167e-5
MA0091.1	MA0091.1	0.856
MA0092.1	MA0092.1	0.521
MA0093.1	MA0093.1	0.0106
MA0099.2	MA0099.2	0.00131
MA0100.1	MA0100.1	0.0561
MA0101.1	MA0101.1	1.34007e-7
MA0102.2	MA0102.2	0.354
MA0103.1	MA0103.1	0.0204
MA0104.2	MA0104.2	1.04975e-4
MA0105.1	MA0105.1	4.25612e-8
MA0106.1	MA0106.1	0.903
MA0107.1	MA0107.1	3.70235e-8
MA0108.2	MA0108.2	0.101
MA0111.1	MA0111.1	0.522
MA0112.2	MA0112.2	0.927
MA0113.1	MA0113.1	0.307
MA0114.1	MA0114.1	0.197
MA0115.1	MA0115.1	0.272
MA0116.1	MA0116.1	0.00101
MA0117.1	MA0117.1	0.724
MA0119.1	MA0119.1	0.421
MA0122.1	MA0122.1	0.387
MA0124.1	MA0124.1	0.384
MA0125.1	MA0125.1	0.55
MA0131.1	MA0131.1	0.136
MA0135.1	MA0135.1	0.529
MA0136.1	MA0136.1	3.89651e-8
MA0137.2	MA0137.2	0.425
MA0138.2	MA0138.2	0.973
MA0139.1	MA0139.1	0.231
MA0140.1	MA0140.1	0.00625
MA0141.1	MA0141.1	0.431
MA0142.1	MA0142.1	0.194
MA0143.1	MA0143.1	0.287
MA0144.1	MA0144.1	0.0755
MA0145.1	MA0145.1	0.128
MA0146.1	MA0146.1	0.727
MA0147.1	MA0147.1	4.32092e-5
MA0148.1	MA0148.1	0.268
MA0149.1	MA0149.1	0.238
MA0150.1	MA0150.1	0.546
MA0152.1	MA0152.1	0.172
MA0153.1	MA0153.1	0.0943
MA0154.1	MA0154.1	0.012
MA0155.1	MA0155.1	0.556
MA0156.1	MA0156.1	1.7092e-9
MA0157.1	MA0157.1	0.924
MA0159.1	MA0159.1	0.218
MA0160.1	MA0160.1	0.375
MA0162.1	MA0162.1	0.492
MA0163.1	MA0163.1	2.8517e-8
MA0164.1	MA0164.1	0.262
MA0258.1	MA0258.1	0.514
MA0259.1	MA0259.1	0.0129

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12807

Novel motif	Logo	P-value
1	1	0.143
10	10	0.0245
100	100	0.216
101	101	0.457
102	102	0.473
103	103	0.332
104	104	0.579
105	105	0.479
106	106	0.801
107	107	0.313
108	108	0.938
109	109	0.0963
11	11	0.532
110	110	0.613
111	111	0.044
112	112	0.888
113	113	0.858
114	114	0.726
115	115	0.5
116	116	0.723
117	117	0.0313
118	118	0.56
119	119	0.395
12	12	0.674
120	120	0.871
121	121	0.195
122	122	0.344
123	123	0.202
124	124	0.019
125	125	0.559
126	126	0.132
127	127	0.561
128	128	0.145
129	129	0.294
13	13	0.0447
130	130	0.257
131	131	0.52
132	132	0.121
133	133	0.258
134	134	0.558
135	135	0.642
136	136	0.16
137	137	0.58
138	138	0.558
139	139	0.846
14	14	0.828
140	140	0.203
141	141	0.00515
142	142	0.791
143	143	0.0276
144	144	0.458
145	145	0.758
146	146	0.931
147	147	0.263
148	148	0.172
149	149	0.389
15	15	0.0592
150	150	0.859
151	151	0.161
152	152	0.0571
153	153	0.795
154	154	0.617
155	155	0.108
156	156	0.764
157	157	0.214
158	158	0.412
159	159	0.332
16	16	0.356
160	160	0.418
161	161	0.0374
162	162	0.558
163	163	0.948
164	164	0.958
165	165	0.912
166	166	0.253
167	167	0.134
168	168	0.719
169	169	0.216
17	17	0.913
18	18	0.419
19	19	0.496
2	2	0.133
20	20	0.106
21	21	0.44
22	22	0.499
23	23	0.207
24	24	0.0491
25	25	0.0622
26	26	0.152
27	27	0.92
28	28	0.561
29	29	0.00351
3	3	0.446
30	30	0.0761
31	31	0.794
32	32	0.189
33	33	0.3
34	34	0.519
35	35	0.231
36	36	0.0404
37	37	0.723
38	38	0.446
39	39	0.247
4	4	0.0381
40	40	0.114
41	41	0.492
42	42	0.263
43	43	0.455
44	44	0.213
45	45	0.261
46	46	0.454
47	47	0.128
48	48	0.273
49	49	0.159
5	5	0.637
50	50	0.741
51	51	0.697
52	52	0.186
53	53	0.777
54	54	0.283
55	55	0.184
56	56	0.941
57	57	0.798
58	58	0.07
59	59	0.657
6	6	0.988
60	60	0.933
61	61	0.229
62	62	0.131
63	63	0.59
64	64	0.773
65	65	0.691
66	66	4.18633e-5
67	67	0.491
68	68	0.229
69	69	0.83
7	7	0.128
70	70	0.789
71	71	0.0308
72	72	0.186
73	73	0.56
74	74	0.961
75	75	0.0185
76	76	0.153
77	77	0.0221
78	78	0.162
79	79	0.689
8	8	0.556
80	80	0.257
81	81	0.264
82	82	0.365
83	83	0.096
84	84	0.696
85	85	0.308
86	86	0.368
87	87	0.088
88	88	0.697
89	89	0.354
9	9	0.425
90	90	0.309
91	91	0.505
92	92	0.711
93	93	0.419
94	94	0.928
95	95	0.00716
96	96	0.8
97	97	0.179
98	98	0.832
99	99	0.0575

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12807

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
CL:0000786 plasma cell
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0102992 ARH-77 cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000151 (secretory cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000945 (lymphocyte of B lineage)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000946 (antibody secreting cell)
0000786 (plasma cell)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0101035 (hematopoietic cell line sample)
0100773 (lymphoblastoid cell line sample)
0101522 (B-lymphocyte cell line sample)
0102062 (B-lymphoblastoid cell line sample)
0102992 (ARH-77 cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000954 (small pre-B-II cell)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
+|DRA_sample_Accession=CAGE@SAMD00004916
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000144,CL:0000723,CL:0000048,CL:0000988,CL:0000548,CL:0000034,CL:0002032,CL:0000151,CL:0000012,CL:0002320,CL:0000063,CL:0002371,CL:0000542,CL:0000219,CL:0000945,CL:0000004,CL:0000134,CL:0000738,CL:0002087,CL:0000255,CL:0000236,CL:0000946,CL:0000817,CL:0000785,CL:0000838,CL:0002031,CL:0000955,CL:0000037,CL:0000566,CL:0000837,CL:0000786,CL:0000826,CL:0000051,CL:0000818,CL:0000980,CL:0000954,CL:0000816
+|accession_numbers=CAGE;DRX007985;DRR008857;DRZ000282;DRZ001667;DRZ011632;DRZ013017
+|ancestors_in_anatomy_facet=
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000151,CL:0002371,CL:0000542,CL:0000219,CL:0000945,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000946,CL:0000786
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0101035,FF:0100773,FF:0101522,FF:0102062,FF:0102992
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
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r8:81397846..81397860,+!p3@ZBTB10!0.22!1.04!ZBTB10;;chr14:74206359..74206374,-!p8@C14orf43!0.22!1.04!C14orf43;;chr2:25565377..25565389,-!p9@DNMT3A!0.22!0.81!DNMT3A;;chr13:20357063..20357105,-!p1@PSPC1!0.21!47.48!PSPC1;;chr11:85376121..85376181,-!p1@CREBZF!0.21!44.13!CREBZF;;chr19:6424783..6424802,-!p2@KHSRP!0.21!29.27!KHSRP;;chr1:235491462..235491510,-!p1@ARID4B!0.21!26.50!ARID4B;;chr1:247495140..247495177,-!p1@ZNF496!0.21!15.10!ZNF496;;chr6:41514305..41514359,+!p2@FOXP4!0.21!11.52!FOXP4;;chr12:2986206..2986258,-!p2@FOXM1!0.21!8.18!FOXM1;;chr1:8763440..8763460,-!p2@RERE!0.21!6.68!RERE;;chr7:26191809..26191890,+!p1@NFE2L3!0.21!6.57!NFE2L3;;chr12:80084333..80084380,-!p4@PAWR!0.21!6.34!PAWR;;chr15:77713025..77713081,+!p2@HMG20A!0.21!5.65!HMG20A;;chr12:72058130..72058189,+!p2@THAP2!0.21!5.53!THAP2;;chr19:12595586..12595637,-!p2@ZNF709!0.21!5.19!ZNF709;;chr1:42800848..42800859,-!p2@FOXJ3!0.21!3.34!FOXJ3;;chr2:178128250..178128293,-!p6@NFE2L2!0.21!2.88!NFE2L2;;chr6:151712800..151712835,-!p2@ZBTB2!0.21!2.54!ZBTB2;;chr2:174830043..174830071,-!p6@SP3!0.21!2.42!SP3;;chr8:42698494..42698507,-!p3@THAP1!0.21!1.96!THAP1;;chr9:102584159..102584174,+!p2@NR4A3!0.21!1.84!NR4A3;;chr7:137564014..137564042,-!p8@CREB3L2!0.21!1.73!CREB3L2;;chr8:124286670..124286702,-!p3@ZHX1!0.21!1.73!ZHX1;;chr19:12444440..12444455,-!p1@ZNF563!0.21!1.73!ZNF563;;chr15:31619871..31619884,+!p8@KLF13!0.21!1.61!KLF13;;chr18:42260059..42260132,+!p1@SETBP1!0.21!1.61!SETBP1;;chr19:49140572..49140594,-!p2@DBP!0.21!1.50!DBP;;chr3:107318157..107318172,+!p6@BBX!0.21!1.27!BBX;;chr4:146436110..146436135,+!p6@SMAD1!0.21!1.27!SMAD1;;chr4:106156933..106156947,+!p3@TET2!0.21!1.15!TET2;;chr1:6640110..6640130,+!p2@ZBTB48!0.21!1.15!ZBTB48;;chr1:8926369..8926385,-!p12@ENO1!0.21!1.15!ENO1;;chr11:6947647..6947698,+!p2@ZNF215!0.21!1.15!ZNF215;;chr6:45390343..45390388,+!p10@RUNX2!0.21!1.15!RUNX2;;chr18:14132422..14132440,-!p1@ZNF519!0.21!1.15!ZNF519;;chr11:65687222..65687240,+!p7@DRAP1!0.21!1.04!DRAP1;;chr2:61108808..61108821,+!p3@REL!0.21!1.04!REL;;chr2:148778934..148778965,+!p6@MBD5!0.21!0.92!MBD5;;chr3:141121369..141121392,+!p14@ZBTB38!0.21!0.92!ZBTB38;;chr12:27485889..27485900,+!p4@ARNTL2!0.21!0.92!ARNTL2;;chr8:128752734..128752763,+!p13@MYC!0.21!0.92!MYC;;chr2:187350973..187351072,+!p1@ZC3H15!0.20!125.61!ZC3H15;;chr2:231280908..231280945,+!p1@SP100!0.20!55.20!SP100;;chr13:115079949..115080022,+!p1@CHAMP1!0.20!39.41!CHAMP1;;chr4:144434584..144434709,+!p2@SMARCA5!0.20!33.19!SMARCA5;;chr1:59165724..59165751,-!p1@MYSM1!0.20!32.50!MYSM1;;chr12:104531945..104531996,-!p1@NFYB!0.20!19.47!NFYB;;chr21:30671235..30671253,+!p1@BACH1!0.20!17.86!BACH1;;chr14:23755297..23755350,-!p1@HOMEZ!0.20!16.36!HOMEZ;;chr1:151319710..151319774,-!p1@RFX5!0.20!13.60!RFX5;;chr3:129158715..129158766,-!p2@MBD4!0.20!13.25!MBD4;;chr2:70142189..70142223,+!p2@MXD1!0.20!9.56!MXD1;;chr4:140005443..140005527,-!p2@ELF2!0.20!7.84!ELF2;;chr18:45456930..45456967,-!p2@SMAD2!0.20!7.26!SMAD2;;chr19:56652643..56652683,+!p1@ZNF444!0.20!7.03!ZNF444;;chrX:129244840..129244881,-!p2@ELF4!0.20!4.72!ELF4;;chr12:104531854..104531893,-!p2@NFYB!0.20!4.49!NFYB;;chr18:74534479..74534551,+!p1@ZNF236!0.20!3.57!ZNF236;;chr1:78444714..78444725,-!p3@FUBP1!0.20!3.11!FUBP1;;chr17:41322332..41322351,-!p4@BRCA1!0.20!2.65!BRCA1;;chr17:36861675..36861697,+!p3@MLLT6!0.20!2.54!MLLT6;;chr2:113993052..113993097,-!p2@PAX8!0.20!2.42!PAX8;;chr12:53853054..53853092,+!p6@PCBP2!0.20!1.96!PCBP2;;chr12:6798692..6798723,-!p5@ZNF384!0.20!1.50!ZNF384;;chr4:87928166..87928186,+!p12@AFF1!0.20!1.38!AFF1;;chr6:27356527..27356557,+!p2@ZNF391!0.20!1.15!ZNF391;;chr10:98592751..98592765,+!p5@LCOR!0.20!1.04!LCOR;;chr6:126240356..126240379,+!p7@NCOA7!0.20!0.92!NCOA7;;chr17:46622205..46622218,-!p3@HOXB2!0.20!0.81!HOXB2;;chr2:25565344..25565369,-!p7@DNMT3A!0.20!0.81!DNMT3A;;chr2:100721310..100721325,-!p7@AFF3!0.20!0.58!AFF3;;chr2:157186630..157186686,-!p6@NR4A2!0.20!0.58!NR4A2;;chr2:214016467..214016482,-!p14@IKZF2!0.20!0.58!IKZF2;;chr3:141087562..141087594,+!p12@ZBTB38!0.20!0.58!ZBTB38;;chr3:141106458..141106491,+!p20@ZBTB38!0.20!0.58!ZBTB38;;chr3:141121820..141121838,+!p9@ZBTB38!0.20!0.58!ZBTB38;;chr4:106156800..106156812,+!p17@TET2!0.20!0.58!TET2;;chr14:99737850..99737852,-!p3@BCL11B!0.20!0.58!BCL11B;;chr15:76629064..76629073,+!p3@ISL2!0.20!0.58!ISL2;;chr16:88497018..88497035,+!p@chr16:88497018..88497035,+!0.20!0.58!ZNF469;;chr17:36871943..36871947,+!p8@MLLT6!0.20!0.58!MLLT6;;chr17:41277334..41277348,-!p6@BRCA1!0.20!0.58!BRCA1;;chr19:33865166..33865182,+!p7@CEBPG!0.20!0.58!CEBPG;;chr10:64575812..64575824,-!p4@EGR2!0.20!0.58!EGR2;;chr10:8097591..8097627,+!p7@GATA3!0.20!0.58!GATA3;;chr11:128392258..128392264,-!p7@ETS1!0.20!0.58!ETS1;;chr11:47399947..47399961,-!p3@SPI1!0.20!0.58!SPI1;;chr12:2968536..2968539,-!p3@FOXM1!0.20!0.58!FOXM1;;chr12:57914700..57914737,+!p7@MBD6!0.20!0.58!MBD6;;chr12:66358080..66358094,+!p15@HMGA2!0.20!0.58!HMGA2;;chr13:41556678..41556692,-!p15@ELF1!0.20!0.58!ELF1;;chr14:45722418..45722426,-!p6@MIS18BP1!0.20!0.58!MIS18BP1;;chr14:69263043.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+|ffid_belonging_in_development=CL:0000134,CL:0000051,CL:0000954
 |fonse_cell_line=FF:0101035,FF:0101522
 |fonse_cell_line_closure=FF:0101035,FF:0101522
@@ Line 35: / Line 41: @@
 |fonse_treatment_closure=
 |has_quality=
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+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/plasma%2520cell%2520leukemia%2520cell%2520line%253aARH-77.CNhs12807.10840-111E3.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/plasma%2520cell%2520leukemia%2520cell%2520line%253aARH-77.CNhs12807.10840-111E3.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/plasma%2520cell%2520leukemia%2520cell%2520line%253aARH-77.CNhs12807.10840-111E3.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/plasma%2520cell%2520leukemia%2520cell%2520line%253aARH-77.CNhs12807.10840-111E3.hg38.nobarcode.ctss.bed.gz
 |id=FF:10840-111E3
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 |name=plasma cell leukemia cell line:ARH-77
 |namespace=FANTOM5
@@ Line 42: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs12807,LSID972,release012,COMPLETED
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 |rna_box=111
 |rna_catalog_number=
@@ Line 54: / Line 75: @@
 |rna_rin=
 |rna_sample_type=total RNA
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+|rna_tube_id=1.11E+05
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 |sample_age=33
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 |sample_cell_catalog=CRL1621
 |sample_cell_line=ARH-77
@@ Line 69: / Line 91: @@
 |sample_ethnicity=C
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+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.67741938041552e-273!GO:0043227;membrane-bound organelle;3.29626793885442e-238!GO:0043231;intracellular membrane-bound organelle;8.51103477657043e-238!GO:0043226;organelle;2.8373379969928e-231!GO:0043229;intracellular organelle;2.05359877937386e-230!GO:0005737;cytoplasm;9.07779510282868e-177!GO:0044422;organelle part;1.311441078211e-159!GO:0044446;intracellular organelle part;2.27053759349604e-157!GO:0032991;macromolecular complex;2.04912395230785e-122!GO:0005634;nucleus;1.20535046082547e-120!GO:0044444;cytoplasmic part;1.97719643701729e-119!GO:0044237;cellular metabolic process;7.70449663136647e-112!GO:0044238;primary metabolic process;7.91530134357662e-110!GO:0043170;macromolecule metabolic process;4.42864502594786e-106!GO:0030529;ribonucleoprotein complex;4.01016473163704e-98!GO:0044428;nuclear part;6.46201443130213e-97!GO:0003723;RNA binding;1.21189223289066e-91!GO:0043233;organelle lumen;5.00636260065897e-89!GO:0031974;membrane-enclosed lumen;5.00636260065897e-89!GO:0005515;protein binding;7.66481750949383e-79!GO:0005739;mitochondrion;2.79964073358792e-74!GO:0043283;biopolymer metabolic process;5.05565364607917e-72!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.06129678030828e-65!GO:0043234;protein complex;1.78910210989182e-63!GO:0006412;translation;1.21635704602378e-61!GO:0006396;RNA processing;9.7456064225287e-61!GO:0010467;gene expression;1.70412440250063e-60!GO:0031981;nuclear lumen;1.04188633220367e-57!GO:0005840;ribosome;2.15908207916685e-55!GO:0044429;mitochondrial part;4.50278685880831e-51!GO:0019538;protein metabolic process;4.90664969744792e-50!GO:0006259;DNA metabolic process;1.03417048732901e-49!GO:0016071;mRNA metabolic process;2.47719101241041e-49!GO:0003735;structural constituent of ribosome;2.17788506160991e-48!GO:0031967;organelle envelope;1.39193708518923e-47!GO:0031090;organelle membrane;2.28045385497139e-47!GO:0031975;envelope;3.82227128242229e-47!GO:0033036;macromolecule localization;1.43751718098277e-45!GO:0044267;cellular protein metabolic process;3.041437721295e-45!GO:0044260;cellular macromolecule metabolic process;5.61880253561607e-45!GO:0003676;nucleic acid binding;9.86570139479189e-45!GO:0008380;RNA splicing;1.48544794618586e-44!GO:0009058;biosynthetic process;2.18403115804899e-44!GO:0009059;macromolecule biosynthetic process;5.25587496223642e-44!GO:0044249;cellular biosynthetic process;6.38322332099246e-44!GO:0015031;protein transport;7.16126077858606e-44!GO:0016043;cellular component organization and biogenesis;9.19277610010049e-43!GO:0006397;mRNA processing;1.53910181370531e-42!GO:0033279;ribosomal subunit;4.47946252868252e-42!GO:0045184;establishment of protein localization;9.26725268070694e-42!GO:0008104;protein localization;3.4690143665683e-41!GO:0006996;organelle organization and biogenesis;4.82741202065171e-40!GO:0005829;cytosol;4.67346613304666e-39!GO:0007049;cell cycle;4.01628571669166e-38!GO:0046907;intracellular transport;1.14373832331264e-37!GO:0005654;nucleoplasm;7.6448437072649e-37!GO:0065003;macromolecular complex assembly;1.75661437834957e-36!GO:0043228;non-membrane-bound organelle;2.26429675511878e-36!GO:0043232;intracellular non-membrane-bound organelle;2.26429675511878e-36!GO:0022613;ribonucleoprotein complex biogenesis and assembly;6.01261523742393e-36!GO:0000166;nucleotide binding;6.41939137554649e-34!GO:0005681;spliceosome;2.04827809784091e-32!GO:0022607;cellular component assembly;1.09851873929314e-31!GO:0005740;mitochondrial envelope;1.90345684767566e-31!GO:0006886;intracellular protein transport;2.34990296823488e-31!GO:0022402;cell cycle process;7.72938935474482e-31!GO:0016070;RNA metabolic process;1.22420693996463e-30!GO:0031966;mitochondrial membrane;3.86588862483391e-29!GO:0006974;response to DNA damage stimulus;4.28125505637873e-29!GO:0051649;establishment of cellular localization;4.45182317995327e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.66008790536722e-29!GO:0019866;organelle inner membrane;5.50066938036355e-29!GO:0005694;chromosome;1.21048402498865e-28!GO:0000278;mitotic cell cycle;1.80386482162021e-28!GO:0051641;cellular localization;2.32245324400634e-28!GO:0044451;nucleoplasm part;2.340229751075e-28!GO:0044445;cytosolic part;3.32338957144343e-27!GO:0005743;mitochondrial inner membrane;2.54439517121359e-26!GO:0044427;chromosomal part;4.73750808984418e-26!GO:0012501;programmed cell death;5.01055281071233e-26!GO:0006915;apoptosis;5.11728579907148e-26!GO:0006281;DNA repair;8.06944021129126e-25!GO:0022403;cell cycle phase;3.55679847979197e-24!GO:0032553;ribonucleotide binding;4.87194745336409e-24!GO:0032555;purine ribonucleotide binding;4.87194745336409e-24!GO:0016462;pyrophosphatase activity;1.47197134739119e-23!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.51289852004445e-23!GO:0016817;hydrolase activity, acting on acid anhydrides;2.01329821366716e-23!GO:0000087;M phase of mitotic cell cycle;2.10063125198999e-23!GO:0031980;mitochondrial lumen;2.23274723389832e-23!GO:0005759;mitochondrial matrix;2.23274723389832e-23!GO:0017076;purine nucleotide binding;3.87615408927716e-23!GO:0044455;mitochondrial membrane part;4.19926880449509e-23!GO:0007067;mitosis;4.86077655663816e-23!GO:0017111;nucleoside-triphosphatase activity;6.59871595575813e-23!GO:0008219;cell death;6.7704942293541e-23!GO:0016265;death;6.7704942293541e-23!GO:0051276;chromosome organization and biogenesis;1.53064858769311e-22!GO:0005730;nucleolus;2.63755628967981e-22!GO:0044265;cellular macromolecule catabolic process;3.68541941011796e-22!GO:0006119;oxidative phosphorylation;4.97415232339317e-22!GO:0015934;large ribosomal subunit;8.63955653195856e-22!GO:0006512;ubiquitin cycle;1.64697535764048e-21!GO:0015935;small ribosomal subunit;1.99165044368897e-21!GO:0008134;transcription factor binding;2.98836271715584e-21!GO:0016874;ligase activity;1.15622504412983e-20!GO:0000279;M phase;3.49039276416672e-20!GO:0022618;protein-RNA complex assembly;6.84168824233504e-20!GO:0005524;ATP binding;9.12276488060574e-20!GO:0006260;DNA replication;1.31806916125102e-19!GO:0051301;cell division;1.46957798114715e-19!GO:0043285;biopolymer catabolic process;1.76970351732383e-19!GO:0032559;adenyl ribonucleotide binding;3.51538336593803e-19!GO:0006457;protein folding;4.63019449132369e-19!GO:0012505;endomembrane system;5.28069141221889e-19!GO:0009057;macromolecule catabolic process;1.34039135947871e-18!GO:0019941;modification-dependent protein catabolic process;2.21430097403241e-18!GO:0043632;modification-dependent macromolecule catabolic process;2.21430097403241e-18!GO:0009719;response to endogenous stimulus;2.48030210494623e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;2.89921265860729e-18!GO:0044248;cellular catabolic process;3.63639469277409e-18!GO:0030554;adenyl nucleotide binding;3.68606816193653e-18!GO:0005746;mitochondrial respiratory chain;4.10618783815982e-18!GO:0044257;cellular protein catabolic process;4.41078616148199e-18!GO:0006511;ubiquitin-dependent protein catabolic process;5.42227516045153e-18!GO:0000502;proteasome complex (sensu Eukaryota);1.94278121695587e-17!GO:0006605;protein targeting;4.40020188829376e-17!GO:0005635;nuclear envelope;4.40020188829376e-17!GO:0051726;regulation of cell cycle;4.65401324094254e-17!GO:0005761;mitochondrial ribosome;5.81985254790853e-17!GO:0000313;organellar ribosome;5.81985254790853e-17!GO:0043412;biopolymer modification;6.90190801290026e-17!GO:0000074;regulation of progression through cell cycle;7.02175131824022e-17!GO:0042254;ribosome biogenesis and assembly;8.7161900236109e-17!GO:0008135;translation factor activity, nucleic acid binding;1.39295008408572e-16!GO:0006325;establishment and/or maintenance of chromatin architecture;1.54026077271853e-16!GO:0050136;NADH dehydrogenase (quinone) activity;2.6312862447029e-16!GO:0003954;NADH dehydrogenase activity;2.6312862447029e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.6312862447029e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.05385697228043e-16!GO:0031965;nuclear membrane;6.36791947914991e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;6.7713788126173e-16!GO:0000375;RNA splicing, via transesterification reactions;6.7713788126173e-16!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;6.7713788126173e-16!GO:0006323;DNA packaging;6.83167171673907e-16!GO:0006913;nucleocytoplasmic transport;1.0480655846728e-15!GO:0016604;nuclear body;2.49923263626246e-15!GO:0042981;regulation of apoptosis;2.71022160858573e-15!GO:0051169;nuclear transport;2.90106529510468e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.64406835943139e-15!GO:0043067;regulation of programmed cell death;4.42313316733633e-15!GO:0006464;protein modification process;1.18585766708041e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.2020881848928e-14!GO:0030163;protein catabolic process;1.98988423537093e-14!GO:0003712;transcription cofactor activity;2.05380195823216e-14!GO:0044453;nuclear membrane part;2.38611714017492e-14!GO:0051082;unfolded protein binding;3.1885955201846e-14!GO:0048770;pigment granule;3.25482110201366e-14!GO:0042470;melanosome;3.25482110201366e-14!GO:0042775;organelle ATP synthesis coupled electron transport;3.25482110201366e-14!GO:0042773;ATP synthesis coupled electron transport;3.25482110201366e-14!GO:0030964;NADH dehydrogenase complex (quinone);3.66598312713143e-14!GO:0045271;respiratory chain complex I;3.66598312713143e-14!GO:0005747;mitochondrial respiratory chain complex I;3.66598312713143e-14!GO:0005783;endoplasmic reticulum;4.61584496568042e-14!GO:0050794;regulation of cellular process;7.5793889420014e-14!GO:0043687;post-translational protein modification;8.00802294443564e-14!GO:0042623;ATPase activity, coupled;8.07771076326283e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.08338326336221e-13!GO:0016887;ATPase activity;1.74108272357512e-13!GO:0000785;chromatin;1.86502942763565e-13!GO:0006366;transcription from RNA polymerase II promoter;2.04009909018637e-13!GO:0004386;helicase activity;2.30111375236631e-13!GO:0006333;chromatin assembly or disassembly;3.34896490099364e-13!GO:0065004;protein-DNA complex assembly;7.6668615718874e-13!GO:0044432;endoplasmic reticulum part;1.09686685401208e-12!GO:0005643;nuclear pore;1.60323666198322e-12!GO:0051186;cofactor metabolic process;2.57057217295169e-12!GO:0006446;regulation of translational initiation;3.26064490234345e-12!GO:0006413;translational initiation;4.57834316818677e-12!GO:0050657;nucleic acid transport;6.46753186635117e-12!GO:0051236;establishment of RNA localization;6.46753186635117e-12!GO:0050658;RNA transport;6.46753186635117e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.46753186635117e-12!GO:0006403;RNA localization;6.56309726327426e-12!GO:0048193;Golgi vesicle transport;7.07351895705369e-12!GO:0017038;protein import;7.66140383313391e-12!GO:0016607;nuclear speck;1.05895391419369e-11!GO:0006364;rRNA processing;2.70781166654632e-11!GO:0065002;intracellular protein transport across a membrane;3.83751967652425e-11!GO:0003743;translation initiation factor activity;3.87345522812065e-11!GO:0016072;rRNA metabolic process;5.31359175208118e-11!GO:0008639;small protein conjugating enzyme activity;7.66829333010926e-11!GO:0016779;nucleotidyltransferase activity;8.35422651335023e-11!GO:0006399;tRNA metabolic process;1.37918960651505e-10!GO:0004842;ubiquitin-protein ligase activity;1.53196129590657e-10!GO:0008026;ATP-dependent helicase activity;1.56740901610247e-10!GO:0005794;Golgi apparatus;2.25061219296544e-10!GO:0009056;catabolic process;2.2765754608583e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.31169980114065e-10!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.57989786868067e-10!GO:0006261;DNA-dependent DNA replication;2.5915783881835e-10!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.70428420907831e-10!GO:0019787;small conjugating protein ligase activity;3.33712198339531e-10!GO:0005789;endoplasmic reticulum membrane;3.33712198339531e-10!GO:0016568;chromatin modification;3.64714418419467e-10!GO:0051246;regulation of protein metabolic process;3.6766278084482e-10!GO:0046930;pore complex;5.2257579320067e-10!GO:0006732;coenzyme metabolic process;6.28211372917658e-10!GO:0051028;mRNA transport;6.54920234186317e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;7.4050649829775e-10!GO:0000775;chromosome, pericentric region;8.20508293094879e-10!GO:0006793;phosphorus metabolic process;8.47967245261639e-10!GO:0006796;phosphate metabolic process;8.47967245261639e-10!GO:0009055;electron carrier activity;9.29709765827981e-10!GO:0006334;nucleosome assembly;1.15604409320153e-09!GO:0043566;structure-specific DNA binding;1.16371926658401e-09!GO:0019222;regulation of metabolic process;1.21139834285739e-09!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.26728843878399e-09!GO:0050789;regulation of biological process;1.36554031878877e-09!GO:0009259;ribonucleotide metabolic process;1.4955281381621e-09!GO:0007005;mitochondrion organization and biogenesis;1.77842913128143e-09!GO:0006461;protein complex assembly;1.95907246939688e-09!GO:0031497;chromatin assembly;2.39225187562627e-09!GO:0016563;transcription activator activity;2.65168156357564e-09!GO:0048523;negative regulation of cellular process;2.77178482705346e-09!GO:0006163;purine nucleotide metabolic process;3.57387447990963e-09!GO:0003697;single-stranded DNA binding;3.92965728377511e-09!GO:0016881;acid-amino acid ligase activity;4.3082214972372e-09!GO:0009615;response to virus;5.02227055618638e-09!GO:0006164;purine nucleotide biosynthetic process;7.35874363802275e-09!GO:0030532;small nuclear ribonucleoprotein complex;8.05037924215594e-09!GO:0006916;anti-apoptosis;8.05493823457559e-09!GO:0043069;negative regulation of programmed cell death;9.20968760747708e-09!GO:0009260;ribonucleotide biosynthetic process;9.69080814136856e-09!GO:0016192;vesicle-mediated transport;1.01022785886759e-08!GO:0008565;protein transporter activity;1.03333437460925e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.03343902615847e-08!GO:0003713;transcription coactivator activity;1.06472173332014e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.09669974524476e-08!GO:0043066;negative regulation of apoptosis;1.18798547504957e-08!GO:0051170;nuclear import;2.11066177066343e-08!GO:0009060;aerobic respiration;2.20869627024183e-08!GO:0000075;cell cycle checkpoint;2.22847783047219e-08!GO:0016310;phosphorylation;2.31083349097768e-08!GO:0009150;purine ribonucleotide metabolic process;2.47352584418491e-08!GO:0045333;cellular respiration;2.54058800925997e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.97045575863772e-08!GO:0004812;aminoacyl-tRNA ligase activity;2.97045575863772e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.97045575863772e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.97553853405113e-08!GO:0051325;interphase;4.04772454779727e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;4.26332496960813e-08!GO:0005819;spindle;4.47756206058448e-08!GO:0005839;proteasome core complex (sensu Eukaryota);4.75201968730832e-08!GO:0016740;transferase activity;4.79897188440933e-08!GO:0051188;cofactor biosynthetic process;4.81927676555905e-08!GO:0009152;purine ribonucleotide biosynthetic process;5.03015668321701e-08!GO:0006606;protein import into nucleus;5.5524559208067e-08!GO:0043038;amino acid activation;5.57364821937817e-08!GO:0006418;tRNA aminoacylation for protein translation;5.57364821937817e-08!GO:0043039;tRNA aminoacylation;5.57364821937817e-08!GO:0051329;interphase of mitotic cell cycle;6.95052531143024e-08!GO:0019899;enzyme binding;7.2364786578425e-08!GO:0016787;hydrolase activity;8.86295890502305e-08!GO:0048519;negative regulation of biological process;9.20672183601973e-08!GO:0000245;spliceosome assembly;9.59226883283719e-08!GO:0032446;protein modification by small protein conjugation;9.69923689766796e-08!GO:0003924;GTPase activity;1.20132686969535e-07!GO:0019829;cation-transporting ATPase activity;1.24566957224841e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.37966310073858e-07!GO:0030120;vesicle coat;1.50020063394811e-07!GO:0030662;coated vesicle membrane;1.50020063394811e-07!GO:0031323;regulation of cellular metabolic process;1.60650687934383e-07!GO:0005793;ER-Golgi intermediate compartment;1.66204364262316e-07!GO:0007243;protein kinase cascade;1.67426285197826e-07!GO:0043065;positive regulation of apoptosis;1.68625752729195e-07!GO:0007088;regulation of mitosis;1.85841645986658e-07!GO:0005657;replication fork;1.92115938626264e-07!GO:0015986;ATP synthesis coupled proton transport;2.01306216598519e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.01306216598519e-07!GO:0007051;spindle organization and biogenesis;2.13799909916757e-07!GO:0016567;protein ubiquitination;2.17196348166593e-07!GO:0005525;GTP binding;2.45497529805187e-07!GO:0043068;positive regulation of programmed cell death;2.50623540657455e-07!GO:0048475;coated membrane;2.81521583426198e-07!GO:0030117;membrane coat;2.81521583426198e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.23485795408454e-07!GO:0015630;microtubule cytoskeleton;3.35612838483464e-07!GO:0004298;threonine endopeptidase activity;3.35612838483464e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.48760340051358e-07!GO:0006099;tricarboxylic acid cycle;4.61166845418531e-07!GO:0046356;acetyl-CoA catabolic process;4.61166845418531e-07!GO:0015078;hydrogen ion transmembrane transporter activity;4.66279029270827e-07!GO:0005667;transcription factor complex;5.14804141196892e-07!GO:0045259;proton-transporting ATP synthase complex;5.31008134458352e-07!GO:0008094;DNA-dependent ATPase activity;5.71211086949338e-07!GO:0048522;positive regulation of cellular process;6.81773749472842e-07!GO:0031324;negative regulation of cellular metabolic process;7.64566113733673e-07!GO:0005768;endosome;7.80873679161694e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.06990226728567e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.06990226728567e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.12641990950917e-06!GO:0016564;transcription repressor activity;1.28650109748565e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.32465540605242e-06!GO:0006084;acetyl-CoA metabolic process;1.35381605382752e-06!GO:0045786;negative regulation of progression through cell cycle;1.35570131115748e-06!GO:0006310;DNA recombination;1.38518577321445e-06!GO:0009108;coenzyme biosynthetic process;1.43891951480383e-06!GO:0009141;nucleoside triphosphate metabolic process;1.44555459118104e-06!GO:0051168;nuclear export;1.52562680338836e-06!GO:0006754;ATP biosynthetic process;1.67176481308441e-06!GO:0006753;nucleoside phosphate metabolic process;1.67176481308441e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.00955444033573e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.00955444033573e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.40988594760522e-06!GO:0009144;purine nucleoside triphosphate metabolic process;2.40988594760522e-06!GO:0046034;ATP metabolic process;3.00566016431992e-06!GO:0003714;transcription corepressor activity;3.24050114788498e-06!GO:0009109;coenzyme catabolic process;3.47600865986788e-06!GO:0006350;transcription;3.57280627076508e-06!GO:0007059;chromosome segregation;3.66220512705578e-06!GO:0005762;mitochondrial large ribosomal subunit;3.83401484270734e-06!GO:0000315;organellar large ribosomal subunit;3.83401484270734e-06!GO:0006917;induction of apoptosis;4.09950742819712e-06!GO:0005770;late endosome;4.10645386012765e-06!GO:0006401;RNA catabolic process;4.28394502692256e-06!GO:0003899;DNA-directed RNA polymerase activity;4.28394502692256e-06!GO:0032561;guanyl ribonucleotide binding;4.38440547919859e-06!GO:0019001;guanyl nucleotide binding;4.38440547919859e-06!GO:0006302;double-strand break repair;4.43787569529782e-06!GO:0006613;cotranslational protein targeting to membrane;4.43787569529782e-06!GO:0003724;RNA helicase activity;4.76179235124309e-06!GO:0005813;centrosome;5.05880328280188e-06!GO:0051052;regulation of DNA metabolic process;5.15107940132824e-06!GO:0006417;regulation of translation;5.32387591553978e-06!GO:0012502;induction of programmed cell death;5.63926921390955e-06!GO:0051187;cofactor catabolic process;5.82048290568227e-06!GO:0065009;regulation of a molecular function;6.01077819789371e-06!GO:0009117;nucleotide metabolic process;6.38701684125545e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.61119295339e-06!GO:0016469;proton-transporting two-sector ATPase complex;6.77310564002573e-06!GO:0000786;nucleosome;6.89666705663274e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;8.52113382916344e-06!GO:0006752;group transfer coenzyme metabolic process;9.02271677346303e-06!GO:0005815;microtubule organizing center;1.0153980290218e-05!GO:0000079;regulation of cyclin-dependent protein kinase activity;1.02422178797613e-05!GO:0043623;cellular protein complex assembly;1.02621263499883e-05!GO:0065007;biological regulation;1.04232850127667e-05!GO:0000151;ubiquitin ligase complex;1.18098905973528e-05!GO:0010468;regulation of gene expression;1.50764524805242e-05!GO:0000314;organellar small ribosomal subunit;1.52893698330537e-05!GO:0005763;mitochondrial small ribosomal subunit;1.52893698330537e-05!GO:0009892;negative regulation of metabolic process;1.99367645827784e-05!GO:0004527;exonuclease activity;2.01628873985472e-05!GO:0008632;apoptotic program;2.17257701386498e-05!GO:0000776;kinetochore;2.60386560790002e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.84965117146835e-05!GO:0031072;heat shock protein binding;2.8713008259846e-05!GO:0007093;mitotic cell cycle checkpoint;3.26827174214995e-05!GO:0003690;double-stranded DNA binding;3.28738817381056e-05!GO:0003684;damaged DNA binding;3.29180085580393e-05!GO:0051427;hormone receptor binding;3.58196280131065e-05!GO:0006839;mitochondrial transport;3.76083933152677e-05!GO:0005798;Golgi-associated vesicle;3.92475532164041e-05!GO:0006402;mRNA catabolic process;3.9938492418617e-05!GO:0043021;ribonucleoprotein binding;4.09163874896427e-05!GO:0043681;protein import into mitochondrion;4.83476778280344e-05!GO:0048518;positive regulation of biological process;5.06936525333326e-05!GO:0006612;protein targeting to membrane;5.54816966834061e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.71519569197006e-05!GO:0031326;regulation of cellular biosynthetic process;5.88868726863026e-05!GO:0006414;translational elongation;6.0264576951543e-05!GO:0004518;nuclease activity;7.27772127150988e-05!GO:0044440;endosomal part;7.34321054847213e-05!GO:0010008;endosome membrane;7.34321054847213e-05!GO:0035257;nuclear hormone receptor binding;7.46468576576895e-05!GO:0051252;regulation of RNA metabolic process;7.64409714440142e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;7.75187611696465e-05!GO:0016363;nuclear matrix;8.6188879482373e-05!GO:0003729;mRNA binding;9.48535698655348e-05!GO:0003678;DNA helicase activity;0.000103755661833515!GO:0044431;Golgi apparatus part;0.000105636106840224!GO:0016481;negative regulation of transcription;0.000110049899485262!GO:0008654;phospholipid biosynthetic process;0.000110289107036437!GO:0007242;intracellular signaling cascade;0.000110869689161015!GO:0007006;mitochondrial membrane organization and biogenesis;0.000112051126586345!GO:0030880;RNA polymerase complex;0.000113724573270949!GO:0003677;DNA binding;0.000129262814315117!GO:0005773;vacuole;0.000139472974060691!GO:0030658;transport vesicle membrane;0.000140453883524343!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00015414794405029!GO:0000323;lytic vacuole;0.00017241437891841!GO:0005764;lysosome;0.00017241437891841!GO:0008186;RNA-dependent ATPase activity;0.000174227743553863!GO:0048468;cell development;0.000194621560607521!GO:0005048;signal sequence binding;0.00021558663319836!GO:0032774;RNA biosynthetic process;0.000224656749789206!GO:0006383;transcription from RNA polymerase III promoter;0.000225986277437545!GO:0006352;transcription initiation;0.000235914651155673!GO:0044452;nucleolar part;0.000235914651155673!GO:0000082;G1/S transition of mitotic cell cycle;0.000241414740040514!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000263100781959973!GO:0000428;DNA-directed RNA polymerase complex;0.000263100781959973!GO:0006351;transcription, DNA-dependent;0.000280542319678618!GO:0016741;transferase activity, transferring one-carbon groups;0.000322910091173852!GO:0009967;positive regulation of signal transduction;0.000323184038417249!GO:0048471;perinuclear region of cytoplasm;0.000352382421011913!GO:0042802;identical protein binding;0.000361902658772091!GO:0005885;Arp2/3 protein complex;0.00038396395827431!GO:0004674;protein serine/threonine kinase activity;0.00038396395827431!GO:0006950;response to stress;0.00038396395827431!GO:0051789;response to protein stimulus;0.000390781299754583!GO:0006986;response to unfolded protein;0.000390781299754583!GO:0016853;isomerase activity;0.000408729737478037!GO:0046822;regulation of nucleocytoplasmic transport;0.000413129776870675!GO:0016251;general RNA polymerase II transcription factor activity;0.000414183123547189!GO:0033673;negative regulation of kinase activity;0.000453584488264662!GO:0006469;negative regulation of protein kinase activity;0.000453584488264662!GO:0006626;protein targeting to mitochondrion;0.000469284355775613!GO:0009889;regulation of biosynthetic process;0.000475435780780087!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000491175728240698!GO:0008168;methyltransferase activity;0.00051218818883203!GO:0007052;mitotic spindle organization and biogenesis;0.000512736436093811!GO:0004004;ATP-dependent RNA helicase activity;0.000523193962816263!GO:0050790;regulation of catalytic activity;0.000559127108531439!GO:0051348;negative regulation of transferase activity;0.00056199569356205!GO:0030660;Golgi-associated vesicle membrane;0.000565622218621357!GO:0009165;nucleotide biosynthetic process;0.000568490933797947!GO:0015631;tubulin binding;0.000568490933797947!GO:0008033;tRNA processing;0.00057531167658995!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.0005904465167774!GO:0030867;rough endoplasmic reticulum membrane;0.000622922100582375!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000648213055246634!GO:0051223;regulation of protein transport;0.000729015794952189!GO:0016859;cis-trans isomerase activity;0.000738813516074758!GO:0031968;organelle outer membrane;0.00075237572672084!GO:0003746;translation elongation factor activity;0.000771609353261426!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000774019676176741!GO:0006611;protein export from nucleus;0.000785546473474583!GO:0032508;DNA duplex unwinding;0.00081872812951605!GO:0032392;DNA geometric change;0.00081872812951605!GO:0019867;outer membrane;0.000843568201013!GO:0045454;cell redox homeostasis;0.000930523742050453!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000945372827217379!GO:0048500;signal recognition particle;0.000945372827217379!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000960792733881858!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000960792733881858!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000960792733881858!GO:0031970;organelle envelope lumen;0.000962439551937792!GO:0005741;mitochondrial outer membrane;0.000965367285351882!GO:0006405;RNA export from nucleus;0.000990115003636505!GO:0043488;regulation of mRNA stability;0.00106964957696867!GO:0043487;regulation of RNA stability;0.00106964957696867!GO:0004532;exoribonuclease activity;0.00106964957696867!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00106964957696867!GO:0031982;vesicle;0.00108721292228197!GO:0030384;phosphoinositide metabolic process;0.00108981611711944!GO:0032200;telomere organization and biogenesis;0.00112830325998917!GO:0000723;telomere maintenance;0.00112830325998917!GO:0000049;tRNA binding;0.00112842204034627!GO:0031988;membrane-bound vesicle;0.00113492545780597!GO:0006650;glycerophospholipid metabolic process;0.00113492545780597!GO:0008312;7S RNA binding;0.00120244300260784!GO:0000139;Golgi membrane;0.00120539334158808!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00121742219778567!GO:0015399;primary active transmembrane transporter activity;0.00121742219778567!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00125997193182185!GO:0005769;early endosome;0.00130917036219262!GO:0043596;nuclear replication fork;0.00138005112957509!GO:0000228;nuclear chromosome;0.00139624666052865!GO:0006891;intra-Golgi vesicle-mediated transport;0.00140169861455387!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00142690851576629!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00142690851576629!GO:0003702;RNA polymerase II transcription factor activity;0.00143610461117577!GO:0046483;heterocycle metabolic process;0.00144351834659681!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00145169669086576!GO:0005637;nuclear inner membrane;0.00147842648888538!GO:0045449;regulation of transcription;0.00150657516114439!GO:0006270;DNA replication initiation;0.00152897439517736!GO:0007264;small GTPase mediated signal transduction;0.00153337217121784!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00155066487179634!GO:0007050;cell cycle arrest;0.00157034428376659!GO:0022411;cellular component disassembly;0.0015742899173196!GO:0005684;U2-dependent spliceosome;0.0015742899173196!GO:0051338;regulation of transferase activity;0.00159069796807364!GO:0003682;chromatin binding;0.00161258216800185!GO:0006268;DNA unwinding during replication;0.00169245211809443!GO:0047485;protein N-terminus binding;0.00180256555767231!GO:0005758;mitochondrial intermembrane space;0.00180335102445227!GO:0051920;peroxiredoxin activity;0.00181093379246725!GO:0043549;regulation of kinase activity;0.00181335184508504!GO:0000819;sister chromatid segregation;0.00182882994238228!GO:0008408;3'-5' exonuclease activity;0.00185278588570493!GO:0000070;mitotic sister chromatid segregation;0.00190364673804024!GO:0006275;regulation of DNA replication;0.00190364673804024!GO:0031124;mRNA 3'-end processing;0.00202090925801165!GO:0009116;nucleoside metabolic process;0.00202771233948594!GO:0000059;protein import into nucleus, docking;0.00204752534476489!GO:0008139;nuclear localization sequence binding;0.00210671496023724!GO:0003711;transcription elongation regulator activity;0.00210891894406739!GO:0051235;maintenance of localization;0.00215050273035451!GO:0045045;secretory pathway;0.00221888529144649!GO:0031252;leading edge;0.00225983520341087!GO:0006091;generation of precursor metabolites and energy;0.00229543290072354!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00229560994257731!GO:0045941;positive regulation of transcription;0.00231519830068217!GO:0030118;clathrin coat;0.00233923994839789!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00240268241368636!GO:0045047;protein targeting to ER;0.00240268241368636!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00249491305062713!GO:0006520;amino acid metabolic process;0.00255752427236054!GO:0016023;cytoplasmic membrane-bound vesicle;0.00258365002347416!GO:0033116;ER-Golgi intermediate compartment membrane;0.00259182641337806!GO:0030133;transport vesicle;0.00266236066922085!GO:0030134;ER to Golgi transport vesicle;0.00277957860926194!GO:0045892;negative regulation of transcription, DNA-dependent;0.00278540719129489!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00281738655348397!GO:0016197;endosome transport;0.0028397411986684!GO:0009893;positive regulation of metabolic process;0.00293909472441427!GO:0000922;spindle pole;0.00298801081442121!GO:0016126;sterol biosynthetic process;0.00300766453938421!GO:0042770;DNA damage response, signal transduction;0.00300766453938421!GO:0015980;energy derivation by oxidation of organic compounds;0.0030317417078895!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00314920139906072!GO:0045859;regulation of protein kinase activity;0.00314920139906072!GO:0046467;membrane lipid biosynthetic process;0.00318308705893195!GO:0031410;cytoplasmic vesicle;0.00319535282679344!GO:0031902;late endosome membrane;0.00321141168473109!GO:0003725;double-stranded RNA binding;0.00321141168473109!GO:0006289;nucleotide-excision repair;0.00324946636115405!GO:0030663;COPI coated vesicle membrane;0.00333535332558757!GO:0030126;COPI vesicle coat;0.00333535332558757!GO:0006595;polyamine metabolic process;0.00345558389018094!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00348464269599497!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00350121268952156!GO:0005876;spindle microtubule;0.00353110299649166!GO:0008234;cysteine-type peptidase activity;0.00353445199050188!GO:0006144;purine base metabolic process;0.00360667304366189!GO:0048487;beta-tubulin binding;0.00362093526937327!GO:0006338;chromatin remodeling;0.00362093526937327!GO:0019904;protein domain specific binding;0.00362093526937327!GO:0042613;MHC class II protein complex;0.00366852058412096!GO:0030127;COPII vesicle coat;0.00367020616098837!GO:0012507;ER to Golgi transport vesicle membrane;0.00367020616098837!GO:0000178;exosome (RNase complex);0.00367579007928459!GO:0042393;histone binding;0.00375612649683905!GO:0046966;thyroid hormone receptor binding;0.00381640230839923!GO:0006284;base-excision repair;0.00381640230839923!GO:0016272;prefoldin complex;0.00381640230839923!GO:0030518;steroid hormone receptor signaling pathway;0.00381640230839923!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00392791499947682!GO:0000725;recombinational repair;0.00421634923679572!GO:0000724;double-strand break repair via homologous recombination;0.00421634923679572!GO:0030433;ER-associated protein catabolic process;0.00428617401938936!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.00428617401938936!GO:0032940;secretion by cell;0.00438950222440165!GO:0019752;carboxylic acid metabolic process;0.00452729174047379!GO:0006007;glucose catabolic process;0.00457215390984442!GO:0042113;B cell activation;0.00463517642257679!GO:0005788;endoplasmic reticulum lumen;0.00466052421881504!GO:0046489;phosphoinositide biosynthetic process;0.00473834026334531!GO:0000175;3'-5'-exoribonuclease activity;0.0047807674766407!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0048956366027341!GO:0016584;nucleosome positioning;0.00499121868216308!GO:0031570;DNA integrity checkpoint;0.0050760787863409!GO:0051087;chaperone binding;0.00509915190238163!GO:0046649;lymphocyte activation;0.00511064674803556!GO:0016491;oxidoreductase activity;0.00515419717398248!GO:0006818;hydrogen transport;0.00515419717398248!GO:0009112;nucleobase metabolic process;0.00518434912841963!GO:0030137;COPI-coated vesicle;0.00535243063494905!GO:0046474;glycerophospholipid biosynthetic process;0.00536901362613184!GO:0006082;organic acid metabolic process;0.00545270194465344!GO:0045893;positive regulation of transcription, DNA-dependent;0.00566418216396605!GO:0005853;eukaryotic translation elongation factor 1 complex;0.00573681447459155!GO:0006984;ER-nuclear signaling pathway;0.0057434928611533!GO:0043022;ribosome binding;0.00602493028065863!GO:0000781;chromosome, telomeric region;0.00603281951542479!GO:0051539;4 iron, 4 sulfur cluster binding;0.00609052807159879!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00611109526100569!GO:0051053;negative regulation of DNA metabolic process;0.0061451807251997!GO:0007010;cytoskeleton organization and biogenesis;0.0062336157442909!GO:0007017;microtubule-based process;0.00623688315834428!GO:0031325;positive regulation of cellular metabolic process;0.00624912181072897!GO:0031123;RNA 3'-end processing;0.00628395244295573!GO:0022415;viral reproductive process;0.00633512021825887!GO:0008637;apoptotic mitochondrial changes;0.00633512021825887!GO:0009124;nucleoside monophosphate biosynthetic process;0.00652221878726237!GO:0009123;nucleoside monophosphate metabolic process;0.00652221878726237!GO:0004003;ATP-dependent DNA helicase activity;0.00654210738736385!GO:0043601;nuclear replisome;0.0066164509512957!GO:0030894;replisome;0.0066164509512957!GO:0015992;proton transport;0.00669325899441093!GO:0030176;integral to endoplasmic reticulum membrane;0.00694809778667893!GO:0051540;metal cluster binding;0.00701260300762573!GO:0051536;iron-sulfur cluster binding;0.00701260300762573!GO:0000339;RNA cap binding;0.0072049118913526!GO:0035258;steroid hormone receptor binding;0.00723492757197004!GO:0006376;mRNA splice site selection;0.0075478074500499!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0075478074500499!GO:0043284;biopolymer biosynthetic process;0.00772154628698322!GO:0005669;transcription factor TFIID complex;0.00782778691354696!GO:0032259;methylation;0.00794672435168869!GO:0000209;protein polyubiquitination;0.00802569290982778!GO:0003887;DNA-directed DNA polymerase activity;0.0081301644895638!GO:0050851;antigen receptor-mediated signaling pathway;0.00827375612874551!GO:0004536;deoxyribonuclease activity;0.00856640268441145!GO:0030521;androgen receptor signaling pathway;0.00861303332525762!GO:0007004;telomere maintenance via telomerase;0.00861577985204329!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00863832250382165!GO:0043492;ATPase activity, coupled to movement of substances;0.00866321283188178!GO:0005832;chaperonin-containing T-complex;0.00918268533447013!GO:0005663;DNA replication factor C complex;0.00922458024160672!GO:0006355;regulation of transcription, DNA-dependent;0.00930388784199161!GO:0022890;inorganic cation transmembrane transporter activity;0.00939242100516503!GO:0032507;maintenance of cellular protein localization;0.00939260133123921!GO:0030968;unfolded protein response;0.00956507872891272!GO:0006695;cholesterol biosynthetic process;0.00957887728910176!GO:0008610;lipid biosynthetic process;0.00966814118307888!GO:0045069;regulation of viral genome replication;0.00966814118307888!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0100442921937705!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0100723454483282!GO:0006643;membrane lipid metabolic process;0.0101992340219944!GO:0000287;magnesium ion binding;0.0102550733704413!GO:0051098;regulation of binding;0.0105680237596798!GO:0004722;protein serine/threonine phosphatase activity;0.0107816248747176!GO:0044450;microtubule organizing center part;0.010795139593829!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0108543075728093!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.011242608972721!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0114037858417785!GO:0015002;heme-copper terminal oxidase activity;0.0114037858417785!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0114037858417785!GO:0004129;cytochrome-c oxidase activity;0.0114037858417785!GO:0044454;nuclear chromosome part;0.0115342763224025!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0118661474909651!GO:0043130;ubiquitin binding;0.0120663806458815!GO:0032182;small conjugating protein binding;0.0120663806458815!GO:0005791;rough endoplasmic reticulum;0.0121160101821961!GO:0043414;biopolymer methylation;0.0121555310931312!GO:0043086;negative regulation of catalytic activity;0.0124706382001217!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0125315368178453!GO:0019783;small conjugating protein-specific protease activity;0.0125880459408856!GO:0009451;RNA modification;0.0126463610709039!GO:0016791;phosphoric monoester hydrolase activity;0.0126463610709039!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0126463610709039!GO:0008287;protein serine/threonine phosphatase complex;0.0127964715288005!GO:0046983;protein dimerization activity;0.0130114034505741!GO:0030125;clathrin vesicle coat;0.0137665991916041!GO:0030665;clathrin coated vesicle membrane;0.0137665991916041!GO:0051051;negative regulation of transport;0.0139732445711171!GO:0005774;vacuolar membrane;0.0139732445711171!GO:0045185;maintenance of protein localization;0.0141369375301533!GO:0005874;microtubule;0.0143139773322924!GO:0006378;mRNA polyadenylation;0.0147402204634925!GO:0009161;ribonucleoside monophosphate metabolic process;0.0150687788830074!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0150687788830074!GO:0000910;cytokinesis;0.0155946417106192!GO:0006278;RNA-dependent DNA replication;0.0155994467992962!GO:0018193;peptidyl-amino acid modification;0.0156164676200956!GO:0004576;oligosaccharyl transferase activity;0.015650737059181!GO:0000086;G2/M transition of mitotic cell cycle;0.0156700767376552!GO:0000738;DNA catabolic process, exonucleolytic;0.0162057868335818!GO:0004843;ubiquitin-specific protease activity;0.0162057868335818!GO:0008022;protein C-terminus binding;0.0162714865264342!GO:0031577;spindle checkpoint;0.0162735254795654!GO:0008047;enzyme activator activity;0.0166407890500955!GO:0016788;hydrolase activity, acting on ester bonds;0.0167804264348252!GO:0004860;protein kinase inhibitor activity;0.0168861759095767!GO:0006368;RNA elongation from RNA polymerase II promoter;0.016913671147188!GO:0033157;regulation of intracellular protein transport;0.0170305932664044!GO:0042306;regulation of protein import into nucleus;0.0170305932664044!GO:0000077;DNA damage checkpoint;0.0171295405089004!GO:0006672;ceramide metabolic process;0.0175377502001917!GO:0000726;non-recombinational repair;0.0179943276884082!GO:0004540;ribonuclease activity;0.0180983466494393!GO:0019079;viral genome replication;0.0186959347968056!GO:0043407;negative regulation of MAP kinase activity;0.018780748056077!GO:0005765;lysosomal membrane;0.018797341660929!GO:0019210;kinase inhibitor activity;0.0189519802627905!GO:0006497;protein amino acid lipidation;0.019540224153619!GO:0006607;NLS-bearing substrate import into nucleus;0.0195749116789168!GO:0046982;protein heterodimerization activity;0.0196113043283685!GO:0000118;histone deacetylase complex;0.0196156816857348!GO:0006308;DNA catabolic process;0.0196815447321437!GO:0006354;RNA elongation;0.0197395317114632!GO:0005096;GTPase activator activity;0.0197620341196744!GO:0008156;negative regulation of DNA replication;0.0199059689188978!GO:0051656;establishment of organelle localization;0.0199266263175213!GO:0006096;glycolysis;0.020221144234827!GO:0008017;microtubule binding;0.020221144234827!GO:0051651;maintenance of cellular localization;0.0202746034677967!GO:0016790;thiolester hydrolase activity;0.0204757930972169!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0205795185564833!GO:0009303;rRNA transcription;0.0205847500021248!GO:0004221;ubiquitin thiolesterase activity;0.0208208033240543!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0208248670928646!GO:0019843;rRNA binding;0.0209455297940877!GO:0031625;ubiquitin protein ligase binding;0.0209941633024445!GO:0030119;AP-type membrane coat adaptor complex;0.0209941633024445!GO:0007265;Ras protein signal transduction;0.0211293937655465!GO:0050852;T cell receptor signaling pathway;0.0211674537277766!GO:0031647;regulation of protein stability;0.0211674537277766!GO:0008250;oligosaccharyl transferase complex;0.0211674537277766!GO:0019900;kinase binding;0.0214974815353096!GO:0005869;dynactin complex;0.0217271388338117!GO:0006519;amino acid and derivative metabolic process;0.0219046464401714!GO:0030522;intracellular receptor-mediated signaling pathway;0.0223243792293903!GO:0046365;monosaccharide catabolic process;0.022699991699576!GO:0009081;branched chain family amino acid metabolic process;0.0229508237423364!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0240323031480187!GO:0045039;protein import into mitochondrial inner membrane;0.0240323031480187!GO:0051287;NAD binding;0.0243875142203025!GO:0016301;kinase activity;0.0245006843985898!GO:0000792;heterochromatin;0.0249622750557534!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0249752229838679!GO:0008180;signalosome;0.0251515628763125!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.025322933889911!GO:0043433;negative regulation of transcription factor activity;0.0253311126787701!GO:0000096;sulfur amino acid metabolic process;0.0254809613116401!GO:0030262;apoptotic nuclear changes;0.0258177675683492!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0261501611446066!GO:0000152;nuclear ubiquitin ligase complex;0.0261755604051765!GO:0016311;dephosphorylation;0.0262026249238905!GO:0050178;phenylpyruvate tautomerase activity;0.0264958101505033!GO:0051224;negative regulation of protein transport;0.0270040184615551!GO:0030695;GTPase regulator activity;0.0271815857463563!GO:0008538;proteasome activator activity;0.0282452211330031!GO:0007253;cytoplasmic sequestering of NF-kappaB;0.0282960377941832!GO:0051101;regulation of DNA binding;0.0293084694731509!GO:0005784;translocon complex;0.0293291849620455!GO:0044438;microbody part;0.0296039514053723!GO:0044439;peroxisomal part;0.0296039514053723!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.029611321949642!GO:0033367;protein localization in mast cell secretory granule;0.029611321949642!GO:0033365;protein localization in organelle;0.029611321949642!GO:0033371;T cell secretory granule organization and biogenesis;0.029611321949642!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.029611321949642!GO:0033375;protease localization in T cell secretory granule;0.029611321949642!GO:0042629;mast cell granule;0.029611321949642!GO:0033377;maintenance of protein localization in T cell secretory granule;0.029611321949642!GO:0033364;mast cell secretory granule organization and biogenesis;0.029611321949642!GO:0033380;granzyme B localization in T cell secretory granule;0.029611321949642!GO:0033379;maintenance of protease localization in T cell secretory granule;0.029611321949642!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.029611321949642!GO:0033368;protease localization in mast cell secretory granule;0.029611321949642!GO:0033366;protein localization in secretory granule;0.029611321949642!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.029611321949642!GO:0033374;protein localization in T cell secretory granule;0.029611321949642!GO:0019901;protein kinase binding;0.0296808400801472!GO:0006506;GPI anchor biosynthetic process;0.0299747060472439!GO:0046128;purine ribonucleoside metabolic process;0.030182145018044!GO:0042278;purine nucleoside metabolic process;0.030182145018044!GO:0016408;C-acyltransferase activity;0.0303120458631742!GO:0008276;protein methyltransferase activity;0.0303629118499844!GO:0030041;actin filament polymerization;0.0303629118499844!GO:0032984;macromolecular complex disassembly;0.0303629118499844!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0307432030325145!GO:0010257;NADH dehydrogenase complex assembly;0.0307432030325145!GO:0033108;mitochondrial respiratory chain complex assembly;0.0307432030325145!GO:0030027;lamellipodium;0.0307815776003676!GO:0044437;vacuolar part;0.0309757919720702!GO:0004721;phosphoprotein phosphatase activity;0.0315025181131622!GO:0033170;DNA-protein loading ATPase activity;0.0315754267048856!GO:0003689;DNA clamp loader activity;0.0315754267048856!GO:0006400;tRNA modification;0.0316459449880961!GO:0030130;clathrin coat of trans-Golgi network vesicle;0.0316459449880961!GO:0012510;trans-Golgi network transport vesicle membrane;0.0316459449880961!GO:0045947;negative regulation of translational initiation;0.0319411391073466!GO:0046112;nucleobase biosynthetic process;0.0321466395704961!GO:0046519;sphingoid metabolic process;0.0321559402378686!GO:0035267;NuA4 histone acetyltransferase complex;0.0323911644838635!GO:0018196;peptidyl-asparagine modification;0.0325000604172461!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0325000604172461!GO:0000793;condensed chromosome;0.0329508113635781!GO:0051220;cytoplasmic sequestering of protein;0.0330928570894143!GO:0006415;translational termination;0.0331814215258482!GO:0042990;regulation of transcription factor import into nucleus;0.0331850584451124!GO:0042991;transcription factor import into nucleus;0.0331850584451124!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0340578414301047!GO:0006596;polyamine biosynthetic process;0.0340752604592964!GO:0019320;hexose catabolic process;0.0341894285568195!GO:0005652;nuclear lamina;0.0346900085898019!GO:0045936;negative regulation of phosphate metabolic process;0.0348401224839533!GO:0043189;H4/H2A histone acetyltransferase complex;0.0348727160104324!GO:0008097;5S rRNA binding;0.0351061985531039!GO:0008624;induction of apoptosis by extracellular signals;0.0351082938927348!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0358247803106201!GO:0046823;negative regulation of nucleocytoplasmic transport;0.0361068580955388!GO:0030131;clathrin adaptor complex;0.0367901461462912!GO:0006505;GPI anchor metabolic process;0.0367901461462912!GO:0004523;ribonuclease H activity;0.0376826384985529!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0376946965472532!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0390538439106989!GO:0004748;ribonucleoside-diphosphate reductase activity;0.039246808019601!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.039246808019601!GO:0031903;microbody membrane;0.039460396174038!GO:0005778;peroxisomal membrane;0.039460396174038!GO:0002757;immune response-activating signal transduction;0.0396485477796132!GO:0050662;coenzyme binding;0.0398087893931475!GO:0046164;alcohol catabolic process;0.0399064608113837!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0399064608113837!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0399064608113837!GO:0009126;purine nucleoside monophosphate metabolic process;0.0399064608113837!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0399064608113837!GO:0050792;regulation of viral reproduction;0.04002542843424!GO:0009083;branched chain family amino acid catabolic process;0.0408939284451277!GO:0031371;ubiquitin conjugating enzyme complex;0.0408949116392165!GO:0003756;protein disulfide isomerase activity;0.0411381647147177!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0411381647147177!GO:0005092;GDP-dissociation inhibitor activity;0.0411381647147177!GO:0007034;vacuolar transport;0.0413537592784644!GO:0019238;cyclohydrolase activity;0.041373314452935!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0413910072049133!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.0414616917150539!GO:0046979;TAP2 binding;0.041780460874195!GO:0046977;TAP binding;0.041780460874195!GO:0046978;TAP1 binding;0.041780460874195!GO:0007094;mitotic cell cycle spindle assembly checkpoint;0.0426759827695176!GO:0006740;NADPH regeneration;0.0427250326531556!GO:0006098;pentose-phosphate shunt;0.0427250326531556!GO:0019902;phosphatase binding;0.0429146409999264!GO:0030508;thiol-disulfide exchange intermediate activity;0.0431689451452335!GO:0006406;mRNA export from nucleus;0.0433192880623176!GO:0043621;protein self-association;0.0434965934767881!GO:0051090;regulation of transcription factor activity;0.0435805137910534!GO:0044262;cellular carbohydrate metabolic process;0.0438098592997664!GO:0042994;cytoplasmic sequestering of transcription factor;0.0445962225310937!GO:0048524;positive regulation of viral reproduction;0.0446637822805585!GO:0008652;amino acid biosynthetic process;0.0446637822805585!GO:0015036;disulfide oxidoreductase activity;0.0448489827854038!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0448578157404731!GO:0008537;proteasome activator complex;0.0451142262242738!GO:0051059;NF-kappaB binding;0.0452925879022527!GO:0043241;protein complex disassembly;0.0453141780510222!GO:0016407;acetyltransferase activity;0.0456125385433392!GO:0000123;histone acetyltransferase complex;0.0463086249078376!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0466876342981992!GO:0046426;negative regulation of JAK-STAT cascade;0.0470196491913894!GO:0004520;endodeoxyribonuclease activity;0.0471740287177083!GO:0017134;fibroblast growth factor binding;0.0472960306507426!GO:0019318;hexose metabolic process;0.0474343686814562!GO:0006778;porphyrin metabolic process;0.0477077910096188!GO:0033013;tetrapyrrole metabolic process;0.0477077910096188!GO:0005744;mitochondrial inner membrane presequence translocase complex;0.0479268314169801!GO:0006644;phospholipid metabolic process;0.0484839420963527!GO:0006458;'de novo' protein folding;0.0484839420963527!GO:0051084;'de novo' posttranslational protein folding;0.0484839420963527!GO:0042158;lipoprotein biosynthetic process;0.0492720533081825!GO:0016569;covalent chromatin modification;0.0494290014744927!GO:0003747;translation release factor activity;0.0497284639345244!GO:0008079;translation termination factor activity;0.0497284639345244!GO:0005083;small GTPase regulator activity;0.049748649392605
 |sample_id=10840
 |sample_note=
@@ Line 76: / Line 99: @@
 |sample_tissue=blood
 |top_motifs=POU2F1..3:2.86225114448;PAX6:2.12931736635;POU5F1:2.04423357147;HOXA9_MEIS1:1.87547667542;IRF1,2:1.54648651776;DMAP1_NCOR{1,2}_SMARC:1.53070719488;NFY{A,B,C}:1.52100213269;IRF7:1.45505876856;CDX1,2,4:1.44033814354;E2F1..5:1.33667351923;PDX1:1.24089425439;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.23078233898;MYB:1.20890857379;NFKB1_REL_RELA:1.14663492546;MYOD1:1.13706961699;HIF1A:1.08286765313;ELK1,4_GABP{A,B1}:1.06757890918;RORA:1.00757208022;ELF1,2,4:0.985128015364;RUNX1..3:0.982464847837;FOXA2:0.975616382536;PBX1:0.952814517455;NKX2-1,4:0.887960121606;PAX8:0.865202601532;ATF4:0.863884098313;NKX6-1,2:0.82866793376;BREu{core}:0.725241684991;RBPJ:0.71509989508;SPI1:0.701162795952;ZNF143:0.700116681668;PAX3,7:0.699220110373;ZBTB16:0.693504157569;YY1:0.650510379519;LMO2:0.642222021172;OCT4_SOX2{dimer}:0.635008405951;NRF1:0.609914356248;CUX2:0.605971994686;bHLH_family:0.604289134814;TGIF1:0.597306775314;POU1F1:0.543741050259;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.500708767675;EVI1:0.477001627604;SPIB:0.41453830225;GATA6:0.405764481845;AIRE:0.403957164732;NFIX:0.39959880829;FOXP3:0.377924093021;IKZF2:0.374046140237;ZEB1:0.334453078523;ATF5_CREB3:0.332787051086;NR5A1,2:0.273778270033;AHR_ARNT_ARNT2:0.257566821602;TLX2:0.234749837988;ETS1,2:0.230903264124;SOX{8,9,10}:0.2208785132;RFX2..5_RFXANK_RFXAP:0.194534053075;ZNF148:0.17870722861;HES1:0.152379841299;CREB1:0.145842703009;HBP1_HMGB_SSRP1_UBTF:0.144698039365;POU3F1..4:0.129370940878;PRRX1,2:0.127678084322;GFI1:0.117529433838;SNAI1..3:0.116209855445;PAX2:0.077449280595;PPARG:0.0668604327589;FOXN1:0.0624922712865;CDC5L:0.0220911049539;NANOG{mouse}:0.011454890754;SOX5:0.00469431050001;NKX2-2,8:0.00352742260944;FOX{F1,F2,J1}:0.00191253612485;MEF2{A,B,C,D}:-0.00518922230694;VSX1,2:-0.00936976944096;DBP:-0.0356229741339;LEF1_TCF7_TCF7L1,2:-0.0508880866071;FOXP1:-0.112851156403;ARID5B:-0.143939228513;HOX{A6,A7,B6,B7}:-0.154067222281;FOSL2:-0.167668901774;STAT5{A,B}:-0.169868946094;TBP:-0.182126823804;HSF1,2:-0.183608880192;ZNF384:-0.186396364863;RXR{A,B,G}:-0.191262891749;CRX:-0.201772961277;PAX4:-0.202628749425;CEBPA,B_DDIT3:-0.208771036482;FOXQ1:-0.210691636723;ESRRA:-0.22554460113;PITX1..3:-0.228170253383;BPTF:-0.233104491092;HNF4A_NR2F1,2:-0.235300695485;SMAD1..7,9:-0.24381005928;SOX17:-0.244203528988;NFE2:-0.255778831115;ESR1:-0.278469086453;POU6F1:-0.281878589674;NFATC1..3:-0.290083410213;EBF1:-0.297597197168;TFDP1:-0.315285090186;HNF1A:-0.329030898696;ATF6:-0.330826709697;SREBF1,2:-0.349656095974;HMGA1,2:-0.357473979254;JUN:-0.380182894655;UFEwm:-0.391858304056;ATF2:-0.392008636577;RXRA_VDR{dimer}:-0.396932994154;ONECUT1,2:-0.404657275293;AR:-0.409426149481;TEF:-0.4124461808;FOXO1,3,4:-0.42406523614;HOX{A5,B5}:-0.43460321116;ZFP161:-0.437358958266;TFAP4:-0.447591437406;TOPORS:-0.460973917818;NR6A1:-0.473789584312;MYFfamily:-0.511487174673;PRDM1:-0.511689869509;GCM1,2:-0.516101880096;HAND1,2:-0.52482444075;SPZ1:-0.536258809966;FOS_FOS{B,L1}_JUN{B,D}:-0.554447201904;STAT2,4,6:-0.55689671594;RFX1:-0.57490529002;GFI1B:-0.581708192848;BACH2:-0.588961059788;NHLH1,2:-0.600154489759;NFIL3:-0.612051060487;HOX{A4,D4}:-0.628802879124;MAFB:-0.638835842802;NKX3-2:-0.650900704277;TAL1_TCF{3,4,12}:-0.668567373859;ALX4:-0.674085030613;STAT1,3:-0.716069728703;TP53:-0.723095308116;EGR1..3:-0.730558751139;EN1,2:-0.738798699961;SOX2:-0.776774916017;FOX{D1,D2}:-0.786161896983;PATZ1:-0.789177195788;RREB1:-0.814574082709;GLI1..3:-0.827130822024;REST:-0.837437917178;MTE{core}:-0.838872882001;HLF:-0.86602632347;NKX3-1:-0.873975242897;PAX5:-0.874320546956;SRF:-0.898388648169;ADNP_IRX_SIX_ZHX:-0.953313242029;GATA4:-0.961239901754;T:-1.01685536879;HIC1:-1.02810191911;MED-1{core}:-1.02812221057;ZNF238:-1.02902639847;NANOG:-1.03061420954;NFE2L2:-1.03753710539;MTF1:-1.06051923416;FOXL1:-1.08945693962;GTF2A1,2:-1.12155946682;ALX1:-1.12963105082;PAX1,9:-1.12993654887;ZIC1..3:-1.13775479452;IKZF1:-1.13783370407;LHX3,4:-1.15625724399;GZF1:-1.16746990872;MYBL2:-1.17598190064;XBP1:-1.18989665209;EP300:-1.20891386243;MZF1:-1.2177062385;SP1:-1.23420438168;TBX4,5:-1.2559353353;FOXD3:-1.26786782295;HMX1:-1.29323806928;NR1H4:-1.30978970559;GTF2I:-1.31759260776;ZBTB6:-1.33535716242;NKX2-3_NKX2-5:-1.34639119422;ZNF423:-1.34892427995;NR3C1:-1.36267289887;TFAP2B:-1.37705689226;KLF4:-1.40461022524;FOXM1:-1.42554028359;NFE2L1:-1.44427150881;MAZ:-1.44891837647;XCPE1{core}:-1.48557028897;TFAP2{A,C}:-1.54434990668;TFCP2:-1.61323651831;TEAD1:-1.61868089366;TLX1..3_NFIC{dimer}:-1.70308564928;FOX{I1,J2}:-1.73202205738
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10840-111E3;search_select_hide=table117:FF:10840-111E3
 }}

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FF:10840-111E3: Difference between revisions

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Latest revision as of 15:08, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0